Protein regulator of cytokinesis 1

Overview


Name	Protein regulator of cytokinesis 1
Smed ID	SMED30027830
Length (bp)	2364

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Protein regulator of cytokinesis 1 (SMED30027830) t-SNE clustered cells

Violin plots show distribution of expression levels for Protein regulator of cytokinesis 1 (SMED30027830) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Protein regulator of cytokinesis 1 (SMED30027830) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Protein regulator of cytokinesis 1 (SMED30027830) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30027830

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
posterior side	SMED30027830	SMESG000059381.1	dd_Smed_v4_1852_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
posterior muscle cell	SMED30027830	SMESG000059381.1	dd_Smed_v4_1852_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30027830	SMESG000059381.1	dd_Smed_v4_1852_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Human
Match: RNF38 (ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052])

HSP 1 Score: 82.0333 bits (201), Expect = 1.047e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  341 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 431

[Close]

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  341 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 431

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Human
Match: RNF38 (ring finger protein 38 [Source:HGNC Symbol;Acc:HGNC:18052])

HSP 1 Score: 81.6481 bits (200), Expect = 1.347e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424

[Close]

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424

[Close]

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
Match: toe-4 (Target Of ERK kinase MPK-1 [Source:UniProtKB/TrEMBL;Acc:Q9XUM8])

HSP 1 Score: 67.0106 bits (162), Expect = 2.682e-11
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 2

Query: 1925 GITRQELDT--IPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
            G ++ E+DT  IPT    K + +       +D+D C +CL  F   E I+ LRC+H FH  C+ KWL IN+ CP+CR +
Sbjct:  405 GASKVEIDTFTIPTVYAKKTDGE-------EDEDTCTVCLSSFEDGESIQKLRCNHVFHPECIYKWLDINKRCPMCREE 476

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
Match: C01G6.4 (pep chromosome:WBcel235:II:9271265:9273042:-1 gene:WBGene00007226.1 transcript:C01G6.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C01G6.4)

HSP 1 Score: 56.6102 bits (135), Expect = 5.159e-9
Identity = 31/80 (38.75%), Postives = 39/80 (48.75%), Query Frame = 2

Query: 1907 IDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLC 2146
            +D+ K    R  L+ IP   F     DM         + C IC+ DF P E IR L C H FH  CV++WL  + TCP C
Sbjct:   66 LDEAKKNRIRGLLEQIPADVF---RGDMT-------SNECAICMIDFEPGERIRFLPCMHSFHQECVDEWLMKSFTCPSC 135

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BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
Match: plr-1 (Probable E3 ubiquitin-protein ligase plr-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2B7])

HSP 1 Score: 58.151 bits (139), Expect = 1.641e-8
Identity = 22/47 (46.81%), Postives = 32/47 (68.09%), Query Frame = 2

Query: 2015 KDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
            ++RC+ICLE++     +R+L C H+FH  CV+ WL   R CPLC+ D
Sbjct:  314 QERCVICLEEYEEGTELRVLFCGHEFHPKCVDPWLLSKRRCPLCQFD 360

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BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
Match: C18B12.4 (pep chromosome:WBcel235:X:15036662:15040602:-1 gene:WBGene00007666.1 transcript:C18B12.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C18B12.4)

HSP 1 Score: 56.6102 bits (135), Expect = 4.614e-8
Identity = 29/82 (35.37%), Postives = 41/82 (50.00%), Query Frame = 2

Query: 1919 KPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWL-KINRTCPLCRSDAG 2161
            K  ++++ L  IP +K+             DD D C ICLE F   E +R L C H FH  C++ WL +  + CPLC+   G
Sbjct:  222 KRRLSKRNLKKIPVKKY----------RLGDDPDTCAICLESFASGEKLRHLPCRHVFHCNCIDVWLTQTRKICPLCKRKIG 293

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
Match: H10E21.5 (pep chromosome:WBcel235:III:20531:23962:-1 gene:WBGene00019185.1 transcript:H10E21.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:H10E21.5)

HSP 1 Score: 55.0694 bits (131), Expect = 1.338e-7
Identity = 24/74 (32.43%), Postives = 41/74 (55.41%), Query Frame = 2

Query: 1934 RQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
            R+ L  IPT             +T + +  C +CL+ +   ++IR+L C H +H  C++ WL  +RTCP+C++D
Sbjct:  204 RKALTRIPTMTITPG-------MTQELQSDCAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKND 270

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BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
Match: mura (gene:FBgn0037705 transcript:FBtr0082118)

HSP 1 Score: 88.5817 bits (218), Expect = 1.232e-17
Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 2

Query: 1907 IDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            + + KP G+TR E+D +P+ KF       N +V + D+  C++C+ DF   +++R+L CSH+FH+ CV+KWL+ NRTCP+CR +A
Sbjct: 1044 LGEAKPRGLTRNEIDQLPSYKF-------NPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 1121

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
Match: mura (gene:FBgn0037705 transcript:FBtr0082116)

HSP 1 Score: 87.8113 bits (216), Expect = 1.906e-17
Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 2

Query: 1907 IDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            + + KP G+TR E+D +P+ KF       N +V + D+  C++C+ DF   +++R+L CSH+FH+ CV+KWL+ NRTCP+CR +A
Sbjct:  739 LGEAKPRGLTRNEIDQLPSYKF-------NPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 816

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
Match: mura (gene:FBgn0037705 transcript:FBtr0082117)

HSP 1 Score: 87.8113 bits (216), Expect = 1.906e-17
Identity = 37/85 (43.53%), Postives = 59/85 (69.41%), Query Frame = 2

Query: 1907 IDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            + + KP G+TR E+D +P+ KF       N +V + D+  C++C+ DF   +++R+L CSH+FH+ CV+KWL+ NRTCP+CR +A
Sbjct:  739 LGEAKPRGLTRNEIDQLPSYKF-------NPEVHNGDQSSCVVCMCDFELRQLLRVLPCSHEFHAKCVDKWLRSNRTCPICRGNA 816

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
Match: gzl (gene:FBgn0037442 transcript:FBtr0081721)

HSP 1 Score: 66.2402 bits (160), Expect = 6.852e-11
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 2

Query: 1943 LDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKIN-RTCPLCR 2149
            L  +P  ++ KNN +  Y       D C+ICLEDF+ D+ +R+L CSH +H+ C++ WL  N R CP+C+
Sbjct:  215 LKKLPVLRYTKNNANNKY-------DTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICK 277

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
Match: gzl (gene:FBgn0037442 transcript:FBtr0081722)

HSP 1 Score: 66.2402 bits (160), Expect = 6.852e-11
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 2

Query: 1943 LDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKIN-RTCPLCR 2149
            L  +P  ++ KNN +  Y       D C+ICLEDF+ D+ +R+L CSH +H+ C++ WL  N R CP+C+
Sbjct:  215 LKKLPVLRYTKNNANNKY-------DTCVICLEDFIEDDKLRVLPCSHPYHTHCIDPWLTENRRVCPICK 277

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
Match: rnf44 (ring finger protein 44 [Source:NCBI gene;Acc:767686])

HSP 1 Score: 79.337 bits (194), Expect = 4.539e-15
Identity = 34/101 (33.66%), Postives = 62/101 (61.39%), Query Frame = 2

Query: 1862 ITVSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAG 2161
            + +  Y   L+    + + KP G+T+ +++ +P+ +F   N+         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA 
Sbjct:  332 VEMENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNLENHQ-------SEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADAS 425

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
Match: rnf38 (ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693])

HSP 1 Score: 80.1073 bits (196), Expect = 5.076e-15
Identity = 30/78 (38.46%), Postives = 55/78 (70.51%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  595 GLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 665

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
Match: rnf38 (ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693])

HSP 1 Score: 79.337 bits (194), Expect = 5.149e-15
Identity = 30/78 (38.46%), Postives = 55/78 (70.51%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  393 GLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 463

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
Match: rnf38 (ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693])

HSP 1 Score: 80.1073 bits (196), Expect = 5.299e-15
Identity = 30/78 (38.46%), Postives = 55/78 (70.51%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  583 GLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 653

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
Match: rnf44 (ring finger protein 44 [Source:NCBI gene;Acc:767686])

HSP 1 Score: 79.337 bits (194), Expect = 5.509e-15
Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAG 2161
            G+T+ +++ +P+ +F   N+         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA 
Sbjct:  370 GLTKADIEQLPSYRFNLENHQ-------SEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADAS 441

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
Match: rnf38 (ring finger protein 38 [Source:NCBI gene;Acc:594927])

HSP 1 Score: 81.6481 bits (200), Expect = 1.012e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 424

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
Match: rnf38 (ring finger protein 38 [Source:NCBI gene;Acc:594927])

HSP 1 Score: 82.0333 bits (201), Expect = 1.396e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  409 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 499

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
Match: rnf38 (ring finger protein 38 [Source:NCBI gene;Acc:594927])

HSP 1 Score: 82.0333 bits (201), Expect = 1.466e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  415 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 505

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
Match: rnf38 (ring finger protein 38 [Source:NCBI gene;Acc:594927])

HSP 1 Score: 81.2629 bits (199), Expect = 1.851e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  385 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 475

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
Match: rnf38 (ring finger protein 38 [Source:NCBI gene;Acc:594927])

HSP 1 Score: 81.6481 bits (200), Expect = 2.290e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  626 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 716

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Mouse
Match: Rnf38 (ring finger protein 38 [Source:MGI Symbol;Acc:MGI:1920719])

HSP 1 Score: 78.9518 bits (193), Expect = 6.870e-15
Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 424

[Close]

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 424

[Close]

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  334 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 424

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Mouse
Match: Rnf38 (ring finger protein 38 [Source:MGI Symbol;Acc:MGI:1920719])

HSP 1 Score: 78.5666 bits (192), Expect = 8.910e-15
Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  366 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 456

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Mouse
Match: Rnf44 (ring finger protein 44 [Source:MGI Symbol;Acc:MGI:2145310])

HSP 1 Score: 77.7962 bits (190), Expect = 8.939e-15
Identity = 29/78 (37.18%), Postives = 54/78 (69.23%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  +++         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  272 GLTKADIEQLPSYRFNPDSHQ-------SEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 342

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
Match: sp|Q9H0F5|RNF38_HUMAN (E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens OX=9606 GN=RNF38 PE=1 SV=4)

HSP 1 Score: 81.6481 bits (200), Expect = 9.157e-15
Identity = 36/98 (36.73%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  417 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPNNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 507

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
Match: sp|Q08CG8|RNF44_DANRE (RING finger protein 44 OS=Danio rerio OX=7955 GN=rnf44 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.159e-14
Identity = 30/79 (37.97%), Postives = 53/79 (67.09%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAG 2161
            G+T+ +++ +P+ +F   N+         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA 
Sbjct:  370 GLTKADIEQLPSYRFNLENHQ-------SEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADAS 441

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
Match: sp|Q7L0R7|RNF44_HUMAN (RING finger protein 44 OS=Homo sapiens OX=9606 GN=RNF44 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.640e-14
Identity = 29/78 (37.18%), Postives = 54/78 (69.23%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  +++         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  354 GLTKADIEQLPSYRFNPDSHQ-------SEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICRADA 424

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
Match: sp|Q8BI21|RNF38_MOUSE (E3 ubiquitin-protein ligase RNF38 OS=Mus musculus OX=10090 GN=Rnf38 PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 5.978e-14
Identity = 35/98 (35.71%), Postives = 63/98 (64.29%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  +N+         ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  420 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNHQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKGNRTCPICRADA 510

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
Match: sp|Q4V7B8|RNF44_RAT (RING finger protein 44 OS=Rattus norvegicus OX=10116 GN=Rnf44 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.664e-14
Identity = 29/78 (37.18%), Postives = 54/78 (69.23%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  +++         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  272 GLTKADIEQLPSYRFNPDSHQ-------SEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 342

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
Match: A0A2H1C4B4 (Zinc finger, C3HC4 type OS=Fasciola hepatica OX=6192 GN=D915_10763 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 6.634e-18
Identity = 39/87 (44.83%), Postives = 60/87 (68.97%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNN---------DMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T  ELD++P R + K+N          D   K ++ +++RCMICL+D++  +++R +RC H+FH+ CV+KWLK  RTCPLCR+DA
Sbjct:  487 GLTAGELDSLPVRSYTKSNTVGSNAEQTIDGLSKSSEVEEERCMICLDDYLDKDVLRTMRCRHEFHAKCVDKWLKTKRTCPLCRADA 573

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
Match: A0A504YG59 (RING-type domain-containing protein OS=Fasciola gigantica OX=46835 GN=FGIG_09872 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.235e-17
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 2

Query: 1886 TLDHLP--LIDQPKPGITRQELDTIPTRKFIKNNN---------DMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            TL HL   L    + G+T  ELD++P R + K+N          D   K ++ +++RCMICL+D++  +++R +RC H+FH+ CV+KWLK  RTCPLCR+DA
Sbjct:  897 TLYHLAVQLASNTRRGLTAGELDSLPVRSYTKSNTVGSNAEQTIDGLSKSSEVEEERCMICLDDYLDKDVLRTMRCRHEFHAKCVDKWLKTKRTCPLCRADA 998

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
Match: A0A4E0RZ54 (RING-type domain-containing protein OS=Fasciola hepatica OX=6192 GN=D915_007055 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.513e-17
Identity = 44/102 (43.14%), Postives = 66/102 (64.71%), Query Frame = 2

Query: 1886 TLDHLP--LIDQPKPGITRQELDTIPTRKFIKNNN---------DMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            TL HL   L    + G+T  ELD++P R + K+N          D   K ++ +++RCMICL+D++  +++R +RC H+FH+ CV+KWLK  RTCPLCR+DA
Sbjct: 1040 TLYHLAVQLASNTRRGLTAGELDSLPVRSYTKSNTVGSNAEQTIDGLSKSSEVEEERCMICLDDYLDKDVLRTMRCRHEFHAKCVDKWLKTKRTCPLCRADA 1141

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
Match: A0A4S2L6D8 (RING-type domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_009738 PE=4 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.593e-17
Identity = 40/87 (45.98%), Postives = 59/87 (67.82%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKF---------IKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T++ELDT+P R +         ++N  D       + +DRCMICL+D+ P +++R +RC H+FH+ CV+KWLK  RTCPLCR+DA
Sbjct: 1157 GLTKEELDTLPVRSYGQIHEAPTQLENTKD----CVAETEDRCMICLDDYEPKDLLRAMRCRHEFHAKCVDKWLKTKRTCPLCRADA 1239

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
Match: H2KUM4 (RING finger protein 38 OS=Clonorchis sinensis OX=79923 GN=CLF_109547 PE=4 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.307e-16
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIK-----NNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T++ELDT+P R + K       ++       +  DRCMICL+D+   +++R +RC H+FH+ CV+KWLK  RTCPLCR+DA
Sbjct: 1146 GLTKEELDTLPVRSYGKIHEAPTQHENTKDCVAETDDRCMICLDDYESKDLLRAMRCRHEFHAKCVDKWLKTKRTCPLCRADA 1228

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
Match: rnf44 (ring finger protein 44 [Source:NCBI gene;Acc:103037379])

HSP 1 Score: 80.1073 bits (196), Expect = 2.371e-15
Identity = 30/78 (38.46%), Postives = 53/78 (67.95%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F   N+         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  352 GLTKADIEQLPSYRFNSENHQ-------SEQTLCVVCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADA 422

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
Match: rnf38 (ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693])

HSP 1 Score: 79.337 bits (194), Expect = 6.988e-15
Identity = 35/98 (35.71%), Postives = 62/98 (63.27%), Query Frame = 2

Query: 1868 VSRYLPTLDHLPLIDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            V  Y   L+    + + KP G+T+ +++ +P+ +F  +N+          +  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  567 VENYEALLNLAERLGEAKPRGLTKADIEQLPSYRFNPSNH----------QSECVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 654

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
Match: rnf128a (ring finger protein 128 [Source:NCBI gene;Acc:103044386])

HSP 1 Score: 67.781 bits (164), Expect = 1.359e-11
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 2

Query: 1997 KVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
            K T  D D C +C+E + P +++ +L CSH FH +CVE WL  +RTCP+C+ D
Sbjct:  242 KETGPDADSCAVCIETYKPGDVLSVLTCSHFFHKVCVEPWLLEHRTCPMCKCD 294

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
Match: rnf150a (ring finger protein 150 [Source:NCBI gene;Acc:103037093])

HSP 1 Score: 63.929 bits (154), Expect = 2.773e-10
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 2

Query: 1904 LIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCR 2149
            L D  K  I++ ++ TI  RK          K T+ + D C +C+E + P++++R+L C H FH  CV+ WL+ +RTCP+C+
Sbjct:  239 LGDAAKKAISKLQVRTI--RK--------GDKETESEFDNCAVCIETYKPNDVVRILPCRHVFHKNCVDPWLQDHRTCPMCK 310

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
Match: rnf150a (ring finger protein 150 [Source:NCBI gene;Acc:103037093])

HSP 1 Score: 63.929 bits (154), Expect = 2.966e-10
Identity = 30/82 (36.59%), Postives = 49/82 (59.76%), Query Frame = 2

Query: 1904 LIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCR 2149
            L D  K  I++ ++ TI  RK          K T+ + D C +C+E + P++++R+L C H FH  CV+ WL+ +RTCP+C+
Sbjct:  239 LGDAAKKAISKLQVRTI--RK--------GDKETESEFDNCAVCIETYKPNDVVRILPCRHVFHKNCVDPWLQDHRTCPMCK 310

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
Match: rnf111 (ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-070808-2])

HSP 1 Score: 68.5514 bits (166), Expect = 3.985e-12
Identity = 25/71 (35.21%), Postives = 42/71 (59.15%), Query Frame = 2

Query: 1943 LDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
            ++   +RK ++   D      D+++++C ICL     +E +R L C H FH +CV++WL  N+ CP+CR D
Sbjct:  821 VNNTKSRKSLEKEGDDEGGADDENEEKCTICLSVLEEEEDVRRLPCMHLFHQVCVDQWLTTNKKCPICRVD 891

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
Match: rnf150a (ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE-060213-1])

HSP 1 Score: 63.5438 bits (153), Expect = 6.156e-11
Identity = 24/73 (32.88%), Postives = 44/73 (60.27%), Query Frame = 2

Query: 1931 TRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCR 2149
             ++ +  +P +   K + +     T+ D D C +C+E + P++++R+L C H FH  CV+ WL  +RTCP+C+
Sbjct:  263 AKKAMTKLPLKTIKKGDQE-----TEPDFDNCAVCIEGYKPNDVVRILPCKHLFHKACVDPWLLDHRTCPMCK 330

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003771.1 (pep scaffold:Pmarinus_7.0:GL488469:4:5386:-1 gene:ENSPMAG00000003449.1 transcript:ENSPMAT00000003771.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 51.2174 bits (121), Expect = 2.163e-8
Identity = 22/48 (45.83%), Postives = 30/48 (62.50%), Query Frame = 2

Query: 2009 DDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINR-TCPLCR 2149
            D  D C ICLE++   E +R+L C+H FH  CV+ WL   R  CP+C+
Sbjct:    2 DSYDVCAICLEEYEEGERLRVLPCAHAFHCKCVDPWLTQQRKNCPVCK 49

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
Match: si:ch1073-392o20.1 (ring finger protein 122 [Source:HGNC Symbol;Acc:HGNC:21147])

HSP 1 Score: 49.6766 bits (117), Expect = 2.777e-8
Identity = 18/41 (43.90%), Postives = 25/41 (60.98%), Query Frame = 2

Query: 2024 CMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLC 2146
            C +CLEDF   + + +  C H FH  C+ KWL+I   CP+C
Sbjct:   17 CAVCLEDFREKDELAVCPCKHAFHRKCLVKWLEIRNACPMC 57

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003380.1 (pep scaffold:Pmarinus_7.0:GL476517:4028:13530:1 gene:ENSPMAG00000003092.1 transcript:ENSPMAT00000003380.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 49.6766 bits (117), Expect = 1.178e-7
Identity = 21/59 (35.59%), Postives = 33/59 (55.93%), Query Frame = 2

Query: 1970 IKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLC 2146
            IK     N+    D  + C +CLEDF   + + +  C H FH  C+ +WL+I ++CP+C
Sbjct:   19 IKKGKARNF----DCYETCAVCLEDFTLKDKLGICPCRHAFHRKCLVRWLEIRKSCPMC 73

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
Match: EDO49283 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RH29])

HSP 1 Score: 67.0106 bits (162), Expect = 1.089e-13
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 2

Query: 1907 IDQPKP-GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRT 2134
            I + KP G+TR E+D +PT +    +   N      D  RC++CL DF   +++R L C H++H+ C++KWLK+++T
Sbjct:   16 IGEAKPKGLTRAEIDQLPTYRVTAESKKQN------DDARCVVCLVDFEEKQLVRTLPCLHEYHTRCIDKWLKVHKT 86

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
Match: EDO49300 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RH66])

HSP 1 Score: 60.077 bits (144), Expect = 1.094e-10
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 2

Query: 1937 QELDTIPT--RKFIKNNNDMNYKV-----TDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCR 2149
            QE   + T  R F K    +NYK      +    D C ICLEDF+  E + M +C H +H+ C+ KWL++  +CP+C+
Sbjct:   48 QEQGNVGTQRRSFPKGLKKVNYKKKWLAKSKLKSDMCTICLEDFINKEEVNMCKCGHAYHNKCIMKWLEVRNSCPICQ 125

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
Match: EDO31118 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYV5])

HSP 1 Score: 57.7658 bits (138), Expect = 1.553e-10
Identity = 24/67 (35.82%), Postives = 43/67 (64.18%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKI 2125
            G++++ +D IP+ +F  +N DM+          C++C+ D+   E +R L C+HDFHS C+++WLK+
Sbjct:   36 GLSKEVIDRIPSFRFSASNKDMS-------NGSCVVCMMDYTNREKLRKLPCNHDFHSKCIDRWLKV 95

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
Match: EDO41758 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S3E3])

HSP 1 Score: 60.077 bits (144), Expect = 7.620e-10
Identity = 23/73 (31.51%), Postives = 45/73 (61.64%), Query Frame = 2

Query: 1931 TRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCR 2149
             ++ +  +PTR   K+         +++ D C +CL+ +   E+IR+L C+H++H +C++ WL  +RTCP+C+
Sbjct:  203 AKKAIAKLPTRTVKKDE--------EEEIDSCPVCLDGYKSGEVIRILPCNHEYHKLCIDPWLVEHRTCPMCK 267

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
Match: EDO40583 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6T4])

HSP 1 Score: 49.6766 bits (117), Expect = 3.582e-7
Identity = 21/52 (40.38%), Postives = 29/52 (55.77%), Query Frame = 2

Query: 1991 NYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLC 2146
             Y  +   K  C+IC+ DFM  + IR L C H +H  C++ WL  + TCP C
Sbjct:   75 EYDGSKGKKRECVICMYDFMVGDPIRFLPCMHIYHKDCIDDWLVRSFTCPSC 126

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
Match: ENSORLT00000004098.2 (E3 ubiquitin-protein ligase RNF38 [Source:NCBI gene;Acc:101163418])

HSP 1 Score: 83.1889 bits (204), Expect = 4.078e-16
Identity = 31/78 (39.74%), Postives = 54/78 (69.23%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  NN+         ++  C++C+ DF   +++R+L CSH+FH  CV+KWL+ NRTCP+CR+DA
Sbjct:  564 GLTKGDIEQLPSYRFNPNNHQ-------SEQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRADA 634

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
Match: rnf38 (E3 ubiquitin-protein ligase RNF38 [Source:NCBI gene;Acc:101171057])

HSP 1 Score: 82.8037 bits (203), Expect = 7.357e-16
Identity = 31/78 (39.74%), Postives = 54/78 (69.23%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F  NN          ++  C++C+ DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  634 GLTKADIEQLPSYRFNPNNRQ-------SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADA 704

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
Match: rnf44 (ring finger protein 44 [Source:NCBI gene;Acc:101159595])

HSP 1 Score: 77.411 bits (189), Expect = 1.655e-14
Identity = 30/78 (38.46%), Postives = 53/78 (67.95%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            G+T+ +++ +P+ +F   N+         ++  C++C  DF   +++R+L C+H+FH+ CV+KWLK NRTCP+CR+DA
Sbjct:  362 GLTKADIEQLPSYRFNSENHL-------SEQTLCVVCFSDFECRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICRADA 432

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
Match: si:ch211-59o9.10 (uncharacterized LOC101160975 [Source:NCBI gene;Acc:101160975])

HSP 1 Score: 65.855 bits (159), Expect = 8.758e-11
Identity = 29/76 (38.16%), Postives = 44/76 (57.89%), Query Frame = 2

Query: 1928 ITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
            ++R+E+   PT+KF       N +        C IC  D+   E +RML C HD+H  C+++WLK N TCP+CR++
Sbjct:  362 LSRREIQRFPTKKFHSAKTAGNTQ--------CQICFCDYNDGEKLRMLPCFHDYHVQCIDRWLKDNTTCPICRAN 429

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
Match: ENSORLT00000017784.2 (tetratricopeptide repeat domain 3 [Source:NCBI gene;Acc:101161328])

HSP 1 Score: 64.6994 bits (156), Expect = 3.343e-10
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 2

Query: 2015 KDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTN 2170
            +D C+IC ED  PDE   +L C H FH+ C++ WLK  RTCP CR+ A LT+
Sbjct: 1556 EDPCIICHEDMNPDETA-VLECRHSFHTECIKSWLKEQRTCPTCRTHALLTD 1606

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST
Match: SMESG000059381.1 (SMESG000059381.1)

HSP 1 Score: 1117.45 bits (2889), Expect = 0.000e+0
Identity = 606/608 (99.67%), Postives = 606/608 (99.67%), Query Frame = 2

Query:  356 MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFHPSSLDKNKLINSNFESNWKRRREHHHKTGGFISINSFHSTNLNSVSQRRHSDFDRMTRSSCEIRRQNHSFSDTDRGDHGDPFYRRNGLCSAYQQIPIVDDNQNVXXXXXXXXXXXXXXXLTTLHQISPSSQQHQFIPAKEALINTNVTTHINVQSPQIGRXXXXXXXXXXXTSVHEXXXXXXXXXXXXIRRRHRTCDQPQSYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRSFGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLPTIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFXXXXXXXXXXXXXXXXGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLVQDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSISPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTNHKQ 2179
            MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFHPSSLDKNKLINSNFESNWKRRREHHHKTGGFISINS HSTNLNSVSQRRHSDFDRMTRSSCEIRRQN SFSDTDRGDHGDPFYRRNGLCSAYQQIPIVDDNQNVRRTPPIITHPRPRIHLTTLHQISPSSQQHQFIPAKEALINTNVTTHINVQSPQIGRNNNSCNSINICTSVHENSNNFHNQSQQNIRRRHRTCDQPQSYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRSFGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLPTIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFSVATSTASLITLAAVSGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLVQDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSISPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTNHKQ
Sbjct:    1 MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFHPSSLDKNKLINSNFESNWKRRREHHHKTGGFISINSLHSTNLNSVSQRRHSDFDRMTRSSCEIRRQNRSFSDTDRGDHGDPFYRRNGLCSAYQQIPIVDDNQNVRRTPPIITHPRPRIHLTTLHQISPSSQQHQFIPAKEALINTNVTTHINVQSPQIGRNNNSCNSINICTSVHENSNNFHNQSQQNIRRRHRTCDQPQSYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRSFGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLPTIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFSVATSTASLITLAAVSGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLVQDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSISPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTNHKQ 608

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST
Match: SMESG000059381.1 (SMESG000059381.1)

HSP 1 Score: 1102.81 bits (2851), Expect = 0.000e+0
Identity = 602/608 (99.01%), Postives = 602/608 (99.01%), Query Frame = 2

Query:  356 MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFHPSSLDKNKLINSNFESNWKRRREHHHKTGGFISINSFHSTNLNSVSQRRHSDFDRMTRSSCEIRRQNHSFSDTDRGDHGDPFYRRNGLCSAYQQIPIVDDNQNVXXXXXXXXXXXXXXXLTTLHQISPSSQQHQFIPAKEALINTNVTTHINVQSPQIGRXXXXXXXXXXXTSVHEXXXXXXXXXXXXIRRRHRTCDQPQSYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRSFGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLPTIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFXXXXXXXXXXXXXXXXGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLVQDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSISPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTNHKQ 2179
            MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFHPSSLDKNKLINSNFESNWKRRREHHHKTGGFISINS HSTNLNSVSQRRHSDFDRMTRSSCEIRRQN SFSDTDRGDHGDPFYRRN    AYQQIPIVDDNQNVRRTPPIITHPRPRIHLTTLHQISPSSQQHQFIPAKEALINTNVTTHINVQSPQIGRNNNSCNSINICTSVHENSNNFHNQSQQNIRRRHRTCDQPQSYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRSFGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLPTIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFSVATSTASLITLAAVSGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLVQDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSISPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTNHKQ
Sbjct:    1 MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFHPSSLDKNKLINSNFESNWKRRREHHHKTGGFISINSLHSTNLNSVSQRRHSDFDRMTRSSCEIRRQNRSFSDTDRGDHGDPFYRRN----AYQQIPIVDDNQNVRRTPPIITHPRPRIHLTTLHQISPSSQQHQFIPAKEALINTNVTTHINVQSPQIGRNNNSCNSINICTSVHENSNNFHNQSQQNIRRRHRTCDQPQSYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRSFGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLPTIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFSVATSTASLITLAAVSGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLVQDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSISPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGLTNHKQ 604

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST
Match: SMESG000010278.1 (SMESG000010278.1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.374e-21
Identity = 47/105 (44.76%), Postives = 69/105 (65.71%), Query Frame = 2

Query: 1880 LPTLDHLPL-IDQPKPGITRQELDTIPTRKFI--------KNNNDMNYKVTDDDKD---RCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDA 2158
            + TL HL    +Q K GITR+ELD +PT ++         ++ N ++   T + K+   +C++CLEDF   + IR L+C H+FH+ C++KWLKINRTCPLCR+DA
Sbjct:  410 IDTLLHLAAHFEQRKRGITREELDKLPTHRYKTTSDKHKQRDKNSLSDAKTANSKEGVPKCLVCLEDFESKQNIRALKCEHEFHAKCIDKWLKINRTCPLCRADA 514

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST
Match: SMESG000016770.1 (SMESG000016770.1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.045e-17
Identity = 38/81 (46.91%), Postives = 57/81 (70.37%), Query Frame = 2

Query: 1925 GITRQELDTIPTRKFIKNNNDMNYKVTD-DDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSDAGL 2164
            GI   EL  +P   +    ND+N   TD + +D+CM+CLE+F+ ++ +R L CSH +H +CV+KWL++NRTCP+CR+DA L
Sbjct:  681 GINPSELAQLPCHYY---KNDLNASNTDLERQDKCMVCLEEFLENDHLRTLSCSHQYHVMCVDKWLRMNRTCPMCRADATL 758

[Close]

BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST
Match: SMESG000028227.1 (SMESG000028227.1)

HSP 1 Score: 65.0846 bits (157), Expect = 1.094e-10
Identity = 26/75 (34.67%), Postives = 46/75 (61.33%), Query Frame = 2

Query: 1931 TRQELDTIPTRKFIKNNNDMNYKVTDDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD 2155
             ++ L+ IP +    ++ +++Y     D D+C IC++++   E IR+L C H FH IC++ WL   R+CP+C+ D
Sbjct:  238 AKKALNKIPVKILSSDDKEVSY-----DYDQCAICIDNYQVGETIRILPCKHIFHKICIDSWLIEQRSCPMCKVD 307

The following BLAST results are available for this feature:

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Human
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Mouse
BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Yeast
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RNF38	1.047e-15	36.73	ring finger protein 38 [Source:HGNC Symbol;Acc:HGN...	[more]
RNF38	1.047e-15	36.73	ring finger protein 38 [Source:HGNC Symbol;Acc:HGN...	[more]
RNF38	1.347e-15	36.73	ring finger protein 38 [Source:HGNC Symbol;Acc:HGN...	[more]
RNF38	1.347e-15	36.73	ring finger protein 38 [Source:HGNC Symbol;Acc:HGN...	[more]
RNF38	1.347e-15	36.73	ring finger protein 38 [Source:HGNC Symbol;Acc:HGN...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
toe-4	2.682e-11	40.51	Target Of ERK kinase MPK-1 [Source:UniProtKB/TrEM...	[more]
C01G6.4	5.159e-9	38.75	pep chromosome:WBcel235:II:9271265:9273042:-1 gene...	[more]
plr-1	1.641e-8	46.81	Probable E3 ubiquitin-protein ligase plr-1 [Sourc...	[more]
C18B12.4	4.614e-8	35.37	pep chromosome:WBcel235:X:15036662:15040602:-1 gen...	[more]
H10E21.5	1.338e-7	32.43	pep chromosome:WBcel235:III:20531:23962:-1 gene:WB...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mura	1.232e-17	43.53	gene:FBgn0037705 transcript:FBtr0082118	[more]
mura	1.906e-17	43.53	gene:FBgn0037705 transcript:FBtr0082116	[more]
mura	1.906e-17	43.53	gene:FBgn0037705 transcript:FBtr0082117	[more]
gzl	6.852e-11	41.43	gene:FBgn0037442 transcript:FBtr0081721	[more]
gzl	6.852e-11	41.43	gene:FBgn0037442 transcript:FBtr0081722	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rnf44	4.539e-15	33.66	ring finger protein 44 [Source:NCBI gene;Acc:76768...	[more]
rnf38	5.076e-15	38.46	ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rnf38	5.149e-15	38.46	ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rnf38	5.299e-15	38.46	ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rnf44	5.509e-15	37.97	ring finger protein 44 [Source:NCBI gene;Acc:76768...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rnf38	1.012e-15	36.73	ring finger protein 38 [Source:NCBI gene;Acc:59492...	[more]
rnf38	1.396e-15	36.73	ring finger protein 38 [Source:NCBI gene;Acc:59492...	[more]
rnf38	1.466e-15	36.73	ring finger protein 38 [Source:NCBI gene;Acc:59492...	[more]
rnf38	1.851e-15	36.73	ring finger protein 38 [Source:NCBI gene;Acc:59492...	[more]
rnf38	2.290e-15	36.73	ring finger protein 38 [Source:NCBI gene;Acc:59492...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rnf38	6.870e-15	35.71	ring finger protein 38 [Source:MGI Symbol;Acc:MGI:...	[more]
Rnf38	6.870e-15	35.71	ring finger protein 38 [Source:MGI Symbol;Acc:MGI:...	[more]
Rnf38	6.870e-15	35.71	ring finger protein 38 [Source:MGI Symbol;Acc:MGI:...	[more]
Rnf38	8.910e-15	35.71	ring finger protein 38 [Source:MGI Symbol;Acc:MGI:...	[more]
Rnf44	8.939e-15	37.18	ring finger protein 44 [Source:MGI Symbol;Acc:MGI:...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q9H0F5\|RNF38_HUMAN	9.157e-15	36.73	E3 ubiquitin-protein ligase RNF38 OS=Homo sapiens ...	[more]
sp\|Q08CG8\|RNF44_DANRE	4.159e-14	37.97	RING finger protein 44 OS=Danio rerio OX=7955 GN=r...	[more]
sp\|Q7L0R7\|RNF44_HUMAN	5.640e-14	37.18	RING finger protein 44 OS=Homo sapiens OX=9606 GN=...	[more]
sp\|Q8BI21\|RNF38_MOUSE	5.978e-14	35.71	E3 ubiquitin-protein ligase RNF38 OS=Mus musculus ...	[more]
sp\|Q4V7B8\|RNF44_RAT	6.664e-14	37.18	RING finger protein 44 OS=Rattus norvegicus OX=101...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A2H1C4B4	6.634e-18	44.83	Zinc finger, C3HC4 type OS=Fasciola hepatica OX=61...	[more]
A0A504YG59	1.235e-17	43.14	RING-type domain-containing protein OS=Fasciola gi...	[more]
A0A4E0RZ54	1.513e-17	43.14	RING-type domain-containing protein OS=Fasciola he...	[more]
A0A4S2L6D8	1.593e-17	45.98	RING-type domain-containing protein OS=Opisthorchi...	[more]
H2KUM4	1.307e-16	45.78	RING finger protein 38 OS=Clonorchis sinensis OX=7...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rnf44	2.371e-15	38.46	ring finger protein 44 [Source:NCBI gene;Acc:10303...	[more]
rnf38	6.988e-15	35.71	ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rnf128a	1.359e-11	47.17	ring finger protein 128 [Source:NCBI gene;Acc:1030...	[more]
rnf150a	2.773e-10	36.59	ring finger protein 150 [Source:NCBI gene;Acc:1030...	[more]
rnf150a	2.966e-10	36.59	ring finger protein 150 [Source:NCBI gene;Acc:1030...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rnf111	3.985e-12	35.21	ring finger protein 111 [Source:ZFIN;Acc:ZDB-GENE-...	[more]
rnf150a	6.156e-11	32.88	ring finger protein 150a [Source:ZFIN;Acc:ZDB-GENE...	[more]
ENSPMAT00000003771.1	2.163e-8	45.83	pep scaffold:Pmarinus_7.0:GL488469:4:5386:-1 gene:...	[more]
si:ch1073-392o20.1	2.777e-8	43.90	ring finger protein 122 [Source:HGNC Symbol;Acc:HG...	[more]
ENSPMAT00000003380.1	1.178e-7	35.59	pep scaffold:Pmarinus_7.0:GL476517:4028:13530:1 ge...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO49283	1.089e-13	37.66	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO49300	1.094e-10	37.18	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO31118	1.553e-10	35.82	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO41758	7.620e-10	31.51	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO40583	3.582e-7	40.38	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000004098.2	4.078e-16	39.74	E3 ubiquitin-protein ligase RNF38 [Source:NCBI gen...	[more]
rnf38	7.357e-16	39.74	E3 ubiquitin-protein ligase RNF38 [Source:NCBI gen...	[more]
rnf44	1.655e-14	38.46	ring finger protein 44 [Source:NCBI gene;Acc:10115...	[more]
si:ch211-59o9.10	8.758e-11	38.16	uncharacterized LOC101160975 [Source:NCBI gene;Acc...	[more]
ENSORLT00000017784.2	3.343e-10	51.92	tetratricopeptide repeat domain 3 [Source:NCBI gen...	[more]

BLAST of Protein regulator of cytokinesis 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000059381.1	0.000e+0	99.67	SMESG000059381.1	[more]
SMESG000059381.1	0.000e+0	99.01	SMESG000059381.1	[more]
SMESG000010278.1	1.374e-21	44.76	SMESG000010278.1	[more]
SMESG000016770.1	1.045e-17	46.91	SMESG000016770.1	[more]
SMESG000028227.1	1.094e-10	34.67	SMESG000028227.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30027830 ID=SMED30027830|Name=Protein regulator of cytokinesis 1|organism=Schmidtea mediterranea sexual|type=transcript|length=2364bp
GTTTAATGTAAATTCTAAATTTCATTGGATTTTTGGAAGAGCTATAAATA
CATGCGTGTTGTATGCGTGTTGTATGACCTCAATACTGGTAGATAGAAAT
TGTGTCTCAATTTCAAGGTCATAAGAGAAGACAAATAACAGTCGAAAGAG
TAGATAAACATACAAAAGTAGTTAGAAAATTATATGTGTGCATAGCTAAA
GAATGCAAGTCATTTCAAATCAATAAATAACAATTGTTAAGCTATATCTA
GGTTACAAGCATTTAAAGTGATTTATAAAAACTGATTTGTAGAGGCATGA
AGTTTATAATAAATCTTTGAATTTATGTTTTGGATGTTTTATCGCCTTAA
ATGGTATGTTGGAATCGTCTGTTGTTTCAAATAAAATAAACATTGGACCA
CCTTTTATTAACAATAGCAACATAAGATTAAAATTAGAAAATTGGATAGG
ATCAGATAAATCAACTAATCTCACAAGAAATAGCTCAAATAGAAAACGAT
TCCACCCATCTTCTTTAGATAAAAATAAACTAATCAACTCAAATTTTGAA
AGTAATTGGAAACGTAGAAGAGAACATCATCATAAAACTGGTGGATTTAT
TTCTATAAATTCTTTTCATTCCACAAACTTAAACAGTGTTAGTCAAAGAC
GACATTCTGATTTTGATAGAATGACAAGATCAAGTTGCGAAATAAGGCGA
CAGAATCACAGCTTTTCTGATACCGACAGAGGTGATCATGGAGACCCATT
TTATAGACGAAATGGTTTATGTTCAGCTTATCAACAAATACCCATTGTTG
ATGATAATCAAAATGTTCGCAGAACACCACCAATAATCACTCATCCGAGA
CCGCGCATCCATTTGACCACATTGCATCAGATATCACCATCTTCTCAGCA
GCACCAATTTATTCCAGCCAAAGAGGCCTTGATAAACACCAATGTGACGA
CTCATATTAATGTCCAATCGCCCCAGATTGGTAGAAATAATAATTCATGC
AACTCTATTAATATCTGCACATCAGTACATGAAAACAGTAACAATTTTCA
TAACCAATCTCAACAAAATATCAGAAGGCGTCATCGTACATGTGATCAAC
CTCAATCTTATCAACTTAATTCAACCACACAAACTCCATTCGTTACACCA
AGAACAGTTAATAATGTCTCTTCTCAATCAGCTCTAGCTGCTTGCAGCAT
TCCAAATCGTACTATATGTCACAACTCCACTTCATTTCCTTCTGTTACTC
GCTCATTTGGCCAGAACTCCAATCAGCTCAGATTTACAACGTATCCACTG
ACTGCCTATACTCCTCAGCAACCATCTATATTTTCTCGTCATTCTCTACC
GACAAATAGCATTCATACTCACAATTCAGCCTTTTGTTCTGCCGTCCAGT
TACCAACAATTATCGGTGATGTGTTCACCTCAGCACCTTGTCATCAATGT
GCTATTATTGCAAGTTCTGGTTTAAATGCATTCTCAAACTTGTCTTCAAT
GCTACAGTTTTCAGTTGCAACATCAACAGCTAGTCTCATTACTTTAGCTG
CTGTTTCAGGAGACCGAGTTCACGGCTCTAGGCTTAGTTATGTACCAGTT
CACACCGTAAATCATTGGCACAATCATCATCCGTATTTACCTGCCGCATG
GAGTTACAACGATCTAACATCAATTTTACAGAATCCCACCGCGAGAAACC
TGGTCCAGGATCAATTGGCTCAACGAATGTTATCGGGGTCGGCAAATGTA
GGTGTACAACTTGTAATGCTTGCTCCATCGTCAGTAGTTGGATCAAGCAA
TGATCATTCACAACTCAGACATCACATTTATCCATTACCACGAACCGATT
CTATTTCCCCGATCACAGTATCTCGTTATCTGCCTACTCTTGACCATTTG
CCATTGATCGATCAACCGAAACCAGGAATAACCCGACAAGAACTTGATAC
GATTCCAACAAGAAAATTCATAAAAAACAACAATGATATGAATTATAAAG
TTACTGATGATGATAAAGATCGCTGTATGATTTGTCTAGAAGATTTCATG
CCTGATGAGATCATCCGTATGTTGAGATGTTCACATGATTTTCATTCTAT
TTGCGTTGAAAAGTGGTTGAAAATTAATCGCACTTGTCCACTTTGCCGTT
CCGACGCAGGCTTGACTAATCACAAACAGTAACAACACGATATTAGCGAA
AGTAGATATCAGAATTATTATTAATTAGCTTTAGTTGTTCTGTGTGTTGA
CTGATCTTATATTAGTGCATGCACTTGGTGCTCGTATTATCATATTTTAT
ACTTTCTCTTTTATTAATTTTTATTAGTGGCCAACTGCTATTGTTTTAAT
GTGCACTTGCAATG

protein sequence of SMED30027830-orf-1

>SMED30027830-orf-1 ID=SMED30027830-orf-1|Name=SMED30027830-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=609bp
MLESSVVSNKINIGPPFINNSNIRLKLENWIGSDKSTNLTRNSSNRKRFH
PSSLDKNKLINSNFESNWKRRREHHHKTGGFISINSFHSTNLNSVSQRRH
SDFDRMTRSSCEIRRQNHSFSDTDRGDHGDPFYRRNGLCSAYQQIPIVDD
NQNVRRTPPIITHPRPRIHLTTLHQISPSSQQHQFIPAKEALINTNVTTH
INVQSPQIGRNNNSCNSINICTSVHENSNNFHNQSQQNIRRRHRTCDQPQ
SYQLNSTTQTPFVTPRTVNNVSSQSALAACSIPNRTICHNSTSFPSVTRS
FGQNSNQLRFTTYPLTAYTPQQPSIFSRHSLPTNSIHTHNSAFCSAVQLP
TIIGDVFTSAPCHQCAIIASSGLNAFSNLSSMLQFSVATSTASLITLAAV
SGDRVHGSRLSYVPVHTVNHWHNHHPYLPAAWSYNDLTSILQNPTARNLV
QDQLAQRMLSGSANVGVQLVMLAPSSVVGSSNDHSQLRHHIYPLPRTDSI
SPITVSRYLPTLDHLPLIDQPKPGITRQELDTIPTRKFIKNNNDMNYKVT
DDDKDRCMICLEDFMPDEIIRMLRCSHDFHSICVEKWLKINRTCPLCRSD
AGLTNHKQ*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **biological process**
Term	Definition
GO:0000226	microtubule cytoskeleton organization
GO:0001578	microtubule bundle formation
GO:0032465	regulation of cytokinesis

Vocabulary: **cellular component**
Term	Definition
GO:0005856	cytoskeleton

Vocabulary: **molecular function**
Term	Definition
GO:0008017	microtubule binding
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000034	epidermis
PLANA:0000101	muscle cell
PLANA:0000142	posterior region of the whole animal

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 557..597 e-value: 1.4E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 556..598 e-value: 8.1E-12 score: 45.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 557..598 score: 12.873
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 525..604 e-value: 2.2E-19 score: 70.4
None	No IPR available	PANTHER	PTHR46171	FAMILY NOT NAMED	coord: 524..601
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 557..598 e-value: 3.15651E-16 score: 70.4085
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 549..601

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Protein regulator of cytokinesis 1

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Owlery

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