high mobility group-2
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30027770 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 17
Homology
BLAST of high mobility group-2 vs. Ensembl Human
Match: HMGB1 (high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]) HSP 1 Score: 130.568 bits (327), Expect = 8.162e-38 Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS 444 KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW+ Sbjct: 7 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 134
BLAST of high mobility group-2 vs. Ensembl Human
Match: HMGB1 (high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]) HSP 1 Score: 130.568 bits (327), Expect = 8.162e-38 Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS 444 KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW+ Sbjct: 7 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 134
BLAST of high mobility group-2 vs. Ensembl Human
Match: HMGB1 (high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]) HSP 1 Score: 132.109 bits (331), Expect = 1.236e-37 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. Ensembl Human
Match: HMGB1 (high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]) HSP 1 Score: 132.109 bits (331), Expect = 1.236e-37 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. Ensembl Human
Match: HMGB1 (high mobility group box 1 [Source:HGNC Symbol;Acc:HGNC:4983]) HSP 1 Score: 132.109 bits (331), Expect = 1.236e-37 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. Ensembl Celegans
Match: hmg-1.2 (High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]) HSP 1 Score: 112.849 bits (281), Expect = 1.586e-30 Identity = 68/173 (39.31%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 13 YNLVTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNKEAKEKYNLAMLEYK 525 Y + M G S Y + + EE+KKK P+ V TEISK SEKWK + D EK ++ LAQ D +RY E+ Y E R K KR KDP+ PK L+AFFF+S + R ++ +P++KVG +A+ LGKMW ++K YE+ + K++Y M YK Sbjct: 33 YQATPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVAAYGGEDAMR----KRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 201 HSP 2 Score: 46.595 bits (109), Expect = 4.007e-6 Identity = 27/73 (36.99%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE 267 P A SA+ Y+Q R E + +PD KV ++++ + WK + + K+ Y AQADK RY EM Y+ E Sbjct: 133 PKRALSAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAE 203
BLAST of high mobility group-2 vs. Ensembl Celegans
Match: hmg-1.2 (High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]) HSP 1 Score: 112.849 bits (281), Expect = 1.586e-30 Identity = 68/173 (39.31%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 13 YNLVTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNKEAKEKYNLAMLEYK 525 Y + M G S Y + + EE+KKK P+ V TEISK SEKWK + D EK ++ LAQ D +RY E+ Y E R K KR KDP+ PK L+AFFF+S + R ++ +P++KVG +A+ LGKMW ++K YE+ + K++Y M YK Sbjct: 33 YQATPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVAAYGGEDAMR----KRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 201 HSP 2 Score: 46.595 bits (109), Expect = 4.007e-6 Identity = 27/73 (36.99%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE 267 P A SA+ Y+Q R E + +PD KV ++++ + WK + + K+ Y AQADK RY EM Y+ E Sbjct: 133 PKRALSAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAE 203
BLAST of high mobility group-2 vs. Ensembl Celegans
Match: hmg-1.2 (High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]) HSP 1 Score: 108.227 bits (269), Expect = 9.780e-29 Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 13 YNLVTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEME--GYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNKEAKEKYNLAMLEYK 525 Y + M G S Y + + EE+KKK P+ V TEISK SEKWK + D EK ++ LAQ D +RY E+ Y E R K KR KDP+ PK L+AFFF+S + R ++ +P++KVG +A+ LGKMW ++K YE+ + K++Y M YK Sbjct: 32 YQATPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMR----KRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 202 HSP 2 Score: 46.595 bits (109), Expect = 4.069e-6 Identity = 27/73 (36.99%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE 267 P A SA+ Y+Q R E + +PD KV ++++ + WK + + K+ Y AQADK RY EM Y+ E Sbjct: 134 PKRALSAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAE 204
BLAST of high mobility group-2 vs. Ensembl Celegans
Match: hmg-1.2 (High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]) HSP 1 Score: 108.227 bits (269), Expect = 1.055e-28 Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 13 YNLVTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEME--GYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNKEAKEKYNLAMLEYK 525 Y + M G S Y + + EE+KKK P+ V TEISK SEKWK + D EK ++ LAQ D +RY E+ Y E R K KR KDP+ PK L+AFFF+S + R ++ +P++KVG +A+ LGKMW ++K YE+ + K++Y M YK Sbjct: 33 YQATPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMR----KRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 203 HSP 2 Score: 46.595 bits (109), Expect = 4.171e-6 Identity = 27/73 (36.99%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE 267 P A SA+ Y+Q R E + +PD KV ++++ + WK + + K+ Y AQADK RY EM Y+ E Sbjct: 135 PKRALSAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAE 205
BLAST of high mobility group-2 vs. Ensembl Celegans
Match: hmg-1.2 (High mobility group protein 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q09390]) HSP 1 Score: 108.227 bits (269), Expect = 1.055e-28 Identity = 68/175 (38.86%), Postives = 95/175 (54.29%), Query Frame = 1 Query: 13 YNLVTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEME--GYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNKEAKEKYNLAMLEYK 525 Y + M G S Y + + EE+KKK P+ V TEISK SEKWK + D EK ++ LAQ D +RY E+ Y E R K KR KDP+ PK L+AFFF+S + R ++ +P++KVG +A+ LGKMW ++K YE+ + K++Y M YK Sbjct: 33 YQATPRDMGKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQVTEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVSVAAYGGEDAMR----KRKRAKKDPHAPKRALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYK 203 HSP 2 Score: 46.595 bits (109), Expect = 4.171e-6 Identity = 27/73 (36.99%), Postives = 40/73 (54.79%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE 267 P A SA+ Y+Q R E + +PD KV ++++ + WK + + K+ Y AQADK RY EM Y+ E Sbjct: 135 PKRALSAFFFYSQDKRPEIQAGHPDWKVG--QVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNYKAE 205
BLAST of high mobility group-2 vs. Ensembl Fly
Match: Dsp1 (gene:FBgn0278608 transcript:FBtr0089259) HSP 1 Score: 141.739 bits (356), Expect = 5.565e-40 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KP G +AY + Q REE+KKK+PD V F E S+ +E+WK + DKEK++++ +A+ DK+RY EM+ Y P K +++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ + K KYE M + K +Y M EYK Sbjct: 168 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 332
BLAST of high mobility group-2 vs. Ensembl Fly
Match: Dsp1 (gene:FBgn0278608 transcript:FBtr0089260) HSP 1 Score: 141.739 bits (356), Expect = 5.565e-40 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KP G +AY + Q REE+KKK+PD V F E S+ +E+WK + DKEK++++ +A+ DK+RY EM+ Y P K +++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ + K KYE M + K +Y M EYK Sbjct: 168 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 332
BLAST of high mobility group-2 vs. Ensembl Fly
Match: Dsp1 (gene:FBgn0278608 transcript:FBtr0089261) HSP 1 Score: 141.739 bits (356), Expect = 5.565e-40 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KP G +AY + Q REE+KKK+PD V F E S+ +E+WK + DKEK++++ +A+ DK+RY EM+ Y P K +++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ + K KYE M + K +Y M EYK Sbjct: 168 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 332
BLAST of high mobility group-2 vs. Ensembl Fly
Match: Dsp1 (gene:FBgn0278608 transcript:FBtr0089262) HSP 1 Score: 141.739 bits (356), Expect = 5.672e-40 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KP G +AY + Q REE+KKK+PD V F E S+ +E+WK + DKEK++++ +A+ DK+RY EM+ Y P K +++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ + K KYE M + K +Y M EYK Sbjct: 169 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 333
BLAST of high mobility group-2 vs. Ensembl Fly
Match: Dsp1 (gene:FBgn0278608 transcript:FBtr0339766) HSP 1 Score: 141.739 bits (356), Expect = 5.672e-40 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KP G +AY + Q REE+KKK+PD V F E S+ +E+WK + DKEK++++ +A+ DK+RY EM+ Y P K +++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ + K KYE M + K +Y M EYK Sbjct: 169 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 333
BLAST of high mobility group-2 vs. Ensembl Zebrafish
Match: hmgb2a (high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]) HSP 1 Score: 135.961 bits (341), Expect = 2.113e-39 Identity = 79/172 (45.93%), Postives = 104/172 (60.47%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKY--NLAMLEYKNGVPSAKK 549 KP G S+Y + Q REE+KKKNP VNF+E SK SE+W+ +S KEK K+ +A+ DK RY +EM+ Y P K ++ KDPN PK P +AFF F ++HR VK NP +GDIAK LG+MWS+ K+KS YE+ + KEKY ++A K G P K Sbjct: 7 KPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEMAKTDKVRYDREMKNYVPPK-----GAKGGKKKKDPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKLKEKYEKDVAAYRAKGGKPDGAK 173
BLAST of high mobility group-2 vs. Ensembl Zebrafish
Match: hmgb2b (high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]) HSP 1 Score: 134.806 bits (338), Expect = 6.444e-39 Identity = 72/171 (42.11%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS--ECKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKS 552 KP G SAY + Q R+E+K+K+PD VNF+E SK SE+WK+++ +K K+ +A+ADK RY +EM+ Y P K K R+ KDPN PK P +AFF F +E+R TVK ++P +G+IAK LG++WS KD++ +E+ + +EKY + Y+ G ++K+ Sbjct: 8 KPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKADKVRYDREMKTYVPP----KGVGKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYRAGGGASKRG 174
BLAST of high mobility group-2 vs. Ensembl Zebrafish
Match: hmgb2b (high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]) HSP 1 Score: 134.806 bits (338), Expect = 6.444e-39 Identity = 72/171 (42.11%), Postives = 109/171 (63.74%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS--ECKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKS 552 KP G SAY + Q R+E+K+K+PD VNF+E SK SE+WK+++ +K K+ +A+ADK RY +EM+ Y P K K R+ KDPN PK P +AFF F +E+R TVK ++P +G+IAK LG++WS KD++ +E+ + +EKY + Y+ G ++K+ Sbjct: 8 KPKGKTSAYAFFVQTCRDEHKRKSPDVPVNFSEFSKKCSERWKSLNASDKVKFEDMAKADKVRYDREMKTYVPP----KGVGKTGRKKKDPNAPKRPPSAFFVFCSEYRPTVKSEHPNLTIGEIAKKLGELWSKQSSKDRAPFEQKAGKLREKYEKEVAAYRAGGGASKRG 174
BLAST of high mobility group-2 vs. Ensembl Zebrafish
Match: hmgb2a (high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]) HSP 1 Score: 133.265 bits (334), Expect = 8.290e-39 Identity = 74/154 (48.05%), Postives = 97/154 (62.99%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKY 501 KP G S+Y + Q REE+KKKNP VNF+E SK SE+W+ +S KEK K+ +A+ DK RY +EM+ Y P K ++ KDPN PK P +AFF F ++HR VK NP +GDIAK LG+MWS+ K+KS YE+ + KEKY Sbjct: 7 KPRGKTSSYAFFVQTCREEHKKKNPGTSVNFSEFSKKCSERWRTMSSKEKGKFEEMAKTDKVRYDREMKNYVPPK-----GAKGGKKKKDPNAPKRPPSAFFVFCSDHRPKVKGDNPGISIGDIAKKLGEMWSKLSPKEKSPYEQKAMKLKEKY 155
BLAST of high mobility group-2 vs. Ensembl Zebrafish
Match: hmgb3b (high mobility group box 3b [Source:ZFIN;Acc:ZDB-GENE-050417-290]) HSP 1 Score: 125.176 bits (313), Expect = 1.135e-35 Identity = 63/140 (45.00%), Postives = 83/140 (59.29%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK 465 KP G SAY + + REE+ KKNP VNF+E SK SE+WK +S KEK K+ LA+ DK RY +EM Y P KK +++ KDPN P+ P + FF F + R +K +NP +GD+AK LG MW+ D K Sbjct: 8 KPKGKMSAYAYFVKTCREEHNKKNPGVTVNFSEFSKKCSERWKTMSPKEKTKFEDLAKQDKARYDQEMMHYN-------PGKKGRKQKKDPNAPRRPPSGFFLFCAKQRPIIKAQNPSLGIGDVAKKLGGMWNNLSDSEK 140
BLAST of high mobility group-2 vs. Ensembl Xenopus
Match: hmgb2 (high mobility group box 2 [Source:NCBI gene;Acc:394499]) HSP 1 Score: 133.265 bits (334), Expect = 3.881e-38 Identity = 76/162 (46.91%), Postives = 100/162 (61.73%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSE--CKDKSKYEEMNKEAKEKYNLAMLEYK 525 KP G S+Y + Q REE+KKK+PD VNF E SK SE+WK +S KEK K+ +A+ DK RY +EM+ Y P +K ++ KDPN PK P +AFF F +EHR +K ++P +GD AK LG+MWSE KDK YE+ + KEKY + YK Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSKKCSERWKTMSAKEKSKFEEMAKNDKVRYEREMKTYIPPK-----GEKKGKKKKDPNAPKRPPSAFFLFCSEHRPQIKSESPGLSIGDTAKKLGEMWSEQTPKDKLPYEQKAAKLKEKYEKDVAAYK 164
BLAST of high mobility group-2 vs. Ensembl Xenopus
Match: cep170b (centrosomal protein 170B [Source:Xenbase;Acc:XB-GENE-5943417]) HSP 1 Score: 132.88 bits (333), Expect = 4.837e-38 Identity = 75/165 (45.45%), Postives = 101/165 (61.21%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK 525 + KKP G S+Y + Q REE+KKK+PD VNF E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E R +K ++P +GDIAK LG+MW + DK YE + KEKY + Y+ Sbjct: 5 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKSKFEDMAKADKVRYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEFRPKIKGEHPGSTIGDIAKKLGEMWNNTATDDKLPYERKAAKLKEKYEKDVAAYR 163
BLAST of high mobility group-2 vs. Ensembl Xenopus
Match: hmgb3 (high mobility group box 3 [Source:NCBI gene;Acc:448228]) HSP 1 Score: 123.635 bits (309), Expect = 1.353e-34 Identity = 71/157 (45.22%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 64 SAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEA--KEKYNLAMLEYKN 528 SAY + Q REE+KKKNP+ VNF E SK SE+WK +S KEK K++ LA+ADK RY +EM+ + P ++ KDPN PK P + FF F +E R +K NP +GD+AK LG+MW+ D K NK A KEKY + +YK+ Sbjct: 14 SAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRYDREMKDFGPVK--------KGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKYEKDVADYKS 162
BLAST of high mobility group-2 vs. Ensembl Xenopus
Match: hmgb3 (high mobility group box 3 [Source:NCBI gene;Acc:448228]) HSP 1 Score: 120.939 bits (302), Expect = 7.371e-34 Identity = 69/148 (46.62%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 64 SAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEA--KEKY 501 SAY + Q REE+KKKNP+ VNF E SK SE+WK +S KEK K++ LA+ADK RY +EM+ + P ++ KDPN PK P + FF F +E R +K NP +GD+AK LG+MW+ D K NK A KEKY Sbjct: 14 SAYAYFVQTCREEHKKKNPEIPVNFAEFSKKCSERWKTMSAKEKSKFDDLAKADKVRYDREMKDFGPVK--------KGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNNLNDGEKQPYNNKAAKLKEKY 153
BLAST of high mobility group-2 vs. Ensembl Xenopus
Match: abcb6 (ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:Xenbase;Acc:XB-GENE-1001119]) HSP 1 Score: 54.6842 bits (130), Expect = 2.960e-8 Identity = 27/83 (32.53%), Postives = 48/83 (57.83%), Query Frame = 1 Query: 286 SKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSE--CKDKSKYEEMNKEAKEKYNLAMLEYKN 528 +K KR +D N PKAPLT + F NE R+ ++ + P+ +I +++G WS+ +K Y + ++ KE+Y + +Y+N Sbjct: 88 GRKRKRSPRDNNAPKAPLTGYVRFMNERREQLRTERPDVPFPEITRIVGSEWSKLPAHEKQHYLDEAEKDKERYTKELQQYQN 170 HSP 2 Score: 50.447 bits (119), Expect = 7.028e-7 Identity = 25/75 (33.33%), Postives = 42/75 (56.00%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYE 261 +N P + Y+ + RE+ + + PD V F EI++I +W + EK+ Y A+ DK+RYTKE++ Y+ Sbjct: 97 DNNAPKAPLTGYVRFMNERREQLRTERPD--VPFPEITRIVGSEWSKLPAHEKQHYLDEAEKDKERYTKELQQYQ 169
BLAST of high mobility group-2 vs. Ensembl Mouse
Match: Hmgb1 (high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]) HSP 1 Score: 132.109 bits (331), Expect = 7.864e-38 Identity = 78/172 (45.35%), Postives = 107/172 (62.21%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 21 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 186
BLAST of high mobility group-2 vs. Ensembl Mouse
Match: Hmgb1 (high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]) HSP 1 Score: 132.109 bits (331), Expect = 8.488e-38 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. Ensembl Mouse
Match: Hmgb1 (high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]) HSP 1 Score: 132.109 bits (331), Expect = 8.488e-38 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. Ensembl Mouse
Match: Hmgb1 (high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]) HSP 1 Score: 132.109 bits (331), Expect = 8.488e-38 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. Ensembl Mouse
Match: Hmgb1 (high mobility group box 1 [Source:MGI Symbol;Acc:MGI:96113]) HSP 1 Score: 130.568 bits (327), Expect = 9.518e-38 Identity = 65/134 (48.51%), Postives = 90/134 (67.16%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS 444 KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW+ Sbjct: 7 KKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWN 134
BLAST of high mobility group-2 vs. UniProt/SwissProt
Match: sp|P26584|HMGB2_CHICK (High mobility group protein B2 OS=Gallus gallus OX=9031 GN=HMGB2 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 1.404e-39 Identity = 75/162 (46.30%), Postives = 99/162 (61.11%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSE--CKDKSKYEEMNKEAKEKYNLAMLEYK 525 KP G S+Y + Q REE+KKK+PD VNF E S+ SE+WK +S KEK K+ +A+ DK RY +EM+ Y P P + K + KDPN PK P +AFF F +EHR +K +P +GD AK LG+MWSE KDK YE+ + KEKY + Y+ Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPDSSVNFAEFSRKCSERWKTMSSKEKGKFEEMAKGDKARYDREMKNYVP------PKGEKKGKKKDPNAPKRPPSAFFLFCSEHRPKIKNDHPGLSIGDTAKKLGEMWSEQLAKDKQPYEQKAAKLKEKYEKDIAAYR 163
BLAST of high mobility group-2 vs. UniProt/SwissProt
Match: sp|Q24537|HMG2_DROME (High mobility group protein DSP1 OS=Drosophila melanogaster OX=7227 GN=Dsp1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 6.155e-39 Identity = 75/165 (45.45%), Postives = 103/165 (62.42%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KP G +AY + Q REE+KKK+PD V F E S+ +E+WK + DKEK++++ +A+ DK+RY EM+ Y P K +++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ + K KYE M + K +Y M EYK Sbjct: 176 DAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKT 340
BLAST of high mobility group-2 vs. UniProt/SwissProt
Match: sp|P63159|HMGB1_RAT (High mobility group protein B1 OS=Rattus norvegicus OX=10116 GN=Hmgb1 PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 5.938e-37 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. UniProt/SwissProt
Match: sp|B1MTB0|HMGB1_PLEMO (High mobility group protein B1 OS=Plecturocebus moloch OX=9523 GN=HMGB1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.938e-37 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. UniProt/SwissProt
Match: sp|A9RA84|HMGB1_PAPAN (High mobility group protein B1 OS=Papio anubis OX=9555 GN=HMGB1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 5.938e-37 Identity = 78/174 (44.83%), Postives = 108/174 (62.07%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK-NGVPSAKK 549 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ADK RY +EM+ Y P P + K++ KDPN PK P +AFF F +E+R +K ++P +GD+AK LG+MW + DK YE+ + KEKY + Y+ G P A K Sbjct: 5 DPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTYIP------PKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAK 172
BLAST of high mobility group-2 vs. TrEMBL
Match: I1ZIA1 (High mobility group-2 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 353.599 bits (906), Expect = 5.615e-122 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSKAHV 564 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNG PSAKKSKAHV Sbjct: 1 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGAPSAKKSKAHV 177
BLAST of high mobility group-2 vs. TrEMBL
Match: I1ZIJ2 (High mobility group-1 OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 197.208 bits (500), Expect = 2.939e-60 Identity = 100/175 (57.14%), Postives = 128/175 (73.14%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSKA 558 M +KKP GAK+ Y + Q VREE+KKK+PD ++ F+E SK SEKWK +S KEK+++ +A DK+RY KEM+ Y+P K KR+ KDPNKPK TAFFFFS+EHR+ +KE+NPE+KVGD+AKVLGKMW CKDKSKYEE K KE+YN + EYK+G P +KK+K Sbjct: 1 MVDKKPKGAKTPYACFVQVVREEHKKKHPDEQIVFSEFSKRCSEKWKEMSPKEKQRFMDIAAKDKERYLKEMDNYQPPAGT-----KNKRKIKDPNKPKGAWTAFFFFSDEHRKKIKEENPEYKVGDVAKVLGKMWEACKDKSKYEEQAKRDKERYNKELEEYKSGTPVSKKTKG 170
BLAST of high mobility group-2 vs. TrEMBL
Match: A0A5J4NYU2 (Uncharacterized protein OS=Paragonimus westermani OX=34504 GN=DEA37_0014045 PE=4 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.115e-42 Identity = 73/171 (42.69%), Postives = 114/171 (66.67%), Query Frame = 1 Query: 22 VTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGV 534 ++++ + KP GA SAY + Q +REE+KKK+P ++ F++ SK +E+WK ++ KEK+++ LA DK+R+ +EM Y P +K K ++ +DP P+ +AFFFF +EHR VKE NPE+KV D+AK LG+MW C+DK+KYE + ++ K++Y M +Y GV Sbjct: 1 MSRTKDKNKPKGAMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTSKEKKRFEDLAALDKERFNREMSEYVPPEGMKK--GKKRKVPRDPGLPRRAWSAFFFFCDEHRGKVKENNPEYKVADVAKELGRMWETCQDKAKYELLAQQDKQRYEEDMAKYHAGV 169
BLAST of high mobility group-2 vs. TrEMBL
Match: A0A2J7PFM2 (Uncharacterized protein OS=Cryptotermes secundus OX=105785 GN=B7P43_G15567 PE=4 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.043e-42 Identity = 83/175 (47.43%), Postives = 111/175 (63.43%), Query Frame = 1 Query: 40 NKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKD--KSKYEEMNKEAKEKYNLAMLEY----KNGVPSAK 546 + KP G +AY + Q REE+KKK+PD V F E SK +E+WK + DKEK++++ +A+ DKKRY EMEGY P + KK ++ KDPN PK L+AFF+F N+ R VK NPEF VGDIAK LG+ WS+ KSKYE M ++ K +Y+ M Y K G+P A+ Sbjct: 7 DAKPRGRMTAYAFFVQTCREEHKKKHPDENVIFAEFSKKCAERWKTMLDKEKKRFHEMAEKDKKRYDSEMEGYTPAKGEKARGKK-RKHVKDPNAPKRSLSAFFWFCNDERSKVKALNPEFGVGDIAKELGRRWSDVDPELKSKYEAMAEKDKARYDREMTAYKKRPKGGMPVAQ 180
BLAST of high mobility group-2 vs. TrEMBL
Match: A0A4S2M7M8 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_002095 PE=4 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 8.882e-42 Identity = 72/163 (44.17%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGV 534 +P GA SAY + Q +REE+KKK+P ++ F++ SK +E+WK ++ KEK+++ LA DK+R+ +EM Y P +K K ++ +DP P+ +AFFFF +EHR VKE NPEFKV D+AK LG+ W C+DK+KYE + ++ K++Y M++Y+ GV Sbjct: 9 RPKGAMSAYACFVQVIREEHKKKHPGEQIVFSDFSKKCAERWKLMTPKEKKRFEDLAALDKERFNREMSDYVPPEGMKK--GKKRKVPRDPGLPRRAWSAFFFFCDEHRGKVKENNPEFKVADVAKELGRQWEACQDKAKYELLAQQDKQRYEEDMVKYRAGV 169
BLAST of high mobility group-2 vs. Ensembl Cavefish
Match: hmgb2a (high mobility group box 2 [Source:NCBI gene;Acc:111195933]) HSP 1 Score: 130.568 bits (327), Expect = 1.953e-37 Identity = 79/175 (45.14%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSE--CKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSKAHV 564 KP G S+Y + Q REE+KKK+P VNF E SK +E+WK +S KEK K+ LA+ DK RY +EM+ Y P K ++ KDPN PK P +AFF F ++HR VK ++P +GDIAK LG+MWS+ KDK+ YE+ + KEKY + Y+ AK +KA V Sbjct: 7 KPRGKTSSYAFFVQTCREEHKKKHPGTSVNFAEFSKKCAERWKTMSPKEKTKFEDLAKNDKVRYDREMKTYIPPK-----GAKKGKKKKDPNAPKRPPSAFFVFCSDHRPKVKSEHPGISIGDIAKKLGEMWSKQSPKDKAPYEQKAMKLKEKYEKDVAAYR-----AKGAKADV 171
BLAST of high mobility group-2 vs. Ensembl Cavefish
Match: hmgb1a (high mobility group-T protein-like [Source:NCBI gene;Acc:103039534]) HSP 1 Score: 128.642 bits (322), Expect = 8.546e-37 Identity = 74/164 (45.12%), Postives = 101/164 (61.59%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYKNG 531 KP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ DK RY +EM+ Y P P + K+ KDPN PK P +AFF F E+R VKE+ P +GD+AK LG+MW + ++K YE+ + KEKY + Y+ G Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDTSVNFSEFSKKCSERWKTMSAKEKGKFEEMARLDKARYEREMKNYVP------PRGEKKKRFKDPNAPKRPPSAFFIFCAEYRPKVKEETPGLSIGDVAKKLGEMWNKTSAEEKQPYEKKAAKLKEKYEKDIAAYRKG 164
BLAST of high mobility group-2 vs. Ensembl Cavefish
Match: ENSAMXT00000044228.1 (high mobility group protein B2-like [Source:NCBI gene;Acc:103034313]) HSP 1 Score: 127.102 bits (318), Expect = 4.453e-36 Identity = 73/171 (42.69%), Postives = 103/171 (60.23%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKS 552 KP G SAY + + R+E KKK+P VNF + SK SE WK ++ EK+K+ LA+ADK RY +EM+ Y P K K R+ KDPN PK P +AFF F +EHR VK ++P +G+IAK LG+ WS+ KD+S +++ +EKY + Y++G AK+ Sbjct: 7 KPKGRTSAYAFFVLSSRDELKKKSPGTSVNFGKFSKKCSEDWKALTPSEKKKFEDLAKADKARYDEEMKSYVPP----KGMGKMGRKKKDPNAPKRPPSAFFIFCSEHRPAVKSEHPNLTIGEIAKKLGEKWSKLSTKDRSPFDQKAVLLREKYEKEVAAYRSGGSVAKRG 173
BLAST of high mobility group-2 vs. Ensembl Cavefish
Match: hmgb1b (high mobility group protein B1-like [Source:NCBI gene;Acc:103041093]) HSP 1 Score: 125.561 bits (314), Expect = 1.323e-35 Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS 444 +KP G S+Y + Q REE+KKK+P+ VNF+E SK SE+WK +S KEK K+ +A+ DK RY +EM+ Y P P + K+ KDPN PK P +AFF F ++R +K +NP +GDIAK LG+MW+ Sbjct: 6 RKPRGKMSSYAYFVQTCREEHKKKHPEASVNFSEFSKKCSERWKTMSPKEKSKFEDMAKQDKVRYEREMKNYIP------PKGEKKKRFKDPNAPKRPPSAFFIFCGDYRPKIKGENPGLSIGDIAKKLGEMWN 133
BLAST of high mobility group-2 vs. Ensembl Cavefish
Match: hmgb3a (high mobility group protein B3 [Source:NCBI gene;Acc:103036962]) HSP 1 Score: 114.775 bits (286), Expect = 2.523e-31 Identity = 65/164 (39.63%), Postives = 95/164 (57.93%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK--YEEMNKEAKEKYNLAMLEYKN 528 +KP G SAY + Q REE+K K+P+ VNF E SK S +WK +S KEK ++ +A+ DK RY +EM Y K+ K+ KDPN PK P + FF F ++HR +K + P +G++AK LG+MW+ D K Y + + K+KY + +YK+ Sbjct: 7 RKPKGKMSAYAYFVQTCREEHKLKSPEIPVNFAEFSKKCSVRWKAMSGKEKTRFEDMAKQDKVRYDQEMMHYT--------GKRGKK--KDPNAPKRPPSGFFIFCSDHRPKIKAQYPHMGIGEVAKKLGEMWNNLTDAHKQPYVMKSNKLKDKYQQDIADYKS 160
BLAST of high mobility group-2 vs. Ensembl Sea Lamprey
Match: hmgb2b (high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]) HSP 1 Score: 129.798 bits (325), Expect = 8.629e-38 Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 64 SAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYKN 528 S+Y + Q REE+KKKNP+ VNF E SK SE+WK +S+KEK ++ +A+ DK RY +EM+ Y P R R+ KDPN PK P +AFF + E+R V+ +NP +G IAK LG+MW + +KS YE + KEKY+ M Y++ Sbjct: 14 SSYAYFVQTCREEHKKKNPEASVNFAEFSKKCSERWKTMSEKEKTRFEDMAKVDKVRYDREMKTYVPPKGER-----GSRKKKDPNAPKRPPSAFFIYCAEYRSKVRAENPGLTIGSIAKKLGEMWNNAPADEKSIYERKTAKLKEKYDKDMASYRS 165
BLAST of high mobility group-2 vs. Ensembl Sea Lamprey
Match: hmgb2a (high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]) HSP 1 Score: 128.642 bits (322), Expect = 1.345e-37 Identity = 64/133 (48.12%), Postives = 85/133 (63.91%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS 444 KP G S+Y + Q REE+KKK+P+ VNF E SK SE+WK +S KEK ++ +A+ADK R+ +EM+ Y P K KR+ KDPN PK P +AFF F +EHR VK +P +G+IAK LG+MW Sbjct: 8 KPRGKMSSYAYFVQTCREEHKKKHPEASVNFAEFSKKCSERWKTMSPKEKARFEEMAKADKARFDREMKNYVPP--------KGKRKTKDPNAPKRPPSAFFVFCSEHRPKVKADHPGLGIGEIAKRLGEMWG 132
BLAST of high mobility group-2 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000005794.1 (pep scaffold:Pmarinus_7.0:GL478246:10745:21158:-1 gene:ENSPMAG00000005214.1 transcript:ENSPMAT00000005794.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 50.0618 bits (118), Expect = 1.613e-7 Identity = 33/121 (27.27%), Postives = 60/121 (49.59%), Query Frame = 1 Query: 130 VNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGY-EPETDNRKPSKKAKREAKDPNK----------------PKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW 441 V TE S +WK +S KEK+ Y+ + KK+Y + + + E TD + + + AK+ K P+ P++A F FS E R+ +++KNP+ ++ ++L ++W Sbjct: 318 VPSTERMHECSRQWKVLSPKEKDAYHKRCEQKKKQYEIDFQKFVENLTDEERERIQMEERAKEGGKMASLATAAALESAVDRPQRPISAMFIFSQEKRKKLRKKNPDLPESELTRLLARLW 438 HSP 2 Score: 47.3654 bits (111), Expect = 1.169e-6 Identity = 42/165 (25.45%), Postives = 82/165 (49.70%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNK--EAKEKYNLAMLEYKNGVP 537 P + Y + A R +Y K +PD + +++KI S K+K +++K+K KY Q DK+ + K M + + + + A R++ P KPK P ++ + ++ + +PE + ++ + L + WS DK + + + K E + ++ L + EY P Sbjct: 113 PKKPLTPYFRFFMAKRAKYAKMHPD--LTNLDLTKILSTKYKEMTEKKKLKYMEDYQRDKEEFDKAMAKFREQHPDL--VEVAVRKSDVPEKPKTPQQLWY---HHEKKAYMKLHPEMNLKEVNETLRRQWSVLPDKKRLKWIAKALELQRQHALELKEYICTHP 270
BLAST of high mobility group-2 vs. Ensembl Sea Lamprey
Match: smarce1 (SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]) HSP 1 Score: 44.2838 bits (103), Expect = 9.640e-6 Identity = 25/73 (34.25%), Postives = 37/73 (50.68%), Query Frame = 1 Query: 310 KDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEK--YNLAMLEY 522 K P P PL + +S + VK NP+ K+ +I K++G MW + ++ K E +N EK YN M Y Sbjct: 65 KAPKAPDKPLMPYMRYSRKVWDQVKAANPDLKLWEIGKIIGSMWRDLSEEDKQEYLNDYEAEKIEYNDLMKAY 137
BLAST of high mobility group-2 vs. Ensembl Yeast
Match: NHP6B (High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6B has a paralog, NHP6A, that arose from the whole genome duplication [Source:SGD;Acc:S000002157]) HSP 1 Score: 61.2326 bits (147), Expect = 5.946e-13 Identity = 28/75 (37.33%), Postives = 45/75 (60.00%), Query Frame = 1 Query: 283 PSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS--ECKDKSKYEEMNKEAKEKY 501 P K+ R KDPN PK L+A+ FF+NE+R V+ +NP+ G + ++LG+ W ++K YE + K++Y Sbjct: 13 PKKRTTRRKKDPNAPKRGLSAYMFFANENRDIVRSENPDVTFGQVGRILGERWKALTAEEKQPYESKAQADKKRY 87 HSP 2 Score: 53.5286 bits (127), Expect = 3.541e-10 Identity = 28/70 (40.00%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGY 258 P SAY+ + R+ + +NPD V F ++ +I E+WK ++ +EK+ Y AQADKKRY E E Y Sbjct: 27 PKRGLSAYMFFANENRDIVRSENPD--VTFGQVGRILGERWKALTAEEKQPYESKAQADKKRYESEKELY 94
BLAST of high mobility group-2 vs. Ensembl Yeast
Match: ABF2 (Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype in a yeast abf2 strain [Source:SGD;Acc:S000004676]) HSP 1 Score: 62.7734 bits (151), Expect = 9.770e-13 Identity = 50/154 (32.47%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKD--KSKYEEMNKEAKEKYN 504 P SAY +Y Q R ++ K+NP + EISKIA EKW+N+ KEKY +++K+ E + KAK+E + PK P F ++NE R V ++P+ D+ K++G W K KY + K+A ++YN Sbjct: 43 PKRPTSAYFLYLQDHRSQFVKENPTLRP--AEISKIAGEKWQNLEADIKEKYI----SERKKLYSEYQ-------------KAKKEFDEKLPPKKPAGPFIKYANEVRSQVFAQHPDKSQLDLMKIIGDKWQSLDQSIKDKYIQEYKKAIQEYN 177
BLAST of high mobility group-2 vs. Ensembl Yeast
Match: IXR1 (Transcriptional repressor that regulates hypoxic genes during normoxia; involved in the aerobic repression of genes such as COX5b, TIR1, and HEM13; binds DNA intrastrand cross-links formed by cisplatin; HMG (high mobility group box) domain containing protein which binds and bends cisplatin-modified DNA, blocking excision repair; IXR1 has a paralog, ABF2, that arose from the whole genome duplication [Source:SGD;Acc:S000001515]) HSP 1 Score: 60.4622 bits (145), Expect = 3.294e-11 Identity = 41/143 (28.67%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 43 KKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYE 471 K+PS SAY +++ ++R E ++ P+ KV E+SK+AS +WK ++D +K+ + + + ++Y + YE + P +P P F F+ E R TV ++NP+ + +I K++G+ W E K E Sbjct: 362 KRPS---SAYFLFSMSIRNELLQQFPEAKV--PELSKLASARWKELTDDQKKPFYEEFRTNWEKYRVVRDAYE--------------KTLPPKRPSGP---FIQFTQEIRPTVVKENPDKGLIEITKIIGERWRELDPAKKAE 482
BLAST of high mobility group-2 vs. Ensembl Yeast
Match: NHP6A (High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to chromosomes; functionally redundant with Nhp6Bp; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6A has a paralog, NHP6B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000006256]) HSP 1 Score: 54.299 bits (129), Expect = 1.556e-10 Identity = 30/77 (38.96%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 277 RKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKY 501 R+P K+ R+ KDPN PK L+A+ FF+NE+R V+ +NP+ G + K LG+ W ++K YE + K++Y Sbjct: 5 REPKKRTTRKKKDPNAPKRALSAYMFFANENRDIVRSENPDITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRY 81 HSP 2 Score: 53.1434 bits (126), Expect = 5.232e-10 Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGY 258 P A SAY+ + R+ + +NPD + F ++ K EKWK ++ +EK+ Y AQADKKRY E E Y Sbjct: 21 PKRALSAYMFFANENRDIVRSENPD--ITFGQVGKKLGEKWKALTPEEKQPYEAKAQADKKRYESEKELY 88
BLAST of high mobility group-2 vs. Ensembl Nematostella
Match: EDO36028 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJW6]) HSP 1 Score: 119.013 bits (297), Expect = 1.055e-33 Identity = 73/173 (42.20%), Postives = 111/173 (64.16%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSKA 558 KP GAKSAY + Q RE+ +++ +GK + + SK+++EKWKN+S++EKE + A DK+R+ +EM+ Y P KK K++ KDPNKPK L+A+F F N R VK+ NP G ++KVLG+MWS+ DK++Y++M K+ K +Y M +K+G AK++K Sbjct: 2 KPKGAKSAYNFFLQDQREKLQRE--EGKFSLADFSKVSAEKWKNMSEEEKETFVQKAGKDKERFKEEMQSYTPPPSEESGKKKRKKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQYQDMAKKDKVRYESEMKAFKDGKLPAKQNKT 172
BLAST of high mobility group-2 vs. Ensembl Nematostella
Match: EDO39305 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SAG5]) HSP 1 Score: 58.9214 bits (141), Expect = 5.684e-12 Identity = 28/66 (42.42%), Postives = 41/66 (62.12%), Query Frame = 1 Query: 325 PKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEY 522 PK ++A+ + N+ RQ +K+KNP V +++KV G+MW DKSK+EE K+KY M EY Sbjct: 1 PKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNLTDKSKWEEKAAIEKQKYVQRMKEY 66 HSP 2 Score: 51.9878 bits (123), Expect = 2.000e-9 Identity = 28/70 (40.00%), Postives = 44/70 (62.86%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGY 258 P A SAY+++ R+E K KNP ++ TE+SK+A E WKN++D K K+ A +K++Y + M+ Y Sbjct: 1 PKRAMSAYMLWLNDTRQEIKDKNPG--ISVTEVSKVAGEMWKNLTD--KSKWEEKAAIEKQKYVQRMKEY 66
BLAST of high mobility group-2 vs. Ensembl Nematostella
Match: EDO41032 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S5L8]) HSP 1 Score: 61.6178 bits (148), Expect = 1.852e-11 Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 286 SKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYK 525 +K K+ KD N PKAPLT + F NEHR+ V+ +NP+ ++ ++LG MWS+ K + E ++ KE+Y + EY+ Sbjct: 2 GRKRKKAHKDVNAPKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQLPTPQKQLFLEEAEKDKERYMKELEEYQ 83
BLAST of high mobility group-2 vs. Ensembl Nematostella
Match: EDO47230 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMY4]) HSP 1 Score: 57.3806 bits (137), Expect = 5.524e-10 Identity = 28/82 (34.15%), Postives = 48/82 (58.54%), Query Frame = 1 Query: 286 SKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECK--DKSKYEEMNKEAKEKYNLAMLEYK 525 K+ ++ +D N PKAPLT + F NE R+ V+ ++PE ++ K+LG WS+ DK +Y + + KE+Y + + Y+ Sbjct: 8 GKRRRKTLRDTNAPKAPLTGYVQFLNEQREKVRSEHPELPFPEVTKILGAEWSKMSQDDKQRYLDDAERDKERYIIELENYQ 89
BLAST of high mobility group-2 vs. Ensembl Nematostella
Match: EDO40495 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S799]) HSP 1 Score: 48.521 bits (114), Expect = 5.520e-7 Identity = 33/88 (37.50%), Postives = 47/88 (53.41%), Query Frame = 1 Query: 310 KDPNKPKAPLTAFFFFSNEHRQTVKE--KNPEFKVG--DIAKVLGKMWSEC--KDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSK 555 KDPN PK P AFF F + R ++E K+ +G ++ K L K W+ +K Y EM + KE+Y L M +Y + P +KK K Sbjct: 109 KDPNAPKKPANAFFMFCQQQRTVMQEDHKDATAVMGHHELTKSLAKEWNNLLPDEKKVYYEMYERDKERYELEMKQYSSDKPPSKKQK 196
BLAST of high mobility group-2 vs. Ensembl Medaka
Match: hmgb2a (high mobility group protein B2 [Source:NCBI gene;Acc:101157589]) HSP 1 Score: 133.265 bits (334), Expect = 1.891e-38 Identity = 77/170 (45.29%), Postives = 102/170 (60.00%), Query Frame = 1 Query: 22 VTKSMNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWS--ECKDKSKYEEMNKEAKEKYNLAMLEYK 525 +TK N KP G SAY + REE+KKK+P VNF E SK SE+WK +S KEK K++ LA+ DK RY +EM+ Y P K ++ KDPN PK P +AFF F ++HR +KE NP +GDIAK LG++W+ KDK+ YE + KEKY + Y+ Sbjct: 1 MTKDPN--KPRGKTSAYAYFVATCREEHKKKHPGTSVNFAEFSKKCSERWKTMSSKEKVKFDELAKTDKARYDREMKTYVPPK-----GAKKVKKKKDPNAPKRPPSAFFVFCSDHRPKIKEDNPGISIGDIAKKLGELWATQSAKDKAPYEAKAAKLKEKYEKDVAAYR 163
BLAST of high mobility group-2 vs. Ensembl Medaka
Match: hmgb1b (high mobility group protein B1 [Source:NCBI gene;Acc:101156596]) HSP 1 Score: 125.561 bits (314), Expect = 1.025e-35 Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 1 Query: 37 NNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYKN 528 + KKP G S+Y + Q REE+KKK+PD VNF+E SK SE+WK +S KEK K+ +A+ DK RY +EM+ Y P P + K+ KDPN PK P +AFF F + R +K ++P +GD AK LG+MW S ++K YE+ + KEKY+ ++ Y+ Sbjct: 4 DPKKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFEDMAKQDKVRYEREMKNYVP------PKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKIKSESPGLSIGDTAKKLGEMWNSSSAEEKQPYEKKAAKLKEKYDKDIVAYRT 163
BLAST of high mobility group-2 vs. Ensembl Medaka
Match: hmgb1a (high mobility group-T protein [Source:NCBI gene;Acc:101165167]) HSP 1 Score: 124.02 bits (310), Expect = 7.030e-35 Identity = 74/163 (45.40%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAK-REAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMW--SECKDKSKYEEMNKEAKEKYNLAMLEYK 525 KP G S+Y + Q REE+KKK+PD VNF E SK SE+WK +S KEK K+ +A+ DK RY +EM Y P+K AK ++ KDPN PK P +AFF F +E R VK ++P +GD+AK LG+MW + +DK YE+ + KEKY + Y+ Sbjct: 7 KPRGKMSSYAYFVQTCREEHKKKHPDASVNFAEFSKKCSERWKTMSAKEKGKFEDMARQDKVRYDREMMSYV-------PAKGAKTKKFKDPNAPKRPPSAFFIFCSEFRPKVKGESPGLTIGDVAKRLGEMWNSTSAEDKQPYEKKAAKLKEKYGKDIAAYR 162
BLAST of high mobility group-2 vs. Ensembl Medaka
Match: ubtf (upstream binding transcription factor [Source:NCBI gene;Acc:101156013]) HSP 1 Score: 57.3806 bits (137), Expect = 3.149e-9 Identity = 39/139 (28.06%), Postives = 63/139 (45.32%), Query Frame = 1 Query: 130 VNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGY---------------------------EPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK 465 V TE + S++WK + EK+ Y + KK Y EM + P T +KP+ KAK +P KPK P++A F F+ E RQ ++++ P+ ++ + L +MW++ DK K Sbjct: 313 VPSTERMMMCSQRWKLLKQHEKDAYQKRCEQRKKEYEIEMNRFLSSLSEEEQRRVLGEDKGGFKRGGRANSPAT--KKPASKAK---ANPEKPKRPISAMFIFAEEKRQKLQQERPDLSDSEVTRCLARMWNDLPDKKK 446
BLAST of high mobility group-2 vs. Ensembl Medaka
Match: ubtf (upstream binding transcription factor [Source:NCBI gene;Acc:101156013]) HSP 1 Score: 54.299 bits (129), Expect = 2.676e-8 Identity = 34/128 (26.56%), Postives = 64/128 (50.00%), Query Frame = 1 Query: 130 VNFTEISKIASEKWKNISDKEKEKY-----NVL----------AQADKKRYTKEMEG-YEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSK 465 V TE + S++WK + EK+ Y N+L ++ +++R E +G ++ P+ K +P KPK P++A F F+ E RQ ++++ P+ ++ + L +MW++ DK K Sbjct: 317 VPSTERMMMCSQRWKLLKQHEKDAYQKRCENILYLPFGPLQSLSEEEQRRVLGEDKGGFKRGGRANSPATKKPASKANPEKPKRPISAMFIFAEEKRQKLQQERPDLSDSEVTRCLARMWNDLPDKKK 444 HSP 2 Score: 46.9802 bits (110), Expect = 8.457e-6 Identity = 41/166 (24.70%), Postives = 82/166 (49.40%), Query Frame = 1 Query: 49 PSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNK--EAKEKYNLAMLEYKNGVPS 540 P + Y + R +Y K +P+ ++ +++KI S+K++ + DK+K+KY DK+ + M + E + + K+ + P KPK P ++ N ++ + +P+ DI LGK W++ DK + + ++K E ++ Y + +L N P+ Sbjct: 112 PKKPLTPYFRFFMEKRAKYAKLHPE--MSNLDLTKILSKKYRELPDKKKKKYVEDFLRDKETFVHSMSKFREEHPDLVETI-TKKGSNVPEKPKTPQQLWY---NHEKKAFLKTHPDATTKDIKDSLGKQWTQLPDKKRLKWISKSLEQQKAYEVRVLVVLNHSPA 271
BLAST of high mobility group-2 vs. Planmine SMEST
Match: SMESG000020771.1 (SMESG000020771.1) HSP 1 Score: 353.599 bits (906), Expect = 1.562e-125 Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSKAHV 564 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNG PSAKKSKAHV Sbjct: 1 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGAPSAKKSKAHV 177
BLAST of high mobility group-2 vs. Planmine SMEST
Match: SMESG000068286.1 (SMESG000068286.1) HSP 1 Score: 197.208 bits (500), Expect = 8.174e-64 Identity = 100/175 (57.14%), Postives = 128/175 (73.14%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEYKNGVPSAKKSKA 558 M +KKP GAK+ Y + Q VREE+KKK+PD ++ F+E SK SEKWK +S KEK+++ +A DK+RY KEM+ Y+P K KR+ KDPNKPK TAFFFFS+EHR+ +KE+NPE+KVGD+AKVLGKMW CKDKSKYEE K KE+YN + EYK+G P +KK+K Sbjct: 1 MVDKKPKGAKTPYACFVQVVREEHKKKHPDEQIVFSEFSKRCSEKWKEMSPKEKQRFMDIAAKDKERYLKEMDNYQPPAGT-----KNKRKIKDPNKPKGAWTAFFFFSDEHRKKIKEENPEYKVGDVAKVLGKMWEACKDKSKYEEQAKRDKERYNKELEEYKSGTPVSKKTKG 170 HSP 2 Score: 45.4394 bits (106), Expect = 8.133e-6 Identity = 30/84 (35.71%), Postives = 50/84 (59.52%), Query Frame = 1 Query: 46 KPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPETDNRKPSKKA 297 KP GA +A+ ++ R++ K++NP+ KV +++K+ + W+ DK K Y A+ DK+RY KE+E Y+ T K +K A Sbjct: 92 KPKGAWTAFFFFSDEHRKKIKEENPEYKVG--DVAKVLGKMWEACKDKSK--YEEQAKRDKERYNKELEEYKSGTPVSKKTKGA 171
BLAST of high mobility group-2 vs. Planmine SMEST
Match: SMESG000012056.1 (SMESG000012056.1) HSP 1 Score: 171.014 bits (432), Expect = 1.148e-53 Identity = 92/159 (57.86%), Postives = 113/159 (71.07%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEP---ETDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKY 501 M NKKP+G+KSAY + ++ E+YK +NPD K+N EISK+ S+KWKN+S+ EK ++ LA DKKRY EME YEP + K KK KR AKDPNKPK P+TAF FFSNE R +VKE NPEFK+GDIAK LG+ W EC +K KYE + K AK Y Sbjct: 1 MTNKKPTGSKSAYNCFMKSFIEKYKTENPDIKMNLGEISKLVSKKWKNLSEFEKNEFIELAAIDKKRYVDEMESYEPSEKDITKLKNKKKEKRAAKDPNKPKRPMTAFLFFSNEFRLSVKESNPEFKIGDIAKELGRKWKECIEKDKYENLAKSAKANY 159
BLAST of high mobility group-2 vs. Planmine SMEST
Match: SMESG000012070.1 (SMESG000012070.1) HSP 1 Score: 160.614 bits (405), Expect = 2.206e-49 Identity = 90/169 (53.25%), Postives = 121/169 (71.60%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE------TDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEY 522 M NKKPSG+KSAYI + Q+ RE+YK +NP+ K NF ISK+ +E+WK +S+ +K+++N +A DKKRY +EM YEP+ ++K +K+AKR +DPNKPK ++AF FSN+ R +VKE NPEFK+GD+AK LGKMW + +K KYE M K AKEKY M EY Sbjct: 1 MTNKKPSGSKSAYICFQQSFREKYKTENPEIKPNFINISKLGAEEWKKLSESDKKEFNEMATIDKKRYAEEMANYEPDEKDVKDIKDKKKAKRAKRAKRDPNKPKRFMSAFILFSNDFRLSVKESNPEFKIGDVAKELGKMWKDYSEKDKYENMAKSAKEKYENEMREY 169
BLAST of high mobility group-2 vs. Planmine SMEST
Match: SMESG000012065.1 (SMESG000012065.1) HSP 1 Score: 160.614 bits (405), Expect = 2.206e-49 Identity = 90/169 (53.25%), Postives = 121/169 (71.60%), Query Frame = 1 Query: 34 MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISDKEKEKYNVLAQADKKRYTKEMEGYEPE------TDNRKPSKKAKREAKDPNKPKAPLTAFFFFSNEHRQTVKEKNPEFKVGDIAKVLGKMWSECKDKSKYEEMNKEAKEKYNLAMLEY 522 M NKKPSG+KSAYI + Q+ RE+YK +NP+ K NF ISK+ +E+WK +S+ +K+++N +A DKKRY +EM YEP+ ++K +K+AKR +DPNKPK ++AF FSN+ R +VKE NPEFK+GD+AK LGKMW + +K KYE M K AKEKY M EY Sbjct: 1 MTNKKPSGSKSAYICFQQSFREKYKTENPEIKPNFINISKLGAEEWKKLSESDKKEFNEMATIDKKRYAEEMANYEPDEKDVKDIKDKKKAKRAKRAKRDPNKPKRFMSAFILFSNDFRLSVKESNPEFKIGDVAKELGKMWKDYSEKDKYENMAKSAKEKYENEMREY 169 The following BLAST results are available for this feature:
BLAST of high mobility group-2 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of high mobility group-2 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of high mobility group-2 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 4
BLAST of high mobility group-2 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 4
BLAST of high mobility group-2 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of high mobility group-2 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of high mobility group-2 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Cross References
External references for this transcript
Sequences
The following sequences are available for this feature:
transcript sequence >SMED30027770 ID=SMED30027770|Name=high mobility group-2|organism=Schmidtea mediterranea sexual|type=transcript|length=686bpback to top protein sequence of SMED30027770-orf-1 >SMED30027770-orf-1 ID=SMED30027770-orf-1|Name=SMED30027770-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=193bp MNNKKPSGAKSAYIIYTQAVREEYKKKNPDGKVNFTEISKIASEKWKNISback to top Aliases
The feature 'high mobility group-2' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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