Polypyrimidine tract-binding protein 1
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30027927 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 7
Homology
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP1 (polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]) HSP 1 Score: 280.026 bits (715), Expect = 1.725e-86 Identity = 188/543 (34.62%), Postives = 284/543 (52.30%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLA-PTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D A + S G+ P +P L+ P + L + S + ++ + L +S V++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + + K RKMAL+Q+ +++ A+ ALI LH+ D+G + LRVSFSK I
Sbjct: 28 SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLDQTMAAAFGAPGIISASPYAGA----------------------GFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS---------VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 527
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP1 (polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]) HSP 1 Score: 280.411 bits (716), Expect = 3.617e-86 Identity = 188/543 (34.62%), Postives = 284/543 (52.30%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLA-PTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D A + S G+ P +P L+ P + L + S + ++ + L +S V++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + + K RKMAL+Q+ +++ A+ ALI LH+ D+G + LRVSFSK I
Sbjct: 58 SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLDQTMAAAFGAPGIISASPYAGA----------------------GFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS---------VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 557
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP1 (polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]) HSP 1 Score: 278.1 bits (710), Expect = 4.948e-85 Identity = 191/573 (33.33%), Postives = 288/573 (50.26%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL--------------------SGSGMHP-------------EAETAVKGANE--------------DVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLA-PTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L SG+ P A+ A++ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D A + S G+ P +P L+ P + L + S + ++ + L +S V++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + + K RKMAL+Q+ +++ A+ ALI LH+ D+G + LRVSFSK I
Sbjct: 58 SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELKTDSSPNQAVRGPAADPSSPGTSGVGPAAGAGDSRLCLPQRAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLDQTMAAAFGAPGIISASPYAGA----------------------GFPPTFAIPQAAGLSVPNVHGALAPLAIPSAAAAAAAAGRIAIPGLAGAGNS---------VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 588
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP1 (polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]) HSP 1 Score: 196.438 bits (498), Expect = 6.331e-55 Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + + K RKMAL+Q+ +++ A+ ALI LH+ D+G + LRVSFSK I
Sbjct: 333 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 531 HSP 2 Score: 118.242 bits (295), Expect = 1.512e-27 Identity = 80/244 (32.79%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMD 873
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D
Sbjct: 58 SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLD 290
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Match: PTBP1 (polypyrimidine tract binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9583]) HSP 1 Score: 196.438 bits (498), Expect = 7.511e-55 Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + + K RKMAL+Q+ +++ A+ ALI LH+ D+G + LRVSFSK I
Sbjct: 352 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 550 HSP 2 Score: 118.627 bits (296), Expect = 1.701e-27 Identity = 81/252 (32.14%), Postives = 131/252 (51.98%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYS 897
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D A ++
Sbjct: 58 SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLDQTMAAAFA 298
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 182.185 bits (461), Expect = 7.661e-51 Identity = 100/208 (48.08%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 1147 SSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
SS R N V++V+NL+E +++ DALF LFGVYGDV RVKILYNKK+ ALIQ+ + + A A+T+L+ V + + +RV SKHT++ MPK E Q L +DY++S LHRFK+ S+ NIYPP LHL+ +P S EE++K +F + +A+ K P KMAL QLE I+ AIDALI +H+ + + LRVSFSK I
Sbjct: 248 SSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPK-EGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-PKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 453 HSP 2 Score: 61.2326 bits (147), Expect = 1.184e-9 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 508 EGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
+ +P VL IEN + Y+LF RYG + RII F +N + QAL++ +A +AK L N + G +RI++S +L++K+ +D RDYT
Sbjct: 63 QQQPNSVLRTIIENMMFPVSLDV-LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 162
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 182.185 bits (461), Expect = 7.661e-51 Identity = 100/208 (48.08%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 1147 SSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
SS R N V++V+NL+E +++ DALF LFGVYGDV RVKILYNKK+ ALIQ+ + + A A+T+L+ V + + +RV SKHT++ MPK E Q L +DY++S LHRFK+ S+ NIYPP LHL+ +P S EE++K +F + +A+ K P KMAL QLE I+ AIDALI +H+ + + LRVSFSK I
Sbjct: 248 SSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPK-EGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-PKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 453 HSP 2 Score: 61.2326 bits (147), Expect = 1.184e-9 Identity = 36/101 (35.64%), Postives = 56/101 (55.45%), Query Frame = 1
Query: 508 EGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
+ +P VL IEN + Y+LF RYG + RII F +N + QAL++ +A +AK L N + G +RI++S +L++K+ +D RDYT
Sbjct: 63 QQQPNSVLRTIIENMMFPVSLDV-LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 162
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: ptb-1 (PTB (HnRNP) homolog; Putative RNA-binding protein PTB-1a [Source:UniProtKB/TrEMBL;Acc:Q18999]) HSP 1 Score: 182.57 bits (462), Expect = 9.520e-50 Identity = 100/208 (48.08%), Postives = 137/208 (65.87%), Query Frame = 1
Query: 1147 SSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
SS R N V++V+NL+E +++ DALF LFGVYGDV RVKILYNKK+ ALIQ+ + + A A+T+L+ V + + +RV SKHT++ MPK E Q L +DY++S LHRFK+ S+ NIYPP LHL+ +P S EE++K +F + +A+ K P KMAL QLE I+ AIDALI +H+ + + LRVSFSK I
Sbjct: 410 SSMRFPMINLTPVILVSNLHEMKVTTDALFTLFGVYGDVMRVKILYNKKDNALIQYSEPQQAQLALTHLDKVKWHDRLIRVAPSKHTNVQMPK-EGQPDAGLTRDYAHSTLHRFKKPGSKNYLNIYPPCATLHLSNIPTSVSEEKLKEMFAEAGFAVKAFKFF-PKDHKMALCQLEDIETAIDALIAMHNHKLAENAHLRVSFSKSGI 615 HSP 2 Score: 86.2705 bits (212), Expect = 1.971e-17 Identity = 60/207 (28.99%), Postives = 105/207 (50.72%), Query Frame = 1
Query: 196 ISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
+S+V+H+RN+ D+ + ++ L I +G +S ++ + QA +E E SA A V + G+ + Q+S + L + + E+ G+ + + +P VL IEN + Y+LF RYG + RII F +N + QAL++ +A +AK L N + G +RI++S +L++K+ +D RDYT
Sbjct: 119 VSKVVHVRNIPPDLVDVELMQLCIQYGPVSNYMMLKGKSQAFVEYEEEASAAAFVSGMTAVPIQIRGRTLFAQYSTHRELKFDKNKAISDTESVANGSVSNFEVGTQQQPNSVLRTIIENMMFPVSLDV-LYQLFTRYGKVLRIITFNKNNTFQALVQMSEANSAQLAKQGLENQNVYNGCCTLRIDYSKLSTLNVKYNNDKSRDYT 324
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: hrpl-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) L homolog [Source:UniProtKB/TrEMBL;Acc:Q95QR5]) HSP 1 Score: 77.7962 bits (190), Expect = 7.646e-15 Identity = 113/524 (21.56%), Postives = 197/524 (37.60%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEFSTRKSLDIKHESDTGRDY--------------TISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYG-----KPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITK-VKM-INP--NQRKMA-LVQLETIDMAIDAL 1695
S V+H+RN+ VTE D+ FG ++Y + AL+E E A+A V++ + + G+ + +S + + G E+A P VL VT+ N + + Y++ G + R+ V + QAL+EFE+ A AK + G++ + G +++EF+ + ++ + RD+ T+ P + D+ P + D H +Y Y S +GG ++ G SR ++ + ++ + G V+++ L +I+ D LF + YG+V R+ + K T +I+ E + L L+G KP H P+ S KDYS+SR RF I P LH P + +E+ + +L + K VK+ I P N+R A + ET+++A + L
Sbjct: 31 SIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIEGAKACVNFATSNQINVGGQGALFNYSTSQCIERMGF----ESAT--------------PNKVLVVTVLNAQYPIDADV-IYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNESFQDTGRKTLIPAKPDDHYRRPYEDDRNHYDRH---DYQAPSSYGYSSRGGGHSD----------------------------------------YYGGDRGGPPHPPPSRYR---DDYEDRGYAQPAGGGPGCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPEERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPDGSPSF---KDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHKPVKIDIFPSRNERSAAGTAEFETVEIANEVL 486
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Match: hrpl-1 (Heterogeneous nuclear RibonucleoProtein (HnRNP) L homolog [Source:UniProtKB/TrEMBL;Acc:Q95QR5]) HSP 1 Score: 77.7962 bits (190), Expect = 7.646e-15 Identity = 113/524 (21.56%), Postives = 197/524 (37.60%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEFSTRKSLDIKHESDTGRDY--------------TISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYG-----KPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITK-VKM-INP--NQRKMA-LVQLETIDMAIDAL 1695
S V+H+RN+ VTE D+ FG ++Y + AL+E E A+A V++ + + G+ + +S + + G E+A P VL VT+ N + + Y++ G + R+ V + QAL+EFE+ A AK + G++ + G +++EF+ + ++ + RD+ T+ P + D+ P + D H +Y Y S +GG ++ G SR ++ + ++ + G V+++ L +I+ D LF + YG+V R+ + K T +I+ E + L L+G KP H P+ S KDYS+SR RF I P LH P + +E+ + +L + K VK+ I P N+R A + ET+++A + L
Sbjct: 31 SIVVHVRNLHQKVTEADLLEALSNFGPVAYATCIPHSRMALVEFEDIEGAKACVNFATSNQINVGGQGALFNYSTSQCIERMGF----ESAT--------------PNKVLVVTVLNAQYPIDADV-IYQISNAQGKVLRVAVMHKPTVVQALVEFESMEVAKAAKHAMNGADIYSGCCTLKVEFAKPDRVRVQRQDKDQRDFTLPDNESFQDTGRKTLIPAKPDDHYRRPYEDDRNHYDRH---DYQAPSSYGYSSRGGGHSD----------------------------------------YYGGDRGGPPHPPPSRYR---DDYEDRGYAQPAGGGPGCVMMIYGLEHGKINCDMLFNILCQYGNVLRISFMRTKTETGIIELGTPEERQNVLDFLQGSALFGLTLEFKPSHQECVHHLRDPFLLPDGSPSF---KDYSSSRNQRFSTPELAAKNRIIFPTNTLHWFNAPGTMDEQALLDLMAEKTEHKPVKIDIFPSRNERSAAGTAEFETVEIANEVL 486
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0112865) HSP 1 Score: 265.003 bits (676), Expect = 1.282e-80 Identity = 190/576 (32.99%), Postives = 288/576 (50.00%), Query Frame = 1
Query: 187 VDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL---------------------SGS-------------------------GMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWE-GSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
+ K S+V+H+RN+ ++ E D+ L IPFG ++ +++ + QA +EM E SA +MV Y+ P G+ + +QFS + L SGS G+ G N + G P VL V +E+ L LH ++FQRYG + +I+ F +N S QALI++ + +A AK L G N + G +RI+ S +L++K+ +D RD+T +P + ++ G+ + + P S G + NG L + N+ LP L + SL N G++ + + YSN V++V+NLNE+ ++PDALF LFGVYGDVQRVKILYNKK++ALIQ + + A A+++L+ + L+GKP+RV SKH ++ +PK E Q L +DYS + LHRFK+ S+ QNIYPP LHL+ +P S E++IK F + + + K P RKMAL+QL +++ A+ ALIK+H+ + S LRVSFSK I
Sbjct: 29 IAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN----AAGGPNTVLRVIVESLMYPVSLDILH--QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFT-NPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRP-SLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF-----SLANS---GALQTTAPAMRGYSN------------------VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK-EGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 568
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300268) HSP 1 Score: 264.618 bits (675), Expect = 2.508e-80 Identity = 190/576 (32.99%), Postives = 288/576 (50.00%), Query Frame = 1
Query: 187 VDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL---------------------SGS-------------------------GMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWE-GSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
+ K S+V+H+RN+ ++ E D+ L IPFG ++ +++ + QA +EM E SA +MV Y+ P G+ + +QFS + L SGS G+ G N + G P VL V +E+ L LH ++FQRYG + +I+ F +N S QALI++ + +A AK L G N + G +RI+ S +L++K+ +D RD+T +P + ++ G+ + + P S G + NG L + N+ LP L + SL N G++ + + YSN V++V+NLNE+ ++PDALF LFGVYGDVQRVKILYNKK++ALIQ + + A A+++L+ + L+GKP+RV SKH ++ +PK E Q L +DYS + LHRFK+ S+ QNIYPP LHL+ +P S E++IK F + + + K P RKMAL+QL +++ A+ ALIK+H+ + S LRVSFSK I
Sbjct: 42 IAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN----AAGGPNTVLRVIVESLMYPVSLDILH--QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFT-NPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRP-SLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF-----SLANS---GALQTTAPAMRGYSN------------------VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK-EGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 581
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300269) HSP 1 Score: 264.618 bits (675), Expect = 2.508e-80 Identity = 190/576 (32.99%), Postives = 288/576 (50.00%), Query Frame = 1
Query: 187 VDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL---------------------SGS-------------------------GMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWE-GSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
+ K S+V+H+RN+ ++ E D+ L IPFG ++ +++ + QA +EM E SA +MV Y+ P G+ + +QFS + L SGS G+ G N + G P VL V +E+ L LH ++FQRYG + +I+ F +N S QALI++ + +A AK L G N + G +RI+ S +L++K+ +D RD+T +P + ++ G+ + + P S G + NG L + N+ LP L + SL N G++ + + YSN V++V+NLNE+ ++PDALF LFGVYGDVQRVKILYNKK++ALIQ + + A A+++L+ + L+GKP+RV SKH ++ +PK E Q L +DYS + LHRFK+ S+ QNIYPP LHL+ +P S E++IK F + + + K P RKMAL+QL +++ A+ ALIK+H+ + S LRVSFSK I
Sbjct: 42 IAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN----AAGGPNTVLRVIVESLMYPVSLDILH--QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFT-NPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRP-SLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF-----SLANS---GALQTTAPAMRGYSN------------------VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK-EGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 581
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0300267) HSP 1 Score: 264.618 bits (675), Expect = 2.508e-80 Identity = 190/576 (32.99%), Postives = 288/576 (50.00%), Query Frame = 1
Query: 187 VDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL---------------------SGS-------------------------GMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWE-GSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
+ K S+V+H+RN+ ++ E D+ L IPFG ++ +++ + QA +EM E SA +MV Y+ P G+ + +QFS + L SGS G+ G N + G P VL V +E+ L LH ++FQRYG + +I+ F +N S QALI++ + +A AK L G N + G +RI+ S +L++K+ +D RD+T +P + ++ G+ + + P S G + NG L + N+ LP L + SL N G++ + + YSN V++V+NLNE+ ++PDALF LFGVYGDVQRVKILYNKK++ALIQ + + A A+++L+ + L+GKP+RV SKH ++ +PK E Q L +DYS + LHRFK+ S+ QNIYPP LHL+ +P S E++IK F + + + K P RKMAL+QL +++ A+ ALIK+H+ + S LRVSFSK I
Sbjct: 42 IAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN----AAGGPNTVLRVIVESLMYPVSLDILH--QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFT-NPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRP-SLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF-----SLANS---GALQTTAPAMRGYSN------------------VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK-EGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 581
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Match: heph (gene:FBgn0011224 transcript:FBtr0085880) HSP 1 Score: 264.618 bits (675), Expect = 2.508e-80 Identity = 190/576 (32.99%), Postives = 288/576 (50.00%), Query Frame = 1
Query: 187 VDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL---------------------SGS-------------------------GMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWE-GSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
+ K S+V+H+RN+ ++ E D+ L IPFG ++ +++ + QA +EM E SA +MV Y+ P G+ + +QFS + L SGS G+ G N + G P VL V +E+ L LH ++FQRYG + +I+ F +N S QALI++ + +A AK L G N + G +RI+ S +L++K+ +D RD+T +P + ++ G+ + + P S G + NG L + N+ LP L + SL N G++ + + YSN V++V+NLNE+ ++PDALF LFGVYGDVQRVKILYNKK++ALIQ + + A A+++L+ + L+GKP+RV SKH ++ +PK E Q L +DYS + LHRFK+ S+ QNIYPP LHL+ +P S E++IK F + + + K P RKMAL+QL +++ A+ ALIK+H+ + S LRVSFSK I
Sbjct: 42 IAKASKVIHLRNIPNESGEADVIALGIPFGRVTNVLVLKGKNQAFIEMADEISATSMVSCYTVTPPQMRGRMVYVQFSNHRELKTDQGHNNSTAHSDYSVQSPASGSPLPLSAAANATSNNANSSSDSNSAMGILQNTSAVNAGGNTN----AAGGPNTVLRVIVESLMYPVSLDILH--QIFQRYGKVLKIVTFTKNNSFQALIQYPDANSAQHAKSLLDGQNIYNGCCTLRIDNSKLTALNVKYNNDKSRDFT-NPALPPGEPGVDIMPTAGGLMNTNDLLLIAARQRP-SLSGDKIVNGLGAPGVLPPFALGLGTPLTGGYNNALPNLAAF-----SLANS---GALQTTAPAMRGYSN------------------VLLVSNLNEEMVTPDALFTLFGVYGDVQRVKILYNKKDSALIQMAEPQQAYLAMSHLDKLRLWGKPIRVMASKHQAVQLPK-EGQPDAGLTRDYSQNPLHRFKKPGSKNYQNIYPPSATLHLSNIPSSCSEDDIKEAFTSNSFEVKAFKFF-PKDRKMALLQLLSVEEAVLALIKMHNHQLSESNHLRVSFSKSNI 581
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp1a (polypyrimidine tract binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-492]) HSP 1 Score: 191.045 bits (484), Expect = 7.105e-53 Identity = 97/198 (48.99%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
NSV++V+NLN + ++P LFILFGVYGDV RVKIL+NKK AL+Q DG A A+++LN LYGK +R SKHT++ +P+ E L KDYSNS LHRFK+ S+ NI+PP + LHL+ +P S E++++ LF A+ K RKMAL+QL +++ AI++LIK H+ D+G + LRVSFSK I
Sbjct: 378 GNSVLLVSNLNPESVTPQCLFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLAMSHLNGQKLYGKALRATLSKHTTVQLPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVTEDDLRGLFLSSGAVVKAFKFFQKDRKMALIQLASVEEAIESLIKFHNHDLGENHHLRVSFSKSTI 574 HSP 2 Score: 120.168 bits (300), Expect = 2.951e-28 Identity = 79/235 (33.62%), Postives = 126/235 (53.62%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKGAN---------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKD--ELNSIPSFNS 858
SRV+H+R + +D+ E ++ +L +PFG ++ L++ + QA +EM+ EESAQ MV YYS P I +Q+S ++ L S A+ A++ N + G VL V +EN + L LH ++F ++GT+ +II F +N QAL+++ + + A AKL L G N + +RI FS SL++K+ +D RDYT R D +S PSF++
Sbjct: 73 SRVIHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEESAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGGMSLAAIDGAGMGSQSPVLRVIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALVQYSDGMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYT----RPDLPTGDSQPSFDA 301
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp1b (polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]) HSP 1 Score: 187.963 bits (476), Expect = 6.804e-52 Identity = 96/195 (49.23%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 1183 VVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDY-AITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
V++V+NLN +R++P LFILFGVYGDV RVKI++NKK ALIQ DG A A+++LN LYG+P+R+ SKHT++ MP+ E L KDYSNS LHRFK+ S+ NI+PP + LHL+ +P S E+++K LF A+ K RKMAL+Q+ +++ AI++LI+ H+ D+G + LRVSFSK I
Sbjct: 362 VMLVSNLNPERVTPHCLFILFGVYGDVLRVKIMFNKKENALIQMSDGTQAQLAMSHLNGQKLYGRPLRITLSKHTTVQMPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQFHNHDLGENHHLRVSFSKSTI 555 HSP 2 Score: 121.709 bits (304), Expect = 9.509e-29 Identity = 84/264 (31.82%), Postives = 134/264 (50.76%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKGANE-DVRKLCEG--------EPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDH------------GNANYSQHHDYP 915
SRV+H+R + +D+ E ++ L +PFG ++ L++ + QA +EM+ EE+AQ MV YYS P I +Q+S ++ L S A+ A++ N L G P VL V +EN + L LH ++F ++GT+ ++I F +N QAL++F + + A AKL L G N + G +RI FS SL++K+ +D RDYT R D +P+ +S ++ H A Y+ H +P
Sbjct: 61 SRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLH--QIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYNGCCTLRISFSKLTSLNVKYNNDKSRDYT----RPD----LPTGDSQPALEHHAVAAAFAAPGIISAAPYASAHAFP 314
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp1b (polypyrimidine tract binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9796]) HSP 1 Score: 187.963 bits (476), Expect = 7.120e-52 Identity = 96/195 (49.23%), Postives = 134/195 (68.72%), Query Frame = 1
Query: 1183 VVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDY-AITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
V++V+NLN +R++P LFILFGVYGDV RVKI++NKK ALIQ DG A A+++LN LYG+P+R+ SKHT++ MP+ E L KDYSNS LHRFK+ S+ NI+PP + LHL+ +P S E+++K LF A+ K RKMAL+Q+ +++ AI++LI+ H+ D+G + LRVSFSK I
Sbjct: 371 VMLVSNLNPERVTPHCLFILFGVYGDVLRVKIMFNKKENALIQMSDGTQAQLAMSHLNGQKLYGRPLRITLSKHTTVQMPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKLLFGSSGALVKNFKFFQKDRKMALIQMSSVEEAIESLIQFHNHDLGENHHLRVSFSKSTI 564 HSP 2 Score: 122.094 bits (305), Expect = 8.421e-29 Identity = 84/264 (31.82%), Postives = 134/264 (50.76%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKGANE-DVRKLCEG--------EPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDH------------GNANYSQHHDYP 915
SRV+H+R + +D+ E ++ L +PFG ++ L++ + QA +EM+ EE+AQ MV YYS P I +Q+S ++ L S A+ A++ N L G P VL V +EN + L LH ++F ++GT+ ++I F +N QAL++F + + A AKL L G N + G +RI FS SL++K+ +D RDYT R D +P+ +S ++ H A Y+ H +P
Sbjct: 70 SRVIHVRKLPNDINEAEVIALGLPFGKVTNLLMLKGKNQAFLEMNSEEAAQTMVTYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSLTLGGVDPSGMTGPSPVLRVIVENLFYPVTLDVLH--QIFSKFGTVLKVITFTKNNQFQALLQFTDGLTAQHAKLALDGQNIYNGCCTLRISFSKLTSLNVKYNNDKSRDYT----RPD----LPTGDSQPALEHHAVAAAFAAPGIISAAPYASAHAFP 323
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 187.193 bits (474), Expect = 8.632e-52 Identity = 100/198 (50.51%), Postives = 131/198 (66.16%), Query Frame = 1
Query: 1177 NSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SV++V+NLN D ISP LFILFGVYGDV RVKIL+NKK ALIQ D A A+++LN LYGK +RV SKH ++ +P+ E Q L KD+S S LHRFK+ S+ QNI+PP LHL+ +P S ++ +K+LF Y + K RKMAL+QL +++ AI ALI LH+ D+G + LRVSFSK I
Sbjct: 327 HSVLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTVQLPR-EGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQ-KDRKMALIQLGSVEEAIQALIHLHNHDLGENHHLRVSFSKSTI 522 HSP 2 Score: 121.324 bits (303), Expect = 8.685e-29 Identity = 74/232 (31.90%), Postives = 124/232 (53.45%), Query Frame = 1
Query: 169 GGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGM--HPEAETAVKGAN---------------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
G + C SRVLH+R V +V+E ++ +L +PFG ++ L++ + QA +EM EE+A MV+YY+ PH + + IQ+S + L + A+ A++ N D + P VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + + AH AK+ L G N + G +R+EFS SL++K+ +D RD+T
Sbjct: 20 GDRSPCAP--SRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSP--VLRIIVENLYYPVSLEVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTSLNVKYNNDKSRDFT 245
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 187.193 bits (474), Expect = 8.632e-52 Identity = 100/198 (50.51%), Postives = 131/198 (66.16%), Query Frame = 1
Query: 1177 NSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SV++V+NLN D ISP LFILFGVYGDV RVKIL+NKK ALIQ D A A+++LN LYGK +RV SKH ++ +P+ E Q L KD+S S LHRFK+ S+ QNI+PP LHL+ +P S ++ +K+LF Y + K RKMAL+QL +++ AI ALI LH+ D+G + LRVSFSK I
Sbjct: 327 HSVLLVSNLNPDSISPHELFILFGVYGDVHRVKILFNKKENALIQMADATQAQLAMSHLNGQRLYGKVIRVTISKHQTVQLPR-EGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSTTDDFLKDLFASSGYTVKAFKFFQ-KDRKMALIQLGSVEEAIQALIHLHNHDLGENHHLRVSFSKSTI 522 HSP 2 Score: 121.324 bits (303), Expect = 8.685e-29 Identity = 74/232 (31.90%), Postives = 124/232 (53.45%), Query Frame = 1
Query: 169 GGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGM--HPEAETAVKGAN---------------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
G + C SRVLH+R V +V+E ++ +L +PFG ++ L++ + QA +EM EE+A MV+YY+ PH + + IQ+S + L + A+ A++ N D + P VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + + AH AK+ L G N + G +R+EFS SL++K+ +D RD+T
Sbjct: 20 GDRSPCAP--SRVLHVRKVPIEVSEAEVVSLGVPFGKVTNLLMLKGKNQAFIEMASEEAAMTMVNYYTTATPHVRNQPVYIQYSNHRELKTDNLPNQGRAQAALQAVNAVHTGNMSLSGTATASDGGMMPGQSP--VLRIIVENLYYPVSLEVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNGCCTLRVEFSKLTSLNVKYNNDKSRDFT 245
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: ptbp1 (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:496557]) HSP 1 Score: 195.282 bits (495), Expect = 2.630e-54 Identity = 99/199 (49.75%), Postives = 138/199 (69.35%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
NSV++V+NLN +R++P LFILFGVYGDV RVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDYS S LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + Y + K + RKMAL+Q+ +++ AI++LI+LH+ D+G + LRVSFSK I
Sbjct: 373 GNSVLLVSNLNPERVTPQCLFILFGVYGDVHRVKILFNKKENALVQMADGNQAQLAMSHLNGQRLHGKPLRITVSKHQTVQLPR-EGQEDQGLTKDYSTSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKMLFSNNGYTVKGFKFFQKD-RKMALIQMGSVEEAIESLIELHNHDMGENHHLRVSFSKSTI 569 HSP 2 Score: 110.538 bits (275), Expect = 6.410e-25 Identity = 68/221 (30.77%), Postives = 115/221 (52.04%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSG---------MHPEAETAVKGANEDVRKLCEGEPKL-------VLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRV+H+R + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A M++YY+ P + I IQ+S ++ L + V G + + VL + +EN + L L ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT
Sbjct: 62 SRVIHVRKLPGDVTEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAANTMINYYTNVAPVLRSQPIYIQYSNHKELKTDNSPNQARAQAALQAVNSVVSGTTALSASAAAVDAGMAMSGQSPVLRIIVENLFYPVTLDVLQ--QIFSKFGTVLKIITFTKNNQFQALLQYGDPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT 280
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: htr4 (5-hydroxytryptamine (serotonin) receptor 4, G protein-coupled [Source:Xenbase;Acc:XB-GENE-993770]) HSP 1 Score: 186.808 bits (473), Expect = 2.030e-51 Identity = 97/198 (48.99%), Postives = 138/198 (69.70%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQ-RKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
N+V++V+NLNE+ +SP +LF LFGVYGDVQRVKILYNKK++ALIQ DG + A+++LN +YGK +RV SKH ++ +P+ E + L KD+SNS LHRFK+ S+ QNI+PP LHL+ +P++ E++++ LF + VK Q KMAL+Q+ T++ AI ALI LH+ ++G + LRVSFSK I
Sbjct: 336 GNTVLLVSNLNEEMVSPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPR-EGLDDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPQNITEDDLRTLFTNTG-GNVKAFKFFQDHKMALLQMSTVEEAIQALIDLHNYNIGDNHHLRVSFSKSTI 531 HSP 2 Score: 126.331 bits (316), Expect = 3.622e-30 Identity = 75/218 (34.40%), Postives = 124/218 (56.88%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL-SGSGMHPEAE------TAVKGANEDVRKLCEGEPKL------VLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + +VTE ++ L +PFG ++ +++ + QA +E+ EE+A MV+YY+ PH + I IQ+S ++ L + S ++ A+ TAV+ +N V E + VL + I+N + L LH ++F ++GT+ +II F +N QAL+++ + V A AKL L G N + +RI+FS +L++K+ +D RDYT
Sbjct: 58 SRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAASTMVNYYTTITPHLRNQPIYIQYSNHKELKTDSALNQRAQAVLQAVTAVQTSNSSVTSTAANENTVSSAQSPVLRIIIDNMYYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYT 273
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 181.03 bits (458), Expect = 1.955e-49 Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SV++V+NLN D I P LFILFGVYGDVQRVKIL+NKK AL+Q D A A+++LN L+G+ +R+ SKH S+ +P+ E L KDY+NS LHRFK+ S+ QNI+PP LHL+ +P +E++K LF ++ K RKMAL+QL +++ AI ALI+LH+ D+G + LRVSFSK I
Sbjct: 323 GHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPR-EGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQ-KDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKSMI 519 HSP 2 Score: 120.553 bits (301), Expect = 2.599e-28 Identity = 78/226 (34.51%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYE---------------------TLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + +DVTE +I +L +PFG ++ L++ + QA +EM EE+A +MV+YY+ PH + + IQ+S + TL G+ T+V G V L P VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + + AH AK+ L G N + +RIEFS SL++K+ +D RD+T
Sbjct: 27 SRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGL---TLTSVPGGEGLV--LSGQSP--VLRIIVENLFYPVTLEVLH--QIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTSLNVKYNNDKSRDFT 243
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 181.03 bits (458), Expect = 2.070e-49 Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SV++V+NLN D I P LFILFGVYGDVQRVKIL+NKK AL+Q D A A+++LN L+G+ +R+ SKH S+ +P+ E L KDY+NS LHRFK+ S+ QNI+PP LHL+ +P +E++K LF ++ K RKMAL+QL +++ AI ALI+LH+ D+G + LRVSFSK I
Sbjct: 334 GHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPR-EGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQ-KDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKSMI 530 HSP 2 Score: 120.553 bits (301), Expect = 2.571e-28 Identity = 78/226 (34.51%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYE---------------------TLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + +DVTE +I +L +PFG ++ L++ + QA +EM EE+A +MV+YY+ PH + + IQ+S + TL G+ T+V G V L P VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + + AH AK+ L G N + +RIEFS SL++K+ +D RD+T
Sbjct: 38 SRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGL---TLTSVPGGEGLV--LSGQSP--VLRIIVENLFYPVTLEVLH--QIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTSLNVKYNNDKSRDFT 254
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Match: taco1 (translational activator of mitochondrially encoded cytochrome c oxidase I [Source:Xenbase;Acc:XB-GENE-986962]) HSP 1 Score: 181.03 bits (458), Expect = 2.107e-49 Identity = 96/199 (48.24%), Postives = 131/199 (65.83%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF--DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SV++V+NLN D I P LFILFGVYGDVQRVKIL+NKK AL+Q D A A+++LN L+G+ +R+ SKH S+ +P+ E L KDY+NS LHRFK+ S+ QNI+PP LHL+ +P +E++K LF ++ K RKMAL+QL +++ AI ALI+LH+ D+G + LRVSFSK I
Sbjct: 326 GHSVLLVSNLNPDAILPHGLFILFGVYGDVQRVKILFNKKENALVQMTDATQAQLAMSHLNGQRLHGRVLRITLSKHQSVQLPR-EGHEDQGLTKDYTNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPLVTDEDLKRLFASTGCSVKGFKFFQ-KDRKMALIQLGSVEEAILALIELHNHDLGENHHLRVSFSKSMI 522 HSP 2 Score: 120.168 bits (300), Expect = 3.549e-28 Identity = 78/226 (34.51%), Postives = 122/226 (53.98%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYE---------------------TLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + +DVTE +I +L +PFG ++ L++ + QA +EM EE+A +MV+YY+ PH + + IQ+S + TL G+ T+V G V L P VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + + AH AK+ L G N + +RIEFS SL++K+ +D RD+T
Sbjct: 30 SRVLHIRKIPNDVTESEIISLGLPFGKVTNLLMLKGKSQAFLEMASEEAAVSMVNYYTPVPPHVRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVNTLQSGGL---TLTSVPGGEGLV--LSGQSP--VLRIIVENLFYPVTLEVLH--QIFSKFGTVIKIITFTKNNQFQALLQYADPMNAHHAKVALDGQNIYNACCTLRIEFSKLTSLNVKYNNDKSRDFT 246
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp1 (polypyrimidine tract binding protein 1 [Source:MGI Symbol;Acc:MGI:97791]) HSP 1 Score: 278.87 bits (712), Expect = 8.747e-86 Identity = 185/543 (34.07%), Postives = 283/543 (52.12%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLA-PTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
SRV+H+R + SDVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D A + S G+ P +P L+ P + G++ + GN+ V++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GK +R+ SKH S+ +P+ E Q L KDY +S LHRFK+ S+ QNI+PP LHL+ +P S E+++K+LF + + K RKMAL+Q+ +++ A+ ALI+LH+ D+G + LRVSFSK I
Sbjct: 57 SRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLDQTMAAAFGAPGIMSASPYAGA----------------------GFPPTFAIPQAAGLSVPNV--------HGALAPLAIPSAAAAAAASRIAIPGLAGAGNS--VLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQSVQLPR-EGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 555
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp1 (polypyrimidine tract binding protein 1 [Source:MGI Symbol;Acc:MGI:97791]) HSP 1 Score: 193.356 bits (490), Expect = 2.235e-54 Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GK +R+ SKH S+ +P+ E Q L KDY +S LHRFK+ S+ QNI+PP LHL+ +P S E+++K+LF + + K RKMAL+Q+ +++ A+ ALI+LH+ D+G + LRVSFSK I
Sbjct: 291 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQSVQLPR-EGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 489 HSP 2 Score: 97.0561 bits (240), Expect = 7.936e-21 Identity = 70/226 (30.97%), Postives = 114/226 (50.44%), Query Frame = 1
Query: 253 ANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMD 873
A+ +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D
Sbjct: 35 ASAGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLD 249
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp1 (polypyrimidine tract binding protein 1 [Source:MGI Symbol;Acc:MGI:97791]) HSP 1 Score: 193.356 bits (490), Expect = 5.204e-54 Identity = 98/200 (49.00%), Postives = 138/200 (69.00%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GK +R+ SKH S+ +P+ E Q L KDY +S LHRFK+ S+ QNI+PP LHL+ +P S E+++K+LF + + K RKMAL+Q+ +++ A+ ALI+LH+ D+G + LRVSFSK I
Sbjct: 331 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQSVQLPR-EGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 529 HSP 2 Score: 120.168 bits (300), Expect = 2.952e-28 Identity = 80/244 (32.79%), Postives = 129/244 (52.87%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMD 873
SRV+H+R + SDVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D
Sbjct: 57 SRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLD 289
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp2 (polypyrimidine tract binding protein 2 [Source:MGI Symbol;Acc:MGI:1860489]) HSP 1 Score: 187.963 bits (476), Expect = 5.260e-52 Identity = 99/199 (49.75%), Postives = 137/199 (68.84%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQR--KMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
N+V++V+NLNE+ ++P +LF LFGVYGDVQRVKILYNKK++ALIQ DG + A+ +LN +YGK +RV SKH ++ +P+ E + L KD+ NS LHRFK+ S+ QNI+PP LHL+ +P S EE+++ LF + T VK QR KMAL+Q+ T++ AI ALI LH+ ++G + LRVSFSK I
Sbjct: 336 GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPR-EGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGT-VKAFKFFQRDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 532 HSP 2 Score: 120.939 bits (302), Expect = 1.368e-28 Identity = 74/218 (33.94%), Postives = 121/218 (55.50%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSG-------SGMHPEAETAVKGANEDVRKLCEGEPKL------VLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + +VTE ++ L +PFG ++ +++ + QA +E+ EE+A MV+YYS PH + I IQ+S ++ L + + +A TAV+ AN + E + VL + I+N + L LH ++F ++G + +II F +N QAL+++ + V A AKL L G N + +RI+FS +L++K+ +D RDYT
Sbjct: 58 SRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLH--QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYT 273
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Match: Ptbp3 (polypyrimidine tract binding protein 3 [Source:MGI Symbol;Acc:MGI:1923334]) HSP 1 Score: 185.652 bits (470), Expect = 8.686e-52 Identity = 97/198 (48.99%), Postives = 130/198 (65.66%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAIT-KVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
NSV++V NLN D I+P LFILFGVYGDV RVKI++NKK AL+Q D A A+ +L+ LYGK +R SKH ++ +P+ E Q L KD+SNS LHRFK+ S+ QNI+PP LHL+ +P S +++KNLF + + K RKMAL+QL +++ AI ALI+LH+ D+G + LRVSFSK I
Sbjct: 261 GNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKKENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPR-EGQEDQGLTKDFSNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMALIQLGSVEEAIQALIELHNHDLGENHHLRVSFSKSTI 457 HSP 2 Score: 85.5001 bits (210), Expect = 3.866e-17 Identity = 55/181 (30.39%), Postives = 91/181 (50.28%), Query Frame = 1
Query: 316 ALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMH---------------PEAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
A +EM EE+A M++YY+ PH + + IQ+S + L + ++ GA + L G+ VL + IEN + L LH ++F ++GT+ +II F +N QAL+++ + V A AK+ L G N + +RI+FS SL++K+ +D RD+T
Sbjct: 2 AFLEMASEEAAVTMINYYTPVTPHLRSQPVYIQYSNHRELKTDNLPNQARAQAALQAVSAVQSGNLSLPGATANEGTLLPGQSP-VLRIIIENLFYPVTLEVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVNAQYAKMALDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDFT 179
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q8WN55|PTBP1_BOVIN (Polypyrimidine tract-binding protein 1 OS=Bos taurus OX=9913 GN=PTBP1 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 1.537e-54 Identity = 101/200 (50.50%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVK+L+NKK AL+Q DG A A+++LN L+GKP+R+ SKH S+ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S E+++K LF + I K RKMAL+Q+ +++ AI ALI LH+ D+G + LRVSFSK I
Sbjct: 333 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKVLFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQSVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 531 HSP 2 Score: 121.709 bits (304), Expect = 6.038e-28 Identity = 81/244 (33.20%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMD 873
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EMH EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D
Sbjct: 58 SRVIHIRKLPGDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMHTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLD 290
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|P26599|PTBP1_HUMAN (Polypyrimidine tract-binding protein 1 OS=Homo sapiens OX=9606 GN=PTBP1 PE=1 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 3.040e-54 Identity = 100/200 (50.00%), Postives = 137/200 (68.50%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + + K RKMAL+Q+ +++ A+ ALI LH+ D+G + LRVSFSK I
Sbjct: 333 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIDLHNHDLGENHHLRVSFSKSTI 531 HSP 2 Score: 118.242 bits (295), Expect = 7.262e-27 Identity = 80/244 (32.79%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMD 873
SRV+HIR + DVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D
Sbjct: 58 SRVIHIRKLPIDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLD 290
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q29099|PTBP1_PIG (Polypyrimidine tract-binding protein 1 OS=Sus scrofa OX=9823 GN=PTBP1 PE=2 SV=1) HSP 1 Score: 194.512 bits (493), Expect = 2.471e-53 Identity = 101/200 (50.50%), Postives = 136/200 (68.00%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVY DVQRVKIL+NKK AL+Q DG A A+++LN L+GKP+R+ SKH ++ +P+ E Q L KDY NS LHRFK+ S+ QNI+PP LHL+ +P S EE++K LF + I K RKMAL+Q+ +++ AI ALI LH+ D+G + LRVSFSK I
Sbjct: 359 GAGNSVLLVSNLNPERVTPQSLFILFGVYCDVQRVKILFNKKENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQNVQLPR-EGQEDQGLTKDYGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDLKILFSSNGGIVKGFKFFQKDRKMALIQMGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 557 HSP 2 Score: 120.168 bits (300), Expect = 2.016e-27 Identity = 75/222 (33.78%), Postives = 120/222 (54.05%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRV+HIR + SDVTE ++ +L +PFG ++ L++ + QA +EM+ EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT
Sbjct: 58 SRVIHIRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVNYYTSVTPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT 276
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q00438|PTBP1_RAT (Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Ptbp1 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.372e-52 Identity = 97/200 (48.50%), Postives = 138/200 (69.00%), Query Frame = 1
Query: 1168 GNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLF-DDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
G NSV++V+NLN +R++P +LFILFGVYGDVQRVKIL+NKK AL++ DG A A+++LN L+GK +R+ SKH S+ +P+ E Q L KDY +S LHRFK+ S+ QNI+PP LHL+ +P S E+++K+LF + + K RKMAL+Q+ +++ A+ ALI+LH+ D+G + LRVSFSK I
Sbjct: 357 GAGNSVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNKKENALVEMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQSVQLPR-EGQEDQGLTKDYGSSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKMALIQMGSVEEAVQALIELHNHDLGENHHLRVSFSKSTI 555 HSP 2 Score: 119.398 bits (298), Expect = 4.703e-27 Identity = 80/244 (32.79%), Postives = 128/244 (52.46%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAET---------AVKGAN--------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMD 873
SRV+H+R + SDVTE ++ +L +PFG ++ L++ + QA +EM EE+A MV+YY+ P G+ I IQFS ++ L + P +V+ N + VL + +EN + L LH ++F ++GT+ +II F +N QAL+++ + V+A AKL L G N + +RI+FS SL++K+ +D RDYT R D +PS +S +D
Sbjct: 57 SRVIHVRKLPSDVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMSTEEAANTMVNYYTSVAPVLRGQPIYIQFSNHKELK-TDSSPNQARAQAALQAVNSVQSGNLALAASAAAVDAGMAMAGQSPVLRIIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLDGQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYT----RPD----LPSGDSQPSLD 289
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Match: sp|Q9UKA9|PTBP2_HUMAN (Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=1) HSP 1 Score: 186.037 bits (471), Expect = 1.516e-50 Identity = 95/197 (48.22%), Postives = 133/197 (67.51%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
N+V++V+NLNE+ ++P +LF LFGVYGDVQRVKILYNKK++ALIQ DG + A+ +LN +YGK +RV SKH ++ +P+ E + L KD+ NS LHRFK+ S+ QNI+PP LHL+ +P S EE+++ LF + T KMAL+Q+ T++ AI ALI LH+ ++G + LRVSFSK I
Sbjct: 336 GNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPR-EGLDDQGLTKDFGNSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKMALLQMATVEEAIQALIDLHNYNLGENHHLRVSFSKSTI 531 HSP 2 Score: 120.168 bits (300), Expect = 1.793e-27 Identity = 74/218 (33.94%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSG-------SGMHPEAETAVKGANEDVRKLCEGEPKL------VLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + +VTE ++ L +PFG ++ +++ + QA +E+ EE+A MV+YYS PH + I IQ+S ++ L + +A TAV+ AN + E + VL + I+N + L LH ++F ++G + +II F +N QAL+++ + V A AKL L G N + +RI+FS +L++K+ +D RDYT
Sbjct: 58 SRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVNYYSAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESAVTPAQSPVLRIIIDNMYYPVTLDVLH--QIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALDGQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYT 273
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A3Q0KMW9 (Polypyrimidine tract binding protein, putative OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 1.056e-109 Identity = 217/572 (37.94%), Postives = 320/572 (55.94%), Query Frame = 1
Query: 175 KRVCVDKI----SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGAN----EDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEF-STRKSLDIKHESDTGRDYTISPVRKDELNS----------------------------IPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSN--ENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
K+ VD++ SRV+HIRN+ D TE +IA AIPFGL+ +VL+++ QAL+EMH E A +V +Y K +GK+++ QFS + L + A+K AN +D+ G P VLHV I+N G ++ H+ YK+F R+GTI R+++F++N + L+EF+N + A VA L L G N + G +++EF R L+++ E+D RDYTISP+ DELNS IP N + A S +D + + +G A A + + N ++ PT ++LN + + + + N + NL N S S Q A++V+IV+NLNE+++ PDALF LFGVYGDV RVKI++NKK+TAL+QF D + A A+ +LN LYGKP+++ S+ + +PK E N V L KDY+NS LHRF++ S+ NIY P VLHL+ +P + EEE++ +F+ Y +T K + + +KMAL+QLE +DMAI ALI LH+C + S LR+SFSK I
Sbjct: 41 KKSRVDRLEASPSRVIHIRNMPGDATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVLEEAVQLVAHYLKYPVTLHGKHLIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQINHVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGCCSLQVEFWKARGPLEVRRENDKCRDYTISPLTDDELNSLQALPGGVTASTNNSTINSISQPSIGQNIPLGNPTAAFTAVPQAAASGINDLAIQLTLLAQQSGLALTPAAAAATASFMALTAQGGNS------AINPTPGTVLNAASLQGPRAALPTVQNQTQLLPNLINQSVSNLGQTGASTVLIVSNLNEEKVYPDALFTLFGVYGDVTRVKIMFNKKSTALVQFSDPQQALTALYHLNGQPLYGKPLKIAVSRFNIVQLPK--EDNDVGLTKDYTNSPLHRFRKPNSKNFTNIYAPNHVLHLSNIPSAITEEEVRMIFETKGYHVTDFKFMMKD-KKMALIQLENVDMAIQALIDLHNCQLTENSHLRISFSKTAI 603
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A183QYD0 (Uncharacterized protein OS=Schistosoma rodhaini OX=6188 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.612e-107 Identity = 215/572 (37.59%), Postives = 316/572 (55.24%), Query Frame = 1
Query: 175 KRVCVDKI----SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGAN----EDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEF-STRKSLDIKHESDTGRDYTISPVRKDELNS----------------------------IPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSN--ENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
K+ VD++ SRV+HIRN+ D TE +IA AIPFGL+ +VL+++ QAL+EMH E A +V +Y K +GK+++ QFS + L + A+K AN +D+ G P VLHV I+N G ++ H+ YK+F R+GTI R+++F++N + L+EF+N + A VA L L G N + G +++EF R L+++ E+D RDYTISP+ DELNS IP N + A S +D + + +G A A + + N ++ PT ++LN + + + + N + NL N S S Q A++V+IV+NLNE+++ PDALF LFGVYGDV RVKI++NKK+TAL+QF D + A A+ +LN LYGKP+++ P+E N V L KDY+NS LHRF++ S+ NIY P VLHL+ +P + EEE++ +F+ Y +T K + + +KMAL+QLE +DMAI ALI LH+C + S LR+SFSK I
Sbjct: 41 KKSRVDRLEASPSRVIHIRNMPGDATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVLEEAVQLVAHYLKYPVTLHGKHLIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQINHVILYKIFHRFGTILRVLIFLRNNQYRCLLEFQNHIQAFVAMLLLNGQNIYTGCCSLQVEFWKARGPLEVRRENDKCRDYTISPLTDDELNSLQALPGGVTASTNNSTINSISQPSIGQNIPLGNPTAAFTAVPQATASGINDLAIQLTLLAQQSGLALTPAAAAATASFMALTAQGGNS------AINPTPGTVLNAASLQGPRAALPTVQNQTQLLPNLINQSVSNLGQTGASTVLIVSNLNEEKVYPDALFTLFGVYGDVTRVKIMFNKKSTALVQFSDPQQALTALYHLNGQPLYGKPLKIAL----------PKEDNDVGLTKDYTNSPLHRFRKPNSKNFTNIYAPNHVLHLSNIPSAITEEEVRMIFETKGYHVTDFKFMMKD-KKMALIQLENVDMAIQALIDLHNCQLTENSHLRISFSKTAI 595
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: A0A4Z2DXT8 (Polypyrimidine tract-binding protein isoform 2 OS=Schistosoma japonicum OX=6182 GN=EWB00_010035 PE=4 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 2.104e-104 Identity = 209/575 (36.35%), Postives = 320/575 (55.65%), Query Frame = 1
Query: 175 KRVCVDKI----SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGAN----EDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEF-STRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAP---------------TLTSLLNQSQMGSMNSRESSRMNYSN------------------ENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
K+ VD++ SRV+HIRN+ +D TE +IA AIPFGL+ +VL+++ QAL+EMH E + +V +Y K +GK+++ QFS + L + A+K AN +D+ G P VLHV I+N G ++ H+ YK+F R+G I R+++F++N + L+EF++ + A VA L L G N + G +++EF R L+++ E+D RDYT+SP+ + ELNS+ + S + N S + P G +++ G T A ++ ND L LA + +L QS ++N ++ +N + N+ N S Q ++V+IV+NLNE+++ PDALF LFGVYGDV RVKI++NKK+TAL+QF D + A A+ LN LYG+P++++ S+ + +PK E V L KDY+NS LHRF++ S+ NIY P VLHL+ +P EEE++ +F+ Y +T K + + +KMAL+QLE +DMAI A+I LH+C + S LR+SFSK I
Sbjct: 9 KKSRVDRLEASPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVLEESVQLVAHYLKYPVTLHGKHLIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQINHVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGCCSLQVEFWKARGPLEVRRENDKCRDYTVSPLTEAELNSLQALPSGVS----ASTNNSTINTIPQPTIGQNISLGNPTTAFTAIPQAS-----ASGINDLAIQLTLLAQQSGLALTPAAAAATASFMALTAQSGNPAINQAPATILNAAALQSPRTALTTVQNPTQLLPNIINQSIPNMGQTATSTVLIVSNLNEEKVYPDALFTLFGVYGDVTRVKIMFNKKSTALVQFSDPQQALTALYYLNGQPLYGRPLKISVSRFNIVQLPK--EDTDVGLTKDYTNSPLHRFRKPNSKNFSNIYAPNHVLHLSNIPSDITEEEVRMIFETKGYHVTDFKFLLKD-KKMALIQLENVDMAIQAMIDLHNCQLTENSHLRISFSKTAI 571
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: C1LLD5 (Polypyrimidine tract-binding protein 1 OS=Schistosoma japonicum OX=6182 PE=2 SV=1) HSP 1 Score: 335.88 bits (860), Expect = 2.900e-104 Identity = 209/575 (36.35%), Postives = 320/575 (55.65%), Query Frame = 1
Query: 175 KRVCVDKI----SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGAN----EDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEF-STRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAP---------------TLTSLLNQSQMGSMNSRESSRMNYSN------------------ENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
K+ VD++ SRV+HIRN+ +D TE +IA AIPFGL+ +VL+++ QAL+EMH E + +V +Y K +GK+++ QFS + L + A+K AN +D+ G P VLHV I+N G ++ H+ YK+F R+G I R+++F++N + L+EF++ + A VA L L G N + G +++EF R L+++ E+D RDYT+SP+ + ELNS+ + S + N S + P G +++ G T A ++ ND L LA + +L QS ++N ++ +N + N+ N S Q ++V+IV+NLNE+++ PDALF LFGVYGDV RVKI++NKK+TAL+QF D + A A+ LN LYG+P++++ S+ + +PK E V L KDY+NS LHRF++ S+ NIY P VLHL+ +P EEE++ +F+ Y +T K + + +KMAL+QLE +DMAI A+I LH+C + S LR+SFSK I
Sbjct: 9 KKSRVDRLEASPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVLEESVQLVAHYLKYPVTLHGKHLIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQINHVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGCCSLQVEFWKARGPLEVRRENDKCRDYTVSPLTEAELNSLQALPSGVT----ASTNNSTINTIPQPTIGQNISLGNPTTAFTAIPQAS-----ASGINDLAIQLTLLAQQSGLALTPAAAAATASFMALTAQSGNPAINQAPATILNAAALQSPRTALTTVQNPTQLLPNIINQSIPNMGQTATSTVLIVSNLNEEKVYPDALFTLFGVYGDVTRVKIMFNKKSTALVQFSDPQQALTALYYLNGQPLYGRPLKISVSRFNIVQLPK--EDTDVGLTKDYTNSPLHRFRKPNSKNFSNIYAPNHVLHLSNIPSDITEEEVRMIFETKGYHVTDFKFLLKD-KKMALIQLENVDMAIQAMIDLHNCQLTENSHLRISFSKTAI 571
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Match: C1LLD8 (Polypyrimidine tract-binding protein 1 OS=Schistosoma japonicum OX=6182 GN=EWB00_010035 PE=2 SV=1) HSP 1 Score: 336.65 bits (862), Expect = 3.490e-104 Identity = 213/593 (35.92%), Postives = 325/593 (54.81%), Query Frame = 1
Query: 121 PQMSKRILDLNENSGSGGKRVCVDKI----SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGAN----EDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEF-STRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLA---------------PTLTSLLNQSQMGSMNSRESSRMNYSN------------------ENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGL-SKLRVSFSKGFI 1761
P M I+D K+ VD++ SRV+HIRN+ +D TE +IA AIPFGL+ +VL+++ QAL+EMH E + +V +Y K +GK+++ QFS + L + A+K AN +D+ G P VLHV I+N G ++ H+ YK+F R+G I R+++F++N + L+EF++ + A VA L L G N + G +++EF R L+++ E+D RDYT+SP+ + ELNS+ + S + N S + P G +++ G T A ++ ND L LA + +L QS ++N ++ +N + N+ N S Q ++V+IV+NLNE+++ PDALF LFGVYGDV RVKI++NKK+TAL+QF D + A A+ LN LYG+P++++ S+ + +PK E V L KDY+NS LHRF++ S+ NIY P VLHL+ +P EEE++ +F+ Y +T K + + +KMAL+QLE +DMAI A+I LH+C + S LR+SFSK I
Sbjct: 31 PSMDLEIVD--------NKKSRVDRLEASPSRVIHIRNMPADATENEIALFAIPFGLLKNMVLSKRNNQALIEMHVLEESVQLVAHYLKYPVTLHGKHLIFQFSTHSHLELISENDAIVNAIKNANRVVQQDLPGAQTGVPNTVLHVVIDNIMGQQINHVILYKIFHRFGIILRVLIFLRNNQYRCLLEFQDHIQAFVAMLLLNGQNIYTGCCSLQVEFWKARGPLEVRRENDKCRDYTVSPLTEAELNSLQALPSGVS----ASTNNSTINTIPQPTIGQNISLGNPTTAFTAIPQAS-----ASGINDLAIQLTLLAQQSGLALTPAAAAATASFMALTAQSGNPAINQAPATILNAAALQSPRTALTTVQNPTQLLPNIINQSIPNMGQTATSTVLIVSNLNEEKVYPDALFTLFGVYGDVTRVKIMFNKKSTALVQFSDPQQALTALYYLNGQPLYGRPLKISVSRFNIVQLPK--EDTDVGLTKDYTNSPLHRFRKPNSKNFSNIYAPNHVLHLSNIPSDITEEEVRMIFETKGYHVTDFKFLLKD-KKMALIQLENVDMAIQAMIDLHNCQLTENSHLRISFSKTAI 603
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 184.496 bits (467), Expect = 9.024e-51 Identity = 93/194 (47.94%), Postives = 132/194 (68.04%), Query Frame = 1
Query: 1183 VVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
V++ +NLN++ ++P +LF LFGVYGDVQRVKILYNKK++ALIQ DG A A+++LN +YGK +RV SKH ++ +P+ E + L KD++NS LHRFK+ S+ QNI+PP LHL+ + + EE+++ LF + T RKMAL+Q+ T++ AI ALI LH+ D+G +LRVSFSK I
Sbjct: 346 VLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPR-EGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFFQDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI 538 HSP 2 Score: 112.464 bits (280), Expect = 6.940e-26 Identity = 68/224 (30.36%), Postives = 115/224 (51.34%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRK------------LCEGEPKLVLHVTIENWEGSRLGHLHFY--------KLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRV+HIR + ++V+E ++ L +PFG ++ +++ + QA +E+ EE+A MV+YY+ P + IQ+S ++ L + AV A V++ + P VL + I+N FY ++F ++GT+ +II F +N QAL++F + V A AKL L G N + +RI+FS +L++K+ +D RDYT
Sbjct: 53 SRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDTAGDSILSPAPSPVLRIIIDNM---------FYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYT 267
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp2b (polypyrimidine tract-binding protein 2-like [Source:NCBI gene;Acc:103030091]) HSP 1 Score: 183.726 bits (465), Expect = 9.479e-51 Identity = 93/194 (47.94%), Postives = 132/194 (68.04%), Query Frame = 1
Query: 1183 VVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
V++ +NLN++ ++P +LF LFGVYGDVQRVKILYNKK++ALIQ DG A A+++LN +YGK +RV SKH ++ +P+ E + L KD++NS LHRFK+ S+ QNI+PP LHL+ + + EE+++ LF + T RKMAL+Q+ T++ AI ALI LH+ D+G +LRVSFSK I
Sbjct: 326 VLLASNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMADGNQAQLAMSHLNGQKMYGKIIRVTLSKHQTVQLPR-EGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPSATLHLSNVRDDVTEEDLRLLFSNSGGTVKAFKFFQDRKMALLQMSTVEEAIQALIDLHNYDMGRGHRLRVSFSKSTI 518 HSP 2 Score: 112.849 bits (281), Expect = 5.687e-26 Identity = 68/224 (30.36%), Postives = 115/224 (51.34%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRK------------LCEGEPKLVLHVTIENWEGSRLGHLHFY--------KLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRV+HIR + ++V+E ++ L +PFG ++ +++ + QA +E+ EE+A MV+YY+ P + IQ+S ++ L + AV A V++ + P VL + I+N FY ++F ++GT+ +II F +N QAL++F + V A AKL L G N + +RI+FS +L++K+ +D RDYT
Sbjct: 53 SRVIHIRKLPNEVSETEVIALGLPFGKVTNILMLKGKNQAFLELGTEEAAVTMVNYYTAVTPQVRNVPVFIQYSNHKELKTDSALNQRAQAVLQAVSAVQEGGSPSSDTAGDSILSPAPSPVLRIIIDNM---------FYPVTLDVLQQIFSKFGTVMKIITFTKNNQFQALLQFSDPVNAQQAKLSLDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYT 267
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp3 (polypyrimidine tract binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-091116-1]) HSP 1 Score: 183.341 bits (464), Expect = 1.266e-50 Identity = 97/198 (48.99%), Postives = 132/198 (66.67%), Query Frame = 1
Query: 1177 NSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SV++V+NLN D ISP +LFILFGVYGDV RVKIL+NKK AL+Q D A A+++LN L+G+ +RV SKH ++ +P+ E Q L KD+S S LHRFK+ S+ QNI+PP LHL+ +P S ++ +K+LF Y + K RKMAL+QL +++ AI ALI LH+ D+G + LRVSFSK I
Sbjct: 311 HSVLLVSNLNPDSISPHSLFILFGVYGDVHRVKILFNKKENALVQMADATQAQLAMSHLNGQRLHGRVIRVTISKHQTVQLPR-EGQEDQGLTKDFSGSPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSIADDMLKDLFSSAGYTVKAFKFFQ-KDRKMALIQLGSVEEAIQALIDLHNHDLGENHHLRVSFSKSTI 506 HSP 2 Score: 75.485 bits (184), Expect = 6.075e-14 Identity = 65/235 (27.66%), Postives = 107/235 (45.53%), Query Frame = 1
Query: 172 GKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYK--LFQRYGTICRIIV-------------FVQNQSPQALIEFENE----VAAHVAKL---QLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
G R C SRV+H+R V +V+E ++ +L IPFG ++ L++ + QA +EM EE+A MV+YY+ PH + + IQ+S + L + N+ VR P + + + + + FY+ +Y C IIV +V + + N +A H+ +L L G N + +RIEFS SL++K+ +D RD+T
Sbjct: 16 GDRSC--GPSRVVHVRKVPIEVSEAEVISLGIPFGKVTNLLMLKAKNQAFIEMASEEAAITMVNYYTTATPHVRNQPVYIQYSNHRELKTDNL----------PNQGVR-----SPSTLSVLPVLDQCAA-----FFYRQAASPKYIRTCGIIVTHKYYKCCSFLYLYVGLFGSNYITKTNNSNNKFMAVHLLRLTPITLDGQNIYNACCTLRIEFSKLTSLNVKYNNDKSRDFT 228
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp1b (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:103035814]) HSP 1 Score: 182.57 bits (462), Expect = 2.314e-50 Identity = 93/198 (46.97%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDY-AITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+ V++V+NLN +R++P LFILFGVYGDV RVKI++NKK AL+Q DG A A+++LN LYG+ +R+ SKHT++ +P+ E L KDYSNS LHRFK+ S+ NI+PP + LHL+ +P S E+++K LF A+ K RKMAL+Q+ +++ AI++LI+ H+ D+G + LRVSFSK I
Sbjct: 303 GHCVMLVSNLNPERVTPQCLFILFGVYGDVIRVKIMFNKKENALVQMSDGTQAQLAMSHLNGQKLYGRALRITLSKHTTVQLPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKMLFSTSGALVKNFKFFQKDRKMALIQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI 499 HSP 2 Score: 122.094 bits (305), Expect = 4.195e-29 Identity = 80/243 (32.92%), Postives = 128/243 (52.67%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKGAN---------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNA 888
SRV+H+R + SD+ E ++ +L +PFG ++ L++ + QA +EM+ EE+AQ MV YYS P I +Q+S ++ L S A+ A++ N V P VL V +EN + L LH ++F ++GT+ ++I F +N QAL++F + + A AKL L G N + +RI FS SL++K+ +D RDYT R D +P+ +S ++ H A
Sbjct: 30 SRVIHVRKLPSDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMAIAGVDPSGVTGPSPVLRVIVENLFYPVTLDVLH--QIFSKFGTVLKVITFTKNNQFQALLQFADGLTAQHAKLALDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYT----RPD----LPTGDSQPAIEHHAMA 262
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Match: ptbp1b (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:103035814]) HSP 1 Score: 182.185 bits (461), Expect = 6.477e-50 Identity = 93/198 (46.97%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDY-AITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+ V++V+NLN +R++P LFILFGVYGDV RVKI++NKK AL+Q DG A A+++LN LYG+ +R+ SKHT++ +P+ E L KDYSNS LHRFK+ S+ NI+PP + LHL+ +P S E+++K LF A+ K RKMAL+Q+ +++ AI++LI+ H+ D+G + LRVSFSK I
Sbjct: 359 GHCVMLVSNLNPERVTPQCLFILFGVYGDVIRVKIMFNKKENALVQMSDGTQAQLAMSHLNGQKLYGRALRITLSKHTTVQLPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSSTLHLSNIPPSVVEDDLKMLFSTSGALVKNFKFFQKDRKMALIQMGSVEEAIESLIEFHNHDLGENHHLRVSFSKSTI 555 HSP 2 Score: 120.939 bits (302), Expect = 1.252e-28 Identity = 80/243 (32.92%), Postives = 128/243 (52.67%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKGAN---------EDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNA 888
SRV+H+R + SD+ E ++ +L +PFG ++ L++ + QA +EM+ EE+AQ MV YYS P I +Q+S ++ L S A+ A++ N V P VL V +EN + L LH ++F ++GT+ ++I F +N QAL++F + + A AKL L G N + +RI FS SL++K+ +D RDYT R D +P+ +S ++ H A
Sbjct: 59 SRVIHVRKLPSDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEMNTEEAAQTMVSYYSSVTPVIRNHPIFMQYSNHKELKTDNSPNQVRAQAALQAVNAVQTGSMAIAGVDPSGVTGPSPVLRVIVENLFYPVTLDVLH--QIFSKFGTVLKVITFTKNNQFQALLQFADGLTAQHAKLALDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYT----RPD----LPTGDSQPAIEHHAMA 291
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008413.1 (pep scaffold:Pmarinus_7.0:GL478562:177533:180128:-1 gene:ENSPMAG00000007617.1 transcript:ENSPMAT00000008413.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 99.3673 bits (246), Expect = 1.170e-24 Identity = 53/140 (37.86%), Postives = 87/140 (62.14%), Query Frame = 1
Query: 1348 NLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFD-DYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
+LN +YGKP+RV S++ ++ +P+ S L D+S+S LHRF+R ++ +I+PP LHL+ +P S E+++K LF+ + + K KMALVQ+E+++ AI L +LH+ ++ ++ LRVSFSK I
Sbjct: 24 HLNGQRMYGKPIRVTSSRYQTVQLPR---DGSDSLTCDFSDSPLHRFRRMGAKNFHHIFPPSVTLHLSNIPSSVLEDDLKTLFESNGCVVKALKFFATDHKMALVQMESLEEAIQTLAELHNHELEKNRLLRVSFSKSVI 160
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006507.1 (pep scaffold:Pmarinus_7.0:GL480554:3468:10153:1 gene:ENSPMAG00000005883.1 transcript:ENSPMAT00000006507.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 99.7525 bits (247), Expect = 1.006e-23 Identity = 71/218 (32.57%), Postives = 119/218 (54.59%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL-----------SGSGMHPEAETAVKGAN-EDVRKLCEGEPK-LVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
S+VLHIR + + TE ++ LA+PFG ++ +++ + QA +EM EE+A A V +YS P + + +Q+S Y++L S + +A+ A+ AN D + P+ +LH+ +EN L LH +F +YGT+ +II+F +N QAL++F + AH AK L G N + G +R+ FS +L++K+ ++ RD T
Sbjct: 26 SKVLHIRKLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQPVYVQYSTYKSLKTDNSAYQAARSHARREQKAQAAMMVANGSDSEETNSAAPQSPILHIIVENLLYPITLEVLH--HVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAKTMLDGQNIYNGCCTLRVGFSRLTNLNVKYNNEKSRDLT 241
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: HNRNPLL (heterogeneous nuclear ribonucleoprotein L like [Source:HGNC Symbol;Acc:HGNC:25127]) HSP 1 Score: 97.0561 bits (240), Expect = 8.645e-22 Identity = 114/487 (23.41%), Postives = 197/487 (40.45%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGR-PVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSM-NSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKP-EEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKM 1650
S V+HIR ++S E + FG + ++V+ QAL+E E A+A V + + G+ FS + +S G P +DV + +L +T+ N + + + YG + RI++F +N QAL F++ +A AK L G++ + G ++IE++ + P R + N S+ DY + +G + NGQ AL P + N T P S N + N+R ++ M+ + + AN V++V N+N ++ LF L +YG+V+++K L +K +IQ D RAV NLN L+G+ + ++ SK I + E ++ +D+ SR +RF + I PP +LH P + E+ + ++ + K PN K+
Sbjct: 11 SPVVHIRGLASSADESQVMEALQEFGTVRHVVMMPHRRQALVEFERLEDARACVAGTAGDPVYVGGQPAYCNFSTSQRISRKGGTPA---------DDVART-----NHILLLTVNNALYPITTEV-IHTICSPYGVVQRIVIFKKNGV-QALRTFDSIPSAQQAKSSLNGADIYSGCCTLKIEYAKERK----------------PARLNVYR-----------------NDSETWDY--TLEGPCVPNGQQKKQPALLGDHPSTMRGYGNQQGTY------CPQNYSFNNYTSGSPFGNARPTTPMSGPGTCAPHNNPCPMGGSAANRVMMVYNMNPSVMNCSRLFNLVCLYGNVEKIKFLKSKPGVGMIQMADAASVDRAVANLNTAQLFGQKLSLSVSKQQEIVAGQAFELEDGSDSFRDFVGSRHNRFSTHEQASKNRILPPSAILHFYSAPPEFSEQAFIQICEETGVKK-----PNAFKL 435
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006509.1 (pep scaffold:Pmarinus_7.0:GL480554:3489:6552:1 gene:ENSPMAG00000005883.1 transcript:ENSPMAT00000006509.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 83.1889 bits (204), Expect = 1.728e-18 Identity = 59/180 (32.78%), Postives = 98/180 (54.44%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL-----------SGSGMHPEAETAVKGAN-EDVRKLCEGEPK-LVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAK 696
S+VLHIR + + TE ++ LA+PFG ++ +++ + QA +EM EE+A A V +YS P + + +Q+S Y++L S + +A+ A+ AN D + P+ +LH+ +EN L LH +F +YGT+ +II+F +N QAL++F + AH AK
Sbjct: 19 SKVLHIRKLPENATEAEVVTLALPFGRVTNILMLKGKSQAFLEMASEEAAVAAVTFYSTDPPVLRNQPVYVQYSTYKSLKTDNSAYQAARSHARREQKAQAAMMVANGSDSEETNSAAPQSPILHIIVENLLYPITLEVLH--HVFSKYGTVLKIIIFNKNSQYQALMQFADASNAHQAK 196
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Match: HNRNPLL (heterogeneous nuclear ribonucleoprotein L like [Source:HGNC Symbol;Acc:HGNC:25127]) HSP 1 Score: 74.7146 bits (182), Expect = 2.171e-14 Identity = 47/152 (30.92%), Postives = 77/152 (50.66%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSI----SMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITK 1617
N V++V + +RI+ D +F + ++G+V++VK L +K A+++ D RAV++LN ++GK + + SK SI + P+ NS KD++ SR +RF A I P TVLH P E L D+ +I +
Sbjct: 313 GNKVLMVYGFDAERINCDRVFNILCLFGNVEKVKFLKSKPGAAMVEMGDPYAVDRAVSHLNMSQIFGKKINLCVSKQQSIVPGQAYELPDGTNSY---KDFTGSRNNRFANAEKAAKNRIQQPTTVLHFFNAPMDITAEIFMQLCDEMSIAR 461 HSP 2 Score: 59.3066 bits (142), Expect = 1.278e-9 Identity = 63/234 (26.92%), Postives = 109/234 (46.58%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDI-KHESDTGRDYTISPVRKDEL-NSIPSFNSSYGMDDHGNAN 891
S V+H+R +S E D+ FG ISY+V+ K QAL+E ES+++ V+Y S + G+ FS + +S G ED R +L TI N + Y + G + RI++F +N QA+ F++ +A AK L G++ + G +++E++ L++ K++S+T DYT ++ + N++ + + DH AN
Sbjct: 48 SAVVHVRGLSDAALESDLVEAVQHFGPISYVVMMPKKRQALVEFEDLESSRSCVNYSSTGSIYVCGQPAYFNFSTSQKISRP-----------GGPEDNR-----NSNHILLFTILNPIYPITTDV-LYTICNPCGPVQRIVIFRKN-GLQAMATFDSVQSAQRAKSSLNGADIYSGCCTLKVEYAKPTRLNVFKNDSET-WDYTNPGLKAGQAENAMMPAKQTALLGDHPKAN 262
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Yeast
Match: MSL1 (U2B component of U2 snRNP; involved in splicing, binds the U2 snRNA stem-loop IV in vitro but requires association of Lea1p for in vivo binding; does not contain the conserved C-terminal RNA binding domain found in other family members [Source:SGD;Acc:S000001448]) HSP 1 Score: 43.5134 bits (101), Expect = 6.648e-6 Identity = 27/81 (33.33%), Postives = 45/81 (55.56%), Query Frame = 1
Query: 1174 ANSVVIVANLNE----DRISPDALFILFGVYGDVQRVKILYNK-KNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSK 1401
A + + V+ LNE R+ + LF+LF +G+V +V + + K + A I + A+ A +LN +GKP++V FSK
Sbjct: 26 AKNTLYVSQLNEKINMQRLRVN-LFLLFATFGEVLKVSMNFKKQRGQAFITMRTIDQASLAQISLNGERFFGKPLKVEFSK 105
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO43995 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RXA3]) HSP 1 Score: 192.971 bits (489), Expect = 5.866e-55 Identity = 98/191 (51.31%), Postives = 132/191 (69.11%), Query Frame = 1
Query: 1183 VVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSK 1752
+V+V+NLNE+ IS DALF LFG YGDVQRVKIL+NKK+TAL+QF + A A+ +LN V ++GK M+V SKHTS+S+PK E +L KDY NS LHRFK+ S+ QNI+PP LHL+ +PES EEE+ ++F+D P RKMA + + T + AIDALIK+H+ + + LRVSF++
Sbjct: 279 LVLVSNLNEEMISCDALFTLFGCYGDVQRVKILFNKKDTALVQFANVHQAQTAIGHLNGVRVFGKEMKVTNSKHTSVSLPK--EGEDTNLTKDYMNSPLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSMFEDCGDVADFRFLPKDRKMAHLSMATTEEAIDALIKMHNYKISETHHLRVSFAR 467 HSP 2 Score: 110.153 bits (274), Expect = 9.642e-26 Identity = 69/233 (29.61%), Postives = 124/233 (53.22%), Query Frame = 1
Query: 196 ISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANED-----VRKLCEG------EPKL---VLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPS 849
+S+VLH+RNV+++ T+ +I L IP+G ++ +++ + QA +EM +E+A A+++ YS P G+ I IQ+S ++ L+ + + V+G + + L G P + +L + +EN + ++F +YGT+ +I++F +N QAL++F A AK L G N + G +RI++S K+L +K+ +D RDYT + E PS
Sbjct: 1 MSKVLHLRNVAAEATDAEIIALGIPYGRVTNVLMLKGKNQAFLEMKTKENAMALMNSYSYIPPSIRGRQIYIQYSNHQELTTN--ESQHSPGVRGLSSSHLGAGIGSLTSGLGIAGELPSVNGCILRIIVENMLYPITIEV-LNQIFTKYGTVLKIVIFTRNNQFQALVQFSQSTEARAAKCSLDGQNIYNGCCTLRIDYSKLKTLSVKYNNDKTRDYTRPDLPSGESTPDPS 230
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO26232 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7TCJ0]) HSP 1 Score: 123.25 bits (308), Expect = 3.982e-33 Identity = 64/139 (46.04%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 1339 AVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSK 1752
A+ +LN V ++GK M+V SKHTS+S+PK E +L KDY NS LHRFK+ S+ QNI+PP LHL+ +PES EEE+ ++F+D P RKMA + + T + AIDALIK+H+ + + LRVSF++
Sbjct: 1 AIGHLNGVRVFGKEMKVTNSKHTSVSLPK--EGEDTNLTKDYMNSPLHRFKKPGSKNFQNIFPPSRTLHLSNIPESVTEEELTSMFEDCGDVADFRFLPKDRKMAHLSMATTEEAIDALIKMHNYKISETHHLRVSFAR 137
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO39119 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAW4]) HSP 1 Score: 77.7962 bits (190), Expect = 3.567e-15 Identity = 53/213 (24.88%), Postives = 104/213 (48.83%), Query Frame = 1
Query: 1171 NANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPK--PEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAIT---KVKMINPN---QRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFIAN*VELAF 1785
+ +V++V L++D+++ D LF L YG+V ++K L K TA+ + + + NL+ + L+ + + +FSK + P P + K + NS+ +RF AT+ + ++ P VLH P EE+I+ + + +KM +P+ + L++ E++ A++AL+ + + S + F+ V+LAF
Sbjct: 301 SGGNVIMVYGLDKDKMNCDRLFNLLCCYGNVIKIKFLLGKPGTAMAELHEHVACNTVMENLSKMTLFDQQLEFSFSKQDYLVEPANVPNLPDGSPSFKSFDNSKNNRFTSATASSKNRVFTPMKVLHFFNAPVDCTEEQIREMCQVCGVAPPKTIKMFSPSGNARTSSGLIEWESVTQALEALVMCNHYVIRNSTAKTIFT-------VKLAF 506 HSP 2 Score: 52.373 bits (124), Expect = 3.716e-7 Identity = 57/235 (24.26%), Postives = 104/235 (44.26%), Query Frame = 1
Query: 121 PQMSKRILDLNENSGSGGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPH-FYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIE---FENEVAAHVAKLQLGGSNAFYG-RPVRIEFST-RKSLDIKHESDTGRDYT 807
P R+ + N+ GG + SRV+H+R V+ + E+D+ +G IS + + K QAL+E A +V+ P G+ +S+ + +S +H +ET +P +L +TI N + + + +F + G + RI++F + QA++E F+ AA AK L G++ + G ++IE + L+++ DYT
Sbjct: 21 PTKRARVDSSDSNNRYGGGDPHFAEPSRVVHVRGVADEAREQDLMQCLSQYGNISCITMMPKIRQALVEFEEIACANTLVNQTQMGNPVILCGRPAYANYSKSKQIS-RNVHVRSET---------------QPNKILLITIINPQYVVTTDI-LHTIFSKQGMVQRIVIF-RKSGLQAMVEESRFDCVEAARHAKETLNGADIYTGCNTLKIESQGYAQQLNVRKNDSETYDYT 237
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO35537 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLA1]) HSP 1 Score: 61.6178 bits (148), Expect = 5.918e-11 Identity = 57/205 (27.80%), Postives = 90/205 (43.90%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTR-KSLDIKHESDTGRDYT 807
SRV+H R V+ E D+ + PFG I+Y+ L K QAL+E ESA A+V Y G+ + + +S+ + + K N D C ++L I + LH K+ G + RI++F +N QAL +A A L G + + G ++I++S + K L++ D DYT
Sbjct: 6 SRVIHCRAVADGCKETDLIQVLQPFGTITYVTLLPKIRQALVEFESLESAIAVVTYSQTSPLTVLGRQMFVNYSKSQEIKRD----------KVLNGDSNGACAEASNILLLTIINPLHPINVKILH--KICSPSGKVLRIVIFHKN-GLQAL-------SAERALAVLNGQDIYAGCCTLKIDYSKKAKKLNVFKNDDETWDYT 190
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Match: EDO35536 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SLA0]) HSP 1 Score: 56.225 bits (134), Expect = 4.731e-9 Identity = 43/190 (22.63%), Postives = 91/190 (47.89%), Query Frame = 1
Query: 1183 VVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKH-----TSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIY---PPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINP----------NQRKMALVQLETIDMAIDALI 1698
+++V LN ++++ + +F LF +YG+V +VK L NK ++Q D + + NL+ ++ + + FSKH +S+ P+ S +++++R +RFK + ++ PP +LH P + ++++++ TK + P + L+++ I A++ALI
Sbjct: 1 MLMVYGLNHEKMNCERIFNLFCLYGNVIKVKFLTNKPGACMVQMSDKIASEMIIRNLSGATIFDNKINIMFSKHPFIADSSVVTALPDSSPSAM---NFADNRNNRFKYDNMPFLDSVVGYQPPTRMLHFFNAPPNCTVDQLRDV-----STKAGALAPLKGTFFSKANTKSSAGLLEMPDIRSAMEALI 182
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ptbp1 (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:101165926]) HSP 1 Score: 256.914 bits (655), Expect = 2.277e-77 Identity = 185/559 (33.09%), Postives = 281/559 (50.27%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYE---------------------TLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKD--ELNSIPSFN------SSYGMDDHGNANYSQHHDYPVS---RQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSL-LNQSQM-GSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAIT-KVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
SRV+H+R + +D+ E ++ +L +PFG ++ L++ + QA +E EE AQ MV YYS P I +Q+S ++ L GSGM A+ + P VL V +EN + L LH ++F ++GT+ +II F +N QALI++ + + A AKL L G N + +RI FS SL++K+ +D RDYT R D +S PS + +++G + Y H +P + +Q G L M Q + L SL + S M + + ++R+ S + G N +++ +NLN + ++P LFILFGVYGDV RVKIL+NKK AL+Q DG A ++++LN L+G+ +RV SKHT++ +P+ E L KDYSNS LHRFK+ S+ NI+PP LHL+ +P S E++++ LF T K RKMAL+Q+ +++ AI+ LI+ H+ D+G + LRVSFSK I
Sbjct: 72 SRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEFGSEECAQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGSGM---GSMAISAEAASMGGAASQSP--VLRVIVENLFYPVTLDVLH--QIFSKFGTVLKIITFTKNNQFQALIQYADAMTAQHAKLSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYT----RPDLPTADSQPSLDHQAMAAAAFGPGIISASPYGGAHAFPPTFTFQQAG------------------------------LSM-QGIPSALASLGVGHSGMAAAAAAAAATRLGLSGLG---------ATGGHNVLLV-SNLNPESVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLSMSHLNGQRLHGRAIRVTLSKHTTVQLPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLRRLFASTGATVKAFKFFQKDRKMALIQMGSVEEAIECLIEFHNHDLGENHHLRVSFSKSTI 577
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ptbp1 (polypyrimidine tract binding protein 1 [Source:NCBI gene;Acc:101165926]) HSP 1 Score: 221.476 bits (563), Expect = 4.996e-64 Identity = 175/569 (30.76%), Postives = 267/569 (46.92%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYE---------------------TLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYK----------LFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYTISPVRKD--ELNSIPSFN------SSYGMDDHGNANYSQHHDYPVS---RQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSL-LNQSQM-GSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAIT-KVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
SRV+H+R + +D+ E ++ +L +PFG ++ L++ + QA +E EE AQ MV YYS P I +Q+S ++ L GSGM A+ + P VL V +EN + L LH + L T C+ + + + S L+ A H L G N + +RI FS SL++K+ +D RDYT R D +S PS + +++G + Y H +P + +Q G +Q + L SL + S M + + ++R+ S + G N +++ +NLN + ++P LFILFGVYGDV RVKIL+NKK AL+Q DG A ++++LN L+G+ +RV SKHT++ +P+ E L KDYSNS LHRFK+ S+ NI+PP LHL+ +P S E++++ LF T K RKMAL+Q+ +++ AI+ LI+ H+ D+G + LRVSFSK I
Sbjct: 64 SRVVHVRKLPNDINEAEVISLGLPFGKVTNLLMLKGKNQAFLEFGSEECAQTMVSYYSSVTPVIRNHPIYMQYSTHKELKTDNSPNQVRAQAALQAVNALHGSGM---GSMAISAEAASMGGAASQSP--VLRVIVENLFYPVTLDVLHQFSPINTCLLLPDLLGFQKTNCQFAIMLPSLSIPFLVS-----AFHALFTSLDGQNIYNACCTLRISFSKLTSLNVKYNNDKSRDYT----RPDLPTADSQPSLDHQAMAAAAFGPGIISASPYGGAHAFPPTFTFQQAGL-------------------------------SMQGIPSALASLGVGHSGMAAAAAAAAATRLGLSGLG---------ATGGHNVLLV-SNLNPESVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDGTQAQLSMSHLNGQRLHGRAIRVTLSKHTTVQLPR-EGHEDQGLTKDYSNSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVMEDDLRRLFASTGATVKAFKFFQKDRKMALIQMGSVEEAIECLIEFHNHDLGENHHLRVSFSKSTI 576
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000042697.1 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 184.882 bits (468), Expect = 2.924e-51 Identity = 95/198 (47.98%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDY-AITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SVV+V+NLN +R++P LFILFGVYGDV RVKIL+NKK AL+Q D A A+++LN L+G+P+R+ SKHTS+ +P+ E L KDYS+S LHRFK+ S+ NI+PP LHL+ +P S E+++K LF A+ K KMAL+Q+ +++ AI+ LI+LH+ D+G + LRVSFSK I
Sbjct: 313 GHSVVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPR-EGHEDQGLTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSFSKSSI 509 HSP 2 Score: 124.79 bits (312), Expect = 5.142e-30 Identity = 75/210 (35.71%), Postives = 120/210 (57.14%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKG---ANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + D+TE ++ +L +PFG ++ L++ + QA +EM+ EE+AQ MV YYS +P + + +QFS ++ L S A+ A++ ++ D L P VL V +EN L L ++F ++GT+ RIIVF +N QAL+++ +A AK+ L G N + G +RI FS +L++K+ +D RD+T
Sbjct: 24 SRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKELKTDNSPNQERAQAALRALSSSHVDTAALVVA-PSSVLRVVVENLLYPVSLDAL--CQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTTLNVKYNNDKSRDFT 230
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: ENSORLT00000036879.1 (polypyrimidine tract-binding protein 1 [Source:NCBI gene;Acc:101170752]) HSP 1 Score: 185.267 bits (469), Expect = 5.964e-51 Identity = 95/198 (47.98%), Postives = 133/198 (67.17%), Query Frame = 1
Query: 1174 ANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDY-AITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLS-KLRVSFSKGFI 1761
+SVV+V+NLN +R++P LFILFGVYGDV RVKIL+NKK AL+Q D A A+++LN L+G+P+R+ SKHTS+ +P+ E L KDYS+S LHRFK+ S+ NI+PP LHL+ +P S E+++K LF A+ K KMAL+Q+ +++ AI+ LI+LH+ D+G + LRVSFSK I
Sbjct: 366 GHSVVLVSNLNAERVTPHCLFILFGVYGDVMRVKILFNKKENALVQMSDSTQAQLAMSHLNGQRLHGRPLRITLSKHTSVQLPR-EGHEDQGLTKDYSSSPLHRFKKPGSKNYSNIFPPSATLHLSNIPPSVVEDDLKMLFSSSGAVVKAFKFFQKDHKMALIQMGSVEEAIECLIQLHNHDLGENHHLRVSFSKSSI 562 HSP 2 Score: 124.02 bits (310), Expect = 1.289e-29 Identity = 73/209 (34.93%), Postives = 119/209 (56.94%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLS--GSGMHPEAETAVKG---ANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
SRVLHIR + D+TE ++ +L +PFG ++ L++ + QA +EM+ EE+AQ MV YYS +P + + +QFS ++ L S A+ A++ ++ D L P VL V +EN + ++F ++GT+ RIIVF +N QAL+++ +A AK+ L G N + G +RI FS +L++K+ +D RD+T
Sbjct: 77 SRVLHIRKLPIDITETEVISLGLPFGDVTNLLMLKAKNQAFLEMNSEEAAQNMVGYYSTVMPIIRQQPVFVQFSNHKELKTDNSPNQERAQAALRALSSSHVDTAALVVA-PSSVLRVVVENLL-YPVSLDALCQIFSKFGTVLRIIVFTKNNQFQALLQYAEGASAQAAKVSLDGQNIYNGCCTLRISFSKLTTLNVKYNNDKSRDFT 283
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Match: PTBP2 (polypyrimidine tract binding protein 2 [Source:NCBI gene;Acc:101156726]) HSP 1 Score: 183.341 bits (464), Expect = 1.230e-50 Identity = 93/200 (46.50%), Postives = 135/200 (67.50%), Query Frame = 1
Query: 1165 QGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSK-LRVSFSKGFI 1761
Q + V++ +NLNE+ ++P +LF LFGVYGDVQRVKILYNKK++ALIQ D A A+++LN +YGK +RV SKH S+++P+ + + L KD++NS LHRFK+ S+ QNI+PP LHL+ + + EE+++ LF + T RKMAL+Q+ T++ AI ALI LH+ ++G ++ LRVSFSK I
Sbjct: 317 QAGSGGVLLASNLNEEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALIQMCDPSQAQLAMSHLNGQKMYGKIIRVTLSKHQSVALPR-DGLDDQGLTKDFTNSSLHRFKKPGSKNFQNIFPPSATLHLSNVLQDVTEEDLRLLFSNTGGTVKAFKFFQDRKMALIQMSTVEEAIQALIDLHNYNMGANQHLRVSFSKSTI 515 HSP 2 Score: 117.087 bits (292), Expect = 1.929e-27 Identity = 70/227 (30.84%), Postives = 125/227 (55.07%), Query Frame = 1
Query: 157 NSGSGGKRVCVDKI--SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHP------EAETAVKGANEDVRKLCEGEPKLVLHVTIEN-WEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKSLDIKHESDTGRDYT 807
++GS K++ V++ SRV+HIR + ++ + ++ L +PFG ++ ++ R QA +EM EE+A MV+YY+ PH + +QFS ++ L +A +AV+ +V+ + VL + I+N + L L ++F ++GT+ +II F +N QAL+++ + V A AKL L G N + +RI+FS +L++K+ +D RDY+
Sbjct: 36 STGSDSKKLRVEEALPSRVIHIRRLPTEAMDAEVIALGLPFGKVTNILTLRGKNQAFLEMGTEEAAITMVNYYNTVPPHVRNSPVYVQFSNHKELKTDAASQRTQAVLQAVSAVQPPGSEVQDVLAAASSPVLRIIIDNMFYPVTLDVLQ--QIFSKFGTVMKIITFTKNNQFQALLQYSDPVQAQHAKLALDGQNIYNSCCTLRIDFSKLVNLNVKYNNDKSRDYS 260
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000022463.1 (SMESG000022463.1) HSP 1 Score: 1103.58 bits (2853), Expect = 0.000e+0 Identity = 547/547 (100.00%), Postives = 547/547 (100.00%), Query Frame = 1
Query: 127 MSKRILDLNENSGSGGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGRPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFIAN 1767
MSKRILDLNENSGSGGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGRPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTAAEALAMLQPLLQQASNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFIAN
Sbjct: 1 MSKRILDLNENSGSGGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGRPVRIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTAAEALAMLQPLLQQASNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFIAN 547
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000019377.1 (SMESG000019377.1) HSP 1 Score: 385.185 bits (988), Expect = 2.744e-127 Identity = 225/531 (42.37%), Postives = 320/531 (60.26%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL--SGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGRPV-RIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKP-----EEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFI 1761
S+VLH+R++ DVTE +IA++A PFG ISY+VLTRKTGQAL+EM +E A+ M +YY + PH K IQ+S + TL + S MHPEAE AV N+ + + + VL + +++W ++ +LH +K+FQ YG + RI+++V Q I++ +A VAK G F V R+ FS R+SLDI E D RD+ PV EL +I N G+ + + R+ + + T A +L + +P+D +P+L+S+AP + L+ + RE SR + N+N T K+ + ++IV+NLNE +I PDALF LFG YGDV RVKI+YN+KNTALIQF EHA RA+ LN VNLYGKP+ VNFSKH IS P EE L+++Y++S+LHRFKRA SR NIY P VLH+AGL + EE+I+ LF D + + K+++ N + +KMALV+L +++ AI+ALI+LHD D+ S LRVSFSK ++
Sbjct: 29 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNI-HVNIGGGIP-------KETERFRDIREFRELRDPIDTLAALQPLLTHA----ATHPDDAMPLLRSIAPAIRGFLDSQDLLP---REISRHD-RNDNFGRTHFGEKT----SPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATEEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYL 539
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000019377.1 (SMESG000019377.1) HSP 1 Score: 385.185 bits (988), Expect = 3.151e-127 Identity = 225/531 (42.37%), Postives = 320/531 (60.26%), Query Frame = 1
Query: 199 SRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETL--SGSGMHPEAETAVKGANEDVRKLCEGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYGRPV-RIEFSTRKSLDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNYSNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKP-----EEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNLFDD--YAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVGLSKLRVSFSKGFI 1761
S+VLH+R++ DVTE +IA++A PFG ISY+VLTRKTGQAL+EM +E A+ M +YY + PH K IQ+S + TL + S MHPEAE AV N+ + + + VL + +++W ++ +LH +K+FQ YG + RI+++V Q I++ +A VAK G F V R+ FS R+SLDI E D RD+ PV EL +I N G+ + + R+ + + T A +L + +P+D +P+L+S+AP + L+ + RE SR + N+N T K+ + ++IV+NLNE +I PDALF LFG YGDV RVKI+YN+KNTALIQF EHA RA+ LN VNLYGKP+ VNFSKH IS P EE L+++Y++S+LHRFKRA SR NIY P VLH+AGL + EE+I+ LF D + + K+++ N + +KMALV+L +++ AI+ALI+LHD D+ S LRVSFSK ++
Sbjct: 30 SKVLHVRSLPDDVTEMEIASIATPFGHISYMVLTRKTGQALLEMETKEIAETMFEYYQRHSPHLRNKRCFIQYSHHGTLQSTDSSMHPEAENAVSTTNQICDSMAKEQAGPVLRLVVDDWNHEKITNLHLFKIFQHYGILERIVIYVSKGIVQGFIQYSEPFSAKVAKALTNGLCVFPRCCVLRVNFSNRQSLDISREDDLVRDFVRHPVSPQELKNI-HVNIGGGIP-------KETERFRDIREFRELRDPIDTLAALQPLLTHA----ATHPDDAMPLLRSIAPAIRGFLDSQDLLP---REISRHD-RNDNFGRTHFGEKT----SPLLIVSNLNEAKIHPDALFKLFGCYGDVTRVKIMYNRKNTALIQFATEEHAQRALQFLNGVNLYGKPLHVNFSKHDRISHRAPIAGSEEEATGDLLHREYNDSKLHRFKRAQSRNHSNIYEPSKVLHVAGLIDDVSEEDIEALFTDNKFRVKKIRVFNSSGKKMALVELSSVESAIEALIELHDYDLCGSNLRVSFSKQYL 540
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000018057.1 (SMESG000018057.1) HSP 1 Score: 306.22 bits (783), Expect = 9.047e-97 Identity = 191/537 (35.57%), Postives = 297/537 (55.31%), Query Frame = 1
Query: 190 DKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLC------EGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKS-LDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTL-PMLQSLAPTLTSLLNQSQMGSMNSRESSRMNY---SNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNL--FDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVG-LSKLRVSFSKG 1755
+K SRV+HIRNV +V + +A LA+PFG I +V RK QAL++M A M DY+++ +P YGK++ IQFS+++ L + + V+ ANE + G +L + I+N + HL FYK+F R+G I RI+ F +N L+EF + +++HVA+LQL G+N +RI+FS L ++ +SD RDY SP+ + EL + + +P+ G SM+ + + ++ + L ++ L P A +L + NQ MN R + + N+ SN++ N + N NSVV+V NLN ++ +PDALF LFGVYGDV RVK+++NKKNTAL+QF + + A A+ NL+ L+GK M ++ SK I +P + + L KDYSNS LHRFK+ S+ QNI+PP V+HL+ +P + E ++ ++ Y + K K + PN +KMAL++L +++ AI LI+ H+ + + LR+SFSK
Sbjct: 24 EKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEG----------------PQYSFPLFAVGRSMSMARGNDQQFMSNITAQLSAMASQTGVELTPAAAMAAASLMAACNQ-----MNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHG--LTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFL-PNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 536
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Match: SMESG000018057.1 (SMESG000018057.1) HSP 1 Score: 306.22 bits (783), Expect = 1.732e-96 Identity = 193/536 (36.01%), Postives = 295/536 (55.04%), Query Frame = 1
Query: 190 DKISRVLHIRNVSSDVTERDIANLAIPFGLISYLVLTRKTGQALMEMHHEESAQAMVDYYSKCLPHFYGKNIVIQFSRYETLSGSGMHPEAETAVKGANEDVRKLC------EGEPKLVLHVTIENWEGSRLGHLHFYKLFQRYGTICRIIVFVQNQSPQALIEFENEVAAHVAKLQLGGSNAFYG-RPVRIEFSTRKS-LDIKHESDTGRDYTISPVRKDELNSIPSFNSSYGMDDHGNANYSQHHDYPVSRQGGSMNNGQMTXXXXXXXXXXXXXXXSNNPNDTLPMLQSLAPTLTSLLNQSQMGSMNSRESSRMNY---SNENLNNTSSSRKSQGNANSVVIVANLNEDRISPDALFILFGVYGDVQRVKILYNKKNTALIQFVDGEHAARAVTNLNNVNLYGKPMRVNFSKHTSISMPKPEEQNSVHLNKDYSNSRLHRFKRATSRTVQNIYPPGTVLHLAGLPESYEEEEIKNL--FDDYAITKVKMINPNQRKMALVQLETIDMAIDALIKLHDCDVG-LSKLRVSFSKG 1755
+K SRV+HIRNV +V + +A LA+PFG I +V RK QAL++M A M DY+++ +P YGK++ IQFS+++ L + + V+ ANE + G +L + I+N + HL FYK+F R+G I RI+ F +N L+EF + +++HVA+LQL G+N +RI+FS L ++ +SD RDY SP+ + EL + + +P+ G SM+ + + M L AS + P A +L + NQ MN R + + N+ SN++ N + N NSVV+V NLN ++ +PDALF LFGVYGDV RVK+++NKKNTAL+QF + + A A+ NL+ L+GK M ++ SK I +P + + L KDYSNS LHRFK+ S+ QNI+PP V+HL+ +P + E ++ ++ Y + K K + PN +KMAL++L +++ AI LI+ H+ + + LR+SFSK
Sbjct: 50 EKPSRVIHIRNVPQEVDDTSVAMLAVPFGYIDNIVFVRKNNQALIQMRELNEAIEMADYFNQYVPLMYGKHLFIQFSKHQQLDLRNNNSNIDKLVQSANEKRKHYLINWANNTGGASEILRILIDNAPNLIINHLVFYKIFSRFGQIIRIVSFTKNNQHHGLVEFASTLSSHVAQLQLNGANLLGDCGTMRIDFSKNPGPLQVQRQSDKVRDYMESPLNRTELQELEG----------------PQYSFPLFAVGRSMSMAR--GNDQQFMTAQLSAMASQTGVELTPAAAMAAASLMAACNQ-----MNHRTADQSNWGFGSNQSQNAMFNPNSGIENGNSVVLVTNLNAEKSNPDALFTLFGVYGDVMRVKVMFNKKNTALVQFANHQQAMTAIRNLDACFLWGKQMHLHVSKTNVIQLPMEDANHG--LTKDYSNSTLHRFKKPNSKNYQNIFPPSAVVHLSNIPPTTSEGDLSDMIRIAGYEVKKFKFL-PNDKKMALLELNSVEDAIHVLIEFHNRKLSEKNHLRISFSKA 559 The following BLAST results are available for this feature:
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Polypyrimidine tract-binding protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30027927 ID=SMED30027927|Name=Polypyrimidine tract-binding protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1794bpback to top protein sequence of SMED30027927-orf-1 >SMED30027927-orf-1 ID=SMED30027927-orf-1|Name=SMED30027927-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=548bp MSKRILDLNENSGSGGKRVCVDKISRVLHIRNVSSDVTERDIANLAIPFGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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