Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2

Overview
NameRetrovirus-related Pol polyprotein from type-1 retrotransposable element R2
Smed IDSMED30027800
Length (bp)7747
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (SMED30027800) t-SNE clustered cells

Violin plots show distribution of expression levels for Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (SMED30027800) in cells (dots) of each of the 12 neoblast clusters.

 

back to top


 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (SMED30027800) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (SMED30027800) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top


 

Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020




SMED30027800

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30027800 SmedASXL_018362SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016
whole organism asexual adult RNA-sequencing evidence
X1 cellSMED30027800 SmedASXL_017904SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30027800 SmedASXL_017904SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
X1 cellSMED30027800 SmedASXL_078295SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30027800 dd_Smed_v4_19123_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30027800 dd_Smed_v4_19123_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30027800 dd_Smed_v4_19123_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30027800 dd_Smed_v4_19123_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Zebrafish
Match: CU638714.1 (pep chromosome:GRCz11:24:19863246:19868789:1 gene:ENSDARG00000100303.2 transcript:ENSDART00000165242.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CU638714.1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.084e-20
Identity = 69/225 (30.67%), Postives = 114/225 (50.67%), Query Frame = 2
Query: 4646 EIMFQLKRADNTSPGIDGIQ---YRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVL 5311
            E M QL  ++  SPGIDG+    YR             FL       K++P S +     L PK    G    + +WRP++LL + YK+ + CLA+R+ + +    L+   Q         +++  +L   ++ S  +    L +  LD + AF  V H Y++++L+  G GE+F S ++LLYS+       G  L+  +PI +G++QGCP+S  L++L I P+L
Sbjct:  484 EAMQQL--SNGRSPGIDGLPVEFYRQFWNEIGMDLYEVFL--SCFKEKLLPLSCRRAVLSLLPKK---GDLCLLKNWRPVSLLCLDYKILSKCLANRIMHCLQF--LIENDQTYCVPDRSIIDNIFMLRDVVDFSHLTSK-DLGVLSLDQEKAFDRVDHGYLFNVLKNFGFGEEFLSYIKLLYSNVFIMVKAGGALSAQVPIGRGIRQGCPLSGQLYSLMIEPLL 698          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Zebrafish
Match: CABZ01033394.1 (pep chromosome:GRCz11:13:6032844:6038477:-1 gene:ENSDARG00000101795.2 transcript:ENSDART00000166130.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CABZ01033394.1)

HSP 1 Score: 95.5153 bits (236), Expect = 7.454e-19
Identity = 71/248 (28.63%), Postives = 121/248 (48.79%), Query Frame = 2
Query: 4634 FSNFEIMFQLKRAD-NTSPGIDG--IQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVK 5368
             S  E++  LK      +PGIDG  I++  +         L  L N+ +    +P S +     L PK    G   ++ +WRP++LL   +K+ +  LA+RL   I   +++H  Q         +++ S++   L+ S Y  N  L +  +D + AF  V H Y+W+ L   G G  F  ++++LY D  +       L+    I +G++QGC +S +L++LAI P+L  + RS  E FM+    V+
Sbjct:  478 LSELELLTALKAMQPGKAPGIDGLPIEFYKIFWDVLGEDFLAVL-NESLTEGSLPLSCRRAVVTLLPKK---GDLQEIKNWRPVSLLCSDFKILSKTLANRLKNVIG--HIIHPDQTYCVPGRSIMDNISLVRDILDLSSYF-NLDLGLISIDQEKAFDRVEHQYLWNTLEAFGFGSGFIGMIKVLYQDIESVLKINGGLSAPFKINRGIRQGCALSGMLYSLAIEPMLRKL-RSRIEGFMLANKSVQ 717          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Zebrafish
Match: si:dkey-187k19.2 (si:dkey-187k19.2 [Source:ZFIN;Acc:ZDB-GENE-131121-68])

HSP 1 Score: 93.2041 bits (230), Expect = 1.810e-18
Identity = 66/209 (31.58%), Postives = 106/209 (50.72%), Query Frame = 2
Query: 4676 NTSPGIDGIQYRDXXXXXXXXXXXTF-LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAI 5299
            N SPG DG+     L      +   F ++ + I  K +P S K     L PKPNKD    D  +WRPI LL+V YK+ +   A RL   +N   ++   Q G         +  ++   L++S   ++  L + +LD   AF ++ H +M+  L++ G G+ F SI++L + D ++  +  P  +   PI +GV+QGCPI+  LF L +
Sbjct:  185 NKSPGSDGLSVEFYLHFWNIIENPLFEMYKESIELKELPTSLKQGLITLLPKPNKDLMILD--NWRPITLLNVDYKLLSLIYAKRLKEGLN--EIISEYQTGFMAGRHISWNIRLILDLLDYSNLIESEALLL-FLDFHKAFDTIEHQFMFMALKYFGFGDRFISIMELFHRDINSSINLYPNTSKRFPICRGVRQGCPIAPFLFLLVV 388          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Zebrafish
Match: BX323564.1 (pep chromosome:GRCz11:2:10597810:10600950:-1 gene:ENSDARG00000098557.2 transcript:ENSDART00000160216.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX323564.1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.827e-18
Identity = 66/209 (31.58%), Postives = 105/209 (50.24%), Query Frame = 2
Query: 4676 NTSPGIDGIQYRDXXXXXXXXXXXTF-LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAI 5299
            N SPG DG+     L      +   F ++ + I  K +P S K     L PKPNKD    D  +WRPI LL+V YK+ +   A RL      N ++   Q G         +  ++   L++S   ++  L + +LD   AF ++ H +M+  L++ G G+ F SI++L + D ++  +  P  +   PI +GV+QGCPI+  LF L +
Sbjct:  185 NKSPGSDGLSVEFYLHFWNIIENPLFEMYKESIELKELPTSLKQGLITLLPKPNKDLMILD--NWRPITLLNVDYKLLSLIYAKRLKE--GLNEIISEYQTGFMAGRHISWNIRLILDLLDYSNLIESEALLL-FLDFHKAFDTIEHQFMFMALKYFGFGDRFISIMELFHRDINSSINLYPNTSKRFPICRGVRQGCPIAPFLFLLVV 388          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Zebrafish
Match: BX284696.1 (pep chromosome:GRCz11:7:42935126:42939263:1 gene:ENSDARG00000099710.2 transcript:ENSDART00000157747.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX284696.1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.751e-18
Identity = 90/322 (27.95%), Postives = 147/322 (45.65%), Query Frame = 2
Query: 4652 MFQLKRADNTSPGIDGIQYRDXXXX-XXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPV-LEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXK-SVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGE 5608
            +F +K+  N SPGIDG               +L  L+N+ I  K +  + K     L PKP KD    D  +WRPI LL+V YK+ A   ++RL   +N   L+    + G  +   + +N  L   L       N    I +LD   AF ++ H ++   L+  G G  F +++++ Y D S+        +    +++GV+QGCPIS  LF L    + +  ++  D +   I E  +KI   ADD  L  K S +    I +I   + A  G     +KC  L L   +   ++++N   +KK +     +YLG+ + +
Sbjct:  466 LFSMKK--NKSPGIDGFSVEFYTHFWYLIQDILLILYNECIAEKEMSTTMKQGIISLIPKPEKDSLLID--NWRPITLLTVDYKILALVFSNRLKTKLN---LMITESQSGFLNGRHISNNIRLVLDLIDYADFINSKAIIFFLDFYKAFDTIEHKFLLHSLKKFGFGSTFINVIEMFYKDISSSIIINMFTSQRFTLERGVRQGCPISPFLFILVTELLSISLINNQDLKGINIFEREIKISQLADDTTLFLKDSYQINDAIKSIKTFSDAS-GLHLNLDKCEILTLYDCN---DLILNGIPVKKTV-----KYLGIYINK 771          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Xenopus
Match: ENSXETT00000002428.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:3:15907829:15913358:1 gene:ENSXETG00000006437.1 transcript:ENSXETT00000002428.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 99.3673 bits (246), Expect = 6.863e-20
Identity = 67/195 (34.36%), Postives = 101/195 (51.79%), Query Frame = 2
Query: 4748 TFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKG--GSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSR 5326
            T ++ + I   I+P+S      +L PKP KD +     S+RPI+LL+   K++A  LA RL   I T  L++  Q G   ++          L+ +L  S        AIA LDI  AF +V   Y+W +L+ +G G  F +++QLLY           + T N  + +G +QGCP+S +LFALAI P  +AV +
Sbjct:  489 TKMYGEAISTGILPESMYEAAIILLPKPGKDPQL--CESFRPISLLTTDVKIYAKILARRLARVIKT--LVNPDQIGFIPTKTTALNTRRLYLNLSLTPSNTGNR---AIAALDIAKAFDTVEWSYLWCVLKQLGFGPTFINMVQLLYKSPRATLRINSLCTSNFTLSRGTRQGCPLSPLLFALAIEPFAQAVRK 676          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Xenopus
Match: rpl22l1 (ribosomal protein L22 like 1 [Source:Xenbase;Acc:XB-GENE-6073103])

HSP 1 Score: 91.2781 bits (225), Expect = 5.827e-19
Identity = 60/194 (30.93%), Postives = 98/194 (50.52%), Query Frame = 2
Query: 4754 LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKG--GSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRS 5329
            LFN +     +PDS +    ++ PKP KD +  + +S+RPI+L++   K+ A  LA RL   I    L+ I Q G   +R           + ++ H          IA LD + AF SV   Y+W+ L+ +G  E+FT  +Q LY D          ++    +++G +QGCP+S +LFA+A+ P+   + +S
Sbjct:   18 LFNDVREGAPLPDSMRRAMIIVLPKPGKDPR--ECASYRPISLMNCDAKILAKILARRLNQVIT--QLIEIDQSGFIPTRTTDINIRRLYTNLSVTHDNAGSRV---IATLDNEKAFDSVEWAYLWATLQSMGFKENFTKWIQALYRDPEATIRTNQNISLPFALQRGTRQGCPLSPLLFAIAMEPLATLIRQS 204          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Xenopus
Match: slc7a1 (solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:Xenbase;Acc:XB-GENE-984439])

HSP 1 Score: 92.8189 bits (229), Expect = 1.963e-18
Identity = 67/203 (33.00%), Postives = 96/203 (47.29%), Query Frame = 2
Query: 4754 LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGC-VEHNSILSAALEHSKYSKNCPLA-----IAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPF 5344
            +F   +   ++P S +   +L+     KD    DV +WRPIALL+   K+ A  L SRL  +  T  LL       SR   C V+  SI  A L   +  + C        +  LD   AF  V H Y+W+ LR  G+ + F   L +LY +  +F         N  ++ GV+QGCP+S +L+  AI+P L AV   D E F
Sbjct:  206 VFRDCLGGGVLPPSMR-LSSLVLLSKGKDPS--DVKNWRPIALLNTDRKLLAKVLFSRLILFSGT--LL-------SREQFCTVKGRSIFGALLSIREVLETCKAQSSRRYVVGLDQAKAFDRVDHQYLWATLRKYGIPDQFVEWLTVLYREGESFPLVNGWRGENFGVEAGVRQGCPLSPLLYVFAIDPFLRAVQALDLEGF 396          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Xenopus
Match: ENSXETT00000032317.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:1:130520927:130524992:-1 gene:ENSXETG00000008594.1 transcript:ENSXETT00000032317.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 93.5893 bits (231), Expect = 4.693e-18
Identity = 63/189 (33.33%), Postives = 92/189 (48.68%), Query Frame = 2
Query: 4754 LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAV 5320
            LF + +     P+S      +L PK  KD       S+RPI+LL+   K+FA  LA RL+  I    ++H  Q G         +   L   L H+   +    AIA LDI  AF +V   Y+W +L   G G+ +  ++QLLY           + TP   + +G +QGCP+S +LFA+AI P  +AV
Sbjct:  491 LFKEAVQLGQFPESLYEAAIVLLPKQGKDPHL--CESFRPISLLTADVKIFAKVLARRLSRVIT--KIIHPDQIGFIPAKTAALNTRRLYLNLAHASAGQGAK-AIAALDITKAFDTVEWPYLWQVLTHFGFGKKYIQMVQLLYKYPVASIRINSLTTPAFALSRGTRQGCPLSPLLFAIAIEPFAQAV 674          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Xenopus
Match: ENSXETT00000040456.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:8:87387561:87390644:-1 gene:ENSXETG00000021299.1 transcript:ENSXETT00000040456.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 92.8189 bits (229), Expect = 5.092e-18
Identity = 63/189 (33.33%), Postives = 92/189 (48.68%), Query Frame = 2
Query: 4754 LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAV 5320
            LF + +     P+S      +L PK  KD       S+RPI+LL+   K+FA  LA RL+  I    ++H  Q G         +   L   L H+   +    AIA LDI  AF +V   Y+W +L   G G+ +  ++QLLY           + TP   + +G +QGCP+S +LFA+AI P  +AV
Sbjct:  121 LFKEAVQLGQFPESLYEAAIVLLPKQGKDPHL--CESFRPISLLTADVKIFAKVLARRLSRVIT--KIIHPDQIGFIPAKTAALNTRRLYLNLAHASAGQGAK-AIAALDITKAFDTVEWPYLWQVLTHFGFGKKYIQMVQLLYKYPVASIRINSLTTPAFALSRGTRQGCPLSPLLFAIAIEPFAQAV 304          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. UniProt/SwissProt
Match: sp|Q03278|PO21_NASVI (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Nasonia vitripennis OX=7425 PE=4 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 8.522e-18
Identity = 109/396 (27.53%), Postives = 178/396 (44.95%), Query Frame = 2
Query: 4754 LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCE--PFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLP--------KVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSK-SNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            LFN I+ +   P  +   +T+L PK  + G  D  + +RP+++ SV  + F   LA+R    I  + LL   Q+     DG  E+ S+LSA ++ ++  K   L IA LD+K AF SV H  +   LR   +  +  + +  +Y ++ T           I   +GV+QG P+S +LF    N V++AV R   E   F++G   +  L +ADD+ L+A++ E LQ   +       E G E  P KC  L L         KV       + N +I +L   + ++YLGV         P  +      D +++  + L   Q++    +F+  R I            L + SN +  +   I   +R   R  L LP+ + + YF+   + GG
Sbjct:  355 LFNMIMYHGQCPRRYLDSRTVLIPK--EPGTMDP-ACFRPLSIASVALRHFHRILANR----IGEHGLLDTRQRAFIVADGVAENTSLLSAMIKEARM-KIKGLYIAILDVKKAFDSVEHRSILDALRRKKLPLEMRNYIMWVYRNSKTRLEVVKTKGRWIRPARGVRQGDPLSPLLF----NCVMDAVLRRLPENTGFLMGAEKIGALVFADDLVLLAETREGLQASLSRIEAGLQEQGLEMMPRKCHTLALVPSGKEKKIKVETHKPFTVGNQEITQLGHADQWKYLGVVYN---SYGPIQVKINIAGDLQRVTAAPLKPQQRMAILGMFLIPRFIHKL--------VLGRTSNADVRKGDKI---IRKTVRGWLRLPHDTPIGYFHAPIKEGG 724          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. UniProt/SwissProt
Match: sp|Q03274|PO22_POPJA (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Popillia japonica OX=7064 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.804e-15
Identity = 67/241 (27.80%), Postives = 114/241 (47.30%), Query Frame = 2
Query: 4646 EIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGP-ILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPV 5365
            EI   +K    ++PG DG+  + +                 ++   +P  W + +T L PK   DG  ++ S+WRPI + S + ++    LA RL   +     LH  QKG +R DG +  NS+L      S+  +     +  LD++ AF +V H  +   L+ +G+ E  ++ +    SD++T    GP   T  I I++GVKQG P+S  LF   ++ +L ++  +      IGE  +
Sbjct:   10 EIQCAIKGWKPSAPGSDGLTVQAITRTRLPRN----FVQLHLLRGHVPTPWTAMRTTLIPK---DGDLENPSNWRPITIASALQRLLHRILAKRLEAAVE----LHPAQKGYARIDGTLV-NSLLLDTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRLGIDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLDELLCSLQSTPGIGGTIGEEKI 238          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. UniProt/SwissProt
Match: sp|P16423|POLR_DROME (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.239e-12
Identity = 105/422 (24.88%), Postives = 185/422 (43.84%), Query Frame = 2
Query: 4676 NTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHS-KYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKC---GYLQLPK----VHIDSEILINNTKIKKLLSKEFYQYLGV---PVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            ++SPG DGI  +    +     L   + N I+    +P S +  +T+  PK     +  D   +RPI++ SV+ +   + LA+RL   IN +      Q+G    DGC ++ +I+   L HS K+ ++C   IA LD+  AF S+ H  ++  LR  G  + F   +Q  Y    T  +     +      +GVKQG P+S ILF L ++ +L  +         +G +     A+ADD+ L A++   LQ + +  +   + +G +   +KC   G    PK    V       + +++I  L   + ++YLG+     G        DI  K     ++L  + L   Q+L A +  +  +L        +  G L K++            +R   R+ L LP    +++ +   ++GG
Sbjct:  357 SSSPGPDGITPKSAREVPSGIMLR--IMNLILWCGNLPHSIRLARTVFIPKTVTAKRPQD---FRPISVPSVLVRQLNAILATRLNSSINWDPR----QRGFLPTDGCADNATIVDLVLRHSHKHFRSC--YIANLDVSKAFDSLSHASIYDTLRAYGAPKGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLRTLPSEIGA--KVGNAITNAAAFADDLVLFAETRMGLQVLLDKTLDFLSIVGLKLNADKCFTVGIKGQPKQKCTVLEAQSFYVGSSEIPSLKRTDEWKYLGINFTATGRVRCNPAEDIGPK----LQRLTKAPLKPQQRLFALRTVLIPQLYHKLALGSVAIGVLRKTD----------KLIRYYVRRWLNLPLDVPIAFVHAPPKSGG 751          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. UniProt/SwissProt
Match: sp|P14381|YTX2_XENLA (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 2.338e-10
Identity = 64/230 (27.83%), Postives = 96/230 (41.74%), Query Frame = 2
Query: 4676 NTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWK----SFK----------TLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQK----GGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVL 5311
            N SPG+DG+               T  F +   + + PD  +    +FK           +L+  P K G    + +WRP++LLS  YK+ A  ++ RL   +    ++H  Q     G +  D     N  L   L H        LA   LD + AF  V H Y+   L+    G  F   L+ +Y+           LT  +   +GV+QGCP+S  L++LAI P L
Sbjct:  464 NKSPGLDGL---------------TIEFFQFFWDTLGPDFHRVLTEAFKKGELPLSCRRAVLSLLPKK-GDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLA--EVIHPDQSYTVPGRTIFD-----NVFLIRDLLHFARRTGLSLAFLSLDQEKAFDRVDHQYLIGTLQAYSFGPQFVGYLKTMYASAECLVKINWSLTAPLAFGRGVRQGCPLSGQLYSLAIEPFL 670          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. UniProt/SwissProt
Match: sp|P08548|LIN1_NYCCO (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.984e-10
Identity = 53/209 (25.36%), Postives = 99/209 (47.37%), Query Frame = 2
Query: 4754 LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKG---GSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDC-EPFMIGESPVK 5368
            LF  I    I+P+++      L PKP KD    +  ++RPI+L+++  K+    L +R+   I    ++H  Q G   GS+  G       ++  ++H    KN    I  +D + AF ++ H +M   L+ IG+   F  +++ +YS  +       +   + P++ G +QGCP+S +LF + +  +  A+      +   IG   +K
Sbjct:  494 LFQNIEKEGILPNTFYEANITLIPKPGKDPTRKE--NYRPISLMNIDAKILNKILTNRIQQHIK--KIIHHDQVGFIPGSQ--GWFNIRKSINV-IQHINKLKNKDHMILSIDAEKAFDNIQHPFMIRTLKKIGIEGTFLKLIEAIYSKPTANIILNGVKLKSFPLRSGTRQGCPLSPLLFNIVMEVLAIAIREEKAIKGIHIGSEEIK 695          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. TrEMBL
Match: Q7YXU7 (ORF2 (Fragment) OS=Girardia tigrina OX=6162 PE=4 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.275e-63
Identity = 144/445 (32.36%), Postives = 231/445 (51.91%), Query Frame = 2
Query: 4646 EIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSK--------YSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAV-SRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDS-EILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREI---------KTGALSKSNGNSNRSVNI-----SSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            +I   +K A  ++ G+D I Y D+ L DP G++L  +F  I+ N I P   K+ +T++ PKP K   Y D SSWRPI + S +Y++    L   L  WI  N +L   QK   + +GC +HN++L+  ++  +         +KN  L I +LD  +AFGSVP D +  + +  G+G    ++++ LY D  T  +CG     N+ + +GVKQGCP+SM+LF + IN ++ A+ +  D   + +G+  ++ILAYADDIALI+ S +DLQ++   A      +G  + P KC  + +P     +  IL+N   IK +   + Y+YLG            ++L   + +T+ +  S L   QK+ AY+ F+HS+L F  R   I         KT   + ++ +S +S+       S QL   F     LP+     +FY   + GG
Sbjct:  285 QIAKYIKFASKSAAGLDWITYEDIKLGDPSGEILQPIFEYIVQNNICPSEGKASRTIMIPKPGK-SDYSDPSSWRPITITSAVYRLLMKYLTWELYNWILLNQMLSRSQKSLGKFEGCHDHNAMLNMLIQDVRRQTNPSNPINKNKRLYIVFLDFTNAFGSVPLDTLMYVPQRFGLGTSALTLIKNLYLDNYTNVTCGESKIENVKLNKGVKQGCPLSMLLFNIFINIIIRAIEAMPDVHGYPLGDMDIRILAYADDIALISDSHKDLQEMVYKAEYIGRILGLLFNPSKCALMDIPHDKKRTPPILVNGEMIKCVGKADPYKYLGTFRSWFRKLDIKELLQMMMDETKLITESNLHPHQKIHAYETFIHSQLPFHLRHSRIPFSDFITNRKTNKTTNNSNDSEKSIQKAYDPESGQL---FLNTFALPSGCAKDFFYITKDAGG 725          

HSP 2 Score: 102.449 bits (254), Expect = 3.275e-63
Identity = 99/380 (26.05%), Postives = 166/380 (43.68%), Query Frame = 1
Query: 5926 LDEYHTQTITHFFRLLTSEC---------DYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGK-ESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCD----SYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLS--IFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHN----DCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRW 7005
            LDEY  Q+I + FRLL SE          D    +N+           G    +  +++  FN     +  H    +R + AR+ +A  +    +++   V      L +T ++   ++L     K   K +H +L      ++L + +K   S  + SA      +NK I    +    W FIHRAR   L   +F+         LCR C  + ETMSHA+ +C +  TL  ERH+      +++++S       +I    +V  L P+        IT  S  + +LV++KCP D+  +FE        KY+ +   ++ V P  +V L T + G+LGS+  + S+ L  +G  + E+  +     L NI  S  +W
Sbjct:  732 LDEYLIQSIMYIFRLLGSEDPTLNSAIKHDLISHLNLK----------GFVNINFSQAISIFNSNFTDRTDHFSHLSRTEWARLQLARKKLKSTLAIQTNVCLINGHLVLTLSLENNVLLIDSKEKGDVKKIHASLMGFLRLAHLIRLQKHGWSKLLFSATTHHEILNKRILNGHVPYKIWYFIHRARLGLLPTKLFSV------SNLCRKCGGKKETMSHALVNCPMMQTLINERHDALEISLVQILSSKF--QGTVIRQKTYVNELRPD--------ITMESDTQYYLVEVKCPFDTKMSFELRTQQTTDKYNIIIEILEDVHPGKEVRLVTFIVGTLGSWGPQNSDFLRDLGFSKDEIDQVKTRLMLQNINSSCEQW 1085          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. TrEMBL
Match: A0A4Y2Q0X5 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Araneus ventricosus OX=182803 GN=pol_1044 PE=4 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 1.767e-62
Identity = 144/424 (33.96%), Postives = 214/424 (50.47%), Query Frame = 2
Query: 4646 EIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQL----PKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENG 5905
            E+  +L +A+N++PG D + Y     L    K L   FN  +  + +P +WK   T+L PK   D   D+ ++WRPIAL + IYK+F   LA RL  W    N+L   QKG +  DG +EHN IL   LE ++  K   L +AWLD+ +AFG++PH  ++  L+  G G+ F  I++ +Y+D ST        T  I IK GVKQGCPIS +LF ++I+ +L  V     +  ++         +ADD+ LI  S EDLQ + ++     + IG    P K   L L    P    DS   +    IK +L  EF ++LG PVG  P  S Y   +      +K+ +S+L  WQK+ A K F     IFP     ++TG   K +        +   +R   +++L LP ++   Y Y  T+ G
Sbjct:   44 EVSKKLAKAENSAPGPDRLTYHHWRSLPQGHKFLATTFNVCLHFQKVPAAWKKTTTILIPKSLLD--LDNPANWRPIALSNTIYKIFTKVLAGRLQDWSTKFNVLSHCQKGFTPFDGVLEHNFILQTRLESARAHKK-DLCVAWLDVTNAFGALPHPLIYKALQAAGTGDQFIKIIKDIYTDCSTSILTNDSATSPISIKSGVKQGCPISGLLFNMSIDHILRRVQGDLTDHRILA--------FADDLCLIGDSREDLQDMLDVVFEEMSRIGLLLNPGKSFSLHLSASTPVNVPDSLFSLGPDTIKPILEFEFTKFLGKPVGFNP-VSDYSSFNNFADCAKKILDSQLSPWQKMDAMKSF-----IFPAMQFSMRTGQFKKEDWTL-----LDEAIRHAVKEILFLPERASNEYIYGHTKAG 445          

HSP 2 Score: 74.3294 bits (181), Expect = 1.767e-62
Identity = 97/402 (24.13%), Postives = 170/402 (42.29%), Query Frame = 1
Query: 5908 ANCVDL---LDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNG-----KESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKP-----SLYITTAMRGTIILT--SDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCH-AEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDS-VNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSN--------IAHSARRWHFHKTGILVDP 7038
            A CV L    +E     +   F+LLTS  +   Q+ + +L+     R+ I  P+  +  D+  G     ++ KPH +     +  AR+A      +    + ++  +  P      L I ++ R  I+ T  + LR+  S+VL         +K ++      +A +   S  I   ++ +  SE+   FIHR R N L +       G  + CR C+ A  ET+ H I  C+VH      RH+     + +    +   I+ ++     V     R D+++      K++++D+ CP ++ ++ FE+      RKY  L +     + +   E+   V G+LGS+  +    L KI + R+ LK L K C   N        I H      F  + I+ DP
Sbjct:  444 AGCVGLPISAEESDLNRVDSAFKLLTSHDEIVAQLALKNLRNSVAKRVRILNPTDDDMSDFMTGSLDIDEDDKPHSNPYSNIWTTARVA------SRRQKIQWLFSEGHPRLKFQDLIIKSSSRRKILFTIRNRLRQDRSQVLQ--------NKPDQGKAMECVAQSPISSHFIANGLY-TRFSEY--RFIHRTRLNLLPLNGLPWKDGPVKRCRRCNKANLETLPHVINHCEVHSRAWQLRHDSIQNRVVNAAENSKAEILSINK--KFVKEFNLRPDIILK--LDGKLYIIDIVCPFENRLDRFEKAKDEKRRKYQVLVDHFH--QQNITAEIIPIVVGALGSWDTENDRFLSKI-MSRSYLKKLSKLCVSDNIRWARDIYIEHVTGHRQFDVSAIIADP 821          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. TrEMBL
Match: A0A4Y2XBD8 (Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Araneus ventricosus OX=182803 GN=pol_802 PE=4 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 2.773e-62
Identity = 142/424 (33.49%), Postives = 214/424 (50.47%), Query Frame = 2
Query: 4646 EIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPK---VHIDSEIL-INNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENG 5905
            E+  +L RA+N++PG D + Y     L    K L   FN  +  + +P  W+   T+L PK       D  ++WRPIAL + IYK+F   LA RL  W    ++L   QKG +  DG +EHN IL   LE ++  K   L +AWLD+ +AFG++PH  ++  L   G G+ F  I+Q +Y+D ST        T  IPIK GVKQGCPIS +LF ++I+ +L  +     +  ++         +ADD+ LI  S EDLQ + ++     ++IG    PEK   L L     V++   +  +    IK +L  EF ++LG PVG  P  S Y   +      +K+ +S+L  WQK+ A K F     IFP     ++TG   K +        +   +R   +++L LP ++   Y Y  T+ G
Sbjct: 1108 EVSKKLARAENSAPGPDRLTYHHWRSLPQGNKFLATSFNVCLHFQKVPAEWRKTTTILIPK--SLLNLDSPANWRPIALSNTIYKIFTKVLAGRLQDWSTKFDVLSHCQKGFTPFDGVLEHNFILQTRLESARAHKK-DLCVAWLDVTNAFGALPHPLIYKALHAAGTGDQFVKIIQDIYTDCSTSILTNDSSTGPIPIKSGVKQGCPISGLLFNMSIDHILRRIQGDFTDHRILA--------FADDLCLIGDSREDLQDMLDVVYDEMSKIGLLLNPEKSFSLHLSASTPVNVPGSLFSLGPDTIKPILEYEFTKFLGKPVGFNP-VSDYSSFNSFADCAKKILDSQLSPWQKMDAMKSF-----IFPATQFSMRTGQFKKEDWTL-----LDEAIRHAVKEILFLPERAANEYIYGHTKAG 1509          

HSP 2 Score: 76.6406 bits (187), Expect = 2.773e-62
Identity = 99/402 (24.63%), Postives = 172/402 (42.79%), Query Frame = 1
Query: 5908 ANCVDL---LDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNG-----KESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSL-----YITTAMRGTIILT--SDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCH-AEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDS-VNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNI--------AHSARRWHFHKTGILVDP 7038
            A CV L    +E     +   F+LLTS  +   Q+ + +L+     R+ I  P+  +  D+ +G     ++ KPH +     +  AR+A      +    + ++  +  P L      I ++ R  I+ T  + LR+  S+VL         +K ++      +A +   S  I   ++ +  SE+   FIHRAR N L +       G  + CR C+ A  ET+ H I  C+VH      RH+     +      +   I+ V+     V     R D++I      KI+++D+ CP ++ +++FE+      RKY  L +     + +   E+   V G+LG++  +    L KI + R+ LK + K C   NI         H      F  + I+ DP
Sbjct: 1508 AGCVGLPISAEESDLNRVDSAFKLLTSHDEIVSQLALTNLRNSVAKRIRIPNPTDDDMSDFMSGSLDIDEDDKPHSNPYSNIWTTARVA------SRRQKIQWLFSEGHPQLKFQDLIIKSSSRRKILFTFRNRLRQDRSQVLQ--------NKPDQGKAMECVAQSPISSHFIANGLY-TRFSEY--RFIHRARLNLLPLNGLPWKDGPVKRCRRCNKANLETLPHVINHCEVHSRAWQLRHDSIQNRVVKAAEYSKAEILAVNR--KFVKEYNLRPDIIIK--LDGKIYIIDIVCPFENRLDSFEKAKDEKRRKYQVLVDHFH--QQNISAEIIPIVVGALGAWDTENDRFLSKI-MSRSYLKKMSKLCVSDNIRWARDIYVEHITGHRQFDVSAIIADP 1885          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. TrEMBL
Match: A0A4Y2L367 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 OS=Araneus ventricosus OX=182803 GN=PO21_39 PE=4 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.844e-61
Identity = 152/445 (34.16%), Postives = 231/445 (51.91%), Query Frame = 2
Query: 4598 CKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYL----QLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGGQIAL 5920
            C+  +  L    F+  E+  +L+ A NTSPG D I Y D   +    K L  +FN  +  + IP SWK+  T+L PK    G  +  ++WRPIAL S +YK+F  CLA+RL+ W    ++L   QKG + HDG +EHN +L   L+ ++  K   + IAWLD+ +AFGS+PH+ ++ +L   G G  FT +++ +YS++ST       LT +IPI  GVKQGCPIS I+F + I+PV+  V   +           K+LA+ADD+ L+A S E+LQ   +    +   +G    P K   L    + P    +S   I+N +I+ +   +F+++LG PVG  P      + D A+  TR L  S L  WQ++ A K F    L FP R  +           +  +   I + +R   +  L LP ++   Y Y A+   G + L
Sbjct:   58 CEDGRVPLLDTPFTVKEVKVKLQNAANTSPGPDRITYADWKTIPASVKFLVTVFNACVHFQRIPPSWKTSTTVLLPK---SGDPNIPNNWRPIALSSTMYKMFTKCLAARLSAWCERYDVLSKCQKGFTPHDGVIEHNYVLKNFLDSARRDKT-DVCIAWLDVTNAFGSIPHEAIFEMLSRSGAGLPFTELIRDIYSNSSTKILSDGGLTRDIPILSGVKQGCPISGIIFDMCIDPVIRGVQAEN--------QSHKVLAFADDLCLLANSPEELQLSLSFVNASLKRLGLALNPSKSVALYVSGRTPVGVRNSPFFIDNAQIRNIEEGDFHKFLGKPVGFNPCPDYKYLSDLAIIATR-LLESCLAPWQRIAALKTFFFPALQFPMRNAQF----------DKEKWAEIDAMIRPEIKNTLGLPERACNDYLY-ASRKVGAVGL 478          

HSP 2 Score: 59.3066 bits (142), Expect = 2.844e-61
Identity = 87/368 (23.64%), Postives = 155/368 (42.12%), Query Frame = 1
Query: 5962 FRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRK----TTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFA-KHHNKGDKRLCRLCHAED-ETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSK------ERVDLMITDLSRKKIFLVDMKCPCDS-VNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGI 7026
            F+LLTS+  +  ++ +  L      RL   +PS  +  D+  G+        R  +F  + +       +    + +   D+ P L       G + L S  RK    +    L +   DS L++ ++  V   ++ +   S  +    + +  SE  W F+H+ARTNTL +   K  +K     CR C   D ET++H +  CK        RHN       S+  KN+ L       C+L+  ++      +R DL+     R +++++D+ CP ++ +  F       + KY SL    +++    K  +   + G+LGS+  K    L K  + ++ L  L + C    I  S   +  H TG+
Sbjct:  494 FKLLTSKDPHVAELALAELLKTVKFRLRKPSPSDSDLGDFMTGE-------ARAAQFDNSNLWTCARRASARQGIRWEFVDNTPRLLF-----GDLTLKSANRKKLLFSLRDRLRLLRGDSLLARPDQGKVMEVVSQSAASSHFMANGDY-TRFSE--WRFVHKARTNTLPLNGNKPWDKTSNTACRGCDECDLETLAHVLNHCKGRSRGWQLRHNSI-----SDRVKNALLF----DGCTLISENQPIGPDGQRPDLVFR--KRNEVYIIDITCPFENRLEAFTAARNHKIEKYASLVPFFESM--GLKATIIPILVGALGSWDPKNDSFLRK-HMAKSFLHKLQRLCVSETIRWSRDIYVEHVTGV 832          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. TrEMBL
Match: A0A4Y2WJK9 (Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 OS=Araneus ventricosus OX=182803 GN=PO21_26 PE=4 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.936e-60
Identity = 152/445 (34.16%), Postives = 231/445 (51.91%), Query Frame = 2
Query: 4598 CKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQL----PKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGGQIAL 5920
            C+  +  L    F+  E+  +L+ A NTSPG D I Y D   +    K L  +FN  +  + IP SWK+  T+L PK    G  +  ++WRPIAL S +YK+F  CLA+RL+ W    ++L   QKG + HDG +EHN +L   L+ ++  K   + IAWLD+ +AFGS+PHD ++ +L   G G  FT +++ +YS+++T       LT +IPI  GVKQGCPIS I+F + I+PV+  V   +           K+LA+ADD+ L+A S E+LQ   +    +   +G    P K   L +    P    +S   I+N +I+ +   +F+++LG PVG  P      + D A+  TR L  S L  WQ++ A K F    L FP R  +           +  +   I + +R   +  L LP ++   Y Y A+   G + L
Sbjct: 1077 CEEGRVPLLDTPFTVKEVKIKLQNAANTSPGPDRITYADWKTIPASVKFLVTVFNACVHFQRIPPSWKTSTTVLLPK---SGDANVPNNWRPIALSSTMYKMFTKCLAARLSAWCERYDVLSKCQKGFTPHDGVIEHNYVLKNFLDSARRDKT-DVCIAWLDVTNAFGSIPHDAIFEMLSRSGAGLPFTELIRDIYSNSTTKILSDGGLTRDIPILSGVKQGCPISGIIFDMCIDPVIRGVQAEN--------QSHKVLAFADDLCLLANSPEELQLSLSFVNASLKRLGLSLNPSKSVALHVSGRTPVGVRNSPFFIDNAQIRNIAEGDFHKFLGKPVGFNPCPEYKYLSDLAIIATR-LLESCLAPWQRIAALKTFFFPALQFPMRNAQF----------DKEKWAEIDAMIRPEIKNTLGLPERACNDYLY-ASRKVGAVGL 1497          

HSP 2 Score: 53.9138 bits (128), Expect = 1.936e-60
Identity = 85/368 (23.10%), Postives = 154/368 (41.85%), Query Frame = 1
Query: 5962 FRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRK----TTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFA-KHHNKGDKRLCRLCHAED-ETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSK------ERVDLMITDLSRKKIFLVDMKCPCDS-VNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGI 7026
            F+LLTS+  +   + +  L      RL   +PS  +  ++ +G+        R  +F  + +       +    + +   D+ P L       G + L S  R+    +    L +   DS L++ ++  V   ++ +   S  +    + +  SE  W F+H+ARTNTL +   K  +K     CR C   D ET++H +  CK        RHN       S+  KN+ L       C+L+  ++      +R DL+     R +++++D+ CP ++ +  F       + KY SL    + +    K  +   + G+LGS+  K    L K  + ++ L  L + C    I  S   +  H TG+
Sbjct: 1513 FKLLTSKDPHVADLALAELLKTVKFRLRKPSPSDSDLGEFMSGE-------ARAAQFDNSNLWTCARRASARQGIRWEFVDNSPRLLF-----GDLTLKSSNRRKLLFSLRDRLRLLRGDSLLARPDQGKVMEVVSQSAASSHFMANGDY-TRFSE--WRFVHKARTNTLPLNGNKPWDKTSNTACRGCDECDLETLAHVLNHCKGRSRGWQLRHNS-----ISDRVKNALLF----DGCTLISENQPIGPDGQRPDLVFR--KRNEVYIIDITCPFENRLEAFTAARNHKIEKYASLVPFFENM--GLKATIVPILVGALGSWDPKNDSFLRK-HMAKSFLHKLQRLCVSETIRWSRDIYVEHVTGV 1851          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Cavefish
Match: ENSAMXT00000034831.1 (pep primary_assembly:Astyanax_mexicanus-2.0:3:16211297:16215948:1 gene:ENSAMXG00000034228.1 transcript:ENSAMXT00000034831.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 110.538 bits (275), Expect = 1.459e-23
Identity = 67/216 (31.02%), Postives = 111/216 (51.39%), Query Frame = 2
Query: 4676 NTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIG-QKGG-SRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEA 5317
             ++PG +G+ YR         K L  L   +    IIP  W     +L PK       D    +RPI+LL+V  K+F S +A RL  ++  NNL+    QK G +   GC+EHNS++   ++ ++  K   L + +LD+ +AFGSVPH  +W    F  V E+ + +++  + D    +S G  +T    ++ G+  GC IS++ F +A+  ++ A
Sbjct:  387 GSAPGPNGVPYRSYKSAPDVLKFLWKLMAIVWKKGIIPKEWHRAGGVLIPKEKDSVAIDQ---FRPISLLNVEGKIFFSVVARRLATYLKRNNLIDTSVQKAGIAGFSGCIEHNSMIWHQIQTARAEKK-DLHVVFLDLANAFGSVPHALLWKAFNFFRVPEEISRLVKAYFEDIQFCFSVGECVTSWQRLEIGIMAGCTISLLAFTMAMEVIIRA 598          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Cavefish
Match: ENSAMXT00000034560.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000712.1:195631:202616:-1 gene:ENSAMXG00000042811.1 transcript:ENSAMXT00000034560.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 104.375 bits (259), Expect = 1.397e-21
Identity = 113/427 (26.46%), Postives = 197/427 (46.14%), Query Frame = 2
Query: 4646 EIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPK------VHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            E + Q+KR  NT+PG D I  + L   DP G+ L  L+   +V  ++P ++K  +T L PK       ++V +WRPI + S+I ++F+  +A RL      N      Q+G     GC E+  +L   + H K  ++  LA+ ++D   AF S+ H+++ S L    + +    ++Q  Y D  T        +P+I +K GVKQG  +S ILF LA++P+++++       + IG S V  LA+ADD+ L++ S + ++    +        G   +  KC    + +      V+  S   +    I  +   E  +YLGV V      +  D+  +      ++  + L  +QK+     F   RLI+     ++K   L+  +G   R+V          +  L LP  +     Y+  ++GG
Sbjct:  433 ENLGQIKR--NTAPGPDRITRQMLSDWDPSGEKLERLYTAWMVAGVVPKAFKECRTTLIPKSTSKEALEEVGNWRPITIGSLILRLFSKIMAERLARACPINPR----QRGFISAPGCAENLKVLQGLIGHCKKERS-QLAVVFVDFARAFDSISHEHILSALGQRQLDQHVIKLIQSAYVDCVTRIIMDGAKSPDILMKVGVKQGDSMSPILFNLAMDPLIQSLENLG-SGYKIGGSSVTTLAFADDLVLLSSSWDGMRSNIALLDEFCERTGLRVQSRKCHGFLIRRGATSYTVNDCSPWDLGGEPIHLIEPHEVEKYLGVKVNPWVGITKPDLNSQLGEWVTRIGGAPLKPYQKVGLLNDFAIPRLIYLADHCDLKGVTLATLDGTIRRAV----------KGWLHLPLSTCGGLLYSRVQDGG 841          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Cavefish
Match: ENSAMXT00000046127.1 (pep primary_assembly:Astyanax_mexicanus-2.0:7:16384999:16389616:1 gene:ENSAMXG00000035718.1 transcript:ENSAMXT00000046127.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 90.5077 bits (223), Expect = 7.436e-18
Identity = 55/169 (32.54%), Postives = 89/169 (52.66%), Query Frame = 2
Query: 4835 KDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWIN--TNNLLHIGQKGGSRHDG-CVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSD 5332
            K G   ++++WR + L+++ YK+FA  L +RL   ++   N     G KG S  D  C+    I +  L  S +       I  LD K AF S+  +Y+W++L      + F  +++LLY  ++        LT  I I +GVKQGCP+S  L+ LAINP+L ++ + +
Sbjct:  144 KKGDEYELNNWRQVTLMNIEYKIFAKVLMNRLEKILDKIINEEQTCGIKGRSMWDNLCIIRELITNKHLNESGF------YILALDKKKAFDSISREYLWAVLERYNFPDVFIKMIKLLYLKSTVQVKVNGKLTEKIDICRGVKQGCPLSAALYVLAINPLLTSLKKEE 306          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Cavefish
Match: ENSAMXT00000048276.1 (pep primary_assembly:Astyanax_mexicanus-2.0:17:7857318:7859867:1 gene:ENSAMXG00000040121.1 transcript:ENSAMXT00000048276.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 89.7373 bits (221), Expect = 2.685e-17
Identity = 57/165 (34.55%), Postives = 91/165 (55.15%), Query Frame = 2
Query: 4826 KPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAV 5320
            KP KD    + SS+RP++LL+   KVFA  LA RL   I   +L+H  Q G  R     ++   L   LE +  S+    A+  LD + AF  +   ++W++L+  G G  F  ++  LY++ S   S G +++    +++G +QGCP+S  LFALA+ P+ +AV
Sbjct:  520 KPGKDST--ECSSYRPLSLLNTDVKVFAKVLAKRLDSVIP--DLIHSDQTGFIRSRLASDNLRRLFHILEFAP-SQMLGSAVLSLDAEKAFDRLEWPFLWAVLKRFGFGSAFIHMIFTLYTNPSACVSTGHMISAKFLLERGTRQGCPLSPFLFALAVEPLAQAV 679          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Cavefish
Match: ENSAMXT00000039514.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001049.1:157646:166348:-1 gene:ENSAMXG00000041595.1 transcript:ENSAMXT00000039514.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 88.9669 bits (219), Expect = 7.360e-17
Identity = 65/222 (29.28%), Postives = 112/222 (50.45%), Query Frame = 2
Query: 4682 SPGIDGIQYRDXXXXXXXXXXXTF-LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPF 5344
            +PGIDGI                  +F  + +   +P S  S + +L+  P K G    + +WRP++LL   YK+ A CLA+RL   ++T  ++H  Q         +++  ++   ++ S     C + +  +D + AF  V H Y++  L   GV   F S L +LYS+ S     G  L+  + +++G++QGCP+S  L++LAI P+L  + R+D + F
Sbjct: 1223 APGIDGIPAEFFKSFWDFFGEDLLEVFRAVFIEGRLPVS--SSRAVLSLLPKK-GDLGLLKNWRPVSLLCTDYKILAKCLANRLKLCLHT--IIHPNQSYCIPSRTIMDNLFLVRDVIDLSNMDV-CEIGLLTIDQEKAFDRVDHLYLFKTLEAFGVQNVFLSWLNVLYSEASFILKVGGGLSEPLMMRRGIRQGCPLSGQLYSLAIEPLLSRL-RADMQGF 1437          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Medaka
Match: ENSORLT00000036683.1 (pep primary_assembly:ASM223467v1:19:23029986:23032853:-1 gene:ENSORLG00000028041.1 transcript:ENSORLT00000036683.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 91.2781 bits (225), Expect = 1.140e-17
Identity = 65/219 (29.68%), Postives = 108/219 (49.32%), Query Frame = 2
Query: 4646 EIMFQLKRADN-TSPGIDGIQYRDXXXXXXXXXXXTF-LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALA 5296
            E++  LK+ +N  SPG DG+                  ++ + IV + +  + K     L PKPNKD     + +WRPI LL+V YK+ A   A RL    N + ++   Q G  ++     +  ++   L++S++  +  L I +LD   AF +V H ++++ L+  G GE+F SI ++ Y D S+     P  +    I + V+QGCPIS   F + 
Sbjct:  174 ELLNALKKMNNGKSPGNDGLSKEFYCHFWDVINPHLMEMYKECIVQQEMTATMKQGLITLIPKPNKDPVM--IENWRPITLLNVDYKILALVYAQRLKS--NLHEIISETQSGFMKNRHISNNIRLILDLLDYSEHIDSEAL-ILFLDFYKAFDTVEHPFLYNALKLFGFGENFISIAKMFYKDISSSILLYPNTSQRFSINRSVRQGCPISPFFFLIV 387          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Medaka
Match: ENSORLT00000028058.1 (pep primary_assembly:ASM223467v1:18:21516917:21520645:1 gene:ENSORLG00000027382.1 transcript:ENSORLT00000028058.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 90.5077 bits (223), Expect = 1.989e-17
Identity = 65/219 (29.68%), Postives = 108/219 (49.32%), Query Frame = 2
Query: 4646 EIMFQLKRADN-TSPGIDGIQYRDXXXXXXXXXXXTF-LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALA 5296
            E++  LK+ +N  SPG DG+                  ++ + IV + +  + K     L PKPNKD     + +WRPI LL+V YK+ A   A RL    N + ++   Q G  ++     +  ++   L++S++  +  L I +LD   AF +V H ++++ L+  G GE+F SI ++ Y D S+     P  +    I + V+QGCPIS   F + 
Sbjct:  461 ELLNALKKMNNGKSPGNDGLSKEFYCHFWDVINPHLMEMYKECIVQQEMTATMKQGLITLIPKPNKDPVM--IENWRPITLLNVDYKILALVYAQRLKS--NLHEIISETQSGFMKNRHISNNIRLILDLLDYSEHIDSEAL-ILFLDFYKAFDTVEHPFLYNALKLFGFGENFISIAKMFYKDISSSILLYPNTSQRFSINRSVRQGCPISPFFFLIV 674          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Medaka
Match: ENSORLT00000039015.1 (pep primary_assembly:ASM223467v1:1:17620203:17622875:-1 gene:ENSORLG00000024714.1 transcript:ENSORLT00000039015.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 88.1965 bits (217), Expect = 9.829e-17
Identity = 62/211 (29.38%), Postives = 102/211 (48.34%), Query Frame = 2
Query: 4682 SPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKG--GSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPV 5308
            SPG DG               +  ++N+  +   +P++       L  K +KD      SS+RPI+LL+V +K+ +  LASRL + +    ++ + + G    RH     HN+     + HS      P  I  LD + AF  V   +++  +   G+G DF   ++LLYS     +     L+P  P+++G +QGCP+S  LFA+AI P+
Sbjct:  174 SPGPDGFSVEYYKANSDLLAPVLEMYNEAFLKSSLPNTLSEATISLILKKDKDPLL--CSSYRPISLLNVDFKILSKVLASRLQHVLP--KIISLDKTGCMAGRHS---YHNTRRLLNIIHSPCCL-APEVIVSLDAEKAFDRVEWTFLYETMSRFGLGNDFIEWVKLLYSSPMASFRTNNTLSPPFPLRRGTRQGCPLSPALFAIAIEPL 376          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Medaka
Match: ENSORLT00000034825.1 (pep primary_assembly:ASM223467v1:18:2674911:2678633:-1 gene:ENSORLG00000022021.1 transcript:ENSORLT00000034825.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 87.0409 bits (214), Expect = 2.458e-16
Identity = 95/365 (26.03%), Postives = 159/365 (43.56%), Query Frame = 2
Query: 4670 ADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVN-KIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSK--NCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEE----PDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFP 5743
            A + SPG DG+            K    L  K I    I+P + K     L PKP KD +  D  + RPI+LL+  YK+  +  ASRL      N ++   Q G  +  G   HN+I    L+   Y++       I +LD   AF +V H +M+  L   G G +F S +Q +Y+DT++       ++P   I +G+KQGCPIS +LF  A   +   +  S      +    + +   ADD     K    +  I       +   G +    KC   +L  VH   + +I+N  ++ ++     +YLGV + ++     + + +  L+K   +    +  ++    ++   K+   SR I+P
Sbjct:  467 ALDKSPGSDGLTINFYRHFWEHLKEQFLLVIKEISELNILPTTMKQGVITLIPKPGKDARLID--NLRPISLLNSDYKILTNIYASRLK--TGLNQIISDTQSGFLK--GRSIHNNI-RLVLDLIDYNQLIEDDGFILFLDFFKAFDTVEHKFMFQTLEIFGFGPNFISFVQTIYNDTNSVIILPNGISPRFLINKGIKQGCPISPLLFITATEMLSILIKNSGFSKLSVLGEQLLMTQLADDTPTFMKDSHQIPDIIQTVDFFSKASGLKLNLSKC---ELLPVHHSDQSVIHNISVRTVV-----KYLGVHITKDSKTMEEMNLWKTLEKCKVNLNMWSQRDISILGRVFLTKLECLSRFIYP 816          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Medaka
Match: ENSORLT00000040357.1 (pep primary_assembly:ASM223467v1:14:28942701:28945517:1 gene:ENSORLG00000024817.1 transcript:ENSORLT00000040357.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 86.6557 bits (213), Expect = 2.569e-16
Identity = 62/210 (29.52%), Postives = 103/210 (49.05%), Query Frame = 2
Query: 4670 ADNTSPGIDGIQYRDXXXXXXXXXXXTF-LFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALA 5296
            A   SPG DGI          + + + F  FN+ I  +++  + K     L PKP KD    D  +WRPI LL   YK+ A   A+RL   I+   ++   Q    +      H  ++   L++++      L I +LD   AF S+ H ++++ L+  G    F +I+++ Y D S+  +     + N P+ +GV+QGCPIS +LF ++
Sbjct:  477 ASGKSPGPDGITAEFYKHFWTDIREMLFEAFNECIDEQMLSPTMKRGIISLLPKPGKDVLLID--NWRPITLLCCDYKILAHIYANRLKSGIS--QIIDESQSAFIKGRHIHHHTRLILDILDYNQIIPQDSL-ILYLDFFKAFDSLEHAFLFNALKTFGFESKFCNIIKMFYKDISSNIAINRGFSNNFPVNRGVRQGCPISPLLFIIS 681          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Planmine SMEST
Match: SMESG000021486.1 (SMESG000021486.1)

HSP 1 Score: 2693.69 bits (6981), Expect = 0.000e+0
Identity = 1371/1816 (75.50%), Postives = 1527/1816 (84.09%), Query Frame = 2
Query:  461 PKFENHKLSNIKLDNLNTTEKFSSVNFNKTDLKNSKTLRKLINSNSNIQRKDLPYFKSRNLEKTKINYQCFSRTLNKSEKLQLFRAFPNLNKKINTKESVENFQNLNNELIRINPSKNPLKIDGFVKFFYRNGNICVSINFSVNNKTEQLVKETILKTSIIDSNIITSYNNRLKLTGASTAIKSFLFVLSTKLSETATISNAKVRGEQINNCLNLLKKQKALPDYLMKSHIKYHNGDFVMLDLLSNSDLNVKKAILSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKTHIDKISEHLQTESESDIMFNLGLLDFIQMSKTDTLFHSLLTQPNSPSKLIDIIFYINYLNLKGTLAYISNATFDEYVKNYLRNCFLMHSITNIESSHSLGRDNIETWGPEMINMIPSSSYYFANCKERLLKLRQLNLSREIDKIHNIISPNTISEINNFLETVEVALPKKVDQLKALSKLGNKINEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQTVNTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKVDSETLKRKLSVDIDDNQSTTIVTNDIQQDVPQPKIIKKTRRNTVKPK*RCXXXXXXXXXXXXKETDADXXXXXXXXXXXXXXXXXHDPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISGGGLPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            P+FEN KLSNIKLDNLNTT+KFSSVNFNKTDLKNSKTLRKL N+NSNIQRK+ PYFKSRNLEKTK NYQCFSRTLNKSEKLQLFR+FPNLNKKI TKESVE FQNLNNELIRI PSKNPLKIDGF+KFFYRNGNICVSINFSVNNKTE LVK+TILKTSIIDSNIITSYNNRLK TGASTAIK FLFVLS KLSETATISNAKVRGEQINN LNLLKKQ+ALPDYLMKSHIKYH+GDFVMLDLLS+SDLNV  A LSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIK +  K S+H Q E ESDIMFN+GLL+F +M   DT   SL +QP S  K+IDIIF++NYL LKG L + SN ++ +YV NY+RNC  ++SI++IE+ ++L  D+IE W P ++ MIP  SY+ ++CKERLL+LRQ  LS EID++HNIISP TI  IN+FL  ++   P+K  QLKAL  L N IN    ES+   I KAKRFL+F+IRDKK  L+ +++ +RI  +C KIC+ NM+  I  II  L   +T     Q  + S S T+ N ++SV+      S  + D    E+    +   +KR+L VDID+ +S       I   + +  +I +                         ETDADST   I  N         DP IWFTD++ID +L+NHI + +F SI CFIVEIL  N  +D+FPIPE VFKAQ+ILCPLNI+  HWILFVYCK+SL SYF+DPI   RH F NKT AL++TMALN+LF+LKAAMTFHPH++F YQ N+YDCGP+ICAYAM ISG WQSFP+ F++IIRKEVHQ +LF QQKD K+SGGGLPKFMEIIKRNGV+K SSA+QAFLLKQNSC+SSLL E+FK + NTTVLSPELT  ++AQN  +IRENVTF+QF+GI+H+IS++PND NW L++FSLV G SYIFNF +R +TERLI IGENMT+YLNKF IS++KV F  +HNI+H SIT DD  LFASAFI L+E LIF  Q+S T  SE L S KI+QANEIC NLN +N KI EEIT+KYF  LKL+ NFMLLN TMC+AILDDCT++L ++LNYE +IKAQVIFAI+APPK+RE LLIIDY TDEYYI+NPTTL  TE+   +C+  RNK+NEIKETPGRV+N+G  P+DIRGSGLVSK+LICAFIK+Y NDLPL+NLNLREIG  ISSLLP+I+E KK   S  TK  KI K NLNLE RK+KI  L+  V +  VN+IID+I  QFP+R+K+ HKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPL FCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGN+NRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATE GG
Sbjct: 4054 PEFENDKLSNIKLDNLNTTKKFSSVNFNKTDLKNSKTLRKLKNNNSNIQRKNSPYFKSRNLEKTKFNYQCFSRTLNKSEKLQLFRSFPNLNKKIKTKESVEKFQNLNNELIRITPSKNPLKIDGFLKFFYRNGNICVSINFSVNNKTEPLVKKTILKTSIIDSNIITSYNNRLKFTGASTAIKRFLFVLSNKLSETATISNAKVRGEQINNTLNLLKKQRALPDYLMKSHIKYHDGDFVMLDLLSDSDLNVGNATLSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERLLRLRQWKLSSEIDRLHNIISPETIKHINSFLSEIDKVYPQKATQLKALQNLSNNINAIKSESDDETIAKAKRFLFFVIRDKKKFLLGSKYSYRIPLHCRKICTTNMTTHIFSIIQSLLLTLTVSDSEQIADRSDSITLVNTTQSVEINPGTQSGSIVDISVVETG-STEHARVKRRLEVDIDEVESI------IHTTISKSALISE-------------------------ETDADSTIKIIEINKPLNESD-RDPTIWFTDDDIDLYLKNHISSLEFASINCFIVEILRTNPGEDLFPIPEKVFKAQIILCPLNIDKTHWILFVYCKNSLTSYFIDPILQYRHRFVNKTYALQVTMALNQLFNLKAAMTFHPHENFLYQENSYDCGPYICAYAMMISGVWQSFPDHFIDIIRKEVHQLQLFCQQKDQKVSGGGLPKFMEIIKRNGVRKTSSATQAFLLKQNSCISSLLDEYFKTRTNTTVLSPELTMNIVAQNLTFIRENVTFRQFTGIDHIISIVPNDSNWSLFVFSLVLGNSYIFNFHDRIVTERLIAIGENMTEYLNKFIISNRKVIFISEHNIEHASITSDDSLLFASAFIILIESLIFSKQVSHTRTSEFLKSVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISSLLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIIDIIVRQFPDRVKSKHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGG 5836          

HSP 2 Score: 2615.11 bits (6777), Expect = 0.000e+0
Identity = 1345/1819 (73.94%), Postives = 1498/1819 (82.35%), Query Frame = 2
Query:  461 PKFENHKLSNIKLDNLNTTEKFSSVNFNKTDLKNSKTLRKLINSNSNIQRKDLPYFKSRNLEKTKINYQCFSRTLNKSEKLQLFRAFPNLNKKINTKESVENFQNLNNELIRINPSKNPLKIDGFVKFFYRNGNICVSINFSVNNKTEQLVKETILKTSIIDSNIITSYNNRLKLTGASTAIKSFLFVLSTKLSETATISNAKVRGEQINNCLNLLKKQKALPDYLMKSHIKYHNGDFVMLDLLSNSDLNVKKAILSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKTHIDKISEHLQTESESDIMFNLGLLDFIQMSKTDTLFHSLLTQPNSPSKLIDIIFYINYLNLKGTLAYISNATFDEYVKNYLRNCFLMHSITNIESSHSLGRDNIETWGPEMINMIPSSSYYFANCKERLLKLRQLNLSREIDKIHNIISPNTISEINNFLETVEVALPKKVDQLKALSKLGNKINEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQTVNTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKVDSETLKRKLSVDIDDNQSTTIVTNDIQQD-VPQPKIIKKTRRNTVKPK*RCXXXXXXXXXXXXKETDADXXXXXXXXXXXXXXXXXHDPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISGGGLPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVIS--VIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            P+FEN KLSNIKLDNLNTT+KFSSVNFNKTDLKNSKTLRKL N+NSNIQRK+ PYFKSRNLEKTK NYQCFSRTLNKSEKLQLFR+FPNLNKKI TKESVE FQNLNNELIRI PSKNPLKIDGF+KFFYRNGNICVSINFSVNNK E LVK+TILKTSIIDSNIITSYNNRLK TGASTAIK FLFVLS KLSETATISNAK               Q+ALPDYLMKSHIKYH+GDFVMLDLLS+SDLNV  A LSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIK +  K S+H Q E ESDIMFN+GLL+F +M   DT   SL +QP S  K+IDIIF++NYL LKG L + SN ++ +YV NY+RNC  ++SI++IE+ ++L  D+IE W P ++ MIP  SY+ ++CKERLL+LRQ  LS EID++HNIISP TI  IN+FL  ++   P+K  QLKAL  L N IN    ES+   I KAKRFL+F+IRDKK  L+ +++ +RI  +C KIC+ NM+  I  II  L   +T     Q  + S S T+ N ++SV+      S  + D    E+    +   +KR+L VDID+ +S    T+  QQ+ + +  +I K                         ETDADST   I  N         DP IWFTD++ID +L+NHI + +F SI CFIVEIL  N  +D+FPIPE VFKAQ+ILCPLNI+  HWILFVYCK+SL SYF+DPI   RH F NKT AL++TMALN+LF+LKAAMTFHPH++F YQ N+YDCGP+ICAYAM ISG WQSFP+ F++IIRKEVHQ +LF QQKD K+SGGGLPKFMEIIKRNGV+K SSA+QAFLLKQNSC+SSLL E+FK + NTTVLSPELT  ++AQ                I H +   ++PND NW L++FSLV G SYIFNF +R +TERLI IGENMT+YLNKF IS++KV F  +HNI+H SIT DD  LFASAFI L+E LIF  Q+S T  SE L S KI+QANEIC NLN +N KI EEIT+KYF  LKL+ NFMLLN TMC+AILDDCT++L ++LNYE +IKAQVIFAI+APPK+RE LLIIDY TDEYYI+NPTTL  TE+   +C+  RNK+NEIKETPGRV+N+G  P+DIRGSGLVSK+LICAFIK+Y NDLPL+NLNLREIG  ISSLLP+I+E KK   S  TK  KI K NLNLE RK+KI  L+  V +  VN+IID+I  QFP+R+K+ HKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPF GNWNNPL FCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGN+NRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATE GG
Sbjct: 1720 PEFENDKLSNIKLDNLNTTKKFSSVNFNKTDLKNSKTLRKLKNNNSNIQRKNSPYFKSRNLEKTKFNYQCFSRTLNKSEKLQLFRSFPNLNKKIKTKESVEKFQNLNNELIRITPSKNPLKIDGFLKFFYRNGNICVSINFSVNNKMEPLVKKTILKTSIIDSNIITSYNNRLKFTGASTAIKRFLFVLSNKLSETATISNAK---------------QRALPDYLMKSHIKYHDGDFVMLDLLSDSDLNVGNATLSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERLLRLRQWKLSSEIDRLHNIISPETIKHINSFLSEIDKVYPQKATQLKALQNLSNNINAIKSESDDETIAKAKRFLFFVIRDKKKFLLGSKYSYRIPLHCRKICTTNMTTHIFSIIQSLLLTLTVSDSEQIADRSDSITLVNTTQSVEINPGTQSGSIVDISVVETG-STEHARVKRRLEVDIDEVESIIHTTSGTQQNHISKSALISK-------------------------ETDADSTIKIIEINKPLNESD-RDPTIWFTDDDIDLYLKNHISSLEFASINCFIVEILRTNPGEDLFPIPEKVFKAQIILCPLNIDKTHWILFVYCKNSLTSYFIDPILQYRHRFVNKTYALQVTMALNQLFNLKAAMTFHPHENFLYQENSYDCGPYICAYAMMISGVWQSFPDHFIDIIRKEVHQLQLFCQQKDQKVSGGGLPKFMEIIKRNGVRKTSSATQAFLLKQNSCISSLLDEYFKTRTNTTVLSPELTMNIVAQ----------------ISHSLEKIIVPNDSNWSLFVFSLVLGNSYIFNFHDRIVTERLIAIGENMTEYLNKFIISNRKVIFISEHNIEHASITSDDSLLFASAFIILIESLIFSKQVSHTRTSEFLKSVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISSLLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIIDIIVRQFPDRVKSKHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFQGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGG 3480          

HSP 3 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMYLFKN 7062
            ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMYLFKN
Sbjct: 5837 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMYLFKN 6221          

HSP 4 Score: 792.341 bits (2045), Expect = 0.000e+0
Identity = 380/381 (99.74%), Postives = 381/381 (100.00%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMY 7050
            ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEK+Y
Sbjct: 3481 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKIY 3861          

HSP 5 Score: 442.195 bits (1136), Expect = 0.000e+0
Identity = 216/364 (59.34%), Postives = 269/364 (73.90%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSAR 6999
            A C+DLLDEYH QTI +FFRLLTS C Y++ IN  SL  VT PRLGIK P+L +S +W NGKESK +HSGRKTRF R R ++ +F + HNI + F +    PS+ ITT++ GT I+   LRKT SK+LH AL DSYLSKWE S  SN + SA+KL P +NK IFRS+L++F W FIHRARTNTLS FAK H  G+ RLCR C +EDET+ H +Q+CK++ +L   RHN CL  I  ++ K+  L+VVVDH CSLVP S ERVDL+IT+  +K I LVDMKCP DSV+NF+ VD LNL KY  LK  IQAVKPD+KVEL TC+ GSLGS   KT ++L+K+GV+   +  L+KECA+SNIAHSA+
Sbjct: 1162 AGCIDLLDEYHAQTIVYFFRLLTSTCGYSKTINTFSLLSVTSPRLGIKNPTLSQSFEWINGKESKLNHSGRKTRFHRLRTSIEYFSRVHNIKLLFEIFKQNPSIRITTSLTGTRIILPKLRKTLSKILHSALQDSYLSKWEMSNHSNLLVSAIKLCPLVNKLIFRSDLTDFEWKFIHRARTNTLSTFAKPHKAGEDRLCRRCKSEDETILHVLQTCKINQSLATNRHNACLIKIKDSI-KDPELLVVVDHKCSLVPTSSERVDLIITNTEKKTILLVDMKCPIDSVSNFQLVDNLNLEKYAKLKLDIQAVKPDYKVELHTCIMGSLGSIESKTEDLLLKMGVQPNRIIGLMKECAISNIAHSAK 1524          

HSP 6 Score: 340.502 bits (872), Expect = 0.000e+0
Identity = 173/261 (66.28%), Postives = 212/261 (81.23%), Query Frame = 2
Query: 5126 SLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            +LL+ + V  +F +ILQLLY+DTS+FY C  + TP+IPIK+GVKQGCPISMILFA+AINPVLEA+S S+  PFMIG S V++LAYADDIALIA +  DLQ + ++AV TA  IGFEYRPEKC Y+Q PKV   SEI++NN  IKKL S EFYQYLGVP+G+  DQSPY+I+ K + DT+K+A+S L GWQKLKAYKIF+HSRLIFPFRTREIKT +L+  + NS  +VN +SQLRG  RK+L LPN SE+SYFYN+TENGG
Sbjct:  901 TLLKHMNVSAEFVNILQLLYTDTSSFYQCNQMQTPDIPIKKGVKQGCPISMILFAIAINPVLEAISLSNTTPFMIGTSSVQVLAYADDIALIATNSSDLQTLFDLAVNTANMIGFEYRPEKCAYIQYPKVETVSEIIVNNVLIKKLASNEFYQYLGVPIGDNNDQSPYEIVSKVIEDTKKIAHSNLYGWQKLKAYKIFLHSRLIFPFRTREIKTSSLADPSRNSRINVNNTSQLRGHLRKILNLPNHSEISYFYNSTENGG 1161          

HSP 7 Score: 598.201 bits (1541), Expect = 1.231e-172
Identity = 361/931 (38.78%), Postives = 546/931 (58.65%), Query Frame = 2
Query: 1964 INEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQTV--NTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKV---------DSETLKRKLSVDIDDNQSTTIVTND---IQQDVPQPKIIKKTRRNTVKPK*RCXXXXXXXXXXXXKETDADXXXXXXXXXXXXXXXXXHDPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISG---GGLPKFMEIIKRNGVKKISSASQA--------FLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPN----RIKTTHKPYLG-NKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLK 4666
            IN+  I  +  D+ K+KRF+YF++RD K  L+ N+  FR+   C+K C++ MS  I+ II  L P + +VKD   +  +  +   +EN+ +   P++      +      E  + V         ++  L     V+ D N+S    +N    I +++  P   +  +RNTVK +               K T  +                  DP+IWF+D +ID +LE HI N     IKCFIV ILC+N+++++  IP ++  A+++ CPLNINN+HWILFVYCK S  SYF+DPI  NR++  NK +ALKI +ALN  F+LK A++++PH + +YQNNN+DCGPF CAYA+ IS +  +FP+ F++ IR++VH+ ++       +I G   GG    M++   N  K I+    +         L  Q  CVSS++ ++++N    +VLS ELT  +IAQNN +I +NVTFKQF GI+H++ VIP   +W L+++S+    S+IF+F  RT+ +RLI IG  +TDYLN+F + ++ V F  +H+I H +    D   FAS FI L E L++E  +    + +SL+  K +   EI   LNL+N KIT++I  +YF  LKL D+++LLN T+C AI DDCTQY+ ++LN EC++KA VIFAI++PPK  E LL+IDY+T+E+Y L+P T          C ++  K+NE++E+ GR +  G   HDIRGSGL+SK+LICAFI++Y  D  L N+NL EIG  ++SL+P+++     +   + K    N   LNL+ RK KI  L+ K+ + +V++II  I    P     + K   +PYLG N  +P+K N      +F+T+MK TV ++ N+ +V I P FQ+I+ NF         W+N LKF K S + L L   S+ EI+  L+
Sbjct:    4 INDEQIIDDTYDV-KSKRFIYFLLRDSKKYLIRNQ-TFRLFETCNKYCTSEMSQQISLIITKLKPIVINVKDVDLIEQDCDLDKPIENI-DITKPIVIEEIHCMKCNSILEKCILVREGMNVNICENCLLDAISVVEPDSNESNQTNSNHDSPITENIINPPTKRTGQRNTVKKQ-----------PSKPKSTICNKYLTIDN----------RDPEIWFSDNDIDWYLETHIDNPMHGYIKCFIVNILCSNIQEEVVAIPRSISNAEMVFCPLNINNSHWILFVYCKKSHSSYFIDPILKNRNNLINKQMALKINIALNRFFNLKIAVSYNPHKNLQYQNNNFDCGPFTCAYAVIISKDLDNFPDGFIDEIRRDVHRNQM-------EIVGNLIGGAKTKMDMSSFNFKKAIAKTKYSNNNPNTSNILKSQMPCVSSIICKYYENNCKVSVLSAELTLNLIAQNNSFIADNVTFKQFKGIDHILCVIPKFNDWCLFIYSIKLKHSHIFDFNYRTIDDRLIEIGVKITDYLNQFCL-NRNVKFLANHHISHSTFLSYDTQYFASHFIVLFEKLVYEIHLDCDKVYDSLSKIKTETCIEISPGLNLINGKITDKIIFEYFNKLKLSDDYILLNKTLCVAISDDCTQYMKDFLNIECMMKANVIFAIISPPKVHELLLVIDYSTEEHYYLSPVTTDLNVVSQHFCYNILIKINELRESKGRAMKTGHCRHDIRGSGLLSKILICAFIRNYALDYSLENINLHEIGKIVNSLVPIVDGSDNVKYEKREKLKAANTLKLNLKQRKEKINQLLIKLSDSDVDEIICTILTNIPRLENLQKKEFREPYLGKNHNKPKKFNNP---AEFLTNMKTTVYRILNDQSVKIEPPFQEIINNFTHPDVVPECWDNVLKFSKISDELLELTYISSEEILSNLQ 899          

HSP 8 Score: 56.6102 bits (135), Expect = 3.539e-7
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  192 NGNDFEYKLFILNEKSAEESIKYKDYXXXXXXXXXXXXXXXXXSEKSADTQGCDLEA*TYPQAVFWALDNGQS 410
            NGND E K   +N    +ES  YKD F   N  +  IFI++NFSEKSAD QGCD EA T  +AVFWA++NGQS
Sbjct: 1631 NGNDLENKTPKMNGNRTKESFIYKD-FFNKNNLKNNIFIDKNFSEKSADMQGCDSEARTSSRAVFWAVNNGQS 1702          

HSP 9 Score: 56.6102 bits (135), Expect = 3.539e-7
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  192 NGNDFEYKLFILNEKSAEESIKYKDYXXXXXXXXXXXXXXXXXSEKSADTQGCDLEA*TYPQAVFWALDNGQS 410
            NGND E K   +N    +ES  YKD F   N  +  IFI++NFSEKSAD QGCD EA T  +AVFWA++NGQS
Sbjct: 3965 NGNDLENKTPKMNGNRTKESFIYKD-FFNKNNLKNNIFIDKNFSEKSADMQGCDSEARTSSRAVFWAVNNGQS 4036          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Planmine SMEST
Match: SMESG000021486.1 (SMESG000021486.1)

HSP 1 Score: 2575.05 bits (6673), Expect = 0.000e+0
Identity = 1331/1818 (73.21%), Postives = 1485/1818 (81.68%), Query Frame = 2
Query:  461 PKFENHKLSNIKLDNLNTTEKFSSVNFNKTDLKNSKTLRKLINSNSNIQRKDLPYFKSRNLEKTKINYQCFSRTLNKSEKLQLFRAFPNLNKKINTKESVENFQNLNNELIRINPSKNPLKIDGFVKFFYRNGNICVSINFSVNNKTEQLVKETILKTSIIDSNIITSYNNRLKLTGASTAIKSFLFVLSTKLSETATISNAKVRGEQINNCLNLLKKQKALPDYLMKSHIKYHNGDFVMLDLLSNSDLNVKKAILSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKTHIDKISEHLQTESESDIMFNLGLLDFIQMSKTDTLFHSLLTQPNSPSKLIDIIFYINYLNLKGTLAYISNATFDEYVKNYLRNCFLMHSITNIESSHSLGRDNIETWGPEMINMIPSSSYYFANCKERLLKLRQLNLSREIDKIHNIISPNTISEINNFLETVEVALPKKVDQLKALSKLGNKINEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQTVNTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKVDSETLKRKLSVDIDDNQSTTIVTNDIQQDVPQPKIIKKTRRNTVKPK*RCXXXXXXXXXXXXKETDADXXXXXXXXXXXXXXXXXHDPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISGGGLPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVIS--VIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            P+FEN KLSNIKLDNLNTT+KFSSVNFNKTDLKNSKTLRKL N+NSNIQRK+ PYFKSRNLEKTK NYQCFSRTLNKSEKLQLFR+FPNLNKKI TKESVE FQNLNNELIRI PSKNPLKIDGF+KFFYRNGNICVSINFSVNNK E LVK+TILKTSIIDSNIITSYNNRLK TGASTAIK FLFVLS KLSETATISNAK               Q+ALPDYLMKSHIKYH+GDFVMLDLLS+SDLNV  A LSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIK +  K S+H Q E ESDIMFN+GLL+F +M   DT   SL +QP S  K+IDIIF++NYL LKG L + SN ++ +YV NY+RNC  ++SI++IE+ ++L  D+IE W P ++ MIP  SY+ ++CKERLL+LRQ  LS EID++HNIISP TI  IN+FL  ++   P+K  QLKAL  L N IN    ES+   I KAKRFL+F+IRDKK  L+ +++ +RI  +C KIC+ NM+  I  II  L   +T     Q  + S S T+ N ++SV+      S  + D    E+    +   +KR+L  + D + +  I+      ++ +P                              E+D                    DP IWFTD++ID +L+NHI + +F SI CFIVEIL  N  +D+FPIPE VFKAQ+ILCPLNI+  HWILFVYCK+SL SYF+DPI   RH F NKT AL++TMALN+LF+LKAAMTFHPH++F YQ N+YDCGP+ICAYAM ISG WQSFP+ F++IIRKEVHQ +LF QQKD K+SGGGLPKFMEIIKRNGV+K SSA+QAFLLKQNSC+SSLL E+FK + NTTVLSPELT  ++AQ                I H +   ++PND NW L++FSLV G SYIFNF +R +TERLI IGENMT+YLNKF IS++KV F  +HNI+H SIT DD  LFASAFI L+E LIF  Q+S T  SE L S KI+QANEIC NLN +N KI EEIT+KYF  LKL+ NFMLLN TMC+AILDDCT++L ++LNYE +IKAQVIFAI+APPK+RE LLIIDY TDEYYI+NPTTL  TE+   +C+  RNK+NEIKETPGRV+N+G  P+DIRGSGLVSK+LICAFIK+Y NDLPL+NLNLREIG  ISSLLP+I+E KK   S  TK  KI K NLNLE RK+KI  L+  V +  VN+IID+I  QFP+R+K+ HKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPF GNWNNPL FCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGN+NRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATE GG
Sbjct: 1720 PEFENDKLSNIKLDNLNTTKKFSSVNFNKTDLKNSKTLRKLKNNNSNIQRKNSPYFKSRNLEKTKFNYQCFSRTLNKSEKLQLFRSFPNLNKKIKTKESVEKFQNLNNELIRITPSKNPLKIDGFLKFFYRNGNICVSINFSVNNKMEPLVKKTILKTSIIDSNIITSYNNRLKFTGASTAIKRFLFVLSNKLSETATISNAK---------------QRALPDYLMKSHIKYHDGDFVMLDLLSDSDLNVGNATLSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERLLRLRQWKLSSEIDRLHNIISPETIKHINSFLSEIDKVYPQKATQLKALQNLSNNINAIKSESDDETIAKAKRFLFFVIRDKKKFLLGSKYSYRIPLHCRKICTTNMTTHIFSIIQSLLLTLTVSDSEQIADRSDSITLVNTTQSVEINPGTQSGSIVDISVVETG-STEHARVKRRLE-ETDADSTIKII------EINKP----------------------------LNESD-------------------RDPTIWFTDDDIDLYLKNHISSLEFASINCFIVEILRTNPGEDLFPIPEKVFKAQIILCPLNIDKTHWILFVYCKNSLTSYFIDPILQYRHRFVNKTYALQVTMALNQLFNLKAAMTFHPHENFLYQENSYDCGPYICAYAMMISGVWQSFPDHFIDIIRKEVHQLQLFCQQKDQKVSGGGLPKFMEIIKRNGVRKTSSATQAFLLKQNSCISSLLDEYFKTRTNTTVLSPELTMNIVAQ----------------ISHSLEKIIVPNDSNWSLFVFSLVLGNSYIFNFHDRIVTERLIAIGENMTEYLNKFIISNRKVIFISEHNIEHASITSDDSLLFASAFIILIESLIFSKQVSHTRTSEFLKSVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISSLLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIIDIIVRQFPDRVKSKHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFQGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGG 3451          

HSP 2 Score: 1855.49 bits (4805), Expect = 0.000e+0
Identity = 923/1115 (82.78%), Postives = 1007/1115 (90.31%), Query Frame = 2
Query: 2564 DPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISGGGLPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            DP IWFTD++ID +L+NHI + +F SI CFIVEIL  N  +D+FPIPE VFKAQ+ILCPLNI+  HWILFVYCK+SL SYF+DPI   RH F NKT AL++TMALN+LF+LKAAMTFHPH++F YQ N+YDCGP+ICAYAM ISG WQSFP+ F++IIRKEVHQ +LF QQKD K+SGGGLPKFMEIIKRNGV+K SSA+QAFLLKQNSC+SSLL E+FK + NTTVLSPELT  ++AQN  +IRENVTF+QF+GI+H+IS++PND NW L++FSLV G SYIFNF +R +TERLI IGENMT+YLNKF IS++KV F  +HNI+H SIT DD  LFASAFI L+E LIF  Q+S T  SE L S KI+QANEIC NLN +N KI EEIT+KYF  LKL+ NFMLLN TMC+AILDDCT++L ++LNYE +IKAQVIFAI+APPK+RE LLIIDY TDEYYI+NPTTL  TE+   +C+  RNK+NEIKETPGRV+N+G  P+DIRGSGLVSK+LICAFIK+Y NDLPL+NLNLREIG  ISSLLP+I+E KK   S  TK  KI K NLNLE RK+KI  L+  V +  VN+IID+I  QFP+R+K+ HKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPL FCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGN+NRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATE GG
Sbjct: 4664 DPTIWFTDDDIDLYLKNHISSLEFASINCFIVEILRTNPGEDLFPIPEKVFKAQIILCPLNIDKTHWILFVYCKNSLTSYFIDPILQYRHRFVNKTYALQVTMALNQLFNLKAAMTFHPHENFLYQENSYDCGPYICAYAMMISGVWQSFPDHFIDIIRKEVHQLQLFCQQKDQKVSGGGLPKFMEIIKRNGVRKTSSATQAFLLKQNSCISSLLDEYFKTRTNTTVLSPELTMNIVAQNLTFIRENVTFRQFTGIDHIISIVPNDSNWSLFVFSLVLGNSYIFNFHDRIVTERLIAIGENMTEYLNKFIISNRKVIFISEHNIEHASITSDDSLLFASAFIILIESLIFSKQVSHTRTSEFLKSVKIKQANEICLNLNSINCKINEEITAKYFSNLKLNSNFMLLNETMCTAILDDCTRHLTKFLNYEDLIKAQVIFAIIAPPKHREILLIIDYITDEYYIINPTTLCGTESSQSVCRIFRNKINEIKETPGRVINMGDIPNDIRGSGLVSKLLICAFIKNYANDLPLINLNLREIGTNISSLLPIISESKKILMSDLTKITKIKKSNLNLEQRKLKIDELLHDVSHLTVNEIIDIIVRQFPDRVKSKHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLNFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKLLTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNNNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATEKGG 5778          

HSP 3 Score: 845.114 bits (2182), Expect = 0.000e+0
Identity = 439/639 (68.70%), Postives = 507/639 (79.34%), Query Frame = 2
Query:  461 PKFENHKLSNIKLDNLNTTEKFSSVNFNKTDLKNSKTLRKLINSNSNIQRKDLPYFKSRNLEKTKINYQCFSRTLNKSEKLQLFRAFPNLNKKINTKESVENFQNLNNELIRINPSKNPLKIDGFVKFFYRNGNICVSINFSVNNKTEQLVKETILKTSIIDSNIITSYNNRLKLTGASTAIKSFLFVLSTKLSETATISNAKVRGEQINNCLNLLKKQKALPDYLMKSHIKYHNGDFVMLDLLSNSDLNVKKAILSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKTHIDKISEHLQTESESDIMFNLGLLDFIQMSKTDTLFHSLLTQPNSPSKLIDIIFYINYLNLKGTLAYISNATFDEYVKNYLRNCFLMHSITNIESSHSLGRDNIETWGPEMINMIPSSSYYFANCKERLLKLRQLNLSREIDKIHNIISPNTISEINNFLETVEVALPKKVDQLKALSKLGNKINEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQTVNTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKVDSETLKRKLSVDIDDNQSTTIVTN 2377
            P+FEN KLSNIKLDNLNTT+KFSSVNFNKTDLKNSKTLRKL N+NSNIQRK+ PYFKSRNLEKTK NYQCFSRTLNKSEKLQLFR+FPNLNKKI TKESVE FQNLNNELIRI PSKNPLKIDGF+KFFYRNGNICVSINFSVNNKTE LVK+TILKTSIIDSNIITSYNNRLK TGASTAIK FLFVLS KLSETATISNAKVRGEQINN LNLLKKQ+ALPDYLMKSHIKYH+GDFVMLDLLS+SDLNV  A LSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIK +  K S+H Q E ESDIMFN+GLL+F +M   DT   SL +QP S  K+IDIIF++NYL LKG L + SN ++ +YV NY+RNC  ++SI++IE+ ++L  D+IE W P ++ MIP  SY+ ++CKERLL+LRQ  LS EID++HNIISP TI  IN+FL  ++   P+K  QLKAL  L N IN    ES+   I KAKRFL+F+IRDKK  L+ +++ +RI  +C KIC+ NM+  I  II  L   +T     Q  + S S T+ N ++SV+      S  + D    E+    +   +KR+L VDID+ +S    TN
Sbjct: 4025 PEFENDKLSNIKLDNLNTTKKFSSVNFNKTDLKNSKTLRKLKNNNSNIQRKNSPYFKSRNLEKTKFNYQCFSRTLNKSEKLQLFRSFPNLNKKIKTKESVEKFQNLNNELIRITPSKNPLKIDGFLKFFYRNGNICVSINFSVNNKTEPLVKKTILKTSIIDSNIITSYNNRLKFTGASTAIKRFLFVLSNKLSETATISNAKVRGEQINNTLNLLKKQRALPDYLMKSHIKYHDGDFVMLDLLSDSDLNVGNATLSSSELSRSQMRDLFKSFPELAELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKLNETKDSDHSQAEGESDIMFNIGLLNFHEMCLKDTTLRSLFSQPKSSEKIIDIIFHLNYLQLKGELKHTSNGSYGDYVCNYVRNCLSLYSISDIETYNTLSLDDIEKWAPSLVKMIPPLSYHSSSCKERLLRLRQWKLSSEIDRLHNIISPETIKHINSFLSEIDKVYPQKATQLKALQNLSNNINAIKSESDDETIAKAKRFLFFVIRDKKKFLLGSKYSYRIPLHCRKICTTNMTTHIFSIIQSLLLTLTVSDSEQIADRSDSITLVNTTQSVEINPGTQSGSIVDISVVETG-STEHARVKRRLEVDIDEVESIIHTTN 4662          

HSP 4 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMYLFKN 7062
            ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMYLFKN
Sbjct: 5779 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMYLFKN 6163          

HSP 5 Score: 792.341 bits (2045), Expect = 0.000e+0
Identity = 380/381 (99.74%), Postives = 381/381 (100.00%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKMY 7050
            ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEK+Y
Sbjct: 3452 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKIY 3832          

HSP 6 Score: 442.195 bits (1136), Expect = 0.000e+0
Identity = 216/364 (59.34%), Postives = 269/364 (73.90%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSAR 6999
            A C+DLLDEYH QTI +FFRLLTS C Y++ IN  SL  VT PRLGIK P+L +S +W NGKESK +HSGRKTRF R R ++ +F + HNI + F +    PS+ ITT++ GT I+   LRKT SK+LH AL DSYLSKWE S  SN + SA+KL P +NK IFRS+L++F W FIHRARTNTLS FAK H  G+ RLCR C +EDET+ H +Q+CK++ +L   RHN CL  I  ++ K+  L+VVVDH CSLVP S ERVDL+IT+  +K I LVDMKCP DSV+NF+ VD LNL KY  LK  IQAVKPD+KVEL TC+ GSLGS   KT ++L+K+GV+   +  L+KECA+SNIAHSA+
Sbjct: 1162 AGCIDLLDEYHAQTIVYFFRLLTSTCGYSKTINTFSLLSVTSPRLGIKNPTLSQSFEWINGKESKLNHSGRKTRFHRLRTSIEYFSRVHNIKLLFEIFKQNPSIRITTSLTGTRIILPKLRKTLSKILHSALQDSYLSKWEMSNHSNLLVSAIKLCPLVNKLIFRSDLTDFEWKFIHRARTNTLSTFAKPHKAGEDRLCRRCKSEDETILHVLQTCKINQSLATNRHNACLIKIKDSI-KDPELLVVVDHKCSLVPTSSERVDLIITNTEKKTILLVDMKCPIDSVSNFQLVDNLNLEKYAKLKLDIQAVKPDYKVELHTCIMGSLGSIESKTEDLLLKMGVQPNRIIGLMKECAISNIAHSAK 1524          

HSP 7 Score: 338.576 bits (867), Expect = 0.000e+0
Identity = 173/261 (66.28%), Postives = 212/261 (81.23%), Query Frame = 2
Query: 5126 SLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            +LL+ + V  +F +ILQLLY+DTS+FY C  + TP+IPIK+GVKQGCPISMILFA+AINPVLEA+S S+  PFMIG S V++LAYADDIALIA +  DLQ + ++AV TA  IGFEYRPEKC Y+Q PKV   SEI++NN  IKKL S EFYQYLGVP+G+  DQSPY+I+ K + DT+K+A+S L GWQKLKAYKIF+HSRLIFPFRTREIKT +L+  + NS  +VN +SQLRG  RK+L LPN SE+SYFYN+TENGG
Sbjct:  901 TLLKHMNVSAEFVNILQLLYTDTSSFYQCNQMQTPDIPIKKGVKQGCPISMILFAIAINPVLEAISLSNTTPFMIGTSSVQVLAYADDIALIATNSSDLQTLFDLAVNTANMIGFEYRPEKCAYIQYPKVETVSEIIVNNVLIKKLASNEFYQYLGVPIGDNNDQSPYEIVSKVIEDTKKIAHSNLYGWQKLKAYKIFLHSRLIFPFRTREIKTSSLADPSRNSRINVNNTSQLRGHLRKILNLPNHSEISYFYNSTENGG 1161          

HSP 8 Score: 56.6102 bits (135), Expect = 0.000e+0
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  192 NGNDFEYKLFILNEKSAEESIKYKDYXXXXXXXXXXXXXXXXXSEKSADTQGCDLEA*TYPQAVFWALDNGQS 410
            NGND E K   +N    +ES  YKD F   N  +  IFI++NFSEKSAD QGCD EA T  +AVFWA++NGQS
Sbjct: 3936 NGNDLENKTPKMNGNRTKESFIYKD-FFNKNNLKNNIFIDKNFSEKSADMQGCDSEARTSSRAVFWAVNNGQS 4007          

HSP 9 Score: 594.734 bits (1532), Expect = 1.448e-171
Identity = 361/931 (38.78%), Postives = 546/931 (58.65%), Query Frame = 2
Query: 1964 INEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQTV--NTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKV---------DSETLKRKLSVDIDDNQSTTIVTND---IQQDVPQPKIIKKTRRNTVKPK*RCXXXXXXXXXXXXKETDADXXXXXXXXXXXXXXXXXHDPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISG---GGLPKFMEIIKRNGVKKISSA--------SQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPN----RIKTTHKPYLG-NKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLK 4666
            IN+  I  +  D+ K+KRF+YF++RD K  L+ N+  FR+   C+K C++ MS  I+ II  L P + +VKD   +  +  +   +EN+ +   P++      +      E  + V         ++  L     V+ D N+S    +N    I +++  P   +  +RNTVK +               K T  +                  DP+IWF+D +ID +LE HI N     IKCFIV ILC+N+++++  IP ++  A+++ CPLNINN+HWILFVYCK S  SYF+DPI  NR++  NK +ALKI +ALN  F+LK A++++PH + +YQNNN+DCGPF CAYA+ IS +  +FP+ F++ IR++VH+ ++       +I G   GG    M++   N  K I+          +   L  Q  CVSS++ ++++N    +VLS ELT  +IAQNN +I +NVTFKQF GI+H++ VIP   +W L+++S+    S+IF+F  RT+ +RLI IG  +TDYLN+F + ++ V F  +H+I H +    D   FAS FI L E L++E  +    + +SL+  K +   EI   LNL+N KIT++I  +YF  LKL D+++LLN T+C AI DDCTQY+ ++LN EC++KA VIFAI++PPK  E LL+IDY+T+E+Y L+P T          C ++  K+NE++E+ GR +  G   HDIRGSGL+SK+LICAFI++Y  D  L N+NL EIG  ++SL+P+++     +   + K    N   LNL+ RK KI  L+ K+ + +V++II  I    P     + K   +PYLG N  +P+K N      +F+T+MK TV ++ N+ +V I P FQ+I+ NF         W+N LKF K S + L L   S+ EI+  L+
Sbjct:    4 INDEQIIDDTYDV-KSKRFIYFLLRDSKKYLIRNQ-TFRLFETCNKYCTSEMSQQISLIITKLKPIVINVKDVDLIEQDCDLDKPIENI-DITKPIVIEEIHCMKCNSILEKCILVREGMNVNICENCLLDAISVVEPDSNESNQTNSNHDSPITENIINPPTKRTGQRNTVKKQ-----------PSKPKSTICNKYLTIDN----------RDPEIWFSDNDIDWYLETHIDNPMHGYIKCFIVNILCSNIQEEVVAIPRSISNAEMVFCPLNINNSHWILFVYCKKSHSSYFIDPILKNRNNLINKQMALKINIALNRFFNLKIAVSYNPHKNLQYQNNNFDCGPFTCAYAVIISKDLDNFPDGFIDEIRRDVHRNQM-------EIVGNLIGGAKTKMDMSSFNFKKAIAKTKYSNNNPNTSNILKSQMPCVSSIICKYYENNCKVSVLSAELTLNLIAQNNSFIADNVTFKQFKGIDHILCVIPKFNDWCLFIYSIKLKHSHIFDFNYRTIDDRLIEIGVKITDYLNQFCL-NRNVKFLANHHISHSTFLSYDTQYFASHFIVLFEKLVYEIHLDCDKVYDSLSKIKTETCIEISPGLNLINGKITDKIIFEYFNKLKLSDDYILLNKTLCVAISDDCTQYMKDFLNIECMMKANVIFAIISPPKVHELLLVIDYSTEEHYYLSPVTTDLNVVSQHFCYNILIKINELRESKGRAMKTGHCRHDIRGSGLLSKILICAFIRNYALDYSLENINLHEIGKIVNSLVPIVDGSDNVKYEKREKLKAANTLKLNLKQRKEKINQLLIKLSDSDVDEIICTILTNIPRLENLQKKEFREPYLGKNHNKPKKFNNP---AEFLTNMKTTVYRILNDQSVKIEPPFQEIINNFTHPDVVPECWDNVLKFSKISDELLELTYISSEEILSNLQ 899          

HSP 10 Score: 56.6102 bits (135), Expect = 3.598e-7
Identity = 41/73 (56.16%), Postives = 49/73 (67.12%), Query Frame = 3
Query:  192 NGNDFEYKLFILNEKSAEESIKYKDYXXXXXXXXXXXXXXXXXSEKSADTQGCDLEA*TYPQAVFWALDNGQS 410
            NGND E K   +N    +ES  YKD F   N  +  IFI++NFSEKSAD QGCD EA T  +AVFWA++NGQS
Sbjct: 1631 NGNDLENKTPKMNGNRTKESFIYKD-FFNKNNLKNNIFIDKNFSEKSADMQGCDSEARTSSRAVFWAVNNGQS 1702          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Planmine SMEST
Match: SMESG000044750.1 (SMESG000044750.1)

HSP 1 Score: 1354.35 bits (3504), Expect = 0.000e+0
Identity = 694/1119 (62.02%), Postives = 849/1119 (75.87%), Query Frame = 2
Query: 2564 DPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISGGG---LPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQ-KINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            D KIWFTD++ID +LE+HI N +F  +KCFIVEIL +N + +IFP+P+N+FKAQ+ILCPLNIN +HWILFVYCK + +SYFVDPI   RH+  NK+ ALKITMALN LFDLKAA+TFHPHD+  YQ+NNYDCGP+ICAYAM IS EWQ+FP +F+E IRK VH+F+    Q  PK+SGGG   LP F          K++   +A L  +NSCV SL+ EWF NKN  TVLSPELT  +IA NN++IRENVTF+QF+ +++VI+VIPN+ +W LY+FS V   SYI NF+ R L ERL+ IGE+MTDYLNKFFIS  KV F  +HN  H S   +DPH FASAFIE +E   F N +S T I+E+L SFK+Q  NEICKNLNL+NF I +EI +KYFK L L  NF+ LN+ MC+AI+DDCT+YLN++LNY+ +IKAQVIFAIVAPPK+RE L IIDYNTDEYY+LNPTTL   +N+L  CK LRNK+NEI+E+P RVLN+G  PHDIRGSGLVSK+L C+++ +Y NDLPLV LNLR+IGN +SS LP+ +E KK ++      N+ +K + NL+ RK KI  L+ KV   NV++I+DVI +Q   +   THKPYLGN  R + +INK  L++ F +DMK TV+ + N+ +V +RP ++ I+ NF  K P    W+   KFC RS + L L+  SN E++F+LK+ADNTSPG+DGI+YRD+++LDPEGKLLTFLFNKII  K+IPDSWKSFKTLL PKP K  KYD VSSWRPIALLSVIYK+FASCLA+RLT+WIN NNLLHIGQKGGSRHDGCVEHNSILS+ALEHSKYSKN  LAIAWLDIKDAFGSVPH YMWSLLRF+G+  +F+                             ++  C                       EPFMIGES VKILAYADDIAL++KS  DLQ++TNIAV  A+EIGFEYRPEKCGY++LP +  +S+ILIN+ KIK+L S EFYQYLGVPVGEE DQSPYDIL K VSDTRK+A+S+LLGWQKLKAYKIF+HSRL+FPFRTREIKT AL+KSN N+N +VNI+SQLR CFRKM+ LPN SEV YFYN+TENGG
Sbjct:  586 DSKIWFTDDDIDYYLESHIGNPNFAPVKCFIVEILSSNCKDEIFPMPDNLFKAQIILCPLNINESHWILFVYCKLTKISYFVDPILRKRHNLINKSSALKITMALNNLFDLKAAVTFHPHDNLVYQDNNYDCGPYICAYAMLISQEWQTFPNNFIETIRKNVHRFQTTKFQNPPKVSGGGITTLPIFKRFQNVTRPPKVALPYKASLQNENSCVPSLIKEWFSNKNYITVLSPELTLNLIAHNNQFIRENVTFRQFTRVKYVIAVIPNNPHWCLYIFSPVFERSYILNFQGRVLNERLVSIGESMTDYLNKFFISTAKVNFIVNHNQTHFSFRSEDPHFFASAFIEFLERFFFGNILSFTKINETLKSFKLQITNEICKNLNLINFSINDEIITKYFKNLNLPSNFIFLNSAMCTAIMDDCTRYLNDFLNYDNIIKAQVIFAIVAPPKFREILFIIDYNTDEYYLLNPTTLLGNDNYLSACKILRNKINEIRESPNRVLNLGECPHDIRGSGLVSKILFCSYMSNYANDLPLVGLNLRQIGNVVSSFLPIASEIKKVKSLENNIINENHKESENLKERKNKIDQLLIKVFKMNVDEIVDVILDQISIKTVPTHKPYLGNIERVESQINKSNLIKNFNSDMKTTVNTIINDVDVDVRPKYENIITNFEHKIPLDRTWDKVFKFCNRSDKKLKLKYLSNSEVLFELKKADNTSPGVDGIKYRDMVMLDPEGKLLTFLFNKIISKKVIPDSWKSFKTLLIPKPGKGDKYDSVSSWRPIALLSVIYKLFASCLANRLTFWINKNNLLHIGQKGGSRHDGCVEHNSILSSALEHSKYSKNSQLAIAWLDIKDAFGSVPHAYMWSLLRFVGLMRNFS-----------------------------IRSKC-----------------------EPFMIGESAVKILAYADDIALVSKSAYDLQRVTNIAVVIASEIGFEYRPEKCGYIELPLIETESQILINDIKIKRLASSEFYQYLGVPVGEETDQSPYDILKKVVSDTRKIADSDLLGWQKLKAYKIFLHSRLVFPFRTREIKTSALAKSNANNNLTVNITSQLRNCFRKMMSLPNHSEVCYFYNSTENGG 1652          

HSP 2 Score: 564.688 bits (1454), Expect = 1.383e-163
Identity = 266/337 (78.93%), Postives = 299/337 (88.72%), Query Frame = 1
Query: 6037 RLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGILVDPEKM 7047
            RLGI  P+LQE+ DW NGKE KP HSG+KTRFQRARIA+AFF+K H+I++ FIV   +PSL+IT+  RGT ILT DLRKTTSKVLHMALCDSYLSKWEK C SNFIASA+KLSPKINKAI+R ++SEFAW+FIHRARTNTLSI AK HNKG+KRLCRLCH EDETMSH IQSCK+HLTLG+ERHNDCL LI+S+L+KNSNLIVVVDHVCSLVP SKERVDLMITD+ RKKIFLVDMKCPCD++NNF  VDLLNL+KYDSLK QIQ  KPDFKVELDTC+ GSLGSFP KT E+L+KIGV RT LK LLK+CALSNI+HSARRWH+HKTGILV+ EK 
Sbjct: 2052 RLGIINPTLQETFDWINGKEPKPWHSGKKTRFQRARIAIAFFKKEHDINIMFIVTKGQPSLFITSEKRGTFILTPDLRKTTSKVLHMALCDSYLSKWEKGCTSNFIASAIKLSPKINKAIYRGDISEFAWHFIHRARTNTLSINAKPHNKGNKRLCRLCHTEDETMSHIIQSCKIHLTLGSERHNDCLDLISSHLSKNSNLIVVVDHVCSLVPESKERVDLMITDMVRKKIFLVDMKCPCDTINNFALVDLLNLQKYDSLKMQIQDAKPDFKVELDTCIIGSLGSFPPKTPELLLKIGVDRTHLKGLLKDCALSNISHSARRWHYHKTGILVNLEKF 2388          

HSP 3 Score: 559.681 bits (1441), Expect = 6.536e-162
Identity = 270/363 (74.38%), Postives = 305/363 (84.02%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSA 6996
            ANCVDLLDEYHTQTITHFFRL TS C++AR++N+DSL FV GPRLGI  P+LQE+ DW NGKE K              + +    K H+I++ FIV   +PSL+IT+  RGT ILT DLRKTTSKVLHMALCDSYLSKWEK C SNFIASA+KLSPKINKAI+R ++SEFAW+FIHRARTNTLSI AK HNKG+KRLCRLCH EDETMSH IQSCK+HLTLG+ERHNDCL LI+S+L+KNSNLIVVVDHVCSLVP SKERVDLMITD+ RKKIFLVDMKCPCD++NNF  VDLLNL+KYDSLK QIQ  KPDFKVELDTC+ GSLGSFP KT E+L+KIGV RT LK LLK+CALSNI+HSA
Sbjct: 1653 ANCVDLLDEYHTQTITHFFRLFTSNCEFARKVNLDSLNFVAGPRLGIINPTLQETFDWINGKEPK--------------LGIL---KEHDINIMFIVTKGQPSLFITSEKRGTFILTPDLRKTTSKVLHMALCDSYLSKWEKGCTSNFIASAIKLSPKINKAIYRGDISEFAWHFIHRARTNTLSINAKPHNKGNKRLCRLCHTEDETMSHIIQSCKIHLTLGSERHNDCLDLISSHLSKNSNLIVVVDHVCSLVPESKERVDLMITDMVRKKIFLVDMKCPCDTINNFALVDLLNLQKYDSLKIQIQDAKPDFKVELDTCIIGSLGSFPPKTPELLLKIGVDRTHLKGLLKDCALSNISHSA 1998          

HSP 4 Score: 305.834 bits (782), Expect = 6.728e-83
Identity = 193/384 (50.26%), Postives = 256/384 (66.67%), Query Frame = 2
Query: 1163 NGDFVMLDLLSNSDLNVKKAILSSSELSRSQMRDLFKSFPELAELFFSES---DCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKTHIDKI--SEHLQTESESDIMFNLGLLDFIQMSKTDTLFHSLLTQPNSPSKLIDIIFYINYLNLKGTLAYISNATFDEYVKNYLRNCFLMHSITNIESSHSLGRDNIETWGPEMINMIPSSSYYFANCKERLLKLRQLNLSREIDKIHNIISPNTISEINNFLETVEVALPKKVDQLKALSKLGNKINEFSIESNFPDIDKAKRFLYFIIRDKKNLLVNNRFYFRISRNCSKICSANMSACITEII--DYLSPYITSVKDNQTVNTSVSATVENVSESVDPLLEVPSSPVTDTETFES 2293
            +GDF+MLDLL++ ++  +      +ELSRSQ+++LF SFPE+ ELFF E    D N +K  NLIN  K E  FP+QISFVGGKF+K  IDK+  S+  Q ESESDIMFNLGL     +S+ D + +SLL QP SP KL+DIIF++NYLNLKG     +N T++ YV+NY+ NC LMHSI ++E+   L  DNIE W P++I +IPSSS+Y ++CKE+LLKL+Q  LS EID+IHNII P TI EINNFL  ++ +   K DQLK L+ LG KIN   I+++  D+ KAKR LYFIIRDKK  L  + F + I  NC KIC+  MS  IT++I  + L     +V DN   N  VS      +E+++ L+  P +P  DT   E+
Sbjct:  199 DGDFLMLDLLNSFEIEGELG-QKITELSRSQIKELFNSFPEIQELFFIEKKSIDENPEKLINLINKFKIEETFPQQISFVGGKFVK--IDKLNDSQFPQVESESDIMFNLGLFSLFGLSEYDNILNSLLCQPKSPEKLVDIIFHLNYLNLKGNFDTSTNGTYENYVQNYIVNCLLMHSILDLETCAFLNLDNIELWAPKLIELIPSSSHYSSSCKEKLLKLKQWKLSGEIDRIHNIICPETIIEINNFLGVIDQSYTTKSDQLKFLTCLGEKINNIEIDNDVDDLVKAKRMLYFIIRDKKRFLNKDNFNYHIPFNCRKICTLKMSDFITKLIQSNELFEEREAVVDN---NIDVSP-----NENLNILIVEPVNPTPDTVIVET 571          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Planmine SMEST
Match: SMESG000078596.1 (SMESG000078596.1)

HSP 1 Score: 1135.55 bits (2936), Expect = 0.000e+0
Identity = 619/1119 (55.32%), Postives = 762/1119 (68.10%), Query Frame = 2
Query: 2561 HDPKIWFTDENIDKFLENHIRNSDFVSIKCFIVEILCANLEKDIFPIPENVFKAQVILCPLNINNAHWILFVYCKSSLMSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQNNNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKISGGG---LPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTVLSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLVSGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHISITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLE-LFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENG 5905
             DPKIWFTD++ID +LE+HI N +F  +KCFIVEIL +N + +IFP+P+N+FKAQ+ILCPLNIN +HWILFVYCK + +SYFVDPIF   H+  NK+ ALKITMALN LFDLKAA+TFHPHD+  YQ+NNYDCGP ICAYAM IS EWQ+FP +F+E IRK VH+F+    Q  PK+SGGG   LP F          K++   +A L  +NSCV SL+ E F NKN  TVLSPELT   IA NN++IRENVTF+QF+ +++VI+VIPN+ +W L                 ++L ERL+ IGE+MTDY NKFFIS  KV F  +HN  H S   +DPH FASAFIE +E   F N +S T I+E+L SFK+Q  NEICKNLNL+NF I +EI +KYFK L L  NF+ LN+ MC+AI+DDCT+YLN++LNY+ +IKAQVIFAIVAPPK+RE L IIDYNTDE Y+LNPTTL   +N+L  CK LRNK+NEI+E+P RVLN+G  P+DIRGSGLVSK+L C+++ +Y ND                  LP++    ++ +S  + F  I                         V++I +V + +  N I   HK     K R  KI++ +L++ F  ++   VD +F+  ++   PT +          P+  N        +R +  +N   L  NF     +K   NT                        + N + V+ +IPDSWKSFKTLL  KP+K  KYD VSSWRPIALLSVIYK+F SCLA+RLT+ IN NNLLHIGQKG SRHDGCVEHNSILS+ALEHSKY KN  LAIAWLDIKDAFGSVPH YMWSLLRF+GV E+F +I++ + SD STFYSCGPILTPNI I+QGVKQGCPISMILFALAINPVLEA+SRS CEPFMIGES VKILAYADDIAL++KS  DLQ++TNIAV  A+EIGFEYR EKCGY++L                  LLSK+                      K VSDTRK+A+S+LLGWQKLK YKIF+HSRL+FPFRTREIKT AL+KSN N+N +VNI+SQLR CFRKM+ LPN SEV YFYN+TENG
Sbjct:   92 RDPKIWFTDDDIDYYLESHIGNPNFAPVKCFIVEILSSNCKDEIFPMPDNLFKAQIILCPLNINESHWILFVYCKLTKISYFVDPIFRKWHNLINKSSALKITMALNNLFDLKAAVTFHPHDNLVYQDNNYDCGPHICAYAMLISQEWQTFPNNFIETIRKNVHRFQTSKFQNPPKVSGGGITTLPIFKRFQNVTRPPKVALPYKASLQNENSCVPSLIKEGFSNKNYITVLSPELTLNFIAHNNQFIRENVTFRQFTRVKYVIAVIPNNPHWCL-----------------QSLNERLVSIGESMTDYPNKFFISTAKVNFIVNHNQIHFSFRSEDPHFFASAFIEFLEKFFFGNILSFTKINETLKSFKLQITNEICKNLNLINFSINDEIITKYFKNLNLPSNFIFLNSAMCTAIMDDCTRYLNDFLNYDNIIKAQVIFAIVAPPKFREILFIIDYNTDECYLLNPTTLLGNDNYLSTCKILRNKINEIRESPNRVLNLGECPYDIRGSGLVSKILFCSYMSNYAND------------------LPLVGLNLRQIDSVVSSFLPI-------------------------VSEIKNVKSLE-NNIINENHKESENLKERKNKIDQ-LLIKVFKMNVDEIVDVIFDQISIKTVPTHK----------PYLDNK-------ERVESQINKSNLIKNFNS--DMKTTVNT------------------------IINDVDVD-VIPDSWKSFKTLLIQKPSKGDKYDSVSSWRPIALLSVIYKLFTSCLANRLTFCINKNNLLHIGQKGDSRHDGCVEHNSILSSALEHSKYGKNSQLAIAWLDIKDAFGSVPHAYMWSLLRFVGVDEEFVTIIERMDSDKSTFYSCGPILTPNIAIRQGVKQGCPISMILFALAINPVLEAISRSKCEPFMIGESTVKILAYADDIALVSKSAYDLQRVTNIAVAIASEIGFEYRSEKCGYIEL------------------LLSKQ---------------------KKVVSDTRKIADSDLLGWQKLKTYKIFLHSRLVFPFRTREIKTSALAKSNANNNLTVNITSQLRNCFRKMMSLPNHSEVCYFYNSTENG 1065          

HSP 2 Score: 261.922 bits (668), Expect = 2.031e-70
Identity = 122/164 (74.39%), Postives = 139/164 (84.76%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIF 6399
            ANCVDLLDEYHTQTITHFFRL TS C++AR++N+DSL FV GPRLGI  P+LQE+ DW N KE KP HS +KTRFQRARIA+AFF+K H+I + FIV   +PSL+IT+  RGT ILT DLRKTTSKVLHMALCDSYLSKWEK   SNFIASA+KLSPKINKAI+
Sbjct: 1067 ANCVDLLDEYHTQTITHFFRLFTSSCEFARKVNLDSLNFVAGPRLGIINPTLQETFDWINVKELKPRHSCKKTRFQRARIAIAFFKKEHDIYIMFIVTKGQPSLFITSEKRGTFILTPDLRKTTSKVLHMALCDSYLSKWEKGRTSNFIASAIKLSPKINKAIY 1230          
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Planmine SMEST
Match: SMESG000079542.1 (SMESG000079542.1)

HSP 1 Score: 765.763 bits (1976), Expect = 0.000e+0
Identity = 417/784 (53.19%), Postives = 539/784 (68.75%), Query Frame = 2
Query: 3557 DDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKNLNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLNYECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFICKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDLPLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRXXXXXXXXXXVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGILVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLKFCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDXXXXXXXXXXXTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVIYKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSKYSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDTSTFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPFMIGESPVKXXXXXXXXXXXXKSVEDLQKITNIAVRTAAEIGFEYRPEKCGYLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDKAVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGNSNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGG 5908
            DDP   AS FI  +E  I  N ++R  + E L + + +  +E+  NLNL N KITE++ + +F  L L +NF+ LN TM +AIL+DCTQYLNE+LN E ++KA+++FAI+APPK R+ L+IIDY +DEYY+LNP++L     +L    SL  K+NEIKETP     +G  PHDIRGSGLVS++LICAFIKHY  DL L N+NLR+IGN I SLLP + +  K+  S K   +      L L+ R + I   +  + N NVN++          R K +  P+   K +            F  +MK TV K+  N  ++ RPT +  + NF  + P   +++N L F  +S+  L L    + E++F+LKRADNTSPGIDGI+Y D+ + D EGKLLT L+NKII    +PD WKSFKTL+TPKP+K  KY+ +SSWRPIALLSV+YK+FAS L+ RLT W+N NNLLHIGQKGGS HDGCVEHNS+LS+ LEHSKYSK+ P+ IA+LDIKDAFGSVPHDYMW +LR IGVGE FT+ L+LLY++TS++Y+CGPI+TPNIPIKQGVKQGCP+SMILFA+AINPVL+AV+ S  +PF +GES +++LAYADDIALIA +  DLQ I NIA   A EIGFEYRP+KC Y+QLP V                            + E  +QSPY+IL+K VSD +KLA+S+L GWQKLKAYK F+HSRL FPFRTR+ K  ALS +  N+      +++LR   RKM+ LPN SE+SYFYN+ ENGG
Sbjct:    4 DDPIHHASTFILFLEEFISGNVVNRDKVIEKLVNMQSKMCDEVVVNLNLKNCKITEKLLTNFFINLNLSENFIFLNNTMTTAILNDCTQYLNEFLNIENLMKAKIVFAIIAPPKARQILMIIDYTSDEYYLLNPSSLLPNFPYLCTANSLLTKINEIKETPELCKLLGNCPHDIRGSGLVSRILICAFIKHYALDLSLENINLRDIGNVIKSLLPTVQDIIKD--SIKNLSDNKTNVKLKLDQRILLINENLLTLQNANVNEM----------RNKISKVPHPKTKFKSS----------FNQNMKTTVYKILVNDEINERPTIKDHIGNFSHQDPLIKSYDNVLNFGLKSQNTLLLRPIIDKEVIFELKRADNTSPGIDGIKYNDIAIHDAEGKLLTLLYNKIITENTMPDVWKSFKTLMTPKPDKGDKYNLISSWRPIALLSVVYKIFASILSRRLTSWVNRNNLLHIGQKGGSVHDGCVEHNSVLSSCLEHSKYSKDTPIIIAFLDIKDAFGSVPHDYMWKILRHIGVGEKFTNTLKLLYTETSSYYTCGPIVTPNIPIKQGVKQGCPLSMILFAIAINPVLQAVTLSKVKPFKVGESSIQVLAYADDIALIANNTHDLQNILNIAFDVAREIGFEYRPKKCAYIQLPNVET--------------------------ISEHTNQSPYEILNKVVSDAKKLADSDLCGWQKLKAYKTFLHSRLTFPFRTRDFKISALSANVCNN------TTKLRSHLRKMMSLPNNSEISYFYNSVENGG 733          

HSP 2 Score: 343.584 bits (880), Expect = 0.000e+0
Identity = 183/374 (48.93%), Postives = 234/374 (62.57%), Query Frame = 1
Query: 5908 ANCVDLLDEYHTQTITHFFRLLTSECDYARQINIDSLKFVTGPRLGIKTPSLQESLDWFNGKESKPHHSGRKTRFQRARIAVAFFEKTHNISVSFIVKDHKPSLYITTAMRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKINKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETMSHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSKERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQAVKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNIAHSARRWHFHKTGIL 7029
            A+C DLLDEYHTQTI++FFRL T+ C++ ++INIDSLKFVTGPRLG   PSLQ+S +W N  +    HSG+K RF R R A+ FFEKTHNI++SF V D KP L +TTA++GTIILT   R+  SKVLH+AL DSY +KW+ S                                                N  + RLCR CH +D+T+ H +Q+CKVHLTL   RHNDCL+ I  +L K+ +LIVVVDH CSLV NSKERVDL+IT+  +K I +VD+KCP DS+  FE V+  NL KYDSLK QIQA KP F V++ TC+ GS+GS+     ++L K+GV         ++ ALS        WH+H TG+L
Sbjct:  734 ASCTDLLDEYHTQTISYFFRLFTANCEFTKRINIDSLKFVTGPRLGNNNPSLQDSFNWINKADIIQKHSGKKPRFFRPRTAIQFFEKTHNITISFEVLDDKPILRLTTALKGTIILTEFDRRLVSKVLHLALYDSYFTKWKNS------------------------------------------------NIIENRLCRRCHNQDKTLPHVLQNCKVHLTLALNRHNDCLQQIVHHL-KSPSLIVVVDHTCSLVSNSKERVDLIITNNEKKTILMVDIKCPFDSLVTFETVNKENLAKYDSLKKQIQAAKPSFTVDIFTCIIGSMGSY-----DLLGKMGVP-------FEKVALS--------WHYHVTGVL 1038          
The following BLAST results are available for this feature:
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
CU638714.17.084e-2030.67pep chromosome:GRCz11:24:19863246:19868789:1 gene:... [more]
CABZ01033394.17.454e-1928.63pep chromosome:GRCz11:13:6032844:6038477:-1 gene:E... [more]
si:dkey-187k19.21.810e-1831.58si:dkey-187k19.2 [Source:ZFIN;Acc:ZDB-GENE-131121-... [more]
BX323564.16.827e-1831.58pep chromosome:GRCz11:2:10597810:10600950:-1 gene:... [more]
BX284696.19.751e-1827.95pep chromosome:GRCz11:7:42935126:42939263:1 gene:E... [more]
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSXETT00000002428.16.863e-2034.36pep primary_assembly:Xenopus_tropicalis_v9.1:3:159... [more]
rpl22l15.827e-1930.93ribosomal protein L22 like 1 [Source:Xenbase;Acc:X... [more]
slc7a11.963e-1833.00solute carrier family 7 (cationic amino acid trans... [more]
ENSXETT00000032317.14.693e-1833.33pep primary_assembly:Xenopus_tropicalis_v9.1:1:130... [more]
ENSXETT00000040456.15.092e-1833.33pep primary_assembly:Xenopus_tropicalis_v9.1:8:873... [more]
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q03278|PO21_NASVI8.522e-1827.53Retrovirus-related Pol polyprotein from type-1 ret... [more]
sp|Q03274|PO22_POPJA2.804e-1527.80Retrovirus-related Pol polyprotein from type-1 ret... [more]
sp|P16423|POLR_DROME3.239e-1224.88Retrovirus-related Pol polyprotein from type-2 ret... [more]
sp|P14381|YTX2_XENLA2.338e-1027.83Transposon TX1 uncharacterized 149 kDa protein OS=... [more]
sp|P08548|LIN1_NYCCO8.984e-1025.36LINE-1 reverse transcriptase homolog OS=Nycticebus... [more]
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
Q7YXU73.275e-6332.36ORF2 (Fragment) OS=Girardia tigrina OX=6162 PE=4 S... [more]
A0A4Y2Q0X51.767e-6233.96Retrovirus-related Pol polyprotein from type-2 ret... [more]
A0A4Y2XBD82.773e-6233.49Retrovirus-related Pol polyprotein from type-2 ret... [more]
A0A4Y2L3672.844e-6134.16Retrovirus-related Pol polyprotein from type-1 ret... [more]
A0A4Y2WJK91.936e-6034.16Retrovirus-related Pol polyprotein from type-1 ret... [more]
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000034831.11.459e-2331.02pep primary_assembly:Astyanax_mexicanus-2.0:3:1621... [more]
ENSAMXT00000034560.11.397e-2126.46pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000046127.17.436e-1832.54pep primary_assembly:Astyanax_mexicanus-2.0:7:1638... [more]
ENSAMXT00000048276.12.685e-1734.55pep primary_assembly:Astyanax_mexicanus-2.0:17:785... [more]
ENSAMXT00000039514.17.360e-1729.28pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000036683.11.140e-1729.68pep primary_assembly:ASM223467v1:19:23029986:23032... [more]
ENSORLT00000028058.11.989e-1729.68pep primary_assembly:ASM223467v1:18:21516917:21520... [more]
ENSORLT00000039015.19.829e-1729.38pep primary_assembly:ASM223467v1:1:17620203:176228... [more]
ENSORLT00000034825.12.458e-1626.03pep primary_assembly:ASM223467v1:18:2674911:267863... [more]
ENSORLT00000040357.12.569e-1629.52pep primary_assembly:ASM223467v1:14:28942701:28945... [more]
back to top
BLAST of Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000021486.11.231e-17275.50SMESG000021486.1[more]
SMESG000021486.11.448e-17173.21SMESG000021486.1[more]
SMESG000044750.11.383e-16362.02SMESG000044750.1[more]
SMESG000078596.12.031e-7055.32SMESG000078596.1[more]
SMESG000079542.10.000e+053.19SMESG000079542.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30027800 ID=SMED30027800|Name=Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2|organism=Schmidtea mediterranea sexual|type=transcript|length=7747bp
TAAAAATCATGTTCATATTCTTAATAATAATTTTCTTAAACTTATGAATG
ATTTTCAGCAGTTATTTAAAAGTTATAGTATAATTCCTAATTATGATAAT
TCTAATAGGGATTTTCAAAAAACAACAAACACTGATAATAGAAAATTTAA
CGGAAATTGCTAACGCTAATGATACAGAAACTTTAGGTGTTAATGGTAAT
GATTTCGAATATAAACTTTTTATTCTGAATGAAAAAAGCGCTGAAGAAAG
CATTAAATACAAAGATTATTTTAATAAAAATAATTTTAAAGAAAAGAAGA
TCTTTATTAATGAAAATTTTTCTGAAAAGTCTGCAGATACGCAGGGTTGT
GATTTGGAGGCTTGAACTTATCCTCAAGCTGTGTTTTGGGCGCTTGATAA
TGGACAATCTAATTTAAAAATTGCTATTAAATATAATTAAATAAAATAAA
TTATAATTTACCAAAATTTGAAAATCATAAATTATCTAACATTAAATTAG
ATAACTTAAACACTACAGAAAAATTTTCAAGTGTAAATTTTAATAAAACT
GATCTTAAAAATTCAAAAACTTTAAGAAAACTTATAAATAGCAATTCTAA
TATACAGCGAAAAGATTTACCTTATTTCAAATCTAGAAATTTGGAGAAAA
CAAAAATTAATTATCAGTGCTTCTCTAGAACTTTAAACAAAAGTGAAAAA
CTTCAACTTTTTCGTGCTTTTCCAAACCTTAATAAGAAAATAAACACCAA
AGAAAGTGTCGAAAACTTTCAAAACTTAAATAATGAACTGATTAGAATAA
ATCCATCTAAAAACCCTTTAAAGATTGATGGATTTGTAAAATTTTTCTAT
AGGAACGGTAATATTTGCGTTTCTATAAATTTCAGTGTAAATAATAAAAC
GGAGCAATTAGTTAAGGAGACCATTCTTAAAACATCAATTATAGACTCCA
ATATAATAACTTCGTACAATAATAGATTGAAACTCACTGGCGCCTCAACA
GCCATCAAAAGTTTCTTGTTTGTTTTATCAACCAAACTTTCTGAAACGGC
CACAATATCAAACGCCAAAGTTCGGGGGGAACAGATTAATAACTGCCTAA
ATTTATTAAAAAAGCAAAAAGCTCTCCCGGATTATTTGATGAAATCACAT
ATCAAGTATCACAATGGTGATTTTGTTATGTTAGACCTCCTTAGCAATTC
TGACCTTAATGTCAAAAAAGCAATATTGTCCTCTTCAGAACTCTCTCGAT
CACAAATGCGTGATCTTTTTAAATCTTTCCCAGAACTGGCAGAGCTGTTT
TTCAGTGAGAGTGATTGCAACACTGATAAATTTAAAAACCTAATTAATAA
TCTAAAATCAGAACATGGGTTCCCTGAACAGATCTCATTTGTGGGGGGTA
AATTTATTAAAACTCATATAGATAAAATTTCTGAACACTTACAAACTGAA
AGTGAATCGGATATAATGTTCAACCTAGGTTTGCTTGACTTTATTCAGAT
GTCAAAAACTGACACTTTATTCCACTCACTTCTGACACAGCCGAATTCTC
CCTCAAAGCTCATAGACATTATATTCTACATTAACTATTTAAACCTTAAA
GGAACTTTAGCATATATCTCAAACGCGACATTTGACGAATATGTCAAGAA
TTATTTGCGTAATTGCTTTTTAATGCATTCAATTACGAACATTGAAAGCT
CTCACTCATTAGGTCGTGATAACATTGAAACCTGGGGTCCGGAGATGATC
AATATGATCCCCAGTTCCTCATACTACTTTGCAAATTGTAAGGAGAGACT
TTTAAAATTACGGCAATTAAATCTATCTCGAGAGATTGATAAAATTCACA
ACATTATCTCGCCAAATACCATCTCGGAAATAAACAACTTTCTTGAAACT
GTAGAAGTTGCTTTACCAAAGAAAGTAGATCAATTAAAAGCTCTCAGCAA
ATTAGGGAACAAAATCAACGAATTTAGTATTGAATCGAATTTCCCCGACA
TCGATAAAGCAAAGCGATTTCTTTACTTTATTATCAGAGACAAGAAGAAC
CTCCTTGTCAACAATCGGTTTTATTTCCGTATTTCACGAAATTGCAGTAA
GATATGTAGCGCAAATATGAGCGCTTGTATAACTGAAATCATTGACTATC
TTTCACCATATATAACCTCGGTAAAGGATAATCAAACAGTGAATACCTCT
GTCTCTGCTACCGTTGAAAATGTCAGTGAGTCTGTTGATCCTCTTTTAGA
AGTACCCTCTTCTCCTGTTACTGACACTGAAACTTTTGAATCACCGCTTA
AAGTTGATAGTGAAACTTTAAAGCGAAAATTGTCAGTAGACATTGATGAT
AACCAATCAACTACAATAGTTACCAATGACATTCAACAGGATGTTCCACA
GCCAAAAATAATTAAAAAGACTAGAAGAAATACAGTCAAACCTAAATGAA
GGTGCGTGCCTGTATCAGTCTCAATATCTGCCCCAATCTCAAAAGAGACT
GATGCAGACAGCACAACAAATAAAATTTATAATAATTATAATAATCAAAT
AATTTCAATTCATGACCCAAAGATCTGGTTCACTGATGAAAATATTGATA
AGTTTCTTGAAAATCACATCAGGAACTCAGACTTTGTGTCTATTAAATGC
TTTATTGTAGAAATTCTGTGTGCTAACCTCGAAAAAGACATTTTTCCAAT
CCCGGAAAACGTCTTCAAAGCACAAGTAATATTATGCCCCCTTAATATAA
ATAATGCTCACTGGATCTTGTTCGTGTACTGTAAATCTTCTCTAATGTCT
TACTTTGTCGATCCAATATTTAGCAACCGCCATAGCTTTACAAATAAAAC
TATTGCCCTCAAAATCACCATGGCTTTAAATGAATTATTTGATCTTAAAG
CAGCAATGACCTTTCACCCTCATGATGACTTTAAATATCAAAATAACAAC
TATGATTGTGGCCCTTTCATCTGTGCATATGCCATGAGGATTAGTGGCGA
ATGGCAAAGTTTTCCTGAAAGCTTTGTCGAGATAATCCGAAAAGAGGTCC
ATCAATTCAAACTTTTCCCACAACAAAAAGATCCCAAAATATCGGGTGGT
GGCCTACCAAAATTCATGGAGATCATCAAGCGTAATGGAGTTAAGAAAAT
CAGCAGTGCTAGTCAAGCATTTCTCTTGAAACAGAACTCATGTGTTTCTT
CCTTGTTAATTGAATGGTTTAAAAATAAGAACAATACAACTGTTCTTTCT
CCTGAACTGACATCGAAAGTGATTGCACAGAACAATAGATATATTAGAGA
AAATGTAACATTCAAACAATTTTCTGGAATAGAACACGTCATCAGCGTCA
TTCCAAATGACATGAATTGGGGTCTTTATCTCTTCTCTCTTGTTTCAGGA
ATCAGTTATATATTCAATTTTAGAAACAGAACTTTAACTGAGAGACTAAT
TGGTATTGGAGAAAACATGACTGACTACTTGAACAAATTTTTCATTTCGG
ACAAAAAAGTCACTTTCAATCGTGACCACAACATCGATCACATTTCCATC
ACACTTGATGATCCACATCTATTTGCTTCTGCTTTTATTGAACTTGTTGA
AATGTTGATTTTTGAAAACCAGATTTCTCGTACAAGTATCAGTGAGTCCC
TAAATTCTTTTAAAATTCAGCAAGCAAATGAGATCTGCAAGAATTTAAAC
TTATTAAATTTCAAAATTACCGAGGAAATAACATCAAAATACTTTAAAAT
TTTAAAACTCGATGATAATTTCATGCTTTTAAATGCGACAATGTGCTCAG
CAATCCTTGATGACTGCACTCAATACTTGAATGAATACTTAAACTACGAG
TGCGTCATTAAGGCACAAGTGATTTTCGCAATTGTTGCACCCCCAAAATA
TCGAGAATTTCTTTTAATTATTGATTATAATACTGATGAGTACTATATTC
TTAATCCAACGACTCTGTCTGAAACTGAAAATCACCTGTTCATCTGCAAG
AGCCTTAGGAACAAATTAAATGAAATAAAGGAAACACCTGGTCGCGTATT
AAATATTGGTGTTTTCCCGCACGATATCCGAGGATCCGGTCTTGTGAGTA
AAGTCCTCATCTGCGCTTTCATCAAACATTACGTAAATGATTTACCCCTT
GTAAATTTAAACTTGCGCGAGATAGGTAACACAATCAGCTCATTGCTTCC
TGTCATAAACGAATATAAAAAAGAACAAAATTCTTGTAAAACTAAATTCA
ATAAAATCAATAAGGGTAATTTAAACTTAGAAATGCGAAAAATAAAAATT
GCGATACTAATCAAGAAAGTATTGAACTTTAACGTTAATCAAATCATTGA
CGTCATCAATGAACAGTTCCCAAACAGAATAAAAACCACACACAAGCCGT
ATTTGGGTAATAAAACACGACCCCAAAAAATAAATAAAGGGATATTAGTA
AGAAAATTCATGACTGACATGAAATGGACGGTCGATAAAGTCTTTAACAA
CACAAATGTCAGCATAAGACCAACTTTCCAGAAAATTGTCCTAAACTTCC
TTATAAAATCACCTTTTCACGGAAATTGGAATAATCCGCTCAAATTTTGT
AAACGTTCCAAACAAGCTCTTAACTTGGAGCTTTTCTCAAATTTTGAGAT
AATGTTCCAACTCAAGAGAGCTGACAACACAAGTCCCGGTATTGATGGCA
TTCAATACCGCGATTTGTTGCTCCTTGACCCCGAGGGTAAATTATTGACG
TTTTTATTCAATAAAATCATTGTAAATAAAATAATACCAGACAGTTGGAA
AAGCTTCAAAACTCTTCTAACTCCTAAGCCTAATAAAGATGGAAAGTATG
ATGATGTTTCATCCTGGCGTCCAATTGCCTTACTTTCTGTGATCTACAAA
GTGTTCGCCTCATGTCTTGCGAGTCGTTTGACTTACTGGATAAATACCAA
TAATCTTTTACATATCGGCCAGAAAGGTGGTTCCAGACATGATGGATGCG
TTGAACACAACTCGATTCTTTCAGCTGCTCTCGAACATTCAAAATACAGC
AAGAACTGTCCACTTGCTATAGCTTGGCTTGACATCAAAGATGCCTTTGG
CAGTGTCCCACATGATTACATGTGGTCCTTACTTCGGTTCATTGGAGTAG
GGGAGGATTTTACATCCATTTTACAGTTGTTATATTCCGACACAAGCACG
TTCTACAGTTGTGGCCCAATATTGACTCCGAACATTCCCATCAAACAGGG
TGTCAAACAAGGATGTCCTATATCGATGATTTTGTTTGCCTTGGCCATCA
ACCCTGTACTTGAGGCAGTATCGCGTTCTGACTGCGAGCCTTTCATGATT
GGAGAATCTCCTGTCAAGATTCTTGCCTATGCTGACGATATTGCTCTGAT
CGCTAAATCTGTTGAAGACCTTCAGAAAATCACAAATATAGCTGTTAGAA
CTGCAGCTGAAATAGGATTTGAGTATCGGCCTGAAAAATGTGGATACCTT
CAACTTCCAAAAGTTCACATTGACAGTGAAATTTTAATCAACAACACAAA
AATCAAGAAATTACTGTCAAAGGAATTTTATCAATACCTCGGTGTTCCGG
TCGGTGAGGAACCTGATCAGAGTCCTTATGACATTCTTGATAAAGCTGTT
TCTGACACTCGAAAACTTGCTAACTCTGAGTTGCTAGGTTGGCAAAAGCT
AAAGGCTTATAAGATCTTTGTCCATTCTCGTTTGATCTTCCCCTTTAGAA
CTCGAGAAATCAAGACCGGTGCTCTTTCGAAATCCAATGGAAACAGCAAT
CGCTCTGTAAATATCAGTAGTCAATTAAGAGGTTGTTTTAGAAAAATGCT
GTGTTTGCCTAATCAGTCTGAAGTAAGTTACTTTTATAACGCAACTGAAA
ACGGAGGGCAAATTGCGTTGATCTTCTTGATGAATATCACACGCAGACCA
TCACCCACTTTTTCCGACTACTAACTTCAGAATGTGACTATGCGAGACAG
ATCAACATTGACTCTTTAAAATTTGTCACTGGTCCGCGATTAGGAATCAA
AACACCGTCATTGCAAGAAAGTCTTGACTGGTTCAATGGTAAAGAGTCTA
AACCTCACCATTCTGGCAGAAAAACTCGTTTTCAAAGGGCTCGGATTGCG
GTTGCGTTTTTCGAAAAGACACACAATATCAGTGTATCATTCATAGTCAA
AGACCACAAACCATCGCTTTACATCACAACAGCAATGCGTGGCACTATCA
TATTAACCTCGGACCTTCGAAAAACAACATCAAAGGTTTTACACATGGCA
CTCTGTGACTCGTACCTCTCTAAGTGGGAAAAGAGCTGCGTCTCGAACTT
CATAGCTTCAGCTGTGAAACTTTCTCCAAAAATAAACAAGGCAATCTTTC
GCAGTGAGTTATCAGAATTTGCATGGAACTTCATCCATCGAGCTCGCACA
AACACTCTTTCCATCTTTGCGAAACATCATAACAAAGGTGATAAGAGACT
TTGTCGACTGTGTCACGCTGAAGATGAGACAATGTCACACGCAATTCAAT
CGTGTAAGGTCCATCTGACTCTTGGTGCCGAACGACACAATGACTGTTTA
AAACTTATCGCATCAAATCTCACTAAGAATTCAAACTTGATTGTCGTGGT
TGATCACGTTTGTTCACTTGTCCCAAACTCCAAAGAACGCGTCGATCTAA
TGATCACTGACTTGAGCAGAAAGAAAATCTTTCTTGTTGATATGAAATGT
CCGTGTGACTCTGTCAACAATTTTGAGCAAGTGGATTTGCTGAATCTGCG
GAAGTATGATTCTCTTAAGAATCAGATCCAAGCTGTCAAACCTGACTTCA
AAGTTGAACTTGACACTTGTGTTTTTGGTTCACTAGGTTCATTTCCTCTA
AAAACCTCTGAAATACTCGTGAAAATCGGAGTCAAGCGTACCGAGCTGAA
ACCTCTACTGAAAGAATGTGCATTGAGTAACATAGCACATTCAGCTCGTC
GCTGGCATTTTCACAAAACTGGCATCTTAGTAGACCCTGAAAAGATGTAT
CTATTTAAAAATTAATTCACTAAGATCAAATCAAATTACTGTTGGCAATG
GTGTCATTTAACCTTTAAATGTTTGTATAAATGTTTGATGTATAAAAGTA
TATATTTGTATAAATAGATATTCAGATATTTAGATACCCCTCCCTCCAAC
GGGTTACAAATGTTTATTTTATATATATATATATTCTTTCGCAGCAGTAA
TTTAGATGAAAGGAGACAAAATTCTGCAAATGATGGAATCGAATATCATA
AATATCCTTGATGTTGATGACAGATTCTTACTTGTGAAAGGAGCGCCTGT
GCTAACTTCAGTTCAAAGACACTGCTTAAGGTCCAGCTGCCCTGCATTCC
AAATTGCAAGTGATGAGTACGCAAAAATCTCAAGTAATCTGTCAAGCCGA
TTCATCCAACAGCGTCAACAATGTTGCTGAAAACTAGCATCGTTTTGCAA
AGCCGGAATGATAAAATCCGATGAGAATCAAACATCAGAGCCTGGACAAT
TTTGAAACTTATGGTGAACATATGTGTTGAAAAAATCCCAACAATATTTG
TACAAATGATTTTCTTTGACTTTTGTGTTTGCCGTATTGTTTCTTAATGG
CTTGCTCCATGTTGAGCTTTGTCCAATTGTATAAAATTTCAAAAATGTTA
TGATTAATATATTTTTAAAGCGTCGGTTTCCGGAGCCGAAGATTGAG
back to top

protein sequence of SMED30027800-orf-1

>SMED30027800-orf-1 ID=SMED30027800-orf-1|Name=SMED30027800-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=437bp
MKSHIKYHNGDFVMLDLLSNSDLNVKKAILSSSELSRSQMRDLFKSFPEL
AELFFSESDCNTDKFKNLINNLKSEHGFPEQISFVGGKFIKTHIDKISEH
LQTESESDIMFNLGLLDFIQMSKTDTLFHSLLTQPNSPSKLIDIIFYINY
LNLKGTLAYISNATFDEYVKNYLRNCFLMHSITNIESSHSLGRDNIETWG
PEMINMIPSSSYYFANCKERLLKLRQLNLSREIDKIHNIISPNTISEINN
FLETVEVALPKKVDQLKALSKLGNKINEFSIESNFPDIDKAKRFLYFIIR
DKKNLLVNNRFYFRISRNCSKICSANMSACITEIIDYLSPYITSVKDNQT
VNTSVSATVENVSESVDPLLEVPSSPVTDTETFESPLKVDSETLKRKLSV
DIDDNQSTTIVTNDIQQDVPQPKIIKKTRRNTVKPK*
back to top

protein sequence of SMED30027800-orf-2

>SMED30027800-orf-2 ID=SMED30027800-orf-2|Name=SMED30027800-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=1060bp
MSYFVDPIFSNRHSFTNKTIALKITMALNELFDLKAAMTFHPHDDFKYQN
NNYDCGPFICAYAMRISGEWQSFPESFVEIIRKEVHQFKLFPQQKDPKIS
GGGLPKFMEIIKRNGVKKISSASQAFLLKQNSCVSSLLIEWFKNKNNTTV
LSPELTSKVIAQNNRYIRENVTFKQFSGIEHVISVIPNDMNWGLYLFSLV
SGISYIFNFRNRTLTERLIGIGENMTDYLNKFFISDKKVTFNRDHNIDHI
SITLDDPHLFASAFIELVEMLIFENQISRTSISESLNSFKIQQANEICKN
LNLLNFKITEEITSKYFKILKLDDNFMLLNATMCSAILDDCTQYLNEYLN
YECVIKAQVIFAIVAPPKYREFLLIIDYNTDEYYILNPTTLSETENHLFI
CKSLRNKLNEIKETPGRVLNIGVFPHDIRGSGLVSKVLICAFIKHYVNDL
PLVNLNLREIGNTISSLLPVINEYKKEQNSCKTKFNKINKGNLNLEMRKI
KIAILIKKVLNFNVNQIIDVINEQFPNRIKTTHKPYLGNKTRPQKINKGI
LVRKFMTDMKWTVDKVFNNTNVSIRPTFQKIVLNFLIKSPFHGNWNNPLK
FCKRSKQALNLELFSNFEIMFQLKRADNTSPGIDGIQYRDLLLLDPEGKL
LTFLFNKIIVNKIIPDSWKSFKTLLTPKPNKDGKYDDVSSWRPIALLSVI
YKVFASCLASRLTYWINTNNLLHIGQKGGSRHDGCVEHNSILSAALEHSK
YSKNCPLAIAWLDIKDAFGSVPHDYMWSLLRFIGVGEDFTSILQLLYSDT
STFYSCGPILTPNIPIKQGVKQGCPISMILFALAINPVLEAVSRSDCEPF
MIGESPVKILAYADDIALIAKSVEDLQKITNIAVRTAAEIGFEYRPEKCG
YLQLPKVHIDSEILINNTKIKKLLSKEFYQYLGVPVGEEPDQSPYDILDK
AVSDTRKLANSELLGWQKLKAYKIFVHSRLIFPFRTREIKTGALSKSNGN
SNRSVNISSQLRGCFRKMLCLPNQSEVSYFYNATENGGQIALIFLMNITR
RPSPTFSDY*
back to top

protein sequence of SMED30027800-orf-3

>SMED30027800-orf-3 ID=SMED30027800-orf-3|Name=SMED30027800-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=277bp
MRGTIILTSDLRKTTSKVLHMALCDSYLSKWEKSCVSNFIASAVKLSPKI
NKAIFRSELSEFAWNFIHRARTNTLSIFAKHHNKGDKRLCRLCHAEDETM
SHAIQSCKVHLTLGAERHNDCLKLIASNLTKNSNLIVVVDHVCSLVPNSK
ERVDLMITDLSRKKIFLVDMKCPCDSVNNFEQVDLLNLRKYDSLKNQIQA
VKPDFKVELDTCVFGSLGSFPLKTSEILVKIGVKRTELKPLLKECALSNI
AHSARRWHFHKTGILVDPEKMYLFKN*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding
GO:0008234cysteine-type peptidase activity
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000418head
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR003653Peptidase_C48_C
IPR000477RT_dom
Vocabulary: biological process
TermDefinition
GO:0006508proteolysis