C2H2-type domain-containing protein

Overview
NameC2H2-type domain-containing protein
Smed IDSMED30028022
Length (bp)2004
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of C2H2-type domain-containing protein (SMED30028022) t-SNE clustered cells

Violin plots show distribution of expression levels for C2H2-type domain-containing protein (SMED30028022) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of C2H2-type domain-containing protein (SMED30028022) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for C2H2-type domain-containing protein (SMED30028022) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30028022

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30028022h1SMcG0021965 SmedASXL_019823SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
head regionSMED30028022h1SMcG0021965 SmedASXL_019861SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
X2 cellSMED30028022h1SMcG0021965 SmedASXL_019823SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30028022h1SMcG0021965 dd_Smed_v4_36433_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30028022h1SMcG0021965 dd_Smed_v4_36433_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30028022h1SMcG0021965 dd_Smed_v4_36433_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30028022h1SMcG0021965 dd_Smed_v6_36433_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
head regionSMED30028022h1SMcG0021965 OX_Smed_1.0.11846ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: HIVEP2 (HIVEP zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4921])

HSP 1 Score: 53.9138 bits (128), Expect = 1.109e-6
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: HIVEP2 (HIVEP zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4921])

HSP 1 Score: 53.9138 bits (128), Expect = 1.109e-6
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: HIVEP2 (HIVEP zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4921])

HSP 1 Score: 53.9138 bits (128), Expect = 1.109e-6
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: HIVEP1 (HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4920])

HSP 1 Score: 51.6026 bits (122), Expect = 5.299e-6
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 2 
Query: 1355 HAVEEIC--MQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
             +VE++C  + + +   KQG+     Y C +C      P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH
Sbjct:  385 QSVEQMCNLLLKDQKPKKQGK-----YICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSH 456
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Match: HIVEP1 (HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4920])

HSP 1 Score: 51.6026 bits (122), Expect = 5.482e-6
Identity = 28/78 (35.90%), Postives = 44/78 (56.41%), Query Frame = 2 
Query: 1355 HAVEEIC--MQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
             +VE++C  + + +   KQG+     Y C +C      P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH
Sbjct:  385 QSVEQMCNLLLKDQKPKKQGK-----YICEYCNRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSH 456
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Celegans
Match: ztf-2 (Zinc finger putative Transcription Factor family [Source:UniProtKB/TrEMBL;Acc:Q19418])

HSP 1 Score: 57.7658 bits (138), Expect = 1.162e-8
Identity = 28/73 (38.36%), Postives = 41/73 (56.16%), Query Frame = 2 
Query: 1364 EEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
            +EI M+++E      + + +   C  C Y  KW +E+ +H  VH+ ERP +C  C  T KWK DL RH  K+H
Sbjct:   71 DEIEMKKMEL-----DPDVSTRTCSTCGYQGKWVSEMIRHKRVHTSERPFKCRYCSRTSKWKADLIRHVAKTH 138
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Celegans
Match: M03D4.4 (pep chromosome:WBcel235:IV:6121773:6125198:-1 gene:WBGene00019751.1 transcript:M03D4.4b.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:M03D4.4)

HSP 1 Score: 50.0618 bits (118), Expect = 4.069e-6
Identity = 42/150 (28.00%), Postives = 67/150 (44.67%), Query Frame = 2 
Query: 1142 SNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQEL--EAVVKQGEIETTG---YQCPHCE--YFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF 1570
            S+F +       +M     S ++S G K     C  C   FA   +L TH            + +    + H+  + C +E     ++K+  +  TG   + CPHC   +F K    L +H+M+HS  RPH+C  C  T+ +K+DL RH 
Sbjct:    9 SDFLSDTDSSQLSMNPTTPSEKSSSGEKGRY-ECEDCHEMFAVKRELATH------------MRIHSGEQPHSCTQ-CGKEFGTRQLLKKHWMWHTGERSHVCPHCNKAFFQKG--HLTQHLMIHSGGRPHECPQCHKTFIFKFDLNRHM 142
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Celegans
Match: M03D4.4 (pep chromosome:WBcel235:IV:6121773:6127302:-1 gene:WBGene00019751.1 transcript:M03D4.4a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:M03D4.4)

HSP 1 Score: 49.6766 bits (117), Expect = 5.733e-6
Identity = 42/150 (28.00%), Postives = 67/150 (44.67%), Query Frame = 2 
Query: 1142 SNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQEL--EAVVKQGEIETTG---YQCPHC--EYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF 1570
            S+F +       +M     S ++S G K     C  C   FA   +L TH            + +    + H+  + C +E     ++K+  +  TG   + CPHC   +F K    L +H+M+HS  RPH+C  C  T+ +K+DL RH 
Sbjct:   58 SDFLSDTDSSQLSMNPTTPSEKSSSGEKGRY-ECEDCHEMFAVKRELATH------------MRIHSGEQPHSCTQ-CGKEFGTRQLLKKHWMWHTGERSHVCPHCNKAFFQKG--HLTQHLMIHSGGRPHECPQCHKTFIFKFDLNRHM 191
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Match: kmg (gene:FBgn0032473 transcript:FBtr0080433)

HSP 1 Score: 53.1434 bits (126), Expect = 6.731e-7
Identity = 47/214 (21.96%), Postives = 81/214 (37.85%), Query Frame = 2 
Query: 1037 NHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIK-------------ELELAKSWKSHAVEEICMQELEAVVKQGEIETT-------------GYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF------DKSH 1582
            NHH    +H M  R+  E     +  S+   K     FKN  + +A+T + +    RTSG        C  C     + + L  H     ++C +              E++L      +A  ++    +E     GE+                 ++CPHC ++A   +    HI+ H   +P +C +C     W+WD+ +H       D+SH
Sbjct:  397 NHHVPMPVHQMGNRSRDEAEDLVDQQSSGSRKPE--TFKNGGATVASTESLLP---RTSG------IVCSHCQKRVGNAMQLINHL----QVCTLALHNTTQLQASINAEVDLHDEDFPNAPTDLSYCGVETAPGYGEVTEVLPEEPEDLAPLKKVFKCPHCSFWAATASRFHVHIVGHLNRKPFECSLCAYRSNWRWDITKHIRLKALRDRSH 595
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Match: CG3407 (gene:FBgn0031573 transcript:FBtr0077515)

HSP 1 Score: 52.373 bits (124), Expect = 1.206e-6
Identity = 39/135 (28.89%), Postives = 58/135 (42.96%), Query Frame = 2 
Query: 1178 TMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELE---AVVKQGEIET--TGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            T +A+K+  RT  G K     C +C   F    DL  H ++ H              K+H  E  C +      ++V    I T    Y C +C+   +  + L  HI VH+ ERP++C IC   ++   DL RH
Sbjct:  534 TQSALKAHERTHSGVKP--FKCDKCEFQFRQWGDLKYHIISRH-----------SDVKAHMCE-FCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTFRASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRH 654
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Match: CG9932 (gene:FBgn0262160 transcript:FBtr0336616)

HSP 1 Score: 51.9878 bits (123), Expect = 1.994e-6
Identity = 16/48 (33.33%), Postives = 28/48 (58.33%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF 1570
            Y+CPHC ++A   +    HI+ H  ++P +C +C     W+WD+ +H 
Sbjct:  810 YKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCSYRSNWRWDITKHI 857
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Match: CG9932 (gene:FBgn0262160 transcript:FBtr0089956)

HSP 1 Score: 51.9878 bits (123), Expect = 2.229e-6
Identity = 16/48 (33.33%), Postives = 28/48 (58.33%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF 1570
            Y+CPHC ++A   +    HI+ H  ++P +C +C     W+WD+ +H 
Sbjct:  814 YKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCSYRSNWRWDITKHI 861
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Match: CG9932 (gene:FBgn0262160 transcript:FBtr0336617)

HSP 1 Score: 51.9878 bits (123), Expect = 2.266e-6
Identity = 16/48 (33.33%), Postives = 28/48 (58.33%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF 1570
            Y+CPHC ++A   +    HI+ H  ++P +C +C     W+WD+ +H 
Sbjct:  810 YKCPHCSFWASTASRFHVHIVGHLNKKPFECSLCSYRSNWRWDITKHI 857
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: hivep2b (HIVEP zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-130530-562])

HSP 1 Score: 54.6842 bits (130), Expect = 4.204e-7
Identity = 27/65 (41.54%), Postives = 39/65 (60.00%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            +Q  ++T  Y C +C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  AV
Sbjct:  111 EQKSVKTGKYVCQYCGRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHTHAV 174
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: ZNF335 (si:ch211-269m15.3 [Source:ZFIN;Acc:ZDB-GENE-141211-7])

HSP 1 Score: 47.7506 bits (112), Expect = 1.228e-6
Identity = 22/58 (37.93%), Postives = 34/58 (58.62%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEYFA-KWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHF 1570
            K+  I+   ++CP C++ A  WP E++ H+ +H+  RPH+C  C    K K DL RH 
Sbjct:    4 KRAHIDPKTFKCPDCDFTAPSWP-EVKTHMALHAYLRPHKCTSCSFASKNKKDLRRHM 60
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: znf831 (zinc finger protein 831 [Source:ZFIN;Acc:ZDB-GENE-081022-210])

HSP 1 Score: 52.7582 bits (125), Expect = 1.724e-6
Identity = 23/64 (35.94%), Postives = 37/64 (57.81%), Query Frame = 2 
Query: 1379 QELEAVVKQGEIETTG-YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            Q L A    G  ++ G + CPHC      P+ L+KH+  H+ ERP+ C  CG+++K + +L +H
Sbjct:   91 QRLVAPASAGRPKSLGKHVCPHCGKDCLKPSVLEKHLRCHTGERPYPCTTCGISFKTQSNLYKH 154
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: hivep1 (HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512])

HSP 1 Score: 51.6026 bits (122), Expect = 3.905e-6
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            KQG+     Y C +C+     P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  A+
Sbjct:  346 KQGK-----YVCEYCKRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSHAHAI 404
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Match: hivep1 (HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512])

HSP 1 Score: 51.6026 bits (122), Expect = 4.159e-6
Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            KQG+     Y C +C+     P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  A+
Sbjct:  346 KQGK-----YVCEYCKRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSHAHAI 404
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: zcrb1 (zinc finger CCHC-type and RNA binding motif containing 1 [Source:Xenbase;Acc:XB-GENE-999756])

HSP 1 Score: 53.9138 bits (128), Expect = 1.120e-6
Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  A+
Sbjct:  183 YICPYCTRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKH-RKSHAHAI 237
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: pmepa1 (prostate transmembrane protein, androgen induced 1 [Source:Xenbase;Acc:XB-GENE-1013948])

HSP 1 Score: 53.5286 bits (127), Expect = 1.123e-6
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEY-FAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            K+  + + G++CP C +  A WP E++ H+ VHS  RPH+C  C    K K DL RH
Sbjct: 1167 KRAHVPSGGFKCPDCIFTAANWP-EVRNHLSVHSDRRPHRCDQCSFACKNKRDLSRH 1222
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: pmepa1 (prostate transmembrane protein, androgen induced 1 [Source:Xenbase;Acc:XB-GENE-1013948])

HSP 1 Score: 53.5286 bits (127), Expect = 1.252e-6
Identity = 24/57 (42.11%), Postives = 34/57 (59.65%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEY-FAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            K+  + + G++CP C +  A WP E++ H+ VHS  RPH+C  C    K K DL RH
Sbjct: 1150 KRAHVPSGGFKCPDCIFTAANWP-EVRNHLSVHSDRRPHRCDQCSFACKNKRDLSRH 1205
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: gpr89b (G protein-coupled receptor 89B [Source:Xenbase;Acc:XB-GENE-484935])

HSP 1 Score: 52.7582 bits (125), Expect = 2.369e-6
Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2 
Query: 1412 IETTG--YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDK 1576
            I+ +G  Y CPHC    + P++L +HI +H+ ERP +C ICG  +  K  L  H  K
Sbjct:  184 IDRSGFSYSCPHCGKTFQKPSQLTRHIRIHTGERPFKCNICGKAFNQKGALATHMVK 240
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Match: gpr89b (G protein-coupled receptor 89B [Source:Xenbase;Acc:XB-GENE-484935])

HSP 1 Score: 52.7582 bits (125), Expect = 2.501e-6
Identity = 23/57 (40.35%), Postives = 33/57 (57.89%), Query Frame = 2 
Query: 1412 IETTG--YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDK 1576
            I+ +G  Y CPHC    + P++L +HI +H+ ERP +C ICG  +  K  L  H  K
Sbjct:  184 IDRSGFSYSCPHCGKTFQKPSQLTRHIRIHTGERPFKCNICGKAFNQKGALATHMVK 240
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Hivep2 (human immunodeficiency virus type I enhancer binding protein 2 [Source:MGI Symbol;Acc:MGI:1338076])

HSP 1 Score: 53.1434 bits (126), Expect = 6.247e-7
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Hivep2 (human immunodeficiency virus type I enhancer binding protein 2 [Source:MGI Symbol;Acc:MGI:1338076])

HSP 1 Score: 53.9138 bits (128), Expect = 8.869e-7
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Hivep2 (human immunodeficiency virus type I enhancer binding protein 2 [Source:MGI Symbol;Acc:MGI:1338076])

HSP 1 Score: 53.9138 bits (128), Expect = 8.869e-7
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Hivep2 (human immunodeficiency virus type I enhancer binding protein 2 [Source:MGI Symbol;Acc:MGI:1338076])

HSP 1 Score: 53.9138 bits (128), Expect = 8.869e-7
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Match: Zfp831 (zinc finger protein 831 [Source:MGI Symbol;Acc:MGI:3641861])

HSP 1 Score: 52.373 bits (124), Expect = 1.966e-6
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 2 
Query: 1391 AVVKQGEIETTG-YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            A+V  G ++ TG Y CPHC      P+ L+KHI  H+ ERP  C  CG+ +K + +L +H
Sbjct:  130 ALVSTGRVKNTGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCPTCGIAFKTQSNLYKH 189
[Close]
BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Match: sp|P31629|ZEP2_HUMAN (Transcription factor HIVEP2 OS=Homo sapiens OX=9606 GN=HIVEP2 PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 5.327e-6
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q00900|ZEP2_RAT (Human immunodeficiency virus type I enhancer-binding protein 2 homolog OS=Rattus norvegicus OX=10116 GN=Hivep2 PE=1 SV=2)

HSP 1 Score: 53.9138 bits (128), Expect = 5.604e-6
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q3UHF7|ZEP2_MOUSE (Transcription factor HIVEP2 OS=Mus musculus OX=10090 GN=Hivep2 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 6.204e-6
Identity = 25/56 (44.64%), Postives = 35/56 (62.50%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ CI CG ++K K +L +H  KSH  A+
Sbjct:  189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKH-RKSHAHAI 243
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A1S6KMJ7 (C2H2-type domain-containing protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 890.952 bits (2301), Expect = 0.000e+0
Identity = 444/444 (100.00%), Postives = 444/444 (100.00%), Query Frame = 2 
Query:  593 MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHLLARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKKFKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKRNDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWKLMRXXXXXXXXXXXXXXXAIIVVDQTPTQNNNTKILSMPTYVMS 1924
            MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHLLARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKKFKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKRNDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWKLMRNLSNSNSNNSPSDSSAIIVVDQTPTQNNNTKILSMPTYVMS
Sbjct:    1 MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHLLARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKKFKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKRNDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWKLMRNLSNSNSNNSPSDSSAIIVVDQTPTQNNNTKILSMPTYVMS 444
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A0R3TK39 (C2H2-type domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS7499 PE=4 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.296e-59
Identity = 91/132 (68.94%), Postives = 106/132 (80.30%), Query Frame = 2 
Query: 1214 GGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKK 1609
            G GKQP+  C +C   F SL DLNTHFL EH+  L +E    +SWK+ ++E I +Q+L+A +++G +E TGY CPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH  AVNPYKK
Sbjct:  102 GSGKQPIPRCFECKRLFPSLWDLNTHFLREHQSSLQREFTQNRSWKTCSLENISVQQLQATLRKGSVERTGYPCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHHHAVNPYKK 233
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A0R3SR85 (C2H2-type domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS7655 PE=4 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 7.871e-58
Identity = 95/169 (56.21%), Postives = 120/169 (71.01%), Query Frame = 2 
Query: 1115 STTLSKHSLSNFKNKASKIATTMTAVKSSRRTSG----GGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKK 1609
            STT+   S  N + K+    ++  +++S+          GKQP+  C +C   F SL DLNTHFL EH+  L +E    +SWK+ ++E   +Q+L+A +++G +E TGY CPHC+YFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH  AVNPYKK
Sbjct:   79 STTVFPASSGNNQRKSKATVSSGASLQSNHHGHHHHHGSGKQPIPRCFECKRLFPSLWDLNTHFLREHQSSLQREFTQNRSWKTCSLENTSVQQLQATLRKGSVERTGYPCPHCDYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHHHAVNPYKK 247
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A5J4NM65 (C2H2-type domain-containing protein (Fragment) OS=Paragonimus westermani OX=34504 GN=DEA37_0011429 PE=4 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 9.408e-58
Identity = 100/181 (55.25%), Postives = 120/181 (66.30%), Query Frame = 2 
Query: 1121 TLSKHSLSNFKNKASKIATTMTAVKSSRRTS----------GGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQ--------ELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKK 1609
            +++  SL+NF  +A   A  M +V     TS          G GKQPVT C QC   F +L +LN HF++EH   L  ELE AKSWKSHAVE +C +        E E  + QG +  TGY CP+C+YFAKWPTELQKHIMVHSKERPH+C+ICGL+YKWKWDLGRHFDKSH   +NPYKK
Sbjct:   15 SVTSKSLTNFDRQAVDGAVGMASVNFENPTSYRQVNRHSNAGPGKQPVTRCYQCKDLFPTLFELNAHFMHEHSDILKTELEHAKSWKSHAVESMCSKLSAKQLHSEFEQNLIQGTVNPTGYPCPYCQYFAKWPTELQKHIMVHSKERPHRCVICGLSYKWKWDLGRHFDKSHHKDMNPYKK 195
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A564Y841 (C2H2-type domain-containing protein (Fragment) OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS4051 PE=4 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 2.311e-57
Identity = 88/131 (67.18%), Postives = 104/131 (79.39%), Query Frame = 2 
Query: 1220 GKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKN 1612
            GKQP+  C +C   F SL DLNTHFL EH+  L +E    +SWK+ ++E   +Q+L+A +++G +E TGY CPHC+YFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH  AVNPYKK 
Sbjct:    1 GKQPIPRCFECKRLFPSLWDLNTHFLREHQSSLQREFTQNRSWKTCSLENTSVQQLQATLRKGSVERTGYPCPHCDYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHHHAVNPYKKT 131
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: hivep3b (HIVEP zinc finger 3 [Source:NCBI gene;Acc:103041574])

HSP 1 Score: 53.9138 bits (128), Expect = 5.663e-7
Identity = 24/52 (46.15%), Postives = 33/52 (63.46%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
            Y CP+C      P+ LQKHI  H+ ERP+ C+ CG ++K K +L +H  KSH
Sbjct:  132 YVCPYCGRPCAKPSVLQKHIRSHTGERPYPCVPCGFSFKTKSNLYKH-RKSH 182
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: hivep2b (transcription factor HIVEP2-like [Source:NCBI gene;Acc:103032669])

HSP 1 Score: 50.8322 bits (120), Expect = 5.877e-6
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 2 
Query: 1415 ETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            +T  Y C +C      P+ L+KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  AV
Sbjct:  116 KTGKYVCHYCGRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKH-RKSHTHAV 174
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: hivep2b (transcription factor HIVEP2-like [Source:NCBI gene;Acc:103032669])

HSP 1 Score: 50.8322 bits (120), Expect = 5.877e-6
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 2 
Query: 1415 ETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            +T  Y C +C      P+ L+KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  AV
Sbjct:  116 KTGKYVCHYCGRACAKPSVLKKHIRSHTGERPYPCVPCGFSFKTKSNLYKH-RKSHTHAV 174
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: hivep1 (HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512])

HSP 1 Score: 50.8322 bits (120), Expect = 5.907e-6
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            KQG+     Y C +C      P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  A+
Sbjct:   16 KQGK-----YVCEYCHRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSHAHAI 74
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Match: hivep1 (HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-070912-512])

HSP 1 Score: 50.447 bits (119), Expect = 6.701e-6
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 2 
Query: 1400 KQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            KQG+     Y C +C      P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  A+
Sbjct:  309 KQGK-----YVCEYCHRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSHAHAI 367
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000913.1 (pep scaffold:Pmarinus_7.0:GL476751:320862:328990:-1 gene:ENSPMAG00000000830.1 transcript:ENSPMAT00000000913.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 50.0618 bits (118), Expect = 1.643e-6
Identity = 25/56 (44.64%), Postives = 34/56 (60.71%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y CP+C      P+ L+KHI  H+ ERP+ C+ CG  +K K +L +H  KSH  AV
Sbjct:   11 YVCPYCGRACAKPSVLKKHIRSHTGERPY-CLACGFAFKTKSNLYKHR-KSHAHAV 64
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ctcf (CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5])

HSP 1 Score: 48.9062 bits (115), Expect = 3.662e-6
Identity = 32/126 (25.40%), Postives = 51/126 (40.48%), Query Frame = 2 
Query: 1229 PVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTG--YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNP 1600
            P   C  C +  A   DL  H   +H +       L +  +      I   E  A+++          ++C  CEY  K    +  H  VH+ E+P +C +C  T++ K  L  HF + H P+  P
Sbjct:  347 PKYHCPHCDAVIARKSDLGVHLRKQHAV-------LERELRCRYCRAI-FHERYALMQHQRTHRNEKRFKCDQCEYACKQERHMIMHKRVHTGEKPFECTLCDKTFRQKQLLDFHFKRYHDPSFVP 464
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004156.1 (pep scaffold:Pmarinus_7.0:GL477291:152018:166998:-1 gene:ENSPMAG00000003790.1 transcript:ENSPMAT00000004156.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 48.521 bits (114), Expect = 4.759e-6
Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
            Y C +C      P+ LQKHI  H+ ERP+ C  CG ++K K +L +H  KSH
Sbjct:   19 YICSYCGRACAKPSVLQKHIRSHTGERPYPCAPCGFSFKTKSNLYKH-RKSH 69
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Match: EDO46570 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPU6])

HSP 1 Score: 51.2174 bits (121), Expect = 4.764e-7
Identity = 26/70 (37.14%), Postives = 38/70 (54.29%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHD 1636
            Y+CPHC         LQ+HI++H+ ERP++C  C   +     L RH  K H P   P+ K+P S A+ +
Sbjct:  178 YKCPHCTKSFSISGNLQRHILIHTGERPYKCSKCPKAFNNPSHLSRHISKLHAP--QPHTKSPESYAYQE 245
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Match: EDO45483 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSV6])

HSP 1 Score: 49.6766 bits (117), Expect = 3.405e-6
Identity = 40/136 (29.41%), Postives = 58/136 (42.65%), Query Frame = 2 
Query: 1220 GKQPVTSCLQCSSSFASLIDLNTHFLNE-----HELCLI-KELELAKSWKSHAVEEI------CMQELEAVVKQGEIET-----TG---YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            G++P   C QC   FA   DL  H L       H+     K    A+  K+HA+         C Q  +   + G+++      TG   +QCP C       + L+ H + H+ E+PHQC  CG  +    DL RH
Sbjct:  231 GEKP-QQCPQCGKCFAQAGDLKRHALTHTGEKPHQCPQCGKYFAQARHLKTHALTHTGEKPHQCPQCGKFFARAGDLKRHALTHTGEKPHQCPQCGKCFALASSLKTHALTHTGEKPHQCPQCGKCFAQAGDLKRH 365
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Match: EDO40121 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S835])

HSP 1 Score: 48.1358 bits (113), Expect = 4.136e-6
Identity = 37/129 (28.68%), Postives = 56/129 (43.41%), Query Frame = 2 
Query: 1241 CLQCSSSFASLIDLNTHFL-----NEHEL-----CLIKELELAKSWKSHAVEE--ICMQELEAVVKQGEIET-----TG---YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            CLQC   FA    L TH L      EH+      C  +   L +   +H  E+   C+Q  +   + G ++T     TG   +QC  C         L++H + H+ E+PHQC+ CG  +    +L  H
Sbjct:   89 CLQCGKCFAQARHLKTHALTHTRKKEHQCPQCGKCFSQAGHLKRHALTHTEEKPHQCLQCGKCFTQAGNLKTHALTHTGEKPHQCLQCGKCFAQAGHLKRHALTHTGEKPHQCLQCGKCFTQAGNLKTH 217
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Match: EDO47703 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RLJ7])

HSP 1 Score: 45.8246 bits (107), Expect = 7.699e-6
Identity = 22/60 (36.67%), Postives = 35/60 (58.33%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYK 1606
            Y+CP+C+      + LQ HI  H+ +RPH+C +CG  +     L  H  ++HLP+  P+K
Sbjct:   66 YKCPYCDKGFNQKSNLQAHIFGHTGQRPHKCDVCGKGFTLASTLNTH-KRTHLPS-KPFK 123
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000044974.1 (ras-responsive element-binding protein 1 [Source:NCBI gene;Acc:101166659])

HSP 1 Score: 53.1434 bits (126), Expect = 1.026e-6
Identity = 36/124 (29.03%), Postives = 57/124 (45.97%), Query Frame = 2 
Query: 1196 SSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
             S +++  G++P   CL+C  +F     L  H  +       +  E  KS+K  ++  I  Q +   V+        +QCPHC    KW +  Q H+  H+ ERP+ C  CG ++K    L RH
Sbjct:  493 GSSKSTPAGERPY-RCLECGKAFKGSSGLKYHMRDHTGEKPYRCTECGKSFKRSSLLSI-HQRVHTGVR-------AFQCPHCPLTFKWSSHYQYHLRQHTGERPYVCKECGKSFKNTSCLRRH 607
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Match: zbtb10 (zinc finger and BTB domain containing 10 [Source:NCBI gene;Acc:105358630])

HSP 1 Score: 50.8322 bits (120), Expect = 4.505e-6
Identity = 27/102 (26.47%), Postives = 51/102 (50.00%), Query Frame = 2 
Query: 1262 FASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            F+SL + N    N+ +  ++++L+  +SW++     + + +L              +CPHC Y AK    L++H+++HS  R   C ICG  +  +  + RH
Sbjct:  560 FSSLSE-NAELANKIQYSILQDLQQGESWENGESSHLTLNKL--------------KCPHCNYIAKHRRTLKRHLIIHSGVRSFSCDICGKLFTRREHVKRH 646
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Match: hivep1 (HIVEP zinc finger 1 [Source:NCBI gene;Acc:101166887])

HSP 1 Score: 50.8322 bits (120), Expect = 4.946e-6
Identity = 23/56 (41.07%), Postives = 34/56 (60.71%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAV 1594
            Y C +C+     P+ L KHI  H+ ERP+ C+ CG ++K K +L +H  KSH  A+
Sbjct:  357 YVCEYCQRACAKPSVLLKHIRSHTGERPYPCVTCGFSFKTKSNLYKH-KKSHAHAI 411
[Close]
BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000040122.1 (zinc finger protein 831 [Source:NCBI gene;Acc:105353593])

HSP 1 Score: 50.447 bits (119), Expect = 7.560e-6
Identity = 18/45 (40.00%), Postives = 29/45 (64.44%), Query Frame = 2 
Query: 1433 CPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRH 1567
            CPHC      P+ L+KH+  H+ ERP+ C  CG+++K + +L +H
Sbjct:  111 CPHCGRDCMKPSVLEKHLRCHTGERPYPCTTCGVSFKTQSNLYKH 155
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BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000008285.2 (zinc finger X-chromosomal protein [Source:NCBI gene;Acc:101161181])

HSP 1 Score: 50.0618 bits (118), Expect = 7.637e-6
Identity = 38/122 (31.15%), Postives = 63/122 (51.64%), Query Frame = 2 
Query: 1220 GKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQ---ELEAVVKQG--EIETTGYQCPHCEYFAKWPTELQKHIM-VHSKERPHQCIICGLTYKWKWDLGRH 1567
            G++P  SCL C    A   +L TH   +H     KE+     +K     E C Q   E E +++ G    E   +QC HC++ +   ++L++HI+ VH+K+ PH+C +CG  +    +L +H
Sbjct:  459 GEKPY-SCLYCDYKSADSSNLKTHIKTKHS----KEM----PYKC----ERCFQTFAEEEELLQHGLTHEENKTHQCAHCDHKSSNSSDLKRHIISVHTKDYPHKCAVCGKGFHRPSELKKH 567
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000004948.1 (SMESG000004948.1)

HSP 1 Score: 888.641 bits (2295), Expect = 0.000e+0
Identity = 443/444 (99.77%), Postives = 443/444 (99.77%), Query Frame = 2 
Query:  593 MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHLLARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKKFKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATTMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKRNDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWKLMRXXXXXXXXXXXXXXXAIIVVDQTPTQNNNTKILSMPTYVMS 1924
            MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHLLARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKKFKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIAT MTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKRNDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWKLMRNLSNSNSNNSPSDSSAIIVVDQTPTQNNNTKILSMPTYVMS
Sbjct:    1 MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHLLARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKKFKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNHHHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATNMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAKSWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKRNDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWKLMRNLSNSNSNNSPSDSSAIIVVDQTPTQNNNTKILSMPTYVMS 444
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000010914.1 (SMESG000010914.1)

HSP 1 Score: 109.383 bits (272), Expect = 1.134e-26
Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 2 
Query: 1232 VTSCLQCSSSFASLIDLNTHFLNEHELCLIK---ELELAKS---WKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKK 1609
            V +C  C  +F ++  LN HF   HE  +IK    L+ ++S   +++H     C+ + +++ K         QCP C+Y AKWPTEL+KH+MVHS  RP  C IC  +YKW WDLGRHF K+H    NPY+K
Sbjct:  105 VITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDK--------LQCPSCQYRAKWPTELEKHVMVHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 228
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073676.1 (SMESG000073676.1)

HSP 1 Score: 53.5286 bits (127), Expect = 5.381e-7
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
            Y+C +C Y AK+ +EL++H  +H   +P  C+ C     WK DL RH +  H
Sbjct:  174 YKCSYCMYVAKYQSELKRHRRLHMGVKPFGCVFCKYRSAWKGDLKRHIESHH 225
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073676.1 (SMESG000073676.1)

HSP 1 Score: 53.5286 bits (127), Expect = 5.602e-7
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
            Y+C +C Y AK+ +EL++H  +H   +P  C+ C     WK DL RH +  H
Sbjct:  174 YKCSYCMYVAKYQSELKRHRRLHMGVKPFGCVFCKYRSAWKGDLKRHIESHH 225
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000073676.1 (SMESG000073676.1)

HSP 1 Score: 53.5286 bits (127), Expect = 5.696e-7
Identity = 20/52 (38.46%), Postives = 30/52 (57.69%), Query Frame = 2 
Query: 1427 YQCPHCEYFAKWPTELQKHIMVHSKERPHQCIICGLTYKWKWDLGRHFDKSH 1582
            Y+C +C Y AK+ +EL++H  +H   +P  C+ C     WK DL RH +  H
Sbjct:  174 YKCSYCMYVAKYQSELKRHRRLHMGVKPFGCVFCKYRSAWKGDLKRHIESHH 225
The following BLAST results are available for this feature:
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
HIVEP21.109e-644.64HIVEP zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4... [more]
HIVEP21.109e-644.64HIVEP zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4... [more]
HIVEP21.109e-644.64HIVEP zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:4... [more]
HIVEP15.299e-635.90HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4... [more]
HIVEP15.482e-635.90HIVEP zinc finger 1 [Source:HGNC Symbol;Acc:HGNC:4... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ztf-21.162e-838.36Zinc finger putative Transcription Factor family ... [more]
M03D4.44.069e-628.00pep chromosome:WBcel235:IV:6121773:6125198:-1 gene... [more]
M03D4.45.733e-628.00pep chromosome:WBcel235:IV:6121773:6127302:-1 gene... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
kmg6.731e-721.96gene:FBgn0032473 transcript:FBtr0080433[more]
CG34071.206e-628.89gene:FBgn0031573 transcript:FBtr0077515[more]
CG99321.994e-633.33gene:FBgn0262160 transcript:FBtr0336616[more]
CG99322.229e-633.33gene:FBgn0262160 transcript:FBtr0089956[more]
CG99322.266e-633.33gene:FBgn0262160 transcript:FBtr0336617[more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hivep2b4.204e-741.54HIVEP zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-130... [more]
ZNF3351.228e-637.93si:ch211-269m15.3 [Source:ZFIN;Acc:ZDB-GENE-141211... [more]
znf8311.724e-635.94zinc finger protein 831 [Source:ZFIN;Acc:ZDB-GENE-... [more]
hivep13.905e-640.00HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-0709... [more]
hivep14.159e-640.00HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-0709... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
zcrb11.120e-642.86zinc finger CCHC-type and RNA binding motif contai... [more]
pmepa11.123e-642.11prostate transmembrane protein, androgen induced 1... [more]
pmepa11.252e-642.11prostate transmembrane protein, androgen induced 1... [more]
gpr89b2.369e-640.35G protein-coupled receptor 89B [Source:Xenbase;Acc... [more]
gpr89b2.501e-640.35G protein-coupled receptor 89B [Source:Xenbase;Acc... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Hivep26.247e-744.64human immunodeficiency virus type I enhancer bindi... [more]
Hivep28.869e-744.64human immunodeficiency virus type I enhancer bindi... [more]
Hivep28.869e-744.64human immunodeficiency virus type I enhancer bindi... [more]
Hivep28.869e-744.64human immunodeficiency virus type I enhancer bindi... [more]
Zfp8311.966e-641.67zinc finger protein 831 [Source:MGI Symbol;Acc:MGI... [more]
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BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 3
Match NameE-valueIdentityDescription
sp|P31629|ZEP2_HUMAN5.327e-644.64Transcription factor HIVEP2 OS=Homo sapiens OX=960... [more]
sp|Q00900|ZEP2_RAT5.604e-644.64Human immunodeficiency virus type I enhancer-bindi... [more]
sp|Q3UHF7|ZEP2_MOUSE6.204e-644.64Transcription factor HIVEP2 OS=Mus musculus OX=100... [more]
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BLAST of C2H2-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S6KMJ70.000e+0100.00C2H2-type domain-containing protein OS=Schmidtea m... [more]
A0A0R3TK396.296e-5968.94C2H2-type domain-containing protein OS=Rodentolepi... [more]
A0A0R3SR857.871e-5856.21C2H2-type domain-containing protein OS=Hymenolepis... [more]
A0A5J4NM659.408e-5855.25C2H2-type domain-containing protein (Fragment) OS=... [more]
A0A564Y8412.311e-5767.18C2H2-type domain-containing protein (Fragment) OS=... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hivep3b5.663e-746.15HIVEP zinc finger 3 [Source:NCBI gene;Acc:10304157... [more]
hivep2b5.877e-641.67transcription factor HIVEP2-like [Source:NCBI gene... [more]
hivep2b5.877e-641.67transcription factor HIVEP2-like [Source:NCBI gene... [more]
hivep15.907e-640.00HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-0709... [more]
hivep16.701e-640.00HIVEP zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-0709... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 3
Match NameE-valueIdentityDescription
ENSPMAT00000000913.11.643e-644.64pep scaffold:Pmarinus_7.0:GL476751:320862:328990:-... [more]
ctcf3.662e-625.40CCCTC-binding factor (zinc finger protein) [Source... [more]
ENSPMAT00000004156.14.759e-644.23pep scaffold:Pmarinus_7.0:GL477291:152018:166998:-... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 4
Match NameE-valueIdentityDescription
EDO465704.764e-737.14Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO454833.405e-629.41Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO401214.136e-628.68Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO477037.699e-636.67Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000044974.11.026e-629.03ras-responsive element-binding protein 1 [Source:N... [more]
zbtb104.505e-626.47zinc finger and BTB domain containing 10 [Source:N... [more]
hivep14.946e-641.07HIVEP zinc finger 1 [Source:NCBI gene;Acc:10116688... [more]
ENSORLT00000040122.17.560e-640.00zinc finger protein 831 [Source:NCBI gene;Acc:1053... [more]
ENSORLT00000008285.27.637e-631.15zinc finger X-chromosomal protein [Source:NCBI gen... [more]
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BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000004948.10.000e+099.77SMESG000004948.1[more]
SMESG000010914.11.134e-2642.42SMESG000010914.1[more]
SMESG000073676.15.381e-738.46SMESG000073676.1[more]
SMESG000073676.15.602e-738.46SMESG000073676.1[more]
SMESG000073676.15.696e-738.46SMESG000073676.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30028022 ID=SMED30028022|Name=C2H2-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2004bp
GAATGACGGCTGCTGAAAAAGACACATGTATACCTGATATAAAAATATTT
TTCAATTCCTTAAAAATTTTCCAGAAATAAATTGCAATTATTCTCTGAGA
TAAACACGACAAAATATATAAACACACCTTATTTTACTTGACATCTTTCT
TTCCGTAAATACGTATCAATAAAATAAGGTATTCCATACACACACATACA
CACACACAGAGGAATTCTTAGACAATAGTCAGCATTTTAGACACAAACAC
ACACACTCACATACACAGGTAGACTAATAAGGCAAAGTGTCAGGACGATT
ATCCAATATACGCTACTGCTGAAATTTCGCGGGTTTGGTTTGGGACTTTT
TGTTCTACTCTTGCCAGTCAGGTGAAAGGGGATTGATTCAACAAATCACA
GCATTGCTGCATCAGGAGAGTAAAGAGAGAATTGCGAGCCATTATCGTCA
GAGTCGTTCGTGGATAACTGCGCAGAGAGAGCAACACATTAATTCAACAA
ATTAACTTTCGCAACCTCAGCACAAGAACGGAAGCATTATCCCTTTTATT
AATTGGTAACAACCCCAAACTAAAAAGATCCGATCAGAAGAAATGCAGTA
TAGTCCGTTTAAATATGATAACAATGAATCAAAACTCAAGCCCTACACGT
TTTCGCATAATAAGAAGCTTGTACAGTCCTCTACAAACAGATCCTTATCG
TTCCCGACCGTTTTGCCACCAATTGATCTCGCCTTTCATTTGTTAGCAAG
AAGAAATGGATTGTCAAATTTCTATTCTTCCTTAACCAACCTTATGAATC
TAAATCCATATATGGCGAGAACAATTTTCAATTCGAAGTTCCAAGAAGAA
AAAAAAGACCAAGAAACTCCATTAGATTTATCAGCCAAAAAATTTAAAAC
TCCTATTCAATTTGATTTAGCTTTGCAAATGCTGGCAAAAGTAGAAAACA
GTCGACGATTTACATTTCAAAACCCATTCGAACATTTTCAAAACAATAAC
AATGGATATCCAGCACTCATGCCGCCGATAATACAGAATCATCATCATTT
AAACGTCCTTCACTCCATGTATGAACGTACGTCGGGTGAAATGGTTCAAC
AAAACAATCTCATGTCCACAACATTGTCGAAACATTCATTATCAAATTTC
AAGAATAAAGCTTCAAAAATCGCCACAACCATGACTGCGGTTAAGTCATC
GAGAAGAACAAGTGGAGGTGGGAAACAACCTGTAACAAGCTGCCTGCAAT
GCTCTTCTTCTTTCGCTTCGCTCATAGATTTAAATACACATTTTCTAAAT
GAGCACGAATTGTGCTTGATAAAAGAACTGGAATTAGCAAAATCATGGAA
ATCTCATGCAGTTGAAGAAATCTGTATGCAAGAGCTCGAAGCTGTGGTAA
AACAAGGAGAAATAGAAACGACAGGATACCAATGTCCTCACTGTGAATAT
TTCGCTAAATGGCCTACAGAGCTGCAAAAGCACATCATGGTTCATTCGAA
AGAAAGACCTCATCAGTGTATTATATGCGGTCTCACATACAAATGGAAAT
GGGACCTTGGTAGACATTTCGACAAGAGTCATTTACCAGCAGTGAACCCG
TATAAAAAAAATCCAAATAGTTCAGCACATCATGATAAACGAAACGATTT
AAATTCATTTCGATCATTGACAACTTCATCACCGAACCTACATTCTGTAG
TATCAATGTGTTCTCCGAATTTCATTATTTCCTCTTCAGATTCTTTTGTT
AGAAAACCCAAACAATCCCTATCAGAAACAGACAGTTGGAAATTAATGAG
GAATTTGTCAAATTCCAATTCCAATAACTCCCCAAGTGATTCGTCAGCTA
TTATAGTCGTTGATCAAACGCCGACCCAGAATAACAACACGAAAATATTA
TCAATGCCTACTTATGTAATGAGTTAAAGGAAACAGATATTTGTAAAGGA
ATTTTTTTTACTGATTTTTCAATTATTTTTAATTATTCTTAGAATATATG
CATG
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protein sequence of SMED30028022-orf-1

>SMED30028022-orf-1 ID=SMED30028022-orf-1|Name=SMED30028022-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=445bp
MQYSPFKYDNNESKLKPYTFSHNKKLVQSSTNRSLSFPTVLPPIDLAFHL
LARRNGLSNFYSSLTNLMNLNPYMARTIFNSKFQEEKKDQETPLDLSAKK
FKTPIQFDLALQMLAKVENSRRFTFQNPFEHFQNNNNGYPALMPPIIQNH
HHLNVLHSMYERTSGEMVQQNNLMSTTLSKHSLSNFKNKASKIATTMTAV
KSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIKELELAK
SWKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIMV
HSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKKNPNSSAHHDKR
NDLNSFRSLTTSSPNLHSVVSMCSPNFIISSSDSFVRKPKQSLSETDSWK
LMRNLSNSNSNNSPSDSSAIIVVDQTPTQNNNTKILSMPTYVMS*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000099neuron
PLANA:0000418head
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR015880Znf_C2H2-like
IPR013087Znf_C2H2_type
IPR007087Znf_C2H2
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0046872metal ion binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 215..238
e-value: 4.6
score: 16.2
coord: 307..330
e-value: 0.27
score: 20.3
coord: 279..301
e-value: 0.0012
score: 28.1
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 309..330
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 217..238
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 279..306
score: 11.198
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 275..344
e-value: 1.9E-11
score: 45.8
NoneNo IPR availablePFAMPF13909zf-H2C2_5coord: 279..303
e-value: 1.5E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR24408FAMILY NOT NAMEDcoord: 215..370
NoneNo IPR availablePANTHERPTHR24408:SF34ZINC FINGER PROTEIN 672coord: 197..330
NoneNo IPR availablePANTHERPTHR24408:SF34ZINC FINGER PROTEIN 672coord: 215..370
NoneNo IPR availablePANTHERPTHR24408FAMILY NOT NAMEDcoord: 197..330
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 279..326