SMED30027767

Overview
NameSMED30027767
Smed IDSMED30027767
Length (bp)1206
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30027767 (SMED30027767) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30027767 (SMED30027767) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30027767

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30027767h1SMcG0002462 SmedASXL_007305SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
nervous systemSMED30027767h1SMcG0002462 dd_Smed_v4_57748_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30027767h1SMcG0002462 dd_Smed_v4_57748_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30027767h1SMcG0002462 dd_Smed_v4_50289_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30027767h1SMcG0002462 dd_Smed_v6_57748_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
photoreceptor neuronSMED30027767h1SMcG0002462 SMED30027767smed_20140614PMID:22884275
Lapan et al., 2012		whole organism asexual adult colorimetric in situ hybridization evidence
head regionSMED30027767h1SMcG0002462 OX_Smed_1.0.11026ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
reproductive organSMED30027767h1SMcG0002462 Contig19948newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30027767h1SMcG0002462 Contig19948uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30027767h1SMcG0002460 Contig19948newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30027767h1SMcG0002460 Contig19948uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30027767h1SMcG0002461 Contig19948newmark_estsPMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
reproductive organSMED30027767h1SMcG0002461 Contig19948uc_Smed_v2PMID:28434803
Rouhana et al., 2017		whole organism adult hermaphrodite RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of SMED30027767 vs. Ensembl Human
Match: BEST1 (bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703])

HSP 1 Score: 147.132 bits (370), Expect = 2.269e-38
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T +E +  E ++L +N          FWVP  W + +  K ++ G I DP  + SL  E+  LR Q  +L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFT  QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  + +   +  P +
Sbjct:  163 MTPAEHKQLEKLSLPHNM---------FWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRM 332
[Close]
BLAST of SMED30027767 vs. Ensembl Human
Match: BEST1 (bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703])

HSP 1 Score: 146.747 bits (369), Expect = 2.986e-38
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T +E +  E ++L +N          FWVP  W + +  K ++ G I DP  + SL  E+  LR Q  +L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFT  QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  + +   +  P +
Sbjct:  103 MTPAEHKQLEKLSLPHNM---------FWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRM 272
[Close]
BLAST of SMED30027767 vs. Ensembl Human
Match: BEST2 (bestrophin 2 [Source:HGNC Symbol;Acc:HGNC:17107])

HSP 1 Score: 134.035 bits (336), Expect = 4.874e-34
Identity = 74/179 (41.34%), Postives = 102/179 (56.98%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I +PLVYTQVV IA+YSYFL  L   QF+DP Q    H++D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSNLAAQARREGRIRDNSALKLLLEELNVFRGKCGMLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQFLDPAQGYKDHDLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Human
Match: BEST2 (bestrophin 2 [Source:HGNC Symbol;Acc:HGNC:17107])

HSP 1 Score: 134.035 bits (336), Expect = 4.874e-34
Identity = 74/179 (41.34%), Postives = 102/179 (56.98%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I +PLVYTQVV IA+YSYFL  L   QF+DP Q    H++D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSNLAAQARREGRIRDNSALKLLLEELNVFRGKCGMLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQFLDPAQGYKDHDLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Human
Match: BEST2 (bestrophin 2 [Source:HGNC Symbol;Acc:HGNC:17107])

HSP 1 Score: 134.035 bits (336), Expect = 4.874e-34
Identity = 74/179 (41.34%), Postives = 102/179 (56.98%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I +PLVYTQVV IA+YSYFL  L   QF+DP Q    H++D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSNLAAQARREGRIRDNSALKLLLEELNVFRGKCGMLFHYDWISVPLVYTQVVTIALYSYFLACLIGRQFLDPAQGYKDHDLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Celegans
Match: best-4 (Bestrophin homolog [Source:UniProtKB/TrEMBL;Acc:O17205])

HSP 1 Score: 122.479 bits (306), Expect = 2.753e-30
Identity = 63/181 (34.81%), Postives = 104/181 (57.46%), Query Frame = -2 
Query:  309 EPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGH--EVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFID 845
            + ++W PIQW   ++      G I+D      L +++ E R ++ NL I+  + IPLVYTQVV +AV +YF++ LF  QF++    I G   ++D Y P+ T  Q +F++GWLKV+  ++NP G+DDEDF+T+ +++ NL + +   + +   YP+L +         D   ED  P  +D
Sbjct:  178 QSKYWQPIQWLFSLVTVAKDEGLIADSYLYVDLIDKMREFRTKILNLVIFDMVPIPLVYTQVVNLAVRTYFVLALFGRQFLENNNNIPGAKWKIDIYFPIMTSLQIVFIVGWLKVSEVMLNPLGEDDEDFETNWIIERNLQVGYAVVDQAYGRYPTLKR---------DPFWEDETPQTMD 349
[Close]
BLAST of SMED30027767 vs. Ensembl Celegans
Match: best-23 (Bestrophin homolog [Source:UniProtKB/TrEMBL;Acc:A5JYR2])

HSP 1 Score: 117.087 bits (292), Expect = 5.427e-29
Identity = 65/166 (39.16%), Postives = 96/166 (57.83%), Query Frame = -2 
Query:  423 IITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDIS 920
            ++T  E+  F++I +  +   K      +WVP+ W   ++ +CF  G ++    +  L + +E+ R     L IY  I IPLVYTQV  I+VY YFL  L   Q+  P +      VD Y+P+FTI QFLF +GWLKV   +M PFG DDEDF+ + +L+ NL++S
Sbjct:  154 LMTKEEMVMFKSILVHVDPHQK------WWVPLNWIQTMMVRCFEKGTLTHTNELRVLLDALEKYRNGFFQLFIYDWIAIPLVYTQVSTISVYGYFLFALIGRQY--PSKNENEEIVDVYVPIFTILQFLFYVGWLKVGEDLMFPFGADDEDFEFNYILERNLEVS 311
[Close]
BLAST of SMED30027767 vs. Ensembl Celegans
Match: best-2 (Bestrophin homolog 2 [Source:UniProtKB/Swiss-Prot;Acc:Q17529])

HSP 1 Score: 116.701 bits (291), Expect = 9.625e-29
Identity = 60/166 (36.14%), Postives = 95/166 (57.23%), Query Frame = -2 
Query:  375 YNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 872
            Y T+N  R   ++W+P  WA  + +K    G+I        +  E+   R  ++ +  Y  + +PL+Y Q+V +AV  YFLV + A Q V    ++V  EVD Y PV T  QF+F MGWLKV   ++NPFG+DD+DF+T+ ++D N+ +  +  + + +  P LLK
Sbjct:  174 YTTKNNSRLGKKYWIPANWALCMTYKARKDGYIESDYFKAQMEGEIRTWRTNIEWVCNYDWVPLPLMYPQLVCLAVNLYFLVSIIARQLVIEKHKMVD-EVDVYFPVMTFLQFIFYMGWLKVIEVMLNPFGEDDDDFETNALIDRNITMGLKMVDNTMKT-PELLK 337
[Close]
BLAST of SMED30027767 vs. Ensembl Celegans
Match: best-3 (Bestrophin homolog [Source:UniProtKB/TrEMBL;Acc:O17206])

HSP 1 Score: 116.316 bits (290), Expect = 4.535e-28
Identity = 60/185 (32.43%), Postives = 102/185 (55.14%), Query Frame = -2 
Query:  375 IITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVG---HEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 920
            ++T  E+  FE+I   +          ++W P+ W   +I      G IS       L E++ + R  + +L ++  + +PLVYTQVV +AV SYFL+ LF  Q++ P    +      +D Y+P+ ++ QF+F +GW+KVA  ++NP G+DD+DF+ + +LD NL +     + +   YP+L K
Sbjct:  162 LMTEKEMAEFESIPSPH---------AKYWQPMHWLFSMITLARDEGMISSDIIYVDLMEKMRQFRVNILSLTLFDWVPVPLVYTQVVHLAVRSYFLIALFGRQYLHPESNRLNDFKQTIDLYVPIMSLLQFIFFIGWMKVAEVLLNPLGEDDDDFECNWILDRNLQVGLMVVDTAYNRYPTLEK 337
[Close]
BLAST of SMED30027767 vs. Ensembl Celegans
Match: best-5 (Bestrophin homolog 5 [Source:UniProtKB/Swiss-Prot;Acc:P34319])

HSP 1 Score: 114.39 bits (285), Expect = 8.450e-28
Identity = 64/206 (31.07%), Postives = 108/206 (52.43%), Query Frame = -2 
Query:  327 GIRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDN 944
            G+R+ F  +  V++        L+     K RY+ ++WV   WA  +++       I       ++ +E+ + R  +  + +Y  + IPL+Y Q+V +AV++YF + +F  QF          EVD YIP  TI +F+F MGWLKVAM ++NPFG+D +DF  + ++D NL I   S + + +  P  +KP +        +D D+
Sbjct:  189 GVRRRFPTLEAVAQAGIMLPHELEKFNSIKSRYQ-KYWVSFNWALELLNVAKTEKSIDGDNARNAIAQEISKFRSALTTVSMYDWVPIPLMYPQLVNMAVHTYFFLCIFTRQFFISADAHNKTEVDLYIPFMTIIEFIFYMGWLKVAMELLNPFGEDADDFDCNLLIDRNLAIGLTSVDDAYDQLPE-VKPDVFTGGSVKPLDSDD 392
[Close]
BLAST of SMED30027767 vs. Ensembl Fly
Match: Best1 (gene:FBgn0040238 transcript:FBtr0082183)

HSP 1 Score: 133.65 bits (335), Expect = 1.146e-33
Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = -2 
Query:  375 TRNKIRYEP-EFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGH-----EVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 866
            T NK    P + W+PI WA+ II +    G I D   + ++ +E+ + R Q   L  Y  I +PLVYTQVV +AVYSYFL      Q+ D   ++VG+     +VD Y PVFT  QF F MGWLKVA  ++NPFG+DD+DF+ + M+D NL +S+   +     +P LLK
Sbjct:  174 TMNKAFPRPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVYTQVVTLAVYSYFLTCCMGQQWTD--GKVVGNTTYLNKVDLYFPVFTTLQFFFYMGWLKVAESLINPFGEDDDDFEVNWMVDRNLQVSYLIVDEMHHDHPELLK 341
[Close]
BLAST of SMED30027767 vs. Ensembl Fly
Match: Best1 (gene:FBgn0040238 transcript:FBtr0114590)

HSP 1 Score: 133.65 bits (335), Expect = 1.166e-33
Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = -2 
Query:  375 TRNKIRYEP-EFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGH-----EVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 866
            T NK    P + W+PI WA+ II +    G I D   + ++ +E+ + R Q   L  Y  I +PLVYTQVV +AVYSYFL      Q+ D   ++VG+     +VD Y PVFT  QF F MGWLKVA  ++NPFG+DD+DF+ + M+D NL +S+   +     +P LLK
Sbjct:  174 TMNKAFPRPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVYTQVVTLAVYSYFLTCCMGQQWTD--GKVVGNTTYLNKVDLYFPVFTTLQFFFYMGWLKVAESLINPFGEDDDDFEVNWMVDRNLQVSYLIVDEMHHDHPELLK 341
[Close]
BLAST of SMED30027767 vs. Ensembl Fly
Match: Best1 (gene:FBgn0040238 transcript:FBtr0337020)

HSP 1 Score: 133.65 bits (335), Expect = 1.294e-33
Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = -2 
Query:  375 TRNKIRYEP-EFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGH-----EVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 866
            T NK    P + W+PI WA+ II +    G I D   + ++ +E+ + R Q   L  Y  I +PLVYTQVV +AVYSYFL      Q+ D   ++VG+     +VD Y PVFT  QF F MGWLKVA  ++NPFG+DD+DF+ + M+D NL +S+   +     +P LLK
Sbjct:  174 TMNKAFPRPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVYTQVVTLAVYSYFLTCCMGQQWTD--GKVVGNTTYLNKVDLYFPVFTTLQFFFYMGWLKVAESLINPFGEDDDDFEVNWMVDRNLQVSYLIVDEMHHDHPELLK 341
[Close]
BLAST of SMED30027767 vs. Ensembl Fly
Match: Best1 (gene:FBgn0040238 transcript:FBtr0306023)

HSP 1 Score: 133.65 bits (335), Expect = 1.324e-33
Identity = 73/170 (42.94%), Postives = 101/170 (59.41%), Query Frame = -2 
Query:  375 TRNKIRYEP-EFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGH-----EVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 866
            T NK    P + W+PI WA+ II +    G I D   + ++ +E+ + R Q   L  Y  I +PLVYTQVV +AVYSYFL      Q+ D   ++VG+     +VD Y PVFT  QF F MGWLKVA  ++NPFG+DD+DF+ + M+D NL +S+   +     +P LLK
Sbjct:  174 TMNKAFPRPSKHWLPIVWAASIITRARKEGRIRDDFAVKTIIDELNKFRGQCGLLISYDTISVPLVYTQVVTLAVYSYFLTCCMGQQWTD--GKVVGNTTYLNKVDLYFPVFTTLQFFFYMGWLKVAESLINPFGEDDDDFEVNWMVDRNLQVSYLIVDEMHHDHPELLK 341
[Close]
BLAST of SMED30027767 vs. Ensembl Fly
Match: Best3 (gene:FBgn0036492 transcript:FBtr0075618)

HSP 1 Score: 130.183 bits (326), Expect = 6.665e-33
Identity = 67/186 (36.02%), Postives = 109/186 (58.60%), Query Frame = -2 
Query:  375 TFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 932
            T+ ++I V  + A E   +K     K    P++W+PI WA+ I+ +    G I D  ++ S+ +E+ + R     L  Y  I +PLVYTQVV +AVYSYF+  +F  Q++D   +   + V +Y P+F+  +F F MGWLKVA  ++ PFGDDD+DF+ + ++D NL +S+   +     +P L++
Sbjct:  154 TYDQLIEVGLLNANEANIMK-AMDVKFPKHPKYWMPIVWAASIVTRARKEGRIWDDFSLKSMIDELNKFRAGCNMLIHYDTISVPLVYTQVVTLAVYSYFVASIFGHQWIDRDIKHYNNIVSYYFPLFSTLEFFFFMGWLKVAETLICPFGDDDDDFELNWLIDRNLQVSYLIVDEMHNDHPQLVR 338
[Close]
BLAST of SMED30027767 vs. Ensembl Zebrafish
Match: best1 (bestrophin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-214])

HSP 1 Score: 147.902 bits (372), Expect = 1.135e-40
Identity = 75/177 (42.37%), Postives = 107/177 (60.45%), Query Frame = -2 
Query:  390 IITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 920
            ++T  E+R  + +   +N         +FWVP  W   +  +    G I++   MT++  E+  LR Q   L  Y  I +PLVYTQVV +AVYS+FL  L   QF+DP Q   GH +DFY+PVFT+ QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S    +EMY
Sbjct:    2 LMTAEELRQLQELPSPHN---------KFWVPCMWFVSLAMRARSEGRINNDVAMTAILNELNTLRSQCMRLYGYDWISLPLVYTQVVTVAVYSFFLTCLIGRQFLDPAQGYPGHNLDFYLPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNWLVDRNLQVSLLS---VDEMY 166
[Close]
BLAST of SMED30027767 vs. Ensembl Zebrafish
Match: best1 (bestrophin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-214])

HSP 1 Score: 148.673 bits (374), Expect = 7.938e-39
Identity = 75/177 (42.37%), Postives = 107/177 (60.45%), Query Frame = -2 
Query:  390 IITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 920
            ++T  E+R  + +   +N         +FWVP  W   +  +    G I++   MT++  E+  LR Q   L  Y  I +PLVYTQVV +AVYS+FL  L   QF+DP Q   GH +DFY+PVFT+ QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S    +EMY
Sbjct:  162 LMTAEELRQLQELPSPHN---------KFWVPCMWFVSLAMRARSEGRINNDVAMTAILNELNTLRSQCMRLYGYDWISLPLVYTQVVTVAVYSFFLTCLIGRQFLDPAQGYPGHNLDFYLPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNWLVDRNLQVSLLS---VDEMY 326
[Close]
BLAST of SMED30027767 vs. Ensembl Zebrafish
Match: best2 (bestrophin 2 [Source:ZFIN;Acc:ZDB-GENE-090312-127])

HSP 1 Score: 144.436 bits (363), Expect = 2.012e-38
Identity = 75/179 (41.90%), Postives = 105/179 (58.66%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FE++   YN         ++W+P  W + +       G I D  T   L EE+   R +   L  Y  I +PLVYTQVV +AVYS+FLV L   QF+DPGQ   GH++D Y+P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  165 MTREERKKFESLHSPYN---------KYWIPCVWFTNLAAAARCEGRIKDDNTYKLLLEELNNFRGKCSMLFHYDMISVPLVYTQVVTLAVYSFFLVCLIGRQFLDPGQGYPGHDLDLYVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNFQVSMM---AVDEMYGDL 331
[Close]
BLAST of SMED30027767 vs. Ensembl Zebrafish
Match: best4 (bestrophin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-6])

HSP 1 Score: 120.553 bits (301), Expect = 2.653e-30
Identity = 62/181 (34.25%), Postives = 99/181 (54.70%), Query Frame = -2 
Query:  375 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 917
            +T  E+R   ++   +N         ++W+P+ W + +  +    G + D   +  L +E+   R +   L  Y  I IPLVYTQVV +AVYS+F   L   QFV P        +D YIP+FT+ +F F  GWLKV   ++NPFG+DD+DF+T++++D N+ +S  + +   +  P L K
Sbjct:  163 MTTDELRKLNHLYSDFN---------KYWMPLAWFANLASQARKEGRVKDDIALRLLMDELNNYRSKCSMLFHYDWISIPLVYTQVVTVAVYSFFTFSLIGRQFVKPASS--EEHLDLYIPIFTLLEFFFYAGWLKVGELIINPFGEDDDDFETNQLIDRNIQVSMLAVDDMHQNLPPLEK 332
[Close]
BLAST of SMED30027767 vs. Ensembl Zebrafish
Match: best4 (bestrophin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-6])

HSP 1 Score: 117.087 bits (292), Expect = 2.982e-29
Identity = 58/164 (35.37%), Postives = 92/164 (56.10%), Query Frame = -2 
Query:  426 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDI 917
            +T  E+R   ++   +N         ++W+P+ W + +  +    G + D   +  L +E+   R +   L  Y  I IPLVYTQVV +AVYS+F   L   QFV P        +D YIP+FT+ +F F  GWLKV   ++NPFG+DD+DF+T++++D N+ +
Sbjct:  163 MTTDELRKLNHLYSDFN---------KYWMPLAWFANLASQARKEGRVKDDIALRLLMDELNNYRSKCSMLFHYDWISIPLVYTQVVTVAVYSFFTFSLIGRQFVKPASS--EEHLDLYIPIFTLLEFFFYAGWLKVGELIINPFGEDDDDFETNQLIDRNIQV 315
[Close]
BLAST of SMED30027767 vs. Ensembl Xenopus
Match: best1 (bestrophin 1 [Source:NCBI gene;Acc:100302038])

HSP 1 Score: 135.961 bits (341), Expect = 1.277e-35
Identity = 67/155 (43.23%), Postives = 94/155 (60.65%), Query Frame = -2 
Query:  375 EFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 839
            +FWVP  W + +       G I D   +  + +E+  LR Q   L  Y  I +PLVYTQVV +AVYS+FL  L   QF+DP +   GH++D Y+PVFT+ QF F  GWLKVA  ++NPFG DD+DF+T+ ++D NL +S  + +   +  P L K
Sbjct:  180 KFWVPCVWFANLAVTARSEGRIRDNVVLQLILKELNSLRTQCGRLYGYDWISVPLVYTQVVTVAVYSFFLACLIGRQFLDPQKGYPGHDMDLYVPVFTLLQFFFYAGWLKVAEQLINPFGQDDDDFETNWLIDRNLQVSLLAVDEMHQDVPPLEK 334
[Close]
BLAST of SMED30027767 vs. Ensembl Xenopus
Match: phka1p1 (phosphorylase kinase, alpha 1 pseudogene 1 [Source:Xenbase;Acc:XB-GENE-1012252])

HSP 1 Score: 137.502 bits (345), Expect = 1.393e-35
Identity = 74/176 (42.05%), Postives = 100/176 (56.82%), Query Frame = -2 
Query:  390 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 917
            +T  E + FEN+   YN         ++WVP  W   +  +    G I D  +   L EE+   R     L  Y  I +PLVYTQVV IAVYS+FL  L   QF+DP +   GHE+D Y+PVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ + ++D N  +S     A +EMY
Sbjct:  115 MTRLERKKFENLQSSYN---------KYWVPCVWFCNLASQARSEGRIRDDHSFKMLMEELNTFRGNCGMLFHYDWISVPLVYTQVVTIAVYSFFLTCLIGRQFLDPARGYPGHELDLYVPVFTLLQFFFYAGWLKVAEQLINPFGEDDDDFEINFLIDRNFQVSML---AVDEMY 278
[Close]
BLAST of SMED30027767 vs. Ensembl Xenopus
Match: phka1p1 (phosphorylase kinase, alpha 1 pseudogene 1 [Source:Xenbase;Acc:XB-GENE-1012252])

HSP 1 Score: 137.117 bits (344), Expect = 1.504e-35
Identity = 74/176 (42.05%), Postives = 100/176 (56.82%), Query Frame = -2 
Query:  390 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 917
            +T  E + FEN+   YN         ++WVP  W   +  +    G I D  +   L EE+   R     L  Y  I +PLVYTQVV IAVYS+FL  L   QF+DP +   GHE+D Y+PVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ + ++D N  +S     A +EMY
Sbjct:  114 MTRLERKKFENLQSSYN---------KYWVPCVWFCNLASQARSEGRIRDDHSFKMLMEELNTFRGNCGMLFHYDWISVPLVYTQVVTIAVYSFFLTCLIGRQFLDPARGYPGHELDLYVPVFTLLQFFFYAGWLKVAEQLINPFGEDDDDFEINFLIDRNFQVSML---AVDEMY 277
[Close]
BLAST of SMED30027767 vs. Ensembl Xenopus
Match: phka1p1 (phosphorylase kinase, alpha 1 pseudogene 1 [Source:Xenbase;Acc:XB-GENE-1012252])

HSP 1 Score: 137.117 bits (344), Expect = 1.630e-35
Identity = 74/176 (42.05%), Postives = 100/176 (56.82%), Query Frame = -2 
Query:  390 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 917
            +T  E + FEN+   YN         ++WVP  W   +  +    G I D  +   L EE+   R     L  Y  I +PLVYTQVV IAVYS+FL  L   QF+DP +   GHE+D Y+PVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ + ++D N  +S     A +EMY
Sbjct:  114 MTRLERKKFENLQSSYN---------KYWVPCVWFCNLASQARSEGRIRDDHSFKMLMEELNTFRGNCGMLFHYDWISVPLVYTQVVTIAVYSFFLTCLIGRQFLDPARGYPGHELDLYVPVFTLLQFFFYAGWLKVAEQLINPFGEDDDDFEINFLIDRNFQVSML---AVDEMY 277
[Close]
BLAST of SMED30027767 vs. Ensembl Xenopus
Match: phka1p1 (phosphorylase kinase, alpha 1 pseudogene 1 [Source:Xenbase;Acc:XB-GENE-1012252])

HSP 1 Score: 137.117 bits (344), Expect = 1.630e-35
Identity = 74/176 (42.05%), Postives = 100/176 (56.82%), Query Frame = -2 
Query:  390 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 917
            +T  E + FEN+   YN         ++WVP  W   +  +    G I D  +   L EE+   R     L  Y  I +PLVYTQVV IAVYS+FL  L   QF+DP +   GHE+D Y+PVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ + ++D N  +S     A +EMY
Sbjct:  114 MTRLERKKFENLQSSYN---------KYWVPCVWFCNLASQARSEGRIRDDHSFKMLMEELNTFRGNCGMLFHYDWISVPLVYTQVVTIAVYSFFLTCLIGRQFLDPARGYPGHELDLYVPVFTLLQFFFYAGWLKVAEQLINPFGEDDDDFEINFLIDRNFQVSML---AVDEMY 277
[Close]
BLAST of SMED30027767 vs. Ensembl Mouse
Match: Best1 (bestrophin 1 [Source:MGI Symbol;Acc:MGI:1346332])

HSP 1 Score: 151.369 bits (381), Expect = 3.537e-41
Identity = 78/179 (43.58%), Postives = 107/179 (59.78%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E +  + + L +NT         FWVP  W + +  K ++ G I D   + SL  EV  LR Q   L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFTI QFLF MGWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S +   +  P +
Sbjct:  163 MTHGEHKQLQKLGLPHNT---------FWVPWVWFANLSMKAYLGGRIRDTVLLQSLMNEVCTLRTQCGQLYAYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLNPNKDYPGHEMDLVVPVFTILQFLFYMGWLKVAEQLINPFGEDDDDFETNWIIDRNLQVSLLSVDGMHQNLPPM 332
[Close]
BLAST of SMED30027767 vs. Ensembl Mouse
Match: Best1 (bestrophin 1 [Source:MGI Symbol;Acc:MGI:1346332])

HSP 1 Score: 152.525 bits (384), Expect = 1.099e-40
Identity = 78/179 (43.58%), Postives = 107/179 (59.78%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E +  + + L +NT         FWVP  W + +  K ++ G I D   + SL  EV  LR Q   L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFTI QFLF MGWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S +   +  P +
Sbjct:  163 MTHGEHKQLQKLGLPHNT---------FWVPWVWFANLSMKAYLGGRIRDTVLLQSLMNEVCTLRTQCGQLYAYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLNPNKDYPGHEMDLVVPVFTILQFLFYMGWLKVAEQLINPFGEDDDDFETNWIIDRNLQVSLLSVDGMHQNLPPM 332
[Close]
BLAST of SMED30027767 vs. Ensembl Mouse
Match: Best2 (bestrophin 2 [Source:MGI Symbol;Acc:MGI:2387588])

HSP 1 Score: 135.191 bits (339), Expect = 1.090e-34
Identity = 76/179 (42.46%), Postives = 101/179 (56.42%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I IPLVYTQVV IAVYSYFL  L   QF+DP Q    H +D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSSLAAQARREGRIRDNSALKLLLEELNVFRSKCGMLFHYDWISIPLVYTQVVTIAVYSYFLACLIGRQFLDPAQGYKDHTLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Mouse
Match: Best2 (bestrophin 2 [Source:MGI Symbol;Acc:MGI:2387588])

HSP 1 Score: 135.191 bits (339), Expect = 1.090e-34
Identity = 76/179 (42.46%), Postives = 101/179 (56.42%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I IPLVYTQVV IAVYSYFL  L   QF+DP Q    H +D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSSLAAQARREGRIRDNSALKLLLEELNVFRSKCGMLFHYDWISIPLVYTQVVTIAVYSYFLACLIGRQFLDPAQGYKDHTLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Mouse
Match: Best2 (bestrophin 2 [Source:MGI Symbol;Acc:MGI:2387588])

HSP 1 Score: 135.191 bits (339), Expect = 1.090e-34
Identity = 76/179 (42.46%), Postives = 101/179 (56.42%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I IPLVYTQVV IAVYSYFL  L   QF+DP Q    H +D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSSLAAQARREGRIRDNSALKLLLEELNVFRSKCGMLFHYDWISIPLVYTQVVTIAVYSYFLACLIGRQFLDPAQGYKDHTLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. UniProt/SwissProt
Match: sp|O88870|BEST1_MOUSE (Bestrophin-1 OS=Mus musculus OX=10090 GN=Best1 PE=2 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 7.690e-40
Identity = 78/179 (43.58%), Postives = 107/179 (59.78%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E +  + + L +NT         FWVP  W + +  K ++ G I D   + SL  EV  LR Q   L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFTI QFLF MGWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S +   +  P +
Sbjct:  163 MTHGEHKQLQKLGLPHNT---------FWVPWVWFANLSMKAYLGGRIRDTVLLQSLMNEVCTLRTQCGQLYAYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLNPNKDYPGHEMDLVVPVFTILQFLFYMGWLKVAEQLINPFGEDDDDFETNWIIDRNLQVSLLSVDGMHQNLPPM 332
[Close]
BLAST of SMED30027767 vs. UniProt/SwissProt
Match: sp|Q8WMR7|BEST1_PIG (Bestrophin-1 (Fragment) OS=Sus scrofa OX=9823 GN=BEST1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.779e-38
Identity = 74/176 (42.05%), Postives = 109/176 (61.93%), Query Frame = -2 
Query:  390 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 917
            +T SE +  E ++L +N+         FW+P  W + +  K +I G I DP  + SL +E+  LR Q  +L  Y  I +PLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +P+FT  QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D +L +S     A +EM+
Sbjct:   10 MTPSEHKHLEKLSLPHNS---------FWMPWVWFANLSTKAWIGGRIRDPVLLQSLLDEMNTLRTQCGHLYAYDWISVPLVYTQVVTVAVYSFFLACLVGRQFLNPAKAYPGHEMDLVVPLFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWIVDRSLQVSL---SAVDEMH 173
[Close]
BLAST of SMED30027767 vs. UniProt/SwissProt
Match: sp|O76090|BEST1_HUMAN (Bestrophin-1 OS=Homo sapiens OX=9606 GN=BEST1 PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.090e-37
Identity = 74/179 (41.34%), Postives = 108/179 (60.34%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T +E +  E ++L +N          FWVP  W + +  K ++ G I DP  + SL  E+  LR Q  +L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFT  QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  + +   +  P +
Sbjct:  163 MTPAEHKQLEKLSLPHNM---------FWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLLAVDEMHQDLPRM 332
[Close]
BLAST of SMED30027767 vs. UniProt/SwissProt
Match: sp|Q6UY87|BEST1_MACFA (Bestrophin-1 OS=Macaca fascicularis OX=9541 GN=BEST1 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.203e-37
Identity = 77/179 (43.02%), Postives = 109/179 (60.89%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T +E +  E ++L +N          FWVP  W + +  K ++ G I DP  + SL  E+  LR Q  +L  Y  I IPLVYTQVV +AVYS+FL  L   QF++P +   GHE+D  +PVFT  QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S     A +EM+  L
Sbjct:  163 MTPAEHKQLEKLSLPHNM---------FWVPWVWFANLSMKAWLGGRIRDPILLQSLLNEMNTLRTQCGHLYAYDWISIPLVYTQVVTVAVYSFFLTCLVGRQFLNPAKAYPGHELDLVVPVFTFLQFFFYVGWLKVAEQLINPFGEDDDDFETNWIVDRNLQVSLL---AVDEMHQDL 329
[Close]
BLAST of SMED30027767 vs. UniProt/SwissProt
Match: sp|Q8BGM5|BEST2_MOUSE (Bestrophin-2 OS=Mus musculus OX=10090 GN=Best2 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 8.846e-34
Identity = 76/179 (42.46%), Postives = 101/179 (56.42%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FEN+   YN         ++WVP  W S +  +    G I D   +  L EE+   R +   L  Y  I IPLVYTQVV IAVYSYFL  L   QF+DP Q    H +D  +P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFENLNSSYN---------KYWVPCVWFSSLAAQARREGRIRDNSALKLLLEELNVFRSKCGMLFHYDWISIPLVYTQVVTIAVYSYFLACLIGRQFLDPAQGYKDHTLDLCVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNFQVSML---AVDEMYDDL 329
[Close]
BLAST of SMED30027767 vs. TrEMBL
Match: A0A5K3G0L9 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 2.642e-74
Identity = 115/213 (53.99%), Postives = 155/213 (72.77%), Query Frame = -2 
Query:  303 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDV 941
            IR+TF KIIT SEI+AFE IA  Y  + + RY PE+WVP+QWA R++ K  +HG + DPR +  + +E+ + R Q+Q L++YS+I++PLVYTQVV+IAVYSYF   + A+QF++  +      VDF+IPVF+IF FLF+MGWLKVA+CVMNPFGDDDEDF+TS++LDYNLD+S+RS    E  +P  L  A  + +    V+ DNL DFI  V
Sbjct:   44 IRETFGKIITESEIKAFEAIAQYYFKQTRQRYLPEYWVPLQWAVRLVQKAGLHGNLPDPRMIGYMFKEIGDFRHQLQTLEVYSSIMMPLVYTQVVIIAVYSYFGCEILASQFLEMPKVKGEAVVDFFIPVFSIFYFLFLMGWLKVALCVMNPFGDDDEDFETSDILDYNLDVSYRSVLMEEATFPETLHEATFETKPMKGVENDNLNDFIQSV 256
[Close]
BLAST of SMED30027767 vs. TrEMBL
Match: A0A068WLT0 (Bestrophin homolog OS=Echinococcus granulosus OX=6210 GN=EgrG_001141800 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 7.201e-73
Identity = 116/223 (52.02%), Postives = 159/223 (71.30%), Query Frame = -2 
Query:  285 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVD----PGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYK 941
            +R+TF KIIT  EIRAFE IA  Y  + + RY PE+WVP+QWA R++ K  +HG I DPR +  + +E+ E R Q+Q L++YS+I++PLVYTQVV+IAVYSYF   + A+QF++    PG+ +    VDF++P+F+IF FLF+MGWLKVA+CVMNPFGDDDEDF+TS +L+YNLD+S+RS    E  YP  L  A  +      V++DNL +FI  V + L +
Sbjct:  273 VRETFGKIITEPEIRAFEAIAKYYFKQTRQRYLPEYWVPLQWAVRLVQKAGLHGNIPDPRMIGVMFKEIGEFRTQLQTLEVYSSIMMPLVYTQVVIIAVYSYFGCEILASQFLEVAKVPGEAV----VDFFVPIFSIFYFLFLMGWLKVALCVMNPFGDDDEDFETSAILNYNLDVSYRSVLMDESTYPEGLSAATFETSTMKGVEDDNLAEFIKSVSDELAR 491
[Close]
BLAST of SMED30027767 vs. TrEMBL
Match: A0A068YGF1 (Bestrophin homolog OS=Echinococcus multilocularis OX=6211 GN=EmuJ_001141800 PE=3 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 8.179e-73
Identity = 116/223 (52.02%), Postives = 159/223 (71.30%), Query Frame = -2 
Query:  285 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVD----PGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYK 941
            +R+TF KIIT  EIRAFE IA  Y  + + RY PE+WVP+QWA R++ K  +HG I DPR +  + +E+ E R Q+Q L++YS+I++PLVYTQVV+IAVYSYF   + A+QF++    PG+ +    VDF++P+F+IF FLF+MGWLKVA+CVMNPFGDDDEDF+TS +L+YNLD+S+RS    E  YP  L  A  +      V++DNL +FI  V + L +
Sbjct:  273 VRETFGKIITEPEIRAFEAIAKYYFKQTRQRYLPEYWVPLQWAVRLVQKAGLHGNIPDPRMIGVMFKEIGEFRTQLQTLEVYSSIMMPLVYTQVVIIAVYSYFGCEILASQFLEVAKVPGEAV----VDFFVPIFSIFYFLFLMGWLKVALCVMNPFGDDDEDFETSAILNYNLDVSYRSVLMDESTYPEGLSAATFETSTMKGVEDDNLAEFIKSVSDELAR 491
[Close]
BLAST of SMED30027767 vs. TrEMBL
Match: A0A0R3WKE4 (Uncharacterized protein OS=Hydatigena taeniaeformis OX=6205 GN=TTAC_LOCUS1183 PE=4 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 1.096e-72
Identity = 119/219 (54.34%), Postives = 159/219 (72.60%), Query Frame = -2 
Query:  285 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYK 941
            +R+TF KIIT  EIRAFE IA  Y  + + RY PE+WVP+QWA R++ K  +HG I DPR +  L +E+ E R Q+Q L++YS+I++PLVYTQVV+IAVYSYF   + A+QF++  +      VDF++PVF+IF FLF+MGWLKVA+CVMNPFGDDDEDF+TS +L+YNLD+S+RS    E  YP  LK A  +    + V++DNLP+FI  V + L K
Sbjct:  273 VRETFGKIITEPEIRAFEAIAKYYFKQTRQRYLPEYWVPLQWAVRLVQKAGLHGNIPDPRMIGVLFKEIGEFRSQLQTLEVYSSIMMPLVYTQVVIIAVYSYFACEILASQFLEVSKVPGEAAVDFFVPVFSIFYFLFLMGWLKVALCVMNPFGDDDEDFETSAILNYNLDVSYRSVLMDETTYPEGLKAATFETSTMNGVEDDNLPEFIKSVTDELTK 491

HSP 2 Score: 215.698 bits (548), Expect = 1.696e-58
Identity = 101/217 (46.54%), Postives = 142/217 (65.44%), Query Frame = -2 
Query:  291 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNL 941
            ++QTF K+IT  EIRAFE I  +Y    + RY PE+WVPIQWA R++ K  +HG I DP+ M  +  E+   R+Q+  L+ +S++ +PLVYTQV VIAVYSYF+  + A Q ++             +P+F++F F+F++GWLKVA+CVM+PFG+D EDF+TSE+LDYNLD+S+R     +  YP  LK A       D  +EDNL  F+D V  +L
Sbjct:  727 VQQTFGKLITDPEIRAFEAIGRRYFCSTRQRYLPEYWVPIQWAVRVVQKTTLHGNIPDPKIMIHVLGEIGNFRKQLGQLKRFSSLTMPLVYTQVAVIAVYSYFICQIVATQHIERAANETNPNTSMPVPLFSVFYFIFLVGWLKVALCVMSPFGEDYEDFETSEILDYNLDVSYRVVLMDDTTYPEELKRATFTPHTMDGHEEDNLRAFLDSVSRDL 943
[Close]
BLAST of SMED30027767 vs. TrEMBL
Match: A0A4E0S453 (Bestrophin homolog OS=Fasciola hepatica OX=6192 GN=D915_000472 PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 1.854e-72
Identity = 112/225 (49.78%), Postives = 162/225 (72.00%), Query Frame = -2 
Query:  267 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYKYSEPYT 941
            +R+TF  IIT +EI AF+  A++   R K +Y PE+W+PIQWA R++ K    G+I DP+T   + +++ ++R+QMQ+LQI+S+I+IPLVYTQVV+IAVYSYF+  +FA QFV+  +   GH++D Y+P+F+IF FLF+MGWLKVA+CVMNPFGDDDEDFQTS +LDYNL++SFRS       +P  +   + K+   D    D+LP F++ ++ +L K  +  T
Sbjct:  270 VRRTFGVIITEAEIEAFQRTAIECYRRTKTKYTPEYWIPIQWAQRLVLKALQSGYILDPKTAYYIIDQIGDVRKQMQDLQIFSSIMIPLVYTQVVIIAVYSYFMCQIFACQFVEHRRDEAGHKIDLYVPIFSIFSFLFLMGWLKVALCVMNPFGDDDEDFQTSSILDYNLEVSFRSVYMDPRSFPDNMSMPLGKHNQNDK--PDDLPAFLEQIDCDLNKQCDQIT 492
[Close]
BLAST of SMED30027767 vs. Ensembl Cavefish
Match: best1 (bestrophin-2 [Source:NCBI gene;Acc:103045999])

HSP 1 Score: 145.976 bits (367), Expect = 6.618e-38
Identity = 74/177 (41.81%), Postives = 109/177 (61.58%), Query Frame = -2 
Query:  390 IITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 920
            ++TV E R  +++   +N         +FWVP  W   +  +    G I++   ++++  E+  LR Q   L  Y  I +PLVYTQVV +AVYS+FL  L   QF+DP Q   GH++DFY+PVFT+ QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S    +EMY
Sbjct:  162 LMTVEERRQLDDLPSPHN---------KFWVPCMWFVNLALRARTEGRINNDVALSAILNELNTLRSQCMKLYSYDWISLPLVYTQVVTVAVYSFFLACLIGRQFLDPTQGYSGHDLDFYLPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNWLVDRNLQVSLLS---VDEMY 326
[Close]
BLAST of SMED30027767 vs. Ensembl Cavefish
Match: best2 (bestrophin 2 [Source:ZFIN;Acc:ZDB-GENE-090312-127])

HSP 1 Score: 139.043 bits (349), Expect = 1.178e-35
Identity = 73/179 (40.78%), Postives = 105/179 (58.66%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FE++   YN         ++W+P  W + +       G I D  T   L EE+ + R +   L  Y  I +PLVYTQVV +AVYS+FLV L   QF+DP Q   GH++D Y+P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EM+  L
Sbjct:  163 MTREERKKFESLHSPYN---------KYWIPCVWFTNLAAVARSEGRIKDDNTYKLLLEELNKFRGKCSLLFHYDMISVPLVYTQVVTLAVYSFFLVCLIGRQFLDPSQAYPGHDLDLYVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNFQVSMM---AVDEMFGDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Cavefish
Match: BEST3 (bestrophin 3 [Source:HGNC Symbol;Acc:HGNC:17105])

HSP 1 Score: 128.257 bits (321), Expect = 1.411e-32
Identity = 75/218 (34.40%), Postives = 109/218 (50.00%), Query Frame = -2 
Query:  264 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYKYSEPYTR 917
            +T  E + FEN+   +          ++W+P  W + +  K    G I D   + ++  E+   R     L  Y  + IPLVYTQVV +AVY++F   +   QF+DP Q   GH++D Y+PVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ +  +D NL +S     A +EM+                    N+P    DV  N      PYTR
Sbjct:   85 MTPEEKKIFENLKSPHL---------KYWIPTVWFTNLASKARKDGRIQDSVDLQTILTEMNRFRTWCSTLFGYDWVGIPLVYTQVVTLAVYTFFSASIIGRQFLDPAQGYPGHDLDLYVPVFTLLQFFFYSGWLKVAEQLINPFGEDDDDFEANWCIDRNLQVSLM---AVDEMH-------------------MNIPRMTKDVYWNDPDVRPPYTR 271
[Close]
BLAST of SMED30027767 vs. Ensembl Cavefish
Match: best4 (bestrophin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-6])

HSP 1 Score: 115.546 bits (288), Expect = 1.365e-28
Identity = 66/195 (33.85%), Postives = 105/195 (53.85%), Query Frame = -2 
Query:  375 FSGIRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQ-VVVIAVYSYFLVHLFAAQFVDP--GQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 950
            F  ++      +T  E+R  +++   +N         ++W+P+ W + +  K    G + D   +  L +E+   R +   L  Y  I IPLVYTQ VV +AVYS+F   L   QFV P     +  H VD Y+PVFT+ +F F  GWLKV   ++NPFG+DD+DF+T++++D N+ +S  + +   +  P L K
Sbjct:  150 FPTLQHIVDAFMTEEEMRTLDHLYSDFN---------KYWMPLTWFANLASKAREEGRVKDDIALRLLMDELNNYRGKCSMLFHYDWISIPLVYTQQVVTLAVYSFFAFCLIGRQFVKPERADELKVH-VDLYVPVFTLLEFFFYAGWLKVGELIINPFGEDDDDFETNQLIDRNIQVSMLAVDDMHQNLPPLEK 334
[Close]
BLAST of SMED30027767 vs. Ensembl Cavefish
Match: best1 (bestrophin-2 [Source:NCBI gene;Acc:103045999])

HSP 1 Score: 111.694 bits (278), Expect = 2.872e-26
Identity = 66/178 (37.08%), Postives = 95/178 (53.37%), Query Frame = -2 
Query:  390 KIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMY 923
             ++TV E R  +++   +N         +FWVP  W   +  +          RT   +N +V             S IL       VV +AVYS+FL  L   QF+DP Q   GH++DFY+PVFT+ QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S    +EMY
Sbjct:  161 GLMTVEERRQLDDLPSPHN---------KFWVPCMWFVNLALRA---------RTEGRINNDV-----------ALSAIL------NVVTVAVYSFFLACLIGRQFLDPTQGYSGHDLDFYLPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNWLVDRNLQVSLLS---VDEMY 300
[Close]
BLAST of SMED30027767 vs. Ensembl Sea Lamprey
Match: best2 (bestrophin 2 [Source:ZFIN;Acc:ZDB-GENE-090312-127])

HSP 1 Score: 139.813 bits (351), Expect = 4.906e-37
Identity = 74/179 (41.34%), Postives = 104/179 (58.10%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + F+ +   YN         ++WVP  W S +  +    G + D   +  L +E+   R     L  Y  I +PLVYTQVV +AVYS+FL  L   QF+DP Q   GH++D YIPVFT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S     A +EMY +L
Sbjct:  163 MTRDERKRFDGLRCSYN---------KYWVPCVWLSSLAAQARAEGRVRDDVALKLLLDEMNVYRGNCGMLFHYDWISVPLVYTQVVTVAVYSFFLACLIGRQFLDPAQGYPGHDMDLYIPVFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNFLIDRNLQVSML---AVDEMYQNL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Sea Lamprey
Match: best1 (bestrophin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-214])

HSP 1 Score: 124.79 bits (312), Expect = 1.388e-32
Identity = 70/179 (39.11%), Postives = 100/179 (55.87%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T +E R F+ +   +N         +FWVP  W + +  +    G I D  ++  +  ++   R     L  Y  + IPLVYTQVV +AVYS+FL  L   QF+ P Q   GH++D YIPVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ +  +D NL +S       +EMY  L
Sbjct:  163 MTPAERRKFDGLRSPHN---------KFWVPCVWFANLAAQAKAEGRILDNVSLQLILNDLNNFRSCCSMLYSYDWVSIPLVYTQVVTVAVYSFFLACLIGRQFLGP-QGYPGHDMDLYIPVFTLLQFFFYAGWLKVAEQLINPFGEDDDDFEANWCVDRNLQVSLM---GVDEMYRDL 328
[Close]
BLAST of SMED30027767 vs. Ensembl Medaka
Match: best1 (bestrophin-2 [Source:NCBI gene;Acc:101167866])

HSP 1 Score: 150.599 bits (379), Expect = 1.572e-39
Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = -2 
Query:  381 FSGIRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 950
            F       + ++T  E+R FE +   +N         +FWVP  W   +  +    G I++   +T++  E+  LR +   L  Y  I +PLVYTQV  +AVYS+FL  L   QF+DP Q   GH+VDFY+PVFT+ QF F +GWLKVA  ++NPFG+DD+DF+T+ ++D NL +S  S    +EMY SL
Sbjct:  149 FPTTEHLVQALMTSEELRHFEELPSPHN---------KFWVPCMWFVNLALRARTEGRINNDVALTAILTELNSLRAKCMKLYGYDWISLPLVYTQVATVAVYSFFLACLIGRQFLDPAQGYPGHDVDFYLPVFTLLQFFFYVGWLKVAEQLINPFGEDDDDFETNWVVDRNLQVSLLS---VDEMYDSL 326
[Close]
BLAST of SMED30027767 vs. Ensembl Medaka
Match: best2 (bestrophin 2 [Source:NCBI gene;Acc:110015962])

HSP 1 Score: 139.813 bits (351), Expect = 5.662e-36
Identity = 72/179 (40.22%), Postives = 103/179 (57.54%), Query Frame = -2 
Query:  381 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSL 917
            +T  E + FE +   YN         ++W+P  W + +       G I D   +  L EE+   R +   L  Y  + +PLVYTQVV +AVYS+FLV L   QF+DP Q   GH++D Y+P+FT+ QF F  GWLKVA  ++NPFG+DD+DF+T+ ++D N  +S     A +EMY  L
Sbjct:  163 MTREERKKFEGLHSPYN---------KYWIPCVWFTNLAAVARCEGRIRDDHALKLLLEELNAFRGKCSLLFHYDMVSVPLVYTQVVTLAVYSFFLVCLIGRQFLDPSQGYQGHDLDLYVPIFTLLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNFQVSMM---AVDEMYGDL 329
[Close]
BLAST of SMED30027767 vs. Ensembl Medaka
Match: BEST3 (bestrophin 3 [Source:NCBI gene;Acc:101172121])

HSP 1 Score: 130.568 bits (327), Expect = 1.114e-32
Identity = 66/181 (36.46%), Postives = 101/181 (55.80%), Query Frame = -2 
Query:  375 ITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLK 917
            +T  E + FENI   +          ++W+P+ W S +  +    G I D   + ++  E+   R     L  Y  + IPLVYTQVV +AVY++F   +   QF+DP Q   GH++D Y+PVFT+ QF F  GWLKVA  ++NPFG+DD+DF+ + ++D NL +S  + +      P + K
Sbjct:  163 MTPEERKVFENIRSPHL---------KYWIPVVWFSNLASRARQEGRIQDAIDLQNILNEMNTFRTWCATLFGYDWVGIPLVYTQVVTLAVYTFFFACIIGRQFLDPAQGHPGHDLDLYVPVFTLLQFFFYSGWLKVAEQLINPFGEDDDDFEANWIIDRNLQVSLLAVDEMHMNLPHMTK 334
[Close]
BLAST of SMED30027767 vs. Planmine SMEST
Match: SMESG000065100.1 (SMESG000065100.1)

HSP 1 Score: 558.525 bits (1438), Expect = 0.000e+0
Identity = 268/269 (99.63%), Postives = 269/269 (100.00%), Query Frame = -2 
Query:  135 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYKYSEPYTRKRNFSSSYSSKVFANLHQFFRKTSLPFIENDSDCIIHSNDQKV 941
            IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYKYSEPYTRKRNFSSSYS+KVFANLHQFFRKTSLPFIENDSDCIIHSNDQKV
Sbjct:  182 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNLYKYSEPYTRKRNFSSSYSTKVFANLHQFFRKTSLPFIENDSDCIIHSNDQKV 450
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BLAST of SMED30027767 vs. Planmine SMEST
Match: SMESG000070057.1 (SMESG000070057.1)

HSP 1 Score: 303.138 bits (775), Expect = 6.445e-99
Identity = 138/217 (63.59%), Postives = 173/217 (79.72%), Query Frame = -2 
Query:  291 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNL 941
            I+ TF+KIIT +E+RAFENIA K  ++ K ++ PEFWVPIQW+SR++ K F+HGFISDPRT+ S+  +++ LR QM  LQI+S I+IPLVYTQV++IAVYSYFL  LFA+QFVDP  +I GHEVD Y+P+FTIFQFLF MGWLKVAMCVMNPFGDDDEDFQTS++LD NLD++FRS  A   MYP  L P  M Y+ Q   DED L DF+ D++++L
Sbjct:  180 IQSTFRKIITDAEVRAFENIAAKNYSKTKSKFPPEFWVPIQWSSRLLQKAFVHGFISDPRTLNSIISDLDVLRGQMHTLQIFSGIMIPLVYTQVIIIAVYSYFLCQLFASQFVDPESKITGHEVDLYVPIFTIFQFLFFMGWLKVAMCVMNPFGDDDEDFQTSKILDDNLDVTFRSVTADSSMYPEHLDPPAMWYKTQKNCDEDLLDDFMKDIDSDL 396
[Close]
BLAST of SMED30027767 vs. Planmine SMEST
Match: SMESG000070057.1 (SMESG000070057.1)

HSP 1 Score: 303.138 bits (775), Expect = 6.585e-99
Identity = 138/217 (63.59%), Postives = 173/217 (79.72%), Query Frame = -2 
Query:  291 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNL 941
            I+ TF+KIIT +E+RAFENIA K  ++ K ++ PEFWVPIQW+SR++ K F+HGFISDPRT+ S+  +++ LR QM  LQI+S I+IPLVYTQV++IAVYSYFL  LFA+QFVDP  +I GHEVD Y+P+FTIFQFLF MGWLKVAMCVMNPFGDDDEDFQTS++LD NLD++FRS  A   MYP  L P  M Y+ Q   DED L DF+ D++++L
Sbjct:  180 IQSTFRKIITDAEVRAFENIAAKNYSKTKSKFPPEFWVPIQWSSRLLQKAFVHGFISDPRTLNSIISDLDVLRGQMHTLQIFSGIMIPLVYTQVIIIAVYSYFLCQLFASQFVDPESKITGHEVDLYVPIFTIFQFLFFMGWLKVAMCVMNPFGDDDEDFQTSKILDDNLDVTFRSVTADSSMYPEHLDPPAMWYKTQKNCDEDLLDDFMKDIDSDL 396
[Close]
BLAST of SMED30027767 vs. Planmine SMEST
Match: SMESG000055094.1 (SMESG000055094.1)

HSP 1 Score: 289.271 bits (739), Expect = 1.531e-93
Identity = 130/217 (59.91%), Postives = 169/217 (77.88%), Query Frame = -2 
Query:  291 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNL 941
            I+ T+ KIIT +EIRAFE IA+K ++  K  Y PE+WVPIQWASR+I K FIH ++SDPRT+  + EE++ +R  MQNLQ++  I+IPLVYTQVV+IAVYS+FL  LFA+QF+DP +++ GHE+DFY+P+FTIFQFLF+MGWLKVAMCVMNPFGDDDEDFQTSE+LD NLD ++RS     EM+P  L P  M Y      + DNL  F+D+++ +L
Sbjct:  165 IQNTYGKIITDAEIRAFEAIAIKSDSNGKPNYVPEYWVPIQWASRVIQKSFIHKYVSDPRTVNKMIEELDRVRNNMQNLQVFCGIMIPLVYTQVVIIAVYSFFLCELFASQFIDPREKVKGHELDFYVPIFTIFQFLFLMGWLKVAMCVMNPFGDDDEDFQTSEILDNNLDTTYRSVSGELEMFPERLDPPKMNYECLLKTEPDNLETFLDEIDYDL 381
[Close]
BLAST of SMED30027767 vs. Planmine SMEST
Match: SMESG000055094.1 (SMESG000055094.1)

HSP 1 Score: 288.886 bits (738), Expect = 3.174e-93
Identity = 130/217 (59.91%), Postives = 169/217 (77.88%), Query Frame = -2 
Query:  291 IRQTFKKIITVSEIRAFENIALKYNTRNKIRYEPEFWVPIQWASRIIHKCFIHGFISDPRTMTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQFVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQTSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFIDDVENNL 941
            I+ T+ KIIT +EIRAFE IA+K ++  K  Y PE+WVPIQWASR+I K FIH ++SDPRT+  + EE++ +R  MQNLQ++  I+IPLVYTQVV+IAVYS+FL  LFA+QF+DP +++ GHE+DFY+P+FTIFQFLF+MGWLKVAMCVMNPFGDDDEDFQTSE+LD NLD ++RS     EM+P  L P  M Y      + DNL  F+D+++ +L
Sbjct:  182 IQNTYGKIITDAEIRAFEAIAIKSDSNGKPNYVPEYWVPIQWASRVIQKSFIHKYVSDPRTVNKMIEELDRVRNNMQNLQVFCGIMIPLVYTQVVIIAVYSFFLCELFASQFIDPREKVKGHELDFYVPIFTIFQFLFLMGWLKVAMCVMNPFGDDDEDFQTSEILDNNLDTTYRSVSGELEMFPERLDPPKMNYECLLKTEPDNLETFLDEIDYDL 398
The following BLAST results are available for this feature:
BLAST of SMED30027767 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
BEST12.269e-3841.34bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703][more]
BEST12.986e-3841.34bestrophin 1 [Source:HGNC Symbol;Acc:HGNC:12703][more]
BEST24.874e-3441.34bestrophin 2 [Source:HGNC Symbol;Acc:HGNC:17107][more]
BEST24.874e-3441.34bestrophin 2 [Source:HGNC Symbol;Acc:HGNC:17107][more]
BEST24.874e-3441.34bestrophin 2 [Source:HGNC Symbol;Acc:HGNC:17107][more]
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BLAST of SMED30027767 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
best-42.753e-3034.81Bestrophin homolog [Source:UniProtKB/TrEMBL;Acc:O... [more]
best-235.427e-2939.16Bestrophin homolog [Source:UniProtKB/TrEMBL;Acc:A... [more]
best-29.625e-2936.14Bestrophin homolog 2 [Source:UniProtKB/Swiss-Prot... [more]
best-34.535e-2832.43Bestrophin homolog [Source:UniProtKB/TrEMBL;Acc:O... [more]
best-58.450e-2831.07Bestrophin homolog 5 [Source:UniProtKB/Swiss-Prot... [more]
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BLAST of SMED30027767 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Best11.146e-3342.94gene:FBgn0040238 transcript:FBtr0082183[more]
Best11.166e-3342.94gene:FBgn0040238 transcript:FBtr0114590[more]
Best11.294e-3342.94gene:FBgn0040238 transcript:FBtr0337020[more]
Best11.324e-3342.94gene:FBgn0040238 transcript:FBtr0306023[more]
Best36.665e-3336.02gene:FBgn0036492 transcript:FBtr0075618[more]
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BLAST of SMED30027767 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
best11.135e-4042.37bestrophin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-214][more]
best17.938e-3942.37bestrophin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-214][more]
best22.012e-3841.90bestrophin 2 [Source:ZFIN;Acc:ZDB-GENE-090312-127][more]
best42.653e-3034.25bestrophin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-6][more]
best42.982e-2935.37bestrophin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-6][more]
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BLAST of SMED30027767 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
best11.277e-3543.23bestrophin 1 [Source:NCBI gene;Acc:100302038][more]
phka1p11.393e-3542.05phosphorylase kinase, alpha 1 pseudogene 1 [Source... [more]
phka1p11.504e-3542.05phosphorylase kinase, alpha 1 pseudogene 1 [Source... [more]
phka1p11.630e-3542.05phosphorylase kinase, alpha 1 pseudogene 1 [Source... [more]
phka1p11.630e-3542.05phosphorylase kinase, alpha 1 pseudogene 1 [Source... [more]
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BLAST of SMED30027767 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Best13.537e-4143.58bestrophin 1 [Source:MGI Symbol;Acc:MGI:1346332][more]
Best11.099e-4043.58bestrophin 1 [Source:MGI Symbol;Acc:MGI:1346332][more]
Best21.090e-3442.46bestrophin 2 [Source:MGI Symbol;Acc:MGI:2387588][more]
Best21.090e-3442.46bestrophin 2 [Source:MGI Symbol;Acc:MGI:2387588][more]
Best21.090e-3442.46bestrophin 2 [Source:MGI Symbol;Acc:MGI:2387588][more]
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BLAST of SMED30027767 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|O88870|BEST1_MOUSE7.690e-4043.58Bestrophin-1 OS=Mus musculus OX=10090 GN=Best1 PE=... [more]
sp|Q8WMR7|BEST1_PIG2.779e-3842.05Bestrophin-1 (Fragment) OS=Sus scrofa OX=9823 GN=B... [more]
sp|O76090|BEST1_HUMAN1.090e-3741.34Bestrophin-1 OS=Homo sapiens OX=9606 GN=BEST1 PE=1... [more]
sp|Q6UY87|BEST1_MACFA1.203e-3743.02Bestrophin-1 OS=Macaca fascicularis OX=9541 GN=BES... [more]
sp|Q8BGM5|BEST2_MOUSE8.846e-3442.46Bestrophin-2 OS=Mus musculus OX=10090 GN=Best2 PE=... [more]
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BLAST of SMED30027767 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A5K3G0L92.642e-7453.99Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A068WLT07.201e-7352.02Bestrophin homolog OS=Echinococcus granulosus OX=6... [more]
A0A068YGF18.179e-7352.02Bestrophin homolog OS=Echinococcus multilocularis ... [more]
A0A0R3WKE41.096e-7254.34Uncharacterized protein OS=Hydatigena taeniaeformi... [more]
A0A4E0S4531.854e-7249.78Bestrophin homolog OS=Fasciola hepatica OX=6192 GN... [more]
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BLAST of SMED30027767 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
best16.618e-3841.81bestrophin-2 [Source:NCBI gene;Acc:103045999][more]
best21.178e-3540.78bestrophin 2 [Source:ZFIN;Acc:ZDB-GENE-090312-127][more]
BEST31.411e-3234.40bestrophin 3 [Source:HGNC Symbol;Acc:HGNC:17105][more]
best41.365e-2833.85bestrophin 4 [Source:ZFIN;Acc:ZDB-GENE-070912-6][more]
best12.872e-2637.08bestrophin-2 [Source:NCBI gene;Acc:103045999][more]
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BLAST of SMED30027767 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2
Match NameE-valueIdentityDescription
best24.906e-3741.34bestrophin 2 [Source:ZFIN;Acc:ZDB-GENE-090312-127][more]
best11.388e-3239.11bestrophin 1 [Source:ZFIN;Acc:ZDB-GENE-110411-214][more]
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BLAST of SMED30027767 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30027767 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30027767 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
best11.572e-3941.05bestrophin-2 [Source:NCBI gene;Acc:101167866][more]
best25.662e-3640.22bestrophin 2 [Source:NCBI gene;Acc:110015962][more]
BEST31.114e-3236.46bestrophin 3 [Source:NCBI gene;Acc:101172121][more]
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BLAST of SMED30027767 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000065100.10.000e+099.63SMESG000065100.1[more]
SMESG000070057.16.445e-9963.59SMESG000070057.1[more]
SMESG000070057.16.585e-9963.59SMESG000070057.1[more]
SMESG000055094.11.531e-9359.91SMESG000055094.1[more]
SMESG000055094.13.174e-9359.91SMESG000055094.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30027767 ID=SMED30027767|Name=SMED30027767|organism=Schmidtea mediterranea sexual|type=transcript|length=1206bp
TTTTTTTATCATTAATACTAAATAAATGACAATGACAAATACAGAATGCG
ATCACATATTTCCAAACATCAATATATATAATTATCTTTATCTTCAAGAA
GTCCTGATTCGACGTCTTCAAACTTTGTTAGTTTGACTTTTTGGTCATTG
CTATGGATAATACAATCGGAATCGTTTTCAATAAATGGAAGAGAAGTCTT
TCTGAAGAATTGGTGTAAATTTGCAAAAACTTTTGACGAATATGAACTTG
AGAAATTTCTTTTCCTCGTATATGGTTCTGAATATTTGTACAAATTATTC
TCAACATCATCTATAAAATCCGGCAAATTATCCTCGTCAACGGCATCTTG
CAATCGGTATTTCATAATTGCTGGTTTTAATAAAGAGGGATACATTTCTT
CACTGGCTTCGGACGACCTGAAGGATATATCGAGATTGTAATCCAACATT
TCACTTGTCTGGAAATCTTCGTCATCATCACCAAAAGGATTCATTACACA
CATTGCGACCTTCAGCCAGCCCATCATGAAAAGAAACTGGAAAATCGTAA
AAACTGGTATATAAAAGTCAACTTCATGTCCAACAATTCTCTGGCCAGGA
TCTACAAATTGTGCGGCAAACAAATGCACCAAAAAATATGAGTAGACAGC
AATAACGACTACCTGAGTGTAAACTAATGGAATGAGGATGTTGCTGTAAA
TCTGTAAATTTTGCATTTGTTCTCTTAGCTCTTCGACCTCCTCGTTCAAA
CTGGTCATTGTTCGTGGGTCACTGATGAAGCCATGTATAAAGCATTTGTG
AATAATTCTTGACGCCCATTGTATTGGGACCCAGAATTCTGGCTCGTATC
GGATCTTATTTCTAGTATTATATTTTAATGCGATATTTTCGAACGCCCGA
ATCTCTGACACGGTGATTATTTTTTTAAATGTTTGACGAATTCCTGAAAA
GAATTAACAATTATATGTGTTTATATGAATTCCTTGAATCGAATGTGACC
TCTTACCTATTAATTATAATAGGTACAGTTCCGGAGACTTAATAACCTTT
ACTGTTTTATGAAAATAAAAACACAATAACGTTAAAAATTACTAGACCAG
TTCATTCAACGGAATTATAAATTAACATTTAAAGGTCCGGGTTCCATTGC
GCCAGGTTAATTACATATGCTATGAAAACTTAATTTCTTTAAAACTTAAA
GGTGAA
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protein sequence of SMED30027767-orf-1

>SMED30027767-orf-1 ID=SMED30027767-orf-1|Name=SMED30027767-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=230bp
MTSLNEEVEELREQMQNLQIYSNILIPLVYTQVVVIAVYSYFLVHLFAAQ
FVDPGQRIVGHEVDFYIPVFTIFQFLFMMGWLKVAMCVMNPFGDDDEDFQ
TSEMLDYNLDISFRSSEASEEMYPSLLKPAIMKYRLQDAVDEDNLPDFID
DVENNLYKYSEPYTRKRNFSSSYSSKVFANLHQFFRKTSLPFIENDSDCI
IHSNDQKVKLTKFEDVESGLLEDKDNYIY*
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Aliases
The feature 'SMED30027767' has the following synonyms
Synonym
best-b
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000017photoreceptor neuron
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR000615Bestrophin
IPR021134Bestrophin/UPF0187
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1..21
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR021134Bestrophin/UPF0187PFAMPF01062Bestrophincoord: 3..109
e-value: 7.8E-32
score: 110.8
IPR000615BestrophinPANTHERPTHR10736BESTROPHINcoord: 2..175