60S ribosomal protein L22

Overview
Name60S ribosomal protein L22
Smed IDSMED30028140
Length (bp)520
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 60S ribosomal protein L22 (SMED30028140) t-SNE clustered cells

Violin plots show distribution of expression levels for 60S ribosomal protein L22 (SMED30028140) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 60S ribosomal protein L22 (SMED30028140) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 60S ribosomal protein L22 (SMED30028140) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30028140

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 11

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30028140SMESG000001806.1 SmedASXL_018662SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30028140SMESG000001806.1 dd_Smed_v4_230_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30028140SMESG000001806.1 Contig42113newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30028140SMESG000001806.1 Contig42113uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
neoblastSMED30028140SMESG000001806.1 dd_Smed_v6_230_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Human
Match: RPL22 (ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315])

HSP 1 Score: 72.4034 bits (176), Expect = 2.626e-16
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Human
Match: RPL22L1 (ribosomal protein L22 like 1 [Source:HGNC Symbol;Acc:HGNC:27610])

HSP 1 Score: 61.6178 bits (148), Expect = 3.260e-12
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LD T+PVEDGI D   F Q+L +K+K+N K  NLG+ + +++ K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   16 FNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 109
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Human
Match: RPL22L1 (ribosomal protein L22 like 1 [Source:HGNC Symbol;Acc:HGNC:27610])

HSP 1 Score: 61.6178 bits (148), Expect = 3.468e-12
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LD T+PVEDGI D   F Q+L +K+K+N K  NLG+ + +++ K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   15 FNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 108
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Human
Match: RPL22L1 (ribosomal protein L22 like 1 [Source:HGNC Symbol;Acc:HGNC:27610])

HSP 1 Score: 61.2326 bits (147), Expect = 6.793e-12
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LD T+PVEDGI D   F Q+L +K+K+N K  NLG+ + +++ K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   36 FNLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERFKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 129
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Human
Match: RPL22 (ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC:10315])

HSP 1 Score: 47.7506 bits (112), Expect = 2.800e-7
Identity = 38/58 (65.52%), Postives = 48/58 (82.76%), Query Frame = 3 
Query:  273 GDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            G  +++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   25 GGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 82
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Celegans
Match: rpl-22 (60S ribosomal protein L22 [Source:UniProtKB/Swiss-Prot;Acc:P52819])

HSP 1 Score: 49.6766 bits (117), Expect = 4.088e-8
Identity = 49/96 (51.04%), Postives = 73/96 (76.04%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXX-XGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYFN 449
            F ++C NPVEDGIL I     +LN+KIK+N K  +   +++ ++  K  ++V + VPFSKRYLKYL+KK+LK+++LRD+LRVVA +K +YE+RYF+
Sbjct:   23 FNVECKNPVEDGILRIEDLEAFLNEKIKVNGKTGHLAANNVKVEVAKSKVSVVSEVPFSKRYLKYLTKKYLKRNSLRDWLRVVAVNKNTYEVRYFH 118
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Fly
Match: RpL22 (gene:FBgn0015288 transcript:FBtr0070148)

HSP 1 Score: 62.7734 bits (151), Expect = 6.452e-12
Identity = 49/94 (52.13%), Postives = 76/94 (80.85%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F +DCTN  ED I+D++ F +Y+  ++K+N K+NNLG++++ ++ K  + V ++V FSK YLKYL+KK+LKK++LRD++RVVA +K+SYELRYF
Sbjct:  193 FTIDCTNIAEDSIMDVADFEKYIKARLKVNGKVNNLGNNVTFERSKLKLIVSSDVHFSKAYLKYLTKKYLKKNSLRDWIRVVANEKDSYELRYF 286
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Zebrafish
Match: rpl22 (ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276])

HSP 1 Score: 73.559 bits (179), Expect = 1.047e-16
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   35 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 129
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Zebrafish
Match: rpl22 (ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276])

HSP 1 Score: 73.559 bits (179), Expect = 1.047e-16
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   35 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 129
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Zebrafish
Match: rpl22l1 (ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-GENE-060804-3])

HSP 1 Score: 66.6254 bits (161), Expect = 3.106e-14
Identity = 57/94 (60.64%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGILD + F  +L +K+K+N K  NLG+ + + + K  I V +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKESYELRYF
Sbjct:   20 FTLDCTHPVEDGILDSANFETFLKEKVKVNGKTGNLGNVVQIVRQKNKINVTSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKESYELRYF 113
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Xenopus
Match: rpl22 (ribosomal protein L22 [Source:NCBI gene;Acc:549409])

HSP 1 Score: 72.4034 bits (176), Expect = 2.331e-16
Identity = 61/95 (64.21%), Postives = 78/95 (82.11%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L+D+IK+N K+ NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Xenopus
Match: rpl22 (ribosomal protein L22 [Source:NCBI gene;Acc:549409])

HSP 1 Score: 72.4034 bits (176), Expect = 3.083e-16
Identity = 61/95 (64.21%), Postives = 78/95 (82.11%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L+D+IK+N K+ NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   26 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 120
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Xenopus
Match: rpl22l1 (ribosomal protein L22 like 1 [Source:NCBI gene;Acc:496910])

HSP 1 Score: 61.2326 bits (147), Expect = 4.637e-12
Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 3 
Query:  162 TFALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            +F LD T+PVEDGI D   F Q+L ++IK+N K  NLG  + + + K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   14 SFTLDLTHPVEDGIFDSVNFEQFLKERIKVNGKTGNLGSIVHIGRLKSKITVSSEKKFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 108
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Xenopus
Match: rpl22l1 (ribosomal protein L22 like 1 [Source:NCBI gene;Acc:496910])

HSP 1 Score: 61.2326 bits (147), Expect = 5.155e-12
Identity = 56/95 (58.95%), Postives = 71/95 (74.74%), Query Frame = 3 
Query:  162 TFALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            +F LD T+PVEDGI D   F Q+L ++IK+N K  NLG  + + + K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   26 SFTLDLTHPVEDGIFDSVNFEQFLKERIKVNGKTGNLGSIVHIGRLKSKITVSSEKKFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 120
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Xenopus
Match: rpl22 (ribosomal protein L22 [Source:NCBI gene;Acc:549409])

HSP 1 Score: 59.3066 bits (142), Expect = 2.070e-11
Identity = 45/102 (44.12%), Postives = 61/102 (59.80%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKK-------DKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L+D+IK+N K+ NLG  + S+++       +KY+  +Q N                    LRD+LRVVA  KESYELRYF
Sbjct:   26 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKIFVLPEKYITGLQKN-------------------NLRDWLRVVANSKESYELRYF 108
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Mouse
Match: Rpl22 (ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:99262])

HSP 1 Score: 72.7886 bits (177), Expect = 1.656e-16
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Mouse
Match: Rpl22 (ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:99262])

HSP 1 Score: 72.7886 bits (177), Expect = 1.656e-16
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Mouse
Match: Rpl22 (ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:99262])

HSP 1 Score: 72.7886 bits (177), Expect = 1.656e-16
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Mouse
Match: Rpl22l1 (ribosomal protein L22 like 1 [Source:MGI Symbol;Acc:MGI:1915278])

HSP 1 Score: 61.2326 bits (147), Expect = 2.789e-12
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LD T+PVEDGI D   F Q+L +K+K+N K  NLG+ + +++ K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   15 FHLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERLKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 108
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Mouse
Match: Rpl22l1 (ribosomal protein L22 like 1 [Source:MGI Symbol;Acc:MGI:1915278])

HSP 1 Score: 61.2326 bits (147), Expect = 2.793e-12
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LD T+PVEDGI D   F Q+L +K+K+N K  NLG+ + +++ K  ITV +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   16 FHLDLTHPVEDGIFDSGNFEQFLREKVKVNGKTGNLGNVVHIERLKNKITVVSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 109
[Close]
BLAST of 60S ribosomal protein L22 vs. UniProt/SwissProt
Match: sp|Q90YU6|RL22_ICTPU (60S ribosomal protein L22 OS=Ictalurus punctatus OX=7998 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 9.662e-16
Identity = 59/95 (62.11%), Postives = 77/95 (81.05%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + S+++ K  ITV +++PFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. UniProt/SwissProt
Match: sp|P67985|RL22_PIG (60S ribosomal protein L22 OS=Sus scrofa OX=9823 GN=RPL22 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-15
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. UniProt/SwissProt
Match: sp|P67984|RL22_MOUSE (60S ribosomal protein L22 OS=Mus musculus OX=10090 GN=Rpl22 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-15
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. UniProt/SwissProt
Match: sp|Q4R5I3|RL22_MACFA (60S ribosomal protein L22 OS=Macaca fascicularis OX=9541 GN=RPL22 PE=2 SV=3)

HSP 1 Score: 72.7886 bits (177), Expect = 1.158e-15
Identity = 59/95 (62.11%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVTIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. UniProt/SwissProt
Match: sp|Q28IL6|RL22_XENTR (60S ribosomal protein L22 OS=Xenopus tropicalis OX=8364 GN=rpl22 PE=2 SV=3)

HSP 1 Score: 72.4034 bits (176), Expect = 1.235e-15
Identity = 61/95 (64.21%), Postives = 78/95 (82.11%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L+D+IK+N K+ NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   21 FTLDCTHPVEDGIMDAANFEQFLHDRIKVNGKVGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 115
[Close]
BLAST of 60S ribosomal protein L22 vs. TrEMBL
Match: H3B9P1 (Uncharacterized protein OS=Latimeria chalumnae OX=7897 GN=RPL22 PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 9.055e-16
Identity = 59/94 (62.77%), Postives = 76/94 (80.85%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG ++++++ K  ITV A VP SKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   18 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKTGNLGGAVTIERSKSKITVTAEVPLSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 111
[Close]
BLAST of 60S ribosomal protein L22 vs. TrEMBL
Match: A0A401P2Y0 (Uncharacterized protein OS=Scyliorhinus torazame OX=75743 GN=scyTo_0013707 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.328e-15
Identity = 60/94 (63.83%), Postives = 78/94 (82.98%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D S F Q+L ++IK+N K  NLG+ ++++++K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   20 FTLDCTHPVEDGIMDASNFEQFLQERIKVNGKAGNLGNVVTIERNKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 113
[Close]
BLAST of 60S ribosomal protein L22 vs. TrEMBL
Match: A0A401T2V5 (Uncharacterized protein OS=Chiloscyllium punctatum OX=137246 GN=chiPu_0015472 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.648e-15
Identity = 60/94 (63.83%), Postives = 78/94 (82.98%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D S F Q+L ++IK+N K  NLG+ ++++++K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   29 FTLDCTHPVEDGIMDASNFEQFLQERIKVNGKAGNLGNVVTIERNKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANSKESYELRYF 122
[Close]
BLAST of 60S ribosomal protein L22 vs. TrEMBL
Match: Q4GXF2 (Ribosomal protein L22e (Fragment) OS=Sphaerius sp. APV-2005 OX=292460 GN=rpL22e PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 6.091e-15
Identity = 59/94 (62.77%), Postives = 76/94 (80.85%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F +DCT+PVED I+D+S F  YL ++IK+N K  N G+++SL++ K  ITV A VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  K+SYELRYF
Sbjct:   14 FTVDCTHPVEDNIMDVSNFEHYLKERIKVNGKTGNFGNNVSLERQKTKITVNAEVPFSKRYLKYLTKKYLKKNNLRDWLRVVASGKDSYELRYF 107
[Close]
BLAST of 60S ribosomal protein L22 vs. TrEMBL
Match: A0A3B3URF6 (Ribosomal protein L22 OS=Poecilia latipinna OX=48699 PE=4 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 7.790e-15
Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 3 
Query:  159 STFALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDS-LSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            STF LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG   +S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   27 STFTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 123
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Cavefish
Match: rpl22 (ribosomal protein L22 [Source:NCBI gene;Acc:103046662])

HSP 1 Score: 73.9442 bits (180), Expect = 4.166e-17
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  L ++++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   22 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGLVTIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 116
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Cavefish
Match: rpl22 (60S ribosomal protein L22 [Source:NCBI gene;Acc:103047485])

HSP 1 Score: 72.7886 bits (177), Expect = 1.664e-16
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   35 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVTSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 129
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Cavefish
Match: rpl22l1 (ribosomal protein L22 like 1 [Source:NCBI gene;Acc:103025320])

HSP 1 Score: 64.6994 bits (156), Expect = 1.316e-13
Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGILD + F  +L +K+K+N K  NL   + + + K  I+V +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKESYELRYF
Sbjct:   21 FTLDCTHPVEDGILDSANFETFLREKVKVNGKTGNLSGVVQIARQKNKISVTSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKESYELRYF 114
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Cavefish
Match: rpl22l1 (ribosomal protein L22 like 1 [Source:NCBI gene;Acc:103025320])

HSP 1 Score: 64.3142 bits (155), Expect = 1.556e-13
Identity = 56/94 (59.57%), Postives = 71/94 (75.53%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGILD + F  +L +K+K+N K  NL   + + + K  I+V +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKESYELRYF
Sbjct:   20 FTLDCTHPVEDGILDSANFETFLREKVKVNGKTGNLSGVVQIARQKNKISVTSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKESYELRYF 113
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Sea Lamprey
Match: rpl22 (ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276])

HSP 1 Score: 65.4698 bits (158), Expect = 1.434e-14
Identity = 53/97 (54.64%), Postives = 75/97 (77.32%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGD--SLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYFN 449
            F LDCT+PVEDGI+D + F Q+L ++IK++ K   + +  ++++++ K  ITV + +PFSKRYLKYL+KK+LKK+ LRD+LRVVA  K SYELRYF 
Sbjct:   27 FTLDCTHPVEDGIMDSANFEQFLKERIKVDGKTGKVSEHSAVTVERSKSKITVSSEIPFSKRYLKYLTKKYLKKNNLRDWLRVVAASKVSYELRYFQ 123
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Nematostella
Match: EDO34733 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SNH4])

HSP 1 Score: 68.5514 bits (166), Expect = 1.512e-15
Identity = 55/94 (58.51%), Postives = 77/94 (81.91%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F +DCT+PVEDGI+D++ F Q+L+D+IK+  K NNLG  +++++ K  + V +++PFSKRYLKYL+KK+LKK+ LRD+LRVVA D  SYELRYF
Sbjct:    9 FTVDCTHPVEDGIMDVANFEQFLHDRIKVQGKTNNLGSEVTIERMKNKLNVVSDIPFSKRYLKYLTKKYLKKNNLRDWLRVVAADHTSYELRYF 102
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Medaka
Match: ENSORLT00000024154.2 (60S ribosomal protein L22 [Source:NCBI gene;Acc:101175136])

HSP 1 Score: 73.559 bits (179), Expect = 6.875e-17
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L ++IK+N K  NLG  + S+++ K  ITV + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   24 FTLDCTHPVEDGIMDAANFEQFLQERIKVNGKAGNLGGGVVSIERSKSKITVSSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 118
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Medaka
Match: rpl22 (60S ribosomal protein L22 [Source:NCBI gene;Acc:101166956])

HSP 1 Score: 72.0182 bits (175), Expect = 2.304e-16
Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSL-SLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LDCT+PVEDGI+D + F Q+L  +IK+N K   LG  + S+++ K  I V + VPFSKRYLKYL+KK+LKK+ LRD+LRVVA  KESYELRYF
Sbjct:   23 FTLDCTHPVEDGIMDAANFEQFLQQRIKVNGKAGTLGGGVVSIERSKSKIAVNSEVPFSKRYLKYLTKKYLKKNNLRDWLRVVANTKESYELRYF 117
[Close]
BLAST of 60S ribosomal protein L22 vs. Ensembl Medaka
Match: rpl22l1 (ribosomal protein L22 like 1 [Source:NCBI gene;Acc:101155233])

HSP 1 Score: 60.4622 bits (145), Expect = 6.013e-12
Identity = 55/94 (58.51%), Postives = 71/94 (75.53%), Query Frame = 3 
Query:  165 FALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYF 446
            F LD T+PVEDGILD + F  +L ++IK+N K  NLG+ + + + K  I V +   FSKRYLKYL+KK+LKK+ LRD+LRVVA DKE+YELRYF
Sbjct:   20 FTLDLTHPVEDGILDSANFETFLKERIKVNGKTGNLGNIVQVGRMKNKINVTSEKQFSKRYLKYLTKKYLKKNNLRDWLRVVASDKETYELRYF 113
[Close]
BLAST of 60S ribosomal protein L22 vs. Planmine SMEST
Match: SMESG000001806.1 (SMESG000001806.1)

HSP 1 Score: 131.339 bits (329), Expect = 1.282e-39
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 3 
Query:  111 MPNXXXXXXXXXXXXXSTFALDCTNPVEDGILDISVFHQYXXXXXXXXXXXXXXGDSLSLKKDKYVITVQANVPXXXXXXXXXXXXXXXXHTLRDYLRVVAKDKESYELRYFN 449
            MPNIKIVKKTKPKKKVSTFALDCTNPVEDGILDISVFHQYLNDKIKINNKLNNLGDSLSLKKDKYVITVQANVPFSKRYLKYLSKKFLKKHTLRDYLRVVAKDKESYELRYFN
Sbjct:    1 MPNIKIVKKTKPKKKVSTFALDCTNPVEDGILDISVFHQYLNDKIKINNKLNNLGDSLSLKKDKYVITVQANVPFSKRYLKYLSKKFLKKHTLRDYLRVVAKDKESYELRYFN 113
The following BLAST results are available for this feature:
BLAST of 60S ribosomal protein L22 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPL222.626e-1662.11ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC... [more]
RPL22L13.260e-1259.57ribosomal protein L22 like 1 [Source:HGNC Symbol;A... [more]
RPL22L13.468e-1259.57ribosomal protein L22 like 1 [Source:HGNC Symbol;A... [more]
RPL22L16.793e-1259.57ribosomal protein L22 like 1 [Source:HGNC Symbol;A... [more]
RPL222.800e-765.52ribosomal protein L22 [Source:HGNC Symbol;Acc:HGNC... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl-224.088e-851.0460S ribosomal protein L22 [Source:UniProtKB/Swiss... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
RpL226.452e-1252.13gene:FBgn0015288 transcript:FBtr0070148[more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3
Match NameE-valueIdentityDescription
rpl221.047e-1663.16ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-05... [more]
rpl221.047e-1663.16ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-05... [more]
rpl22l13.106e-1460.64ribosomal protein L22-like 1 [Source:ZFIN;Acc:ZDB-... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rpl222.331e-1664.21ribosomal protein L22 [Source:NCBI gene;Acc:549409... [more]
rpl223.083e-1664.21ribosomal protein L22 [Source:NCBI gene;Acc:549409... [more]
rpl22l14.637e-1258.95ribosomal protein L22 like 1 [Source:NCBI gene;Acc... [more]
rpl22l15.155e-1258.95ribosomal protein L22 like 1 [Source:NCBI gene;Acc... [more]
rpl222.070e-1144.12ribosomal protein L22 [Source:NCBI gene;Acc:549409... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Rpl221.656e-1662.11ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:9... [more]
Rpl221.656e-1662.11ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:9... [more]
Rpl221.656e-1662.11ribosomal protein L22 [Source:MGI Symbol;Acc:MGI:9... [more]
Rpl22l12.789e-1259.57ribosomal protein L22 like 1 [Source:MGI Symbol;Ac... [more]
Rpl22l12.793e-1259.57ribosomal protein L22 like 1 [Source:MGI Symbol;Ac... [more]
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BLAST of 60S ribosomal protein L22 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q90YU6|RL22_ICTPU9.662e-1662.1160S ribosomal protein L22 OS=Ictalurus punctatus O... [more]
sp|P67985|RL22_PIG1.158e-1562.1160S ribosomal protein L22 OS=Sus scrofa OX=9823 GN... [more]
sp|P67984|RL22_MOUSE1.158e-1562.1160S ribosomal protein L22 OS=Mus musculus OX=10090... [more]
sp|Q4R5I3|RL22_MACFA1.158e-1562.1160S ribosomal protein L22 OS=Macaca fascicularis O... [more]
sp|Q28IL6|RL22_XENTR1.235e-1564.2160S ribosomal protein L22 OS=Xenopus tropicalis OX... [more]
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BLAST of 60S ribosomal protein L22 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
H3B9P19.055e-1662.77Uncharacterized protein OS=Latimeria chalumnae OX=... [more]
A0A401P2Y01.328e-1563.83Uncharacterized protein OS=Scyliorhinus torazame O... [more]
A0A401T2V51.648e-1563.83Uncharacterized protein OS=Chiloscyllium punctatum... [more]
Q4GXF26.091e-1562.77Ribosomal protein L22e (Fragment) OS=Sphaerius sp.... [more]
A0A3B3URF67.790e-1563.92Ribosomal protein L22 OS=Poecilia latipinna OX=486... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
rpl224.166e-1763.16ribosomal protein L22 [Source:NCBI gene;Acc:103046... [more]
rpl221.664e-1663.1660S ribosomal protein L22 [Source:NCBI gene;Acc:10... [more]
rpl22l11.316e-1359.57ribosomal protein L22 like 1 [Source:NCBI gene;Acc... [more]
rpl22l11.556e-1359.57ribosomal protein L22 like 1 [Source:NCBI gene;Acc... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rpl221.434e-1454.64ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-05... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 60S ribosomal protein L22 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO347331.512e-1558.51Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 60S ribosomal protein L22 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSORLT00000024154.26.875e-1763.1660S ribosomal protein L22 [Source:NCBI gene;Acc:10... [more]
rpl222.304e-1661.0560S ribosomal protein L22 [Source:NCBI gene;Acc:10... [more]
rpl22l16.013e-1258.51ribosomal protein L22 like 1 [Source:NCBI gene;Acc... [more]
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BLAST of 60S ribosomal protein L22 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000001806.11.282e-39100.00SMESG000001806.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30028140 ID=SMED30028140|Name=60S ribosomal protein L22|organism=Schmidtea mediterranea sexual|type=transcript|length=520bp
TTTGATTAATAGTTTTGATATAATTAATTACTAATATTCAAATAATTGTG
AAATAAGCATACCAATTTTGTTTAAATAAATTAGACGTTATCATCATAGT
ATATTTTAAAATGCCTAATATCAAGATTGTAAAAAAAACTAAACCAAAGA
AGAAAGTATCTACTTTCGCTCTTGATTGCACAAATCCCGTTGAAGATGGA
ATTTTGGACATTTCTGTATTTCACCAATATTTGAATGACAAGATTAAAAT
TAATAATAAATTGAACAATTTGGGCGATTCACTCAGTCTTAAAAAGGACA
AATATGTTATCACCGTTCAAGCTAATGTTCCATTTTCAAAAAGATATTTG
AAATATTTGTCAAAGAAATTTTTGAAGAAGCACACTCTCAGAGATTATTT
GAGAGTTGTAGCAAAGGACAAAGAGTCATACGAATTGAGATATTTCAATG
TTGCTGACGGAGCTGAAGACGACGAAGAAGTTGAAGAATAAATGTGTTAT
TAAATACAAACTTTTTGGAT
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protein sequence of SMED30028140-orf-1

>SMED30028140-orf-1 ID=SMED30028140-orf-1|Name=SMED30028140-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=127bp
MPNIKIVKKTKPKKKVSTFALDCTNPVEDGILDISVFHQYLNDKIKINNK
LNNLGDSLSLKKDKYVITVQANVPFSKRYLKYLSKKFLKKHTLRDYLRVV
AKDKESYELRYFNVADGAEDDEEVEE*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR038526Ribosomal_L22e_sf
IPR002671Ribosomal_L22e
Vocabulary: biological process
TermDefinition
GO:0006412translation
GO:0016192vesicle-mediated transport
Vocabulary: molecular function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: cellular component
TermDefinition
GO:0005622intracellular
GO:0005840ribosome
GO:0016020membrane
GO:0016021integral component of membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038526Ribosomal protein L22e superfamilyGENE3DG3DSA:3.30.1360.210coord: 5..126
e-value: 3.0E-45
score: 155.0
IPR002671Ribosomal protein L22ePFAMPF01776Ribosomal_L22ecoord: 14..121
e-value: 1.9E-42
score: 144.1
IPR002671Ribosomal protein L22ePANTHERPTHR1006460S RIBOSOMAL PROTEIN L22coord: 7..123