tudor-1

Overview
Nametudor-1 (AFJ24788.1)
Smed IDSMED30028056
Length (bp)2191
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of tudor-1 (SMED30028056) t-SNE clustered cells

Violin plots show distribution of expression levels for tudor-1 (SMED30028056) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of tudor-1 (SMED30028056) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for tudor-1 (SMED30028056) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30028056

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 20

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
gutSMED30028056h1SMcG0007119 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30028056h1SMcG0007119 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30028056h1SMcG0007119 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30028056h1SMcG0007119 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30028056h1SMcG0007119 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30028056h1SMcG0007119 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
gutSMED30028056h1SMcG0009633 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30028056h1SMcG0009633 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30028056h1SMcG0009633 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30028056h1SMcG0009633 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30028056h1SMcG0009633 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30028056h1SMcG0009633 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
gutSMED30028056h1SMcG0009632 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
gutSMED30028056h1SMcG0009632 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30028056h1SMcG0009632 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
dorsal ventral margin of the whole animalSMED30028056h1SMcG0009632 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
intestinal phagocyteSMED30028056h1SMcG0009632 Contig1138uc_Smed_v2PMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
intestinal phagocyteSMED30028056h1SMcG0009632 Contig1138newmark_estsPMID:23079596
Forsthoefel et al., 2012		FACS sorted cell population asexual adult cDNA to DNA expression microarray evidence
X1 cellSMED30028056h1SMcG0007119 SmedASXL_015435SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30028056h1SMcG0007119 SmedASXL_015435SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of tudor-1 vs. Ensembl Human
Match: TDRD1 (tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712])

HSP 1 Score: 73.559 bits (179), Expect = 1.019e-12
Identity = 87/368 (23.64%), Postives = 160/368 (43.48%), Query Frame = 2 
Query:   41 KSMKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKV--GDIYAAIYPQDKMFYRVKILQILDFE--KVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMK---------IIQELCTDDVVITIENKT-----RMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPE-CDIYVHEFSK--------NSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
            +S++  K   +KG  T +++ G  Y        LE       ++ L+ S          Y  + E DY    G++  A Y  D+ + R  I+Q +D +  K  V ++DYGN EIIP   +  L   I +  P A+ C + ++ +  E  +           ++++ C+  +V  +E +       +++ N G L+++++I +            Y ++ +  +   E+ D        SD E + ++TT  + VV       +  D    V+  +V  E C +  H  +          S  +L  LQA + +  ++   R SD      ++  AQFSED+ WYR  ++++ S    LV Y+D+GN E
Sbjct:  256 RSLQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEY------MNQLSAS------LKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRA-IIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLIEM-----------GYGLKPSGQDSKKENAD-------QSDPEDVGKMTTENNIVV-------DKSDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPPR-SDFYPAIGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFE 583
[Close]
BLAST of tudor-1 vs. Ensembl Human
Match: TDRD1 (tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712])

HSP 1 Score: 73.559 bits (179), Expect = 1.097e-12
Identity = 87/368 (23.64%), Postives = 160/368 (43.48%), Query Frame = 2 
Query:   41 KSMKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKV--GDIYAAIYPQDKMFYRVKILQILDFE--KVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMK---------IIQELCTDDVVITIENKT-----RMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPE-CDIYVHEFSK--------NSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
            +S++  K   +KG  T +++ G  Y        LE       ++ L+ S          Y  + E DY    G++  A Y  D+ + R  I+Q +D +  K  V ++DYGN EIIP   +  L   I +  P A+ C + ++ +  E  +           ++++ C+  +V  +E +       +++ N G L+++++I +            Y ++ +  +   E+ D        SD E + ++TT  + VV       +  D    V+  +V  E C +  H  +          S  +L  LQA + +  ++   R SD      ++  AQFSED+ WYR  ++++ S    LV Y+D+GN E
Sbjct:  256 RSLQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEY------MNQLSAS------LKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRA-IIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLIEM-----------GYGLKPSGQDSKKENAD-------QSDPEDVGKMTTENNIVV-------DKSDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPPR-SDFYPAIGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFE 583
[Close]
BLAST of tudor-1 vs. Ensembl Human
Match: TDRD1 (tudor domain containing 1 [Source:HGNC Symbol;Acc:HGNC:11712])

HSP 1 Score: 73.1738 bits (178), Expect = 1.280e-12
Identity = 86/366 (23.50%), Postives = 162/366 (44.26%), Query Frame = 2 
Query:   41 KSMKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFE--KVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMK---------IIQELCTDDVVITIENKT-----RMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPE-CDIYVHEFSK--------NSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
            +S++  K   +KG  T +++ G  Y        LE     S   +L  +Y+  N   ++Y+ ++      G++  A Y  D+ + R  I+Q +D +  K  V ++DYGN EIIP   +  L   I +  P A+ C + ++ +  E  +           ++++ C+  +V  +E +       +++ N G L+++++I +      GY ++                D+     + SD E + ++TT  + VV       +  D    V+  +V  E C +  H  +          S  +L  LQA + +  ++   R SD      ++  AQFSED+ WYR  ++++ S    LV Y+D+GN E
Sbjct:  256 RSLQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEYMNQLSA--SLKETYA--NVHEKDYIPVK------GEVCIAKYTVDQTWNRA-IIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLIEM------GYGLK------------PSGQDSKKENADQSDPEDVGKMTTENNIVV-------DKSDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPPR-SDFYPAIGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFE 583
[Close]
BLAST of tudor-1 vs. Ensembl Human
Match: STK31 (serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407])

HSP 1 Score: 53.9138 bits (128), Expect = 6.217e-8
Identity = 20/51 (39.22%), Postives = 38/51 (74.51%), Query Frame = 2 
Query:  257 IYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQI 409
            IY  ++ +D+ +YR K+L+I+  EK LV ++DYGNTEI+ ++++  +P ++
Sbjct:   40 IYGGLFSEDQCWYRCKVLKIISVEKCLVRYIDYGNTEILNRSDIVEIPLEL 90
[Close]
BLAST of tudor-1 vs. Ensembl Human
Match: STK31 (serine/threonine kinase 31 [Source:HGNC Symbol;Acc:HGNC:11407])

HSP 1 Score: 53.9138 bits (128), Expect = 8.150e-8
Identity = 20/51 (39.22%), Postives = 38/51 (74.51%), Query Frame = 2 
Query:  257 IYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQI 409
            IY  ++ +D+ +YR K+L+I+  EK LV ++DYGNTEI+ ++++  +P ++
Sbjct:   61 IYGGLFSEDQCWYRCKVLKIISVEKCLVRYIDYGNTEILNRSDIVEIPLEL 111
[Close]
BLAST of tudor-1 vs. Ensembl Fly
Match: tud (gene:FBgn0003891 transcript:FBtr0071582)

HSP 1 Score: 53.5286 bits (127), Expect = 8.450e-7
Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 2 
Query:   32 LCE-KSMKFAKKTTL----KGRFTHYENNGYIYFN-SKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKI 445
            LC+ K  K A K +L    K   TH EN   IY   S+ D+ ++  C     + LN S           L  +     V D+    +  D  FYR +IL++L+ ++  V  +DYGNT ++ K  L  LP + ++IKP+A +C +
Sbjct: 1963 LCQRKEPKEASKESLAVTTKAIITHVENTSRIYLQFSEKDSLMDIIC-----EKLNGSK----------LQPKTEKAAVDDMCVVQFADDLEFYRSRILEVLEDDQYKVILIDYGNTTVVDK--LYELPQEFTLIKPVAEICSM 2089
[Close]
BLAST of tudor-1 vs. Ensembl Fly
Match: tud (gene:FBgn0003891 transcript:FBtr0342870)

HSP 1 Score: 53.5286 bits (127), Expect = 8.521e-7
Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 2 
Query:   32 LCE-KSMKFAKKTTL----KGRFTHYENNGYIYFN-SKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKI 445
            LC+ K  K A K +L    K   TH EN   IY   S+ D+ ++  C     + LN S           L  +     V D+    +  D  FYR +IL++L+ ++  V  +DYGNT ++ K  L  LP + ++IKP+A +C +
Sbjct: 1960 LCQRKEPKEASKESLAVTTKAIITHVENTSRIYLQFSEKDSLMDIIC-----EKLNGSK----------LQPKTEKAAVDDMCVVQFADDLEFYRSRILEVLEDDQYKVILIDYGNTTVVDK--LYELPQEFTLIKPVAEICSM 2086
[Close]
BLAST of tudor-1 vs. Ensembl Xenopus
Match: TDRD1 (tudor domain containing 1 [Source:NCBI gene;Acc:100216261])

HSP 1 Score: 57.7658 bits (138), Expect = 7.120e-8
Identity = 66/287 (23.00%), Postives = 121/287 (42.16%), Query Frame = 2 
Query:  248 VGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENK---TRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSM---DKVVSTHTVSSEHYDYSKTVIITSVSPECDIY-VHEF------SKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
             G+I +A++ +D  +YR  +L  +  +  LV +VD+GN E +P + L P+P ++      A+ C +  ++        K   +  T  +   + NK    R+   +EG LM  L+   ++   +   I   LI + +A       D       D  + G +  T      D        +S      + V ++     C +Y   EF       K++K+ L  L   +G+  +K     S   +N +   +  A FS D  WYR  ++  +   G  V+++D+GN+E
Sbjct:  459 AGEICSALFTEDNRWYRATVLDRVSEDSALVGYVDFGNVEHLPVSRLRPIPARMLAFPLQAIQCSLEGVRPAS-----KTWTKEATTKMASLVANKMITVRVITESEGSLMVELLDGSVNPELD---IARQLILAGLA------VDKEAGVGMDEGSSGALAGTGGELMDDSGAKPGQWTSAELPLGRAVDVSV----CMLYSPGEFFCQLCNEKDAKS-LTELNRSLGQHCQKG----SATQYNPKAGKICCAFFSGDGNWYRAMVMGVEQK-GTKVRFMDYGNTE 721
[Close]
BLAST of tudor-1 vs. Ensembl Xenopus
Match: TDRD1 (tudor domain containing 1 [Source:NCBI gene;Acc:100216261])

HSP 1 Score: 57.7658 bits (138), Expect = 7.146e-8
Identity = 66/287 (23.00%), Postives = 121/287 (42.16%), Query Frame = 2 
Query:  248 VGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENK---TRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSM---DKVVSTHTVSSEHYDYSKTVIITSVSPECDIY-VHEF------SKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
             G+I +A++ +D  +YR  +L  +  +  LV +VD+GN E +P + L P+P ++      A+ C +  ++        K   +  T  +   + NK    R+   +EG LM  L+   ++   +   I   LI + +A       D       D  + G +  T      D        +S      + V ++     C +Y   EF       K++K+ L  L   +G+  +K     S   +N +   +  A FS D  WYR  ++  +   G  V+++D+GN+E
Sbjct:  477 AGEICSALFTEDNRWYRATVLDRVSEDSALVGYVDFGNVEHLPVSRLRPIPARMLAFPLQAIQCSLEGVRPAS-----KTWTKEATTKMASLVANKMITVRVITESEGSLMVELLDGSVNPELD---IARQLILAGLA------VDKEAGVGMDEGSSGALAGTGGELMDDSGAKPGQWTSAELPLGRAVDVSV----CMLYSPGEFFCQLCNEKDAKS-LTELNRSLGQHCQKG----SATQYNPKAGKICCAFFSGDGNWYRAMVMGVEQK-GTKVRFMDYGNTE 739
[Close]
BLAST of tudor-1 vs. Ensembl Xenopus
Match: TDRD1 (tudor domain containing 1 [Source:NCBI gene;Acc:100216261])

HSP 1 Score: 57.7658 bits (138), Expect = 7.310e-8
Identity = 66/287 (23.00%), Postives = 121/287 (42.16%), Query Frame = 2 
Query:  248 VGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENK---TRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSM---DKVVSTHTVSSEHYDYSKTVIITSVSPECDIY-VHEF------SKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
             G+I +A++ +D  +YR  +L  +  +  LV +VD+GN E +P + L P+P ++      A+ C +  ++        K   +  T  +   + NK    R+   +EG LM  L+   ++   +   I   LI + +A       D       D  + G +  T      D        +S      + V ++     C +Y   EF       K++K+ L  L   +G+  +K     S   +N +   +  A FS D  WYR  ++  +   G  V+++D+GN+E
Sbjct:  424 AGEICSALFTEDNRWYRATVLDRVSEDSALVGYVDFGNVEHLPVSRLRPIPARMLAFPLQAIQCSLEGVRPAS-----KTWTKEATTKMASLVANKMITVRVITESEGSLMVELLDGSVNPELD---IARQLILAGLA------VDKEAGVGMDEGSSGALAGTGGELMDDSGAKPGQWTSAELPLGRAVDVSV----CMLYSPGEFFCQLCNEKDAKS-LTELNRSLGQHCQKG----SATQYNPKAGKICCAFFSGDGNWYRAMVMGVEQK-GTKVRFMDYGNTE 686
[Close]
BLAST of tudor-1 vs. Ensembl Xenopus
Match: TDRD1 (tudor domain containing 1 [Source:NCBI gene;Acc:100216261])

HSP 1 Score: 57.3806 bits (137), Expect = 7.875e-8
Identity = 66/287 (23.00%), Postives = 121/287 (42.16%), Query Frame = 2 
Query:  248 VGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENK---TRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSM---DKVVSTHTVSSEHYDYSKTVIITSVSPECDIY-VHEF------SKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
             G+I +A++ +D  +YR  +L  +  +  LV +VD+GN E +P + L P+P ++      A+ C +  ++        K   +  T  +   + NK    R+   +EG LM  L+   ++   +   I   LI + +A       D       D  + G +  T      D        +S      + V ++     C +Y   EF       K++K+ L  L   +G+  +K     S   +N +   +  A FS D  WYR  ++  +   G  V+++D+GN+E
Sbjct:  416 AGEICSALFTEDNRWYRATVLDRVSEDSALVGYVDFGNVEHLPVSRLRPIPARMLAFPLQAIQCSLEGVRPAS-----KTWTKEATTKMASLVANKMITVRVITESEGSLMVELLDGSVNPELD---IARQLILAGLA------VDKEAGVGMDEGSSGALAGTGGELMDDSGAKPGQWTSAELPLGRAVDVSV----CMLYSPGEFFCQLCNEKDAKS-LTELNRSLGQHCQKG----SATQYNPKAGKICCAFFSGDGNWYRAMVMGVEQK-GTKVRFMDYGNTE 678
[Close]
BLAST of tudor-1 vs. Ensembl Xenopus
Match: TDRD15 (tudor domain containing 15 [Source:NCBI gene;Acc:101731147])

HSP 1 Score: 50.8322 bits (120), Expect = 9.438e-6
Identity = 26/69 (37.68%), Postives = 41/69 (59.42%), Query Frame = 2 
Query:  239 DYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKI 445
            D + GD+  A+Y +D+ +YR  +  ILD  KV V F D+GNTE +P  ++  L  +  I+  LA+ C +
Sbjct:  517 DPEPGDLCCALYYKDRHYYRAIVTDILDL-KVAVYFFDFGNTETVPCYDVKTLLPEFEILPALAMCCSL 584
[Close]
BLAST of tudor-1 vs. Ensembl Mouse
Match: Stk31 (serine threonine kinase 31 [Source:MGI Symbol;Acc:MGI:1924735])

HSP 1 Score: 51.2174 bits (121), Expect = 5.317e-6
Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 2 
Query:  257 IYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQI---SIIKPLALM-CKIPS 451
            IY  ++ +DK +YR K+L+ +  +K LV ++DYGNTEI+ ++++  +P ++   SI K   L   +IPS
Sbjct:   84 IYGGLFSEDKCWYRCKVLKTISDDKCLVRYIDYGNTEILNRSDIVEIPPELQFSSIAKKYRLWGLQIPS 152
[Close]
BLAST of tudor-1 vs. Ensembl Mouse
Match: Stk31 (serine threonine kinase 31 [Source:MGI Symbol;Acc:MGI:1924735])

HSP 1 Score: 51.2174 bits (121), Expect = 5.472e-6
Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 2 
Query:  257 IYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQI---SIIKPLALM-CKIPS 451
            IY  ++ +DK +YR K+L+ +  +K LV ++DYGNTEI+ ++++  +P ++   SI K   L   +IPS
Sbjct:   84 IYGGLFSEDKCWYRCKVLKTISDDKCLVRYIDYGNTEILNRSDIVEIPPELQFSSIAKKYRLWGLQIPS 152
[Close]
BLAST of tudor-1 vs. Ensembl Mouse
Match: Stk31 (serine threonine kinase 31 [Source:MGI Symbol;Acc:MGI:1924735])

HSP 1 Score: 50.8322 bits (120), Expect = 6.080e-6
Identity = 26/69 (37.68%), Postives = 45/69 (65.22%), Query Frame = 2 
Query:  257 IYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQI---SIIKPLALM-CKIPS 451
            IY  ++ +DK +YR K+L+ +  +K LV ++DYGNTEI+ ++++  +P ++   SI K   L   +IPS
Sbjct:   84 IYGGLFSEDKCWYRCKVLKTISDDKCLVRYIDYGNTEILNRSDIVEIPPELQFSSIAKKYRLWGLQIPS 152
[Close]
BLAST of tudor-1 vs. UniProt/SwissProt
Match: sp|Q9BXT4|TDRD1_HUMAN (Tudor domain-containing protein 1 OS=Homo sapiens OX=9606 GN=TDRD1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 5.486e-12
Identity = 87/368 (23.64%), Postives = 159/368 (43.21%), Query Frame = 2 
Query:   41 KSMKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKV--GDIYAAIYPQDKMFYRVKILQILDFE--KVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMK---------IIQELCTDDVVITIENKT-----RMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPE-CDIYVHEFSK--------NSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
            +S++  K   +KG  T +++ G  Y        LE       ++ L+ S          Y  + E DY    G++  A Y  D+ + R  I+Q +D +  K  V ++DYGN EIIP   +  L   I +  P A+ C + ++ +  E  +           ++++ C+  +V  +E +       +++ N G L+++++I +      GY ++                D+     + SD E + ++TT  + VV       +  D    V+  +V  E C +  H  +          S  +L  LQA + +  ++   R SD      ++  AQFSED+ WYR  ++++ S    LV Y+D+GN E
Sbjct:  256 RSLQLKKTMEIKGTVTEFKHPGDFYVQLYSSEVLEY------MNQLSAS------LKETYANVHEKDYIPVKGEVCIAKYTVDQTWNRA-IIQNVDVQQKKAHVLYIDYGNEEIIPLNRIYHLNRNIDLFPPCAIKCFVANV-IPAEGNWSSDCIKATKPLLMEQYCSIKIVDILEEEVVTFAVEVELPNSGKLLDHVLIEM------GYGLK------------PSGQDSKKENADQSDPEDVGKMTTENNIVV-------DKSDLIPKVLTLNVGDEFCGVVAHIQTPEDFFCQQLQSGRKLAELQASLSKYCDQLPPR-SDFYPAIGDICCAQFSEDDQWYRASVLAYASEESVLVGYVDYGNFE 583
[Close]
BLAST of tudor-1 vs. UniProt/SwissProt
Match: sp|Q9BXU1|STK31_HUMAN (Serine/threonine-protein kinase 31 OS=Homo sapiens OX=9606 GN=STK31 PE=2 SV=2)

HSP 1 Score: 54.299 bits (129), Expect = 3.985e-6
Identity = 39/138 (28.26%), Postives = 73/138 (52.90%), Query Frame = 2 
Query:  257 IYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQI---SIIKPLALM-CKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEE 658
            IY  ++ +D+ +YR K+L+I+  EK LV ++DYGNTEI+ ++++  +P ++   S+ K   L    IPS + +   QF +    L +  ++   E K R+K  +E G +      +    Y    I + +++   AE+
Sbjct:   84 IYGGLFSEDQCWYRCKVLKIISVEKCLVRYIDYGNTEILNRSDIVEIPLELQFSSVAKKYKLWGLHIPSDQEV--TQFDQGTTFLGS--LIFEKEIKMRIKATSEDGTV------IAQAEYGSVDIGEEVLKKGFAEK 211
[Close]
BLAST of tudor-1 vs. UniProt/SwissProt
Match: sp|P25823|TUD_DROME (Maternal protein tudor OS=Drosophila melanogaster OX=7227 GN=tud PE=1 SV=2)

HSP 1 Score: 53.5286 bits (127), Expect = 8.470e-6
Identity = 45/144 (31.25%), Postives = 70/144 (48.61%), Query Frame = 2 
Query:   32 LCE-KSMKFAKKTTL----KGRFTHYENNGYIYFN-SKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKI 445
            LC+ K  K A K +L    K   TH EN   IY   S+ D+ ++  C     + LN S           L  +     V D+    +  D  FYR +IL++L+ ++  V  +DYGNT ++ K  L  LP + ++IKP+A +C +
Sbjct: 1963 LCQRKEPKEASKESLAVTTKAIITHVENTSRIYLQFSEKDSLMDIIC-----EKLNGSK----------LQPKTEKAAVDDMCVVQFADDLEFYRSRILEVLEDDQYKVILIDYGNTTVVDK--LYELPQEFTLIKPVAEICSM 2089
[Close]
BLAST of tudor-1 vs. TrEMBL
Match: I1ZID4 (Tudor-1 (Fragment) OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 1303.12 bits (3371), Expect = 0.000e+0
Identity = 635/636 (99.84%), Postives = 635/636 (99.84%), Query Frame = 2 
Query:  230 QEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIFNNRSIVQTLISKKIVHLVNNDDWFPFEISHNAYAQTNYHEIKSRKNPHSLYSV 2137
            QEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIFNNRSIVQTLISKKIVHLVNNDDWFPFEIS NAYAQTNYHEIKSRKNPHSLYSV
Sbjct:    1 QEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIFNNRSIVQTLISKKIVHLVNNDDWFPFEISQNAYAQTNYHEIKSRKNPHSLYSV 636
[Close]
BLAST of tudor-1 vs. TrEMBL
Match: D5JG63 (Tudor domain-1 OS=Dugesia japonica OX=6161 GN=TDRD-1 PE=2 SV=1)

HSP 1 Score: 635.18 bits (1637), Expect = 0.000e+0
Identity = 303/421 (71.97%), Postives = 364/421 (86.46%), Query Frame = 2 
Query:   29 MLCEKSMKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDS-DTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSV 1288
            MLCEKSMK+ K  TLKGRFTHYENNGY+YFNSKD+ DLE+HCIF+CL NLNNSYSKENN+YRNYLYLQEIDYKVGD+YAAIYPQDKMFYRVKILQILDFEKVLVCF+DYGNTEII KAELA LPHQIS IKPLAL+CKIP+IKLI +K FMKIIQELC +D+ ITIE++T+MKI+NEGGL+ENL +NLI+F YNG+ IRDYL+R+ IAE   E Y+  + WPND  D E  ++++T  D   S+    S   +YSK+VIITSVS EC+I+VH+FSK+ KT+LESLQA+I +++E +K +ISDN+FNKR+MYLAQFSED+LWYRC+I +FDS  GFLVQYIDFGNSEYKTSLSEL+LL+ +MGSDA +L++E+PIAQQCQLS E++ TFP SINIRKYLIK FVEPVKKL+ITY I E+ ++
Sbjct:    1 MLCEKSMKYPKNITLKGRFTHYENNGYLYFNSKDENDLERHCIFTCLANLNNSYSKENNYYRNYLYLQEIDYKVGDVYAAIYPQDKMFYRVKILQILDFEKVLVCFIDYGNTEIIAKAELATLPHQISHIKPLALLCKIPNIKLIFDKSFMKIIQELCVNDISITIESRTKMKIVNEGGLVENLEVNLINFQYNGHSIRDYLLRNKIAENFDEIYEEISLWPNDDVDVESQIKLSTKQDN--SSTCNISPSLEYSKSVIITSVSSECNIFVHDFSKSVKTKLESLQAHISKVVENFKIQISDNMFNKRSMYLAQFSEDSLWYRCKISNFDSTYGFLVQYIDFGNSEYKTSLSELMLLSRDMGSDAIYLIDEDPIAQQCQLSSEVIMTFPSSINIRKYLIKKFVEPVKKLTITYHITEEPAI 419
[Close]
BLAST of tudor-1 vs. TrEMBL
Match: C0L3L1 (Tudor domain containing 2 (Fragment) OS=Schmidtea polychroa OX=50054 GN=oltud-2 PE=2 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 1.782e-93
Identity = 143/154 (92.86%), Postives = 149/154 (96.75%), Query Frame = 2 
Query:  686 AWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPI 1147
            AWPNDSDTEG+VQVTT+MDK+VSTH  SSEH DY+KTVIITSVS ECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRII+FDSA GFLVQYIDFGNSEYKTSLSEL+LLTHEMGSDADFLMNEEPI
Sbjct:    1 AWPNDSDTEGLVQVTTNMDKMVSTH-ASSEHLDYTKTVIITSVSTECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIINFDSAYGFLVQYIDFGNSEYKTSLSELMLLTHEMGSDADFLMNEEPI 153
[Close]
BLAST of tudor-1 vs. TrEMBL
Match: M3XI36 (Tudor domain containing 1 OS=Latimeria chalumnae OX=7897 GN=TDRD1 PE=4 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.781e-12
Identity = 109/437 (24.94%), Postives = 194/437 (44.39%), Query Frame = 2 
Query:  245 KVGDIYAAIYPQDKMFYRVKILQILDF--EKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLI----QEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVST-------HTVSSEHYD--YSKTVIITSV------------SPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDN-IFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLS--MEIVKTF-PKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSI-HDVADIKVAEYL 1453
            + G++  A Y QD+ +YR  ++Q +D   +K  + ++DYGN E I    + PL  +I +  P A+ C IP++  +     E+    + Q L     V+TI     + +++   ++    ++++ FP  G  +  YL++   + +            N ++ +  +     MDK +          TV  E  +   S  VI  SV            +P  D++  +  K+ + +L  LQA     + +Y  RI  N  FN        AQF+EDN WYR  I+ +      LV YID+GN E         +LT  +      L++    A +C LS     ++T+ P++I + K L+   +  V+   +T    E+++V+ L+        +++E L     V      ++GE+S  S+ S+  DV  +  AEYL
Sbjct:  320 ETGEVCVAKYTQDQNWYRA-LVQAVDQAQKKASILYIDYGNGEEISLDRIRPLLKEIELFPPCAVQCFIPNVTPVDGYWNEECINSVRQLLLGQPTVVTI-----LDVLHNDTILVCCAVDIM-FPNTGESLDKYLLKKGYSSDQV----------NKNNMKTTMDFGVVMDKTLKEFREAKVLETVEKEECEDLQSPQVISLSVGDVFSAVVADIQTP--DVFFCQQLKSGR-QLAELQA----TLSEYCSRIPANPAFNPAVGTTCCAQFTEDNQWYRASILGYSPEDTVLVGYIDYGNVEE--------VLTRRLRPLQGSLLHLPVQAIKCALSGVKPPLETWSPEAIAVMKKLVSQKILEVR---VTGTREENTAVVELLDKSVDPVVNVAEHL-----VSASWAAEEGEMSMTSNASLKKDVPTVNQAEYL 716
[Close]
BLAST of tudor-1 vs. TrEMBL
Match: H3AU05 (Tudor domain containing 1 OS=Latimeria chalumnae OX=7897 GN=TDRD1 PE=4 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.127e-11
Identity = 108/438 (24.66%), Postives = 193/438 (44.06%), Query Frame = 2 
Query:  245 KVGDIYAAIYPQDKMFYRVKILQILDF--EKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLI----QEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVST-------HTVSSEHYD--YSKTVIITSV------------SPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDN-IFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLS--MEIVKTF-PKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHD--VADIKVAEYL 1453
            + G++  A Y QD+ +YR  ++Q +D   +K  + ++DYGN E I    + PL  +I +  P A+ C IP++  +     E+    + Q L     V+TI     + +++   ++    ++++ FP  G  +  YL++   + +            N ++ +  +     MDK +          TV  E  +   S  VI  SV            +P  D++  +  K+ + +L  LQA     + +Y  RI  N  FN        AQF+EDN WYR  I+ +      LV YID+GN E         +LT  +      L++    A +C LS     ++T+ P++I + K L+   +  V+   +T    E+++V+ L+        +++E L     V      ++GE+S  S+ S+    V  +  AEYL
Sbjct:  287 ETGEVCVAKYTQDQNWYRA-LVQAVDQAQKKASILYIDYGNGEEISLDRIRPLLKEIELFPPCAVQCFIPNVTPVDGYWNEECINSVRQLLLGQPTVVTI-----LDVLHNDTILVCCAVDIM-FPNTGESLDKYLLKKGYSSDQV----------NKNNMKTTMDFGVVMDKTLKEFREAKVLETVEKEECEDLQSPQVISLSVGDVFSAVVADIQTP--DVFFCQQLKSGR-QLAELQA----TLSEYCSRIPANPAFNPAVGTTCCAQFTEDNQWYRASILGYSPEDTVLVGYIDYGNVEE--------VLTRRLRPLQGSLLHLPVQAIKCALSGVKPPLETWSPEAIAVMKKLVSQKILEVR---VTGTREENTAVVELLDKSVDPVVNVAEHL-----VSASWAAEEGEMSMTSNASLKKDAVPTVNQAEYL 684
[Close]
BLAST of tudor-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009031.1 (pep scaffold:Pmarinus_7.0:GL480172:2151:16965:1 gene:ENSPMAG00000008166.1 transcript:ENSPMAT00000009031.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 48.9062 bits (115), Expect = 5.305e-6
Identity = 65/287 (22.65%), Postives = 122/287 (42.51%), Query Frame = 2 
Query:  227 LQEIDYKVGDIYAAIYPQDKMFYRVKILQI-LDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPL-ALMCKIPSIKL---IQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLIS---FPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSE 1063
            L+  D K+GD+  A Y  D+ +YR  +     D    LV F+DYGNT+ +    ++ L H + +  P  ++ C +  ++    ++  ++ K   EL T+  V  +E +        GG      +NL +                +   A E T   +  T      D  G+      MD ++       + Y+     +  S++   D +  +    +  +L SL + +    ++ +  +S  +     +YLA++SEDN+ YR R++   +A    V +ID+GN E
Sbjct: 1254 LRPSDLKLGDLICAKYSADESWYRAVVRGFEPDDPLALVEFIDYGNTDRVGSDSMSEL-HPVFLRHPRQSIACSLAGVRPCVSVRGNKWTKEAAELFTE-TVHDLELRCEFLARAHGGNDALWEVNLTAESGTERQEQLKEQQQEQKQQASETTSELECATTNSTHEDNHGV-----EMDGMLEL----GQQYE-----VYVSLARGLDNFWCQLKVLADEQLTSLMSVVATTGDERE--VSLAMVEVGGLYLARYSEDNILYRARVLDV-TAGRAKVMFIDYGNEE 1521
[Close]
BLAST of tudor-1 vs. Ensembl Nematostella
Match: EDO36108 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJJ0])

HSP 1 Score: 63.929 bits (154), Expect = 2.282e-10
Identity = 120/562 (21.35%), Postives = 209/562 (37.19%), Query Frame = 2 
Query:  248 VGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQ-------EKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVST------HTVSSEHYDYSKTVIITSVSPE---CDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKR--NMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRIND-----------SNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTID---NRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVL 1837
            VGDI  A + +D  +YR  + ++ + +KV V F+DYGN E +P   +  L  + S +    + C +  I+ +        +K+F  I  E      VI + N                 ++L+        + +Y++ SN A                    G+    TS  + +S+        +S    DY   ++  S SP    C +  H+   +S   + +L  Y      K      DNI + R      A FS D  WYR  +     A    VQ++D+GNSE        I+   ++ +     M+    A  C+L       F KS +  K LI+ F E          +  +  ++ +I +  Y              +  R+V            ++HD AD K    L    P +  +   I             +     VT + G+ QF+  +   +  E  D ++  +D   N  A   EV+ +   GV             R +I++V  N + +  ID G +  +  + +  L+++   LP+QV+
Sbjct:  511 VGDICCAKFSEDDCWYRAIVTEVQESKKVGVRFIDYGNCESLPPKHIKKLVPRFSDLPCQGIECSLNRIQPLAADWRPGDKKKFEDIALEKEAVMTVIAVSNGVHR-------------VDLVLLGRKELDVSEYMLLSNCA--------------------GLASGATSQSENLSSILAKEYTKLSLTLGDYEDVLVSYSESPAVFWCQLLKHKAELDS--IMNALHEYCANSGPK------DNINSPRVGTPCCAMFSVDEGWYRGLVTGVTRANQVEVQFVDYGNSE--------IMPPSQLRAMKPEFMSLSAQAISCELEH---LGFNKSHHFTKELIEKFDE----------VTAEKELVAMIAS--YDK------------INHRYV-----------VALHDTADGKNENILDLLTPLLSKKASGIGSVSIPKPNLAPGARENVCVTSVVGVTQFYCQV--MKASEQLDRMMVALDDHYNTLADSQEVLTEVKPGVCCAARYTEDDSWYRARILEVSRNTVTVQYIDYGNSETLPNNRLKMLASKFAELPEQVV 983
[Close]
BLAST of tudor-1 vs. Ensembl Medaka
Match: amh (Oryzias latipes anti-Mullerian hormone (amh), mRNA. [Source:RefSeq mRNA;Acc:NM_001360941])

HSP 1 Score: 51.6026 bits (122), Expect = 3.392e-6
Identity = 28/83 (33.73%), Postives = 47/83 (56.63%), Query Frame = 2 
Query:  218 YLYLQEIDYKVGDIYAAIY----PQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSI 454
            +L+   ++  V D+   +Y     +D  FYRV + ++ +  KV V FVDYGNTE++ K ++  LP +   +  LAL C + S+
Sbjct:  503 HLHKGSVNTDVKDLIVGLYCVAKAKDDNFYRVSVCEVGN-AKVKVFFVDYGNTEVVDKNDIRSLPPEFKELPKLALKCTLASV 584
[Close]
BLAST of tudor-1 vs. Ensembl Medaka
Match: amh (Oryzias latipes anti-Mullerian hormone (amh), mRNA. [Source:RefSeq mRNA;Acc:NM_001360941])

HSP 1 Score: 51.6026 bits (122), Expect = 3.646e-6
Identity = 28/83 (33.73%), Postives = 47/83 (56.63%), Query Frame = 2 
Query:  218 YLYLQEIDYKVGDIYAAIY----PQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSI 454
            +L+   ++  V D+   +Y     +D  FYRV + ++ +  KV V FVDYGNTE++ K ++  LP +   +  LAL C + S+
Sbjct:  503 HLHKGSVNTDVKDLIVGLYCVAKAKDDNFYRVSVCEVGN-AKVKVFFVDYGNTEVVDKNDIRSLPPEFKELPKLALKCTLASV 584
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BLAST of tudor-1 vs. Planmine SMEST
Match: SMESG000030853.1 (SMESG000030853.1)

HSP 1 Score: 1434.85 bits (3713), Expect = 0.000e+0
Identity = 697/697 (100.00%), Postives = 697/697 (100.00%), Query Frame = 2 
Query:   47 MKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIFNNRSIVQTLISKKIVHLVNNDDWFPFEISHNAYAQTNYHEIKSRKNPHSLYSV 2137
            MKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIFNNRSIVQTLISKKIVHLVNNDDWFPFEISHNAYAQTNYHEIKSRKNPHSLYSV
Sbjct:    1 MKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQQVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIFNNRSIVQTLISKKIVHLVNNDDWFPFEISHNAYAQTNYHEIKSRKNPHSLYSV 697
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BLAST of tudor-1 vs. Planmine SMEST
Match: SMESG000026637.1 (SMESG000026637.1)

HSP 1 Score: 119.783 bits (299), Expect = 1.954e-27
Identity = 142/589 (24.11%), Postives = 251/589 (42.61%), Query Frame = 2 
Query:   86 THYENNGYIYFN--SKDDTDLEKHCIFSCLDNLNNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFEKVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQFMKIIQELCTDDVVITIENKTRMKIIN--EGGLMENLVINLISFPYNGYPIRDYLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEHYDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRISDNIFNKRNMYLAQFSEDNLWYRCRIIS--FDSACG-FLVQYIDFGNSEYKTSLSELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKSFVEPVKKLSITYQINEDSSVIWLIKNMCY-RHQDLSELLEKQCVVKERHVNKDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTHIDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIY-GVMTNVSEDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALP 1825
            TH+ ++GY Y    S+ DT+     + S L +L+N +          L ++  D +VG +YA  Y  D   YRV+I   L+  +V   FVD+GN E+I    + P+ ++++   P+   C I  +K+    +   + +E+        +    R K++   +  L  + V++L    +     R YLI  +IA+E+   Y+       +   E                           +V+IT      + YV   +      L  L   I   +E    R  D    +  +Y++QF++DN WYRCRI+   F+   G  LVQ+IDFGN E K +  +L  L  +  S    L+     A++C+ S +++    K+   ++Y +++FV   K +S  Y  ++ SS IW+++N+    H+++  ++ KQC   E+                    DI    Y L     +Q  +FR+  S    +  H+  + Q W      + Q   D            V +++++  Y   M N         +RC +I   ++ + I  ID G    V +D IF L+  ++A+P
Sbjct:  104 THF-HDGYYYVQLLSEKDTNT---LMSSNLRDLHNDFK-----CGKVLPMKYADIEVGTLYATYYSDDNHLYRVRITGKLNNTEVKAEFVDFGNEEVISNQYIFPISNKLAGFVPMVHKCVITDVKIKSSTKQEYLAREI--------LHRNYRAKLVKRRDETLNCDRVVSLDYVDFTTVSYRSYLIIEDIADEI--QYNGCKPECRNGLKE-------------------------EASVVITHFESLDEFYVQPANTIINENLSFLSNAIADFVE--TIRPEDTYIGQDVLYVSQFTQDNNWYRCRIVEDRFNGVEGNCLVQFIDFGNFELKWNREDLKPLVDKEDSSVAELIKIPACARKCKFSDDLIYALSKAKMEKEYFLQNFVRSEKVVSFQYDFDQ-SSKIWIVENIVMPNHEEIISIVMKQCENTEK-------------------TDI----YRLTNLESLQKLWFRLVKSVNPAVQEHVATIEQ-W-----TKEQNFRD---------LQPVKQILLNQPYCAKMPN------GYPIRCTVIAKNKSSVIIQSIDGGNYESVPIDSIFALNPSVVAVP 601
The following BLAST results are available for this feature:
BLAST of tudor-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TDRD11.019e-1223.64tudor domain containing 1 [Source:HGNC Symbol;Acc:... [more]
TDRD11.097e-1223.64tudor domain containing 1 [Source:HGNC Symbol;Acc:... [more]
TDRD11.280e-1223.50tudor domain containing 1 [Source:HGNC Symbol;Acc:... [more]
STK316.217e-839.22serine/threonine kinase 31 [Source:HGNC Symbol;Acc... [more]
STK318.150e-839.22serine/threonine kinase 31 [Source:HGNC Symbol;Acc... [more]
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BLAST of tudor-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of tudor-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
tud8.450e-731.25gene:FBgn0003891 transcript:FBtr0071582[more]
tud8.521e-731.25gene:FBgn0003891 transcript:FBtr0342870[more]
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BLAST of tudor-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of tudor-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TDRD17.120e-823.00tudor domain containing 1 [Source:NCBI gene;Acc:10... [more]
TDRD17.146e-823.00tudor domain containing 1 [Source:NCBI gene;Acc:10... [more]
TDRD17.310e-823.00tudor domain containing 1 [Source:NCBI gene;Acc:10... [more]
TDRD17.875e-823.00tudor domain containing 1 [Source:NCBI gene;Acc:10... [more]
TDRD159.438e-637.68tudor domain containing 15 [Source:NCBI gene;Acc:1... [more]
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BLAST of tudor-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 3
Match NameE-valueIdentityDescription
Stk315.317e-637.68serine threonine kinase 31 [Source:MGI Symbol;Acc:... [more]
Stk315.472e-637.68serine threonine kinase 31 [Source:MGI Symbol;Acc:... [more]
Stk316.080e-637.68serine threonine kinase 31 [Source:MGI Symbol;Acc:... [more]
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BLAST of tudor-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|Q9BXT4|TDRD1_HUMAN5.486e-1223.64Tudor domain-containing protein 1 OS=Homo sapiens ... [more]
sp|Q9BXU1|STK31_HUMAN3.985e-628.26Serine/threonine-protein kinase 31 OS=Homo sapiens... [more]
sp|P25823|TUD_DROME8.470e-631.25Maternal protein tudor OS=Drosophila melanogaster ... [more]
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BLAST of tudor-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
I1ZID40.000e+099.84Tudor-1 (Fragment) OS=Schmidtea mediterranea OX=79... [more]
D5JG630.000e+071.97Tudor domain-1 OS=Dugesia japonica OX=6161 GN=TDRD... [more]
C0L3L11.782e-9392.86Tudor domain containing 2 (Fragment) OS=Schmidtea ... [more]
M3XI364.781e-1224.94Tudor domain containing 1 OS=Latimeria chalumnae O... [more]
H3AU053.127e-1124.66Tudor domain containing 1 OS=Latimeria chalumnae O... [more]
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BLAST of tudor-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of tudor-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ENSPMAT00000009031.15.305e-622.65pep scaffold:Pmarinus_7.0:GL480172:2151:16965:1 ge... [more]
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BLAST of tudor-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of tudor-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO361082.282e-1021.35Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of tudor-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
amh3.392e-633.73Oryzias latipes anti-Mullerian hormone (amh), mRNA... [more]
amh3.646e-633.73Oryzias latipes anti-Mullerian hormone (amh), mRNA... [more]
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BLAST of tudor-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000030853.10.000e+0100.00SMESG000030853.1[more]
SMESG000026637.11.954e-2724.11SMESG000026637.1[more]
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Cross References
External references for this transcript
DatabaseAccession
SmedGD GBrowseSMED30028056
GenBankAFJ24788.1
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30028056 ID=SMED30028056|Name=tudor-1|organism=Schmidtea mediterranea sexual|type=transcript|length=2191bp
TATTAAATGAAGTTTTGATTCTTCTCATATGCTTTGTGAAAAATCAATGA
AATTTGCCAAAAAGACAACACTTAAAGGTAGATTTACTCACTACGAAAAT
AATGGTTATATTTACTTTAATTCCAAAGATGATACTGATCTTGAAAAACA
TTGCATATTTAGTTGCTTAGACAATTTGAATAATAGTTATTCAAAAGAAA
ACAATTTCTATCGTAATTATTTGTATCTTCAGGAGATTGATTACAAAGTC
GGCGATATTTATGCCGCAATTTATCCCCAAGATAAAATGTTTTATCGTGT
CAAAATATTACAGATTTTGGATTTCGAGAAGGTTCTAGTGTGCTTTGTTG
ATTATGGGAACACAGAAATTATTCCGAAAGCTGAACTTGCACCATTACCT
CATCAAATAAGTATAATCAAGCCGTTGGCTCTTATGTGCAAAATACCTAG
CATCAAATTAATTCAAGAAAAGCAGTTCATGAAAATAATACAGGAATTAT
GCACCGATGATGTAGTGATTACTATAGAAAACAAAACTAGAATGAAAATA
ATAAATGAGGGCGGGCTAATGGAGAATTTAGTTATCAATTTAATCAGCTT
TCCATACAATGGATATCCGATTCGAGATTATTTAATTCGATCAAACATTG
CCGAGGAGCTAACAGAAAGCTATGACGCGTTTACAGCGTGGCCAAATGAC
AGTGACACCGAAGGAATAGTTCAAGTAACGACAAGTATGGATAAGGTCGT
ATCAACTCATACAGTAAGCAGTGAGCATTACGATTACAGCAAGACGGTTA
TCATCACCAGTGTCAGCCCGGAATGTGATATTTATGTCCATGAATTTTCA
AAGAATAGCAAAACAAGACTCGAATCCCTGCAGGCCTATATTGGGAGAAT
TATCGAGAAATATAAATGTCGTATTTCCGATAACATTTTTAATAAGCGGA
ACATGTATCTTGCACAATTCAGTGAGGATAATCTGTGGTACAGGTGCAGA
ATCATCAGTTTTGATTCTGCCTGCGGATTCCTTGTGCAATACATAGATTT
CGGCAATTCCGAATATAAGACTTCATTGTCAGAGCTGATATTACTGACCC
ACGAGATGGGATCCGATGCAGACTTCCTGATGAATGAAGAACCGATAGCT
CAACAGTGCCAATTGTCAATGGAAATTGTGAAAACATTTCCCAAGTCAAT
TAATATCCGGAAATATCTCATCAAGTCATTTGTAGAACCAGTCAAGAAAT
TAAGTATAACCTATCAAATAAATGAAGATTCATCAGTGATATGGTTGATC
AAAAACATGTGTTACCGCCATCAGGATCTGAGTGAACTACTAGAGAAACA
GTGTGTGGTAAAGGAACGTCATGTAAATAAAGATGGCGAGGTCAGTGAGG
CCAGCTCTCATTCAATACACGATGTGGCTGACATTAAAGTCGCTGAATAT
TTATTAAATGGCTGTCCAGATATACAGGATGAATTTTTCCGAATTAATGA
TTCCAATCGTCAATATCTCGTGACTCATATTGATGGTTTGAATCAGTTTT
GGATTGACATTGGTGATGGCCAGACCCAGGAAATGTGCGATAATCTCTTG
TCTACGATAGACAACAGGCAGGCTGGTGTCACTGAGGTTGTTATCGACTA
TATTTATGGAGTCATGACAAATGTGTCGGAGGACGGCAAATCGGTTGCGG
TCCGTTGCAAAATTATTGATGTATGTGAAAATTTCATCAAAATCCATCTC
ATTGACAAAGGACCTACCAGGCATGTTCTACTAGATGAGATATTTAATTT
ATCCGCAGAAATTATAGCTTTGCCTCAACAGGTTTTAAAGTTCCAATTTC
CCGATAATTTAATTGCTAATATTAATGAGGAGGTTTTAGTGAAACACTTG
AAATCCTTATTGGAAGGTCGATATGTTCGTATTATCAGAGAGTCGCTGAC
GACAAATGTCCTTATCGATATCATTTTCAATAACAGGAGTATTGTACAAA
CGTTAATTTCCAAGAAGATTGTCCATCTAGTCAACAATGACGATTGGTTC
CCATTCGAAATATCTCACAATGCTTACGCGCAAACTAATTACCATGAAAT
AAAAAGCAGAAAAAATCCTCATTCCCTTTACAGCGTTTAGAAATCTGTTT
GCGTTTGTGTATTTTTATAAATAAATTGATGTTCAAATCGA
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protein sequence of SMED30028056-orf-1

>SMED30028056-orf-1 ID=SMED30028056-orf-1|Name=SMED30028056-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=704bp
MLCEKSMKFAKKTTLKGRFTHYENNGYIYFNSKDDTDLEKHCIFSCLDNL
NNSYSKENNFYRNYLYLQEIDYKVGDIYAAIYPQDKMFYRVKILQILDFE
KVLVCFVDYGNTEIIPKAELAPLPHQISIIKPLALMCKIPSIKLIQEKQF
MKIIQELCTDDVVITIENKTRMKIINEGGLMENLVINLISFPYNGYPIRD
YLIRSNIAEELTESYDAFTAWPNDSDTEGIVQVTTSMDKVVSTHTVSSEH
YDYSKTVIITSVSPECDIYVHEFSKNSKTRLESLQAYIGRIIEKYKCRIS
DNIFNKRNMYLAQFSEDNLWYRCRIISFDSACGFLVQYIDFGNSEYKTSL
SELILLTHEMGSDADFLMNEEPIAQQCQLSMEIVKTFPKSINIRKYLIKS
FVEPVKKLSITYQINEDSSVIWLIKNMCYRHQDLSELLEKQCVVKERHVN
KDGEVSEASSHSIHDVADIKVAEYLLNGCPDIQDEFFRINDSNRQYLVTH
IDGLNQFWIDIGDGQTQEMCDNLLSTIDNRQAGVTEVVIDYIYGVMTNVS
EDGKSVAVRCKIIDVCENFIKIHLIDKGPTRHVLLDEIFNLSAEIIALPQ
QVLKFQFPDNLIANINEEVLVKHLKSLLEGRYVRIIRESLTTNVLIDIIF
NNRSIVQTLISKKIVHLVNNDDWFPFEISHNAYAQTNYHEIKSRKNPHSL
YSV*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000043dorsal ventral margin of the whole animal
PLANA:0000070intestinal phagocyte
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
Vocabulary: molecular function
TermDefinition
GO:0005515protein binding
GO:0046872metal ion binding
Vocabulary: cellular component
TermDefinition
GO:0005737cytoplasm
GO:0030529intracellular ribonucleoprotein complex
GO:0033391chromatoid body
GO:0043186P granule
GO:0071546pi-body
Vocabulary: biological process
TermDefinition
GO:0007275multicellular organism development
GO:0007281germ cell development
GO:0007283spermatogenesis
GO:0030154cell differentiation
GO:0031047gene silencing by RNA
GO:0034587piRNA metabolic process
GO:0043046DNA methylation involved in gamete generation
GO:0051321meiotic cell cycle
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 303..360
e-value: 1.3E-5
score: 34.6
coord: 70..128
e-value: 7.5E-8
score: 42.1
IPR002999Tudor domainPFAMPF00567TUDORcoord: 254..380
e-value: 2.1E-12
score: 47.1
coord: 491..607
e-value: 7.6E-7
score: 29.2
coord: 14..139
e-value: 1.1E-17
score: 64.2
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 71..130
score: 14.673
IPR002999Tudor domainPROSITEPS50304TUDORcoord: 303..362
score: 9.455
NoneNo IPR availableGENE3DG3DSA:2.40.50.790coord: 501..655
e-value: 4.4E-5
score: 25.5
NoneNo IPR availableGENE3DG3DSA:2.30.30.140coord: 514..598
e-value: 4.4E-5
score: 25.5
NoneNo IPR availableGENE3DG3DSA:2.40.50.790coord: 269..416
e-value: 1.5E-13
score: 53.1
NoneNo IPR availableGENE3DG3DSA:2.30.30.140coord: 44..137
e-value: 2.0E-17
score: 64.7
NoneNo IPR availableGENE3DG3DSA:2.30.30.140coord: 278..370
e-value: 1.5E-13
score: 53.1
NoneNo IPR availablePANTHERPTHR22948TUDOR DOMAIN CONTAINING PROTEINcoord: 58..189
coord: 239..487
NoneNo IPR availablePANTHERPTHR22948:SF29FI20010P1-RELATEDcoord: 239..487
NoneNo IPR availablePANTHERPTHR22948:SF29FI20010P1-RELATEDcoord: 58..189
NoneNo IPR availableCDDcd04508TUDORcoord: 309..353
e-value: 3.83391E-11
score: 56.4523
NoneNo IPR availableCDDcd04508TUDORcoord: 75..122
e-value: 7.29904E-14
score: 64.1563
NoneNo IPR availableSUPERFAMILYSSF63748Tudor/PWWP/MBTcoord: 58..142
NoneNo IPR availableSUPERFAMILYSSF63748Tudor/PWWP/MBTcoord: 281..347