Mitochondrial ribosomal protein L4
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30027556 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Human
Match: MRPL4 (mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276]) HSP 1 Score: 204.142 bits (518), Expect = 8.749e-63 Identity = 98/218 (44.95%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 T +P QAW+E+L+ + ++G DLHPDVF PRLD+++ WQ ++ + + K TR EV G+K WPQKG+GRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHI+D L LPT D +YL L R WG SVL V+ T +E P++I + S + + +IPA +NV S++K+ T++LTLP++ +E+KL+ Sbjct: 57 THRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLKHQTLVLTLPTVAFLEDKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Human
Match: MRPL4 (mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276]) HSP 1 Score: 204.142 bits (518), Expect = 1.141e-62 Identity = 98/218 (44.95%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 T +P QAW+E+L+ + ++G DLHPDVF PRLD+++ WQ ++ + + K TR EV G+K WPQKG+GRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHI+D L LPT D +YL L R WG SVL V+ T +E P++I + S + + +IPA +NV S++K+ T++LTLP++ +E+KL+ Sbjct: 57 THRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLKHQTLVLTLPTVAFLEDKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Human
Match: MRPL4 (mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276]) HSP 1 Score: 204.142 bits (518), Expect = 1.141e-62 Identity = 98/218 (44.95%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 T +P QAW+E+L+ + ++G DLHPDVF PRLD+++ WQ ++ + + K TR EV G+K WPQKG+GRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHI+D L LPT D +YL L R WG SVL V+ T +E P++I + S + + +IPA +NV S++K+ T++LTLP++ +E+KL+ Sbjct: 57 THRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLKHQTLVLTLPTVAFLEDKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Human
Match: MRPL4 (mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276]) HSP 1 Score: 176.407 bits (446), Expect = 1.622e-52 Identity = 86/189 (45.50%), Postives = 121/189 (64.02%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPA 778 T +P QAW+E+L+ + ++G DLHPDVF PRLD+++ WQ ++ + + K TR EV G+K WPQKG+GRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHI+D L LPT D +YL L R WG SVL V+ T +E P++I + S + + +IPA Sbjct: 57 THRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPA 245
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Human
Match: MRPL4 (mitochondrial ribosomal protein L4 [Source:HGNC Symbol;Acc:HGNC:14276]) HSP 1 Score: 177.948 bits (450), Expect = 5.199e-52 Identity = 87/193 (45.08%), Postives = 122/193 (63.21%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVN 790 T +P QAW+E+L+ + ++G DLHPDVF PRLD+++ WQ ++ + + K TR EV G+K WPQKG+GRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHI+D L LPT D +YL L R WG SVL V+ T +E P++I + S + + +IPA A Sbjct: 57 THRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVATR 249
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Celegans
Match: mrpl-4 (Mitochondrial Ribosomal Protein, Large [Source:UniProtKB/TrEMBL;Acc:O17005]) HSP 1 Score: 195.667 bits (496), Expect = 5.872e-60 Identity = 98/222 (44.14%), Postives = 140/222 (63.06%), Query Frame = 2 Query: 212 NTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDL-NLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 N +K QAW+ L +D KLG +DLHPD+F PR+D+++ NL WQ VYR V K+ T+ E+ G+K WPQK +GRA G +PQFI G G GPR +F +LP VR+ GL L++K QD+LHIVD + NL D +Y I+L E RN+G SVLFV+ DE +++ +P V+P Y +N +SL+KYDT++L+ +L +EE+L+ + Sbjct: 43 NPFIKTPQAWVSNLDTIEDEKLGLVDLHPDIFRTSPRIDILHRNLTWQSVYRNVQMTKMLTKAEMPGGGRKPWPQKKTGRAHVGSIRSPQFIRGGFANGVRGPRTWFYMLPDAVRIQGLCVALTLKHTQDDLHIVDKIQNLQNGDPKYWIDLCEARNYGYSVLFVDDCDEISGGLAEAQQALPWLNVMPVYGLNCFSLMKYDTIVLSRSALERVEERLLTQM 264
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Fly
Match: mRpL4 (gene:FBgn0001995 transcript:FBtr0080843) HSP 1 Score: 213.386 bits (542), Expect = 1.073e-66 Identity = 98/215 (45.58%), Postives = 143/215 (66.51%), Query Frame = 2 Query: 230 KQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 +QAW+E +RK+G ++LHPDVF A PR+D+I N+ WQ YR+V TR EV G+K WPQKG GRARHG +P GG V GP P +F +LP R+LGLTSTLS+KL QD+LHI+D++++PT D E+L +LI RNWG SVL V+ P NI + + + ++P + +NV+S++K+DT++LT+ ++ +E++L+ L Sbjct: 65 RQAWIENTDAVAERKVGLIELHPDVFAAQPRVDIIQENVEWQSKYRYVSMAHTKTRAEVRGGGRKPWPQKGGGRARHGSLRSPMLKGGGVVHGPRSPTTHFYMLPFYKRVLGLTSTLSVKLAQDDLHIIDNVDIPTGDAEFLKDLIAERNWGPSVLIVDEDHMFPANICQASDDLGYVNLMPTFGLNVYSMLKHDTLVLTVAAVKHLEQRLLYQL 279
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Zebrafish
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:553771]) HSP 1 Score: 187.578 bits (475), Expect = 1.437e-56 Identity = 94/213 (44.13%), Postives = 137/213 (64.32%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 P Q WLE+L D +LG +DLHPDVF RLD+++ WQ ++ + + + TR EV G+K W QK +GRARHG +P + GG + GP GP +Y+ +LP+ VR+ GL LS KL QD LHIVD L +PT D +YL +L++ R WG SVL V+ +E P+NI K + +IPA +NV SL+K+++++LTL ++ +E+KL+ Sbjct: 70 PAQTWLESLGSRDSDQLGVVDLHPDVFSVPIRLDILHAVEVWQRNFKRISYANVKTRAEVRGGGRKPWQQKRTGRARHGSIRSPLWRGGGIIHGPRGPTSYYYMLPMKVRVQGLKIALSAKLAQDYLHIVDSLEIPTPDPQYLQDLVKHRQWGDSVLIVDVGEEFPQNILKATEDLKTVNIIPALGLNVHSLLKHESLVLTLEAVKFLEKKLL 282
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Zebrafish
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:553771]) HSP 1 Score: 187.578 bits (475), Expect = 1.522e-56 Identity = 94/213 (44.13%), Postives = 137/213 (64.32%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 P Q WLE+L D +LG +DLHPDVF RLD+++ WQ ++ + + + TR EV G+K W QK +GRARHG +P + GG + GP GP +Y+ +LP+ VR+ GL LS KL QD LHIVD L +PT D +YL +L++ R WG SVL V+ +E P+NI K + +IPA +NV SL+K+++++LTL ++ +E+KL+ Sbjct: 69 PAQTWLESLGSRDSDQLGVVDLHPDVFSVPIRLDILHAVEVWQRNFKRISYANVKTRAEVRGGGRKPWQQKRTGRARHGSIRSPLWRGGGIIHGPRGPTSYYYMLPMKVRVQGLKIALSAKLAQDYLHIVDSLEIPTPDPQYLQDLVKHRQWGDSVLIVDVGEEFPQNILKATEDLKTVNIIPALGLNVHSLLKHESLVLTLEAVKFLEKKLL 281
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Xenopus
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:549976]) HSP 1 Score: 188.348 bits (477), Expect = 7.067e-57 Identity = 92/217 (42.40%), Postives = 140/217 (64.52%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 + + PK WLE+L+ PDD+ LG + LHPDVF PR+D+++ + WQ ++ + K+ TR EV GKK QKGSGRAR G +P + GG GP GP +Y+ ++P+ +R+ GL L+ KL QD+LH++D L + T D +YL++LI+ R WG+SVL V+ + P NI + VIPA ++V+ ++K+DTVILT +++ +EEKL+ Sbjct: 53 SHLSPKPVWLESLRHPDDQPLGLVHLHPDVFTVPPRIDILHQVVTWQRNFKRISHAKVKTRAEVRGGGKKPRQQKGSGRARQGSIRSPLWRGGGVAHGPRGPTSYYYMMPMKMRVQGLKIALTAKLAQDDLHVIDSLEISTPDPQYLVDLIKHRQWGESVLIVDVNENLPENIFNATVNLKKINVIPAIGLSVFGMLKHDTVILTAGAVDFLEEKLL 269
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Xenopus
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:549976]) HSP 1 Score: 164.081 bits (414), Expect = 4.398e-47 Identity = 83/204 (40.69%), Postives = 125/204 (61.27%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPA----YAVNVWSLIKYD 814 + + PK WLE+L+ PDD+ LG + LHPDVF PR+D+++ + WQ ++ + K+ TR EV GKK QKGSGRAR G +P + GG GP GP +Y+ ++P+ +R+ GL L+ KL QD+LH++D L + T D +YL++LI+ R WG+SVL V+ + P NI + VIPA + +W+ I+Y+ Sbjct: 62 SHLSPKPVWLESLRHPDDQPLGLVHLHPDVFTVPPRIDILHQVVTWQRNFKRISHAKVKTRAEVRGGGKKPRQQKGSGRARQGSIRSPLWRGGGVAHGPRGPTSYYYMMPMKMRVQGLKIALTAKLAQDDLHVIDSLEISTPDPQYLVDLIKHRQWGESVLIVDVNENLPENIFNATVNLKKINVIPAIGECFYHFLWNNIQYN 265
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Mouse
Match: Mrpl4 (mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]) HSP 1 Score: 208.379 bits (529), Expect = 1.248e-64 Identity = 108/282 (38.30%), Postives = 169/282 (59.93%), Query Frame = 2 Query: 23 MIKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSIVKRNLLESVSCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 M+++F+ ++R LS R +++ + EP D ++ ++++ L +P QAW+E+L+ + ++G +LHPDVF PRLD+++ WQ +R + + TR EV G+K W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHIVD L LPT D +YL L + R+WG SVL V+ T +E P+N+ S + + +IPA +NV+S++K+ T++LTLPS+ +E+KL+ Sbjct: 1 MLRLFQAASRASLRLSGSRVIHS----LAEGAERPAEISEPRDSAGLLDPVLRKCELRI----PVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYRHWGSSVLLVDLTHEEMPKNVVAATSGLNSFNLIPAVGLNVYSMLKHQTLVLTLPSVAFLEDKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Mouse
Match: Mrpl4 (mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]) HSP 1 Score: 151.369 bits (381), Expect = 4.471e-43 Identity = 89/275 (32.36%), Postives = 144/275 (52.36%), Query Frame = 2 Query: 23 MIKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSIVKRNLLESVSCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVE---------RTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDT 817 M+++F+ ++R LS R +++ + EP D ++ ++++ L +P QAW+E+L+ + ++G +LHPDVF PRLD+++ WQ +R + + TR E+ + K + SG T P G GP GP +Y+ +LP+ VR LGL L++KL QD+LHIVD L LPT D +YL L + R+WG SVL V+ T +E P+N+ S + + +IPA +NV+S++K+ T Sbjct: 1 MLRLFQAASRASLRLSGSRVIHS----LAEGAERPAEISEPRDSAGLLDPVLRKCELRI----PVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAELLNITHSNTLCQPSSKFLRSQTSGDTNTSYATVP---AGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYRHWGSSVLLVDLTHEEMPKNVVAATSGLNSFNLIPAVGLNVYSMLKHQT 264
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Mouse
Match: Mrpl4 (mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]) HSP 1 Score: 145.591 bits (366), Expect = 2.333e-41 Identity = 80/226 (35.40%), Postives = 123/226 (54.42%), Query Frame = 2 Query: 26 IKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSIVKRNLLESVSCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPR--------LDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRN 679 +++F+ ++R LS R +++ + EP D ++ ++++ L +P QAW+E+L+ + ++G +LHPDVF PR LD+++ WQ +R + + TR EV G+K W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHIVD L LPT D +YL L + R+ Sbjct: 2 LRLFQAASRASLRLSGSRVIHS----LAEGAERPAEISEPRDSAGLLDPVLRKCELRI----PVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAPRWSLTMKYRLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYRH 219
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Mouse
Match: Mrpl4 (mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]) HSP 1 Score: 88.9669 bits (219), Expect = 1.219e-20 Identity = 49/159 (30.82%), Postives = 83/159 (52.20%), Query Frame = 2 Query: 23 MIKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSIVKRNLLESVSCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQ 499 M+++F+ ++R LS R +++ + EP D ++ ++++ L +P QAW+E+L+ + ++G +LHPDVF PRLD+++ WQ +R + + TR EV G+K W QKGSGRARHG +P + G + Sbjct: 1 MLRLFQAASRASLRLSGSRVIHS----LAEGAERPAEISEPRDSAGLLDPVLRKCELRI----PVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGATE 151
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Mouse
Match: Mrpl4 (mitochondrial ribosomal protein L4 [Source:MGI Symbol;Acc:MGI:2137210]) HSP 1 Score: 88.5817 bits (218), Expect = 1.333e-20 Identity = 49/157 (31.21%), Postives = 82/157 (52.23%), Query Frame = 2 Query: 23 MIKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSIVKRNLLESVSCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGG 493 M+++F+ ++R LS R +++ + EP D ++ ++++ L +P QAW+E+L+ + ++G +LHPDVF PRLD+++ WQ +R + + TR EV G+K W QKGSGRARHG +P + G Sbjct: 1 MLRLFQAASRASLRLSGSRVIHS----LAEGAERPAEISEPRDSAGLLDPVLRKCELRI----PVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGA 149
BLAST of Mitochondrial ribosomal protein L4 vs. UniProt/SwissProt
Match: sp|Q9DCU6|RM04_MOUSE (39S ribosomal protein L4, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl4 PE=1 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 8.726e-64 Identity = 108/282 (38.30%), Postives = 169/282 (59.93%), Query Frame = 2 Query: 23 MIKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSIVKRNLLESVSCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 M+++F+ ++R LS R +++ + EP D ++ ++++ L +P QAW+E+L+ + ++G +LHPDVF PRLD+++ WQ +R + + TR EV G+K W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHIVD L LPT D +YL L + R+WG SVL V+ T +E P+N+ S + + +IPA +NV+S++K+ T++LTLPS+ +E+KL+ Sbjct: 1 MLRLFQAASRASLRLSGSRVIHS----LAEGAERPAEISEPRDSAGLLDPVLRKCELRI----PVHRRPVQAWVESLRGFEQERIGLAELHPDVFATAPRLDIVHQVAIWQRNFRRISYANTKTRAEVSGGGRKPWQQKGSGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLMQDDLHIVDSLELPTADPQYLTELAQYRHWGSSVLLVDLTHEEMPKNVVAATSGLNSFNLIPAVGLNVYSMLKHQTLVLTLPSVAFLEDKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. UniProt/SwissProt
Match: sp|Q9BYD3|RM04_HUMAN (39S ribosomal protein L4, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL4 PE=1 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 5.479e-62 Identity = 98/218 (44.95%), Postives = 144/218 (66.06%), Query Frame = 2 Query: 215 TDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNST-DEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 T +P QAW+E+L+ + ++G DLHPDVF PRLD+++ WQ ++ + + K TR EV G+K WPQKG+GRARHG +P + GG GP GP +Y+ +LP+ VR LGL L++KL QD+LHI+D L LPT D +YL L R WG SVL V+ T +E P++I + S + + +IPA +NV S++K+ T++LTLP++ +E+KL+ Sbjct: 57 THRRPVQAWVESLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLHIMDSLELPTGDPQYLTELAHYRRWGDSVLLVDLTHEEMPQSIVEATSRLKTFNLIPAVGLNVHSMLKHQTLVLTLPTVAFLEDKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. UniProt/SwissProt
Match: sp|Q32PI6|RM04_BOVIN (39S ribosomal protein L4, mitochondrial OS=Bos taurus OX=9913 GN=MRPL4 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.881e-60 Identity = 96/215 (44.65%), Postives = 142/215 (66.05%), Query Frame = 2 Query: 224 KPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVN-STDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 +P QAW+E+L+ + ++G +LHPDVF PRLD+++ WQ ++ + + K TR EV G+K W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR+ GL L++KL QD+LHIVD L LPT D +YL+ L R WG SVLFV+ ++ P+N+ S + + +IPA +NV S++K+ T++LTLP++ +EEKL+ Sbjct: 60 RPVQAWVESLRGYEQERVGLTELHPDVFSTAPRLDILHQVAIWQKNFKRISYAKTKTRAEVRGGGRKPWQQKGSGRARHGSIRSPIWRGGGVAHGPRGPTSYYYMLPMKVRVQGLKVALTVKLAQDDLHIVDSLELPTTDPQYLMELARYRRWGDSVLFVDLEHEDMPQNVVAATSGLKTFNLIPAIGLNVHSMLKHQTLVLTLPTVAFLEEKLL 274
BLAST of Mitochondrial ribosomal protein L4 vs. UniProt/SwissProt
Match: sp|Q503X2|RM04_DANRE (39S ribosomal protein L4, mitochondrial OS=Danio rerio OX=7955 GN=mrpl4 PE=2 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 1.084e-55 Identity = 94/213 (44.13%), Postives = 137/213 (64.32%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 P Q WLE+L D +LG +DLHPDVF RLD+++ WQ ++ + + + TR EV G+K W QK +GRARHG +P + GG + GP GP +Y+ +LP+ VR+ GL LS KL QD LHIVD L +PT D +YL +L++ R WG SVL V+ +E P+NI K + +IPA +NV SL+K+++++LTL ++ +E+KL+ Sbjct: 70 PAQTWLESLGSRDSDQLGVVDLHPDVFSVPIRLDILHAVEVWQRNFKRISYANVKTRAEVRGGGRKPWQQKRTGRARHGSIRSPLWRGGGIIHGPRGPTSYYYMLPMKVRVQGLKIALSAKLAQDYLHIVDSLEIPTPDPQYLQDLVKHRQWGDSVLIVDVGEEFPQNILKATEDLKTVNIIPALGLNVHSLLKHESLVLTLEAVKFLEKKLL 282
BLAST of Mitochondrial ribosomal protein L4 vs. UniProt/SwissProt
Match: sp|Q6G2W6|RL4_BARHE (50S ribosomal protein L4 OS=Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1) OX=283166 GN=rplD PE=3 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 1.844e-32 Identity = 67/204 (32.84%), Postives = 110/204 (53.92%), Query Frame = 2 Query: 251 LKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKL 862 +K D ++G L + VFG PR D++ +RWQ R + R +V RTG KM+ QKG+GRARH APQF GG + GP+ R++ LP +R LGL LS KL D+L +VD+ N+ L++ + ++L +E N S+ S IP+ ++P +NV+ +++ ++L+ ++ ++EE+ Sbjct: 5 IKTLDGNEVGKLKVSESVFGLVPREDILQRVVRWQLARRQQGTHQSQGRSDVSRTGAKMFKQKGTGRARHSSARAPQFRGGGKAHGPV-VRSHAHTLPKKIRALGLRFALSAKLKADDLIVVDEFNVKDAKTRMLVSCFSKLGFDNALLI--GGNEVDLNFSRATSNIPNIDILPIQGINVYDILRRSKLVLSKAAVEVLEERF 205
BLAST of Mitochondrial ribosomal protein L4 vs. TrEMBL
Match: A0A0V0G7Z9 (Putative mitochondrial 39s ribosomal protein l4 OS=Triatoma dimidiata OX=72491 PE=3 SV=1) HSP 1 Score: 247.669 bits (631), Expect = 1.203e-76 Identity = 110/216 (50.93%), Postives = 158/216 (73.15%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 P+QAW+E + P+++KLG +DLHPDVFGA PR+D+I+ N+RWQ +Y++V + R EV G+K WPQKG GRARHG +P F GG + GP P+ YF +LP R+LGLTSTLS+KL QD+LHIVD+L +PT+D ++L +L++ RNWG SVLF++ TD PRNI+ I H ++P Y +NV+S++K++T++LTL ++ IEEK++ L Sbjct: 58 PRQAWVENMNTPEEKKLGIIDLHPDVFGAMPRIDIIHENVRWQSLYKYVSYAHTKVRSEVRGGGRKPWPQKGLGRARHGSIRSPLFRGGGVIHGPRSPKTYFFMLPFYKRVLGLTSTLSVKLAQDDLHIVDNLEIPTEDPKFLEDLVQERNWGVSVLFIDDTDIMPRNITVAADNIKHMNLMPVYGLNVYSMLKHETLVLTLAAVEKIEEKILFQL 273
BLAST of Mitochondrial ribosomal protein L4 vs. TrEMBL
Match: A0A171BA10 (39s ribosomal protein mitochondrial (Fragment) OS=Triatoma infestans OX=30076 PE=3 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 7.002e-76 Identity = 111/216 (51.39%), Postives = 156/216 (72.22%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 P+QAW+E + P+++KLG +DLHPDVFG PR+D+I N+RWQ +Y++V + R EV G+K WPQKG GRARHG +P F GG + GP P+ YF +LP RLLGLTSTLS+KL QD+LHIVD+L +PT+D ++L +L++ RNWG SVLF++ TD PRNI+ I H ++P Y +NV+S++K++T++LTL +L IEEK++ L Sbjct: 27 PRQAWVENINTPEEKKLGIIDLHPDVFGVMPRIDIIQENVRWQSLYKYVCYAHTKVRNEVRGGGRKPWPQKGLGRARHGSIRSPLFRGGGVIHGPRSPKTYFFMLPFYKRLLGLTSTLSVKLAQDDLHIVDNLEIPTEDPKFLEDLVQERNWGVSVLFIDDTDIMPRNITVAADNIKHMNLMPVYGLNVYSMLKHETLVLTLAALEKIEEKILFQL 242
BLAST of Mitochondrial ribosomal protein L4 vs. TrEMBL
Match: A0A023F7M6 (Putative mitochondrial/ ribosomal protein l4 OS=Triatoma infestans OX=30076 PE=2 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 1.841e-75 Identity = 110/216 (50.93%), Postives = 156/216 (72.22%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 P+QAW+E + P+++KLG +DLHPDVFG PR+D+I N+RWQ +Y++V + R EV G+K WPQKG GRARHG +P F GG + GP P+ YF +LP RLLGLTSTLS+KL QD+LHIVD+L +PT+D ++L +L++ RNWG SVLF++ TD PRNI+ I H ++P Y +NV+S++K++T++LTL +L IE+K++ L Sbjct: 58 PRQAWVENINTPEEKKLGIIDLHPDVFGVMPRIDIIQENVRWQSLYKYVCYAHTKVRNEVRGGGRKPWPQKGLGRARHGSIRSPLFRGGGVIHGPRSPKTYFFMLPFYKRLLGLTSTLSVKLAQDDLHIVDNLEIPTEDHKFLEDLVQERNWGVSVLFIDDTDIMPRNITVAADNIKHMNLMPVYGLNVYSMLKHETLVLTLAALEKIEDKILFQL 273
BLAST of Mitochondrial ribosomal protein L4 vs. TrEMBL
Match: A0A069DS05 (Putative mitochondrial 39s ribosomal protein l4 OS=Panstrongylus megistus OX=65343 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 4.240e-75 Identity = 108/216 (50.00%), Postives = 156/216 (72.22%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 P+QAW+E + P+++KLG +DLHPDVFG PR+D+I+ N+RWQ +Y++V + R EV G+K WPQKG G+ARHG +P F GG + GP P+ YF +LP RLLGLTSTLS+KL QD+LHIVD L +PT++ ++L +L++ RNWG SVLF++ TD PRNI+ I H ++P Y +NV+S++K++T++LTL ++ IEEK++ L Sbjct: 58 PRQAWVENMNTPEEKKLGIIDLHPDVFGVMPRIDIIHENVRWQSLYKYVSYAHTKVRSEVRGGGRKPWPQKGLGKARHGSIRSPLFRGGGVIHGPRSPKTYFFMLPFYKRLLGLTSTLSVKLAQDDLHIVDTLEIPTEEPKFLEDLVQERNWGVSVLFIDDTDIMPRNITVAADNIKHMNLMPVYGLNVYSMLKHETLVLTLAAVEKIEEKILFQL 273
BLAST of Mitochondrial ribosomal protein L4 vs. TrEMBL
Match: A0A224XL40 (Putative mitochondrial/ ribosomal protein l4 OS=Panstrongylus lignarius OX=156445 PE=3 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 4.669e-75 Identity = 107/216 (49.54%), Postives = 157/216 (72.69%), Query Frame = 2 Query: 227 PKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSL 874 P+QAW+E + P+++KLG +DLHPDVFG PR+D+I N+RWQ +Y++V++ R EV G+K WPQKG G+ARHG +P F GG + GP P+ YF +LP RLLGLTSTLS+KL QD+LHIV++L +PT++ ++L +L++ RNWG SVLF++ TD PRNI+ I H ++P Y +NV+S++K++T++LTL ++ IEEK++ L Sbjct: 58 PRQAWVENMNTPEEKKLGIIDLHPDVFGVMPRIDIIQENVRWQSLYKYVNYAHTKVRSEVRGGGRKPWPQKGLGKARHGSIRSPLFRGGGVIHGPRSPKTYFYILPFYKRLLGLTSTLSVKLAQDDLHIVNNLEIPTEEPKFLEDLVQERNWGVSVLFIDDTDIMPRNITVAADNIKHMNLMPVYGLNVYSMLKHETLVLTLAAVEKIEEKILFQL 273
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Cavefish
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:103037881]) HSP 1 Score: 192.2 bits (487), Expect = 2.567e-58 Identity = 94/215 (43.72%), Postives = 137/215 (63.72%), Query Frame = 2 Query: 221 VKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 + P Q WL +L+ D LG +DLHPDVF RLD+++ WQ ++ + + K+ +R EV GKK W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR+ GL L+ KL QD LHIVD L +PT D YL +L++ R WG SVL V+ +E P+N+ + + +IPA +NV S++KY+T++LTL ++ +E+KL+ Sbjct: 67 LSPVQTWLHSLESQDSEPLGIVDLHPDVFAVPVRLDILHAVEVWQRNFKRISYAKVKSRAEVSGGGKKPWRQKGSGRARHGSIRSPIWRGGGVAHGPRGPTSYYYMLPMKVRVQGLKVALTSKLTQDCLHIVDSLEIPTPDPHYLQDLVKHRQWGNSVLIVDVGEEFPQNVLQATETLKTISIIPAIGLNVHSMLKYETLVLTLDTVKFLEKKLL 281
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Sea Lamprey
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:553771]) HSP 1 Score: 202.216 bits (513), Expect = 1.880e-63 Identity = 97/212 (45.75%), Postives = 144/212 (67.92%), Query Frame = 2 Query: 230 KQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 +QAWLE+L+ D +LG +DLHPDVFG PRLD+++ L WQ ++ + + K TR E+ G+K W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR+ GLT LS+K QD+LHIVD L++PT D +YL++L + R WG SVL V+ ++ P+NI + + V+PA +NV+S++KY T++LT+ ++ +E KL+ Sbjct: 25 RQAWLESLRGLDVDQLGLVDLHPDVFGVPPRLDILHQVLIWQKNFKRISYAKTKTRAEMRGGGRKPWNQKGSGRARHGSIRSPLWKGGGVAHGPRGPISYYYMLPMKVRVKGLTVALSVKHAQDDLHIVDSLDIPTADPQYLLDLAQYRQWGDSVLIVDVNEQMPKNILEATEKLKTITVMPALGLNVYSMLKYHTLVLTVDTVRFLERKLL 236
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Yeast
Match: YML6 (Mitochondrial ribosomal protein of the large subunit; has similarity to E. coli L4 ribosomal protein and human mitoribosomal MRP-L4 protein; essential for viability, unlike most other mitoribosomal proteins [Source:SGD;Acc:S000004487]) HSP 1 Score: 49.2914 bits (116), Expect = 3.039e-7 Identity = 38/140 (27.14%), Postives = 58/140 (41.43%), Query Frame = 2 Query: 212 NTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITT-----RPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIV 616 N + PK A + P L F+ + A R D++ W+ V D R++ R E + +K+ PQKGSGRAR GD +P G + P Y + LP V + + LS + L ++ Sbjct: 34 NAAIPPKYALVTVRSFPSLEPLTFVPVPTSTVAAPLRRDIL-----WRAVVYENDNRRVGASNPPGRSENGFSRRKLMPQKGSGRARVGDANSPTRHNGGRALARTAPNDYTTELPSKVYSMAFNNALSHQYKSGKLFVI 168
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Nematostella
Match: EDO48542 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ96]) HSP 1 Score: 123.25 bits (308), Expect = 1.310e-32 Identity = 75/210 (35.71%), Postives = 118/210 (56.19%), Query Frame = 2 Query: 233 QAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKL 862 AW+ + K DD+ LG ++L+ VFG PR+D+++ + WQ R + R EV G+K WPQKG +AR G AP F GG V GP PR+Y LP VR +GL LS++L Q +LHIV+ + DD++ L+ +++ R W +VL S +E + + + + V + VNV+S++ +IL+L ++ +EE+L Sbjct: 85 HAWVTSFK--DDKSLGMIELNDFVFGENPRIDILHRVVVWQRAKRRAGTACVKDRSEVRGGGRKPWPQKGLNKARQGSIRAPHFRGGGVVHGP-KPRSYEYTLPKKVRRMGLRVALSVRLAQGDLHIVESFDDIEDDQD-LMPILDQRGWQSAVLVDGSPNE---RLFEAAADLDKVDVFYSENVNVYSILLRHNLILSLDAVKQLEERL 287
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Nematostella
Match: EDO25703 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DVQ5]) HSP 1 Score: 58.9214 bits (141), Expect = 3.004e-10 Identity = 46/191 (24.08%), Postives = 88/191 (46.07%), Query Frame = 2 Query: 284 LDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNW-GKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIE 853 ++L +VFG P I L+++ + K R E+ + +K+ QKG+G AR G + F GG ++ GP PR Y L ++ L S LS + +NL +V++ + + +N+++ K LFV E+ N+ + V+ A ++ +S++ + V+ ++ +E Sbjct: 17 VELSSEVFGIEPNSHAIYLDVKQHLANKRQGTHKSKERAEITGSTRKIKKQKGTGTARAGSIKSGVFRGGGRMFGPR-PRNYSFKLNKNLKRLARKSALSTQAKDNNLVVVENFDFDAPKTKNFVNVLKALGLENKKSLFV--LAESNNNVYLSSRNLKSSKVVNASELSTYSVLNANKVVFMEGAIEGVE 204
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Medaka
Match: mrpl4 (mitochondrial ribosomal protein L4 [Source:NCBI gene;Acc:101158165]) HSP 1 Score: 198.364 bits (503), Expect = 1.410e-60 Identity = 110/289 (38.06%), Postives = 165/289 (57.09%), Query Frame = 2 Query: 59 KILSIFRSLNTSLVIFNQNTNENDNYEEPCD--LPP--------VIPSIVKRNLLESV----------SCSNTDVKPKQAWLETLKCPDDRKLGFLDLHPDVFGAFPRLDLINLNLRWQGVYRFVDWRKITTRPEVERTGKKMWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLI 865 K + +FR S+ +F + + + P + LPP V PS +KR + + + P Q W+E+L+ D LG +LHPDVFG PR+D+++ +WQ Y+ + + R EV GKK W QKGSGRARHG +P + GG GP GP +Y+ +LP+ VR+ GL LS K+ QD LH+VD L++PT D +YL++LI R+WG+SVL V+ +E P NI + S + +IPA +NV S++K++ V+LTL +L +E+KL+ Sbjct: 8 KFIEMFR---FSVAVFGRGVAKRFSSSFPAEGALPPNLQLPANLVDPSRLKRPPPPADCPLPLLRRCEAVVPAHLSPMQTWVESLQMEDGEPLGRAELHPDVFGVSPRIDILHDVEKWQRNYKRISYAHTKVRSEVRGGGKKPWRQKGSGRARHGSIRSPLWRGGGVSHGPRGPTSYYYMLPMKVRVQGLKVALSFKMAQDYLHVVDSLHIPTPDSQYLLDLIRRRHWGESVLIVDVAEEFPENILQAASDLKKVNLIPAIGLNVHSMLKHEAVVLTLETLKFLEDKLL 293
BLAST of Mitochondrial ribosomal protein L4 vs. Planmine SMEST
Match: SMESG000041898.1 (SMESG000041898.1) HSP 1 Score: 405.216 bits (1040), Expect = 1.301e-143 Identity = 195/196 (99.49%), Postives = 196/196 (100.00%), Query Frame = 2 Query: 425 MWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVSLKNPAVDMKSTRSFQHFRHSNHDSWDQRQNTNFRGNPATHDDYLEYQ 1012 MWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIV+LKNPAVDMKSTRSFQHFRHSNHDSWDQRQNTNFRGNPATHDDYLEYQ Sbjct: 1 MWPQKGSGRARHGDRTAPQFIGGAQVKGPLGPRAYFSVLPIGVRLLGLTSTLSIKLFQDNLHIVDDLNLPTDDKEYLINLIEGRNWGKSVLFVNSTDEAPRNISKICSLIPHYMVIPAYAVNVWSLIKYDTVILTLPSLNIIEEKLIVNLKNPAVDMKSTRSFQHFRHSNHDSWDQRQNTNFRGNPATHDDYLEYQ 196 The following BLAST results are available for this feature:
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 2
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Mitochondrial ribosomal protein L4 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Mitochondrial ribosomal protein L4 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Mitochondrial ribosomal protein L4 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of Mitochondrial ribosomal protein L4 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30027556 ID=SMED30027556|Name=Mitochondrial ribosomal protein L4|organism=Schmidtea mediterranea sexual|type=transcript|length=1105bpback to top protein sequence of SMED30027556-orf-1 >SMED30027556-orf-1 ID=SMED30027556-orf-1|Name=SMED30027556-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=331bp MIKIFKLSNREFKILSIFRSLNTSLVIFNQNTNENDNYEEPCDLPPVIPSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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