Ubiquitin-like domain-containing protein

Overview


Name	Ubiquitin-like domain-containing protein
Smed ID	SMED30027506
Length (bp)	348

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Ubiquitin-like domain-containing protein (SMED30027506) t-SNE clustered cells

Violin plots show distribution of expression levels for Ubiquitin-like domain-containing protein (SMED30027506) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ubiquitin-like domain-containing protein (SMED30027506) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ubiquitin-like domain-containing protein (SMED30027506) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30027506

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Published Transcript	Transcriptome	Publication
gut	SMED30027506	dd_Smed_v4_14332_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30027506	dd_Smed_v4_14332_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30027506	dd_Smed_v4_14332_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027506	Contig44216	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027506	Contig44216	uc_Smed_v2	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: UBA52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:HGNC:12458])

HSP 1 Score: 55.0694 bits (131), Expect = 7.010e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 55.0694 bits (131), Expect = 7.059e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 56.225 bits (134), Expect = 1.429e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 55.0694 bits (131), Expect = 4.376e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 56.225 bits (134), Expect = 1.593e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 55.0694 bits (131), Expect = 4.770e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Match: UBC (ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468])

HSP 1 Score: 56.225 bits (134), Expect = 1.629e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 55.0694 bits (131), Expect = 4.638e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubq-2 (Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632])

HSP 1 Score: 55.8398 bits (133), Expect = 4.690e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  454 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517

HSP 6 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  530 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593

HSP 7 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  606 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669

HSP 8 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  682 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745

HSP 9 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  758 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821

HSP 10 Score: 55.8398 bits (133), Expect = 3.731e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 11 Score: 55.4546 bits (132), Expect = 6.004e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

[Close]

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  454 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517

HSP 6 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  530 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 593

HSP 7 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  606 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 669

HSP 8 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  682 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 745

HSP 9 Score: 57.3806 bits (137), Expect = 1.346e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  758 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 821

HSP 10 Score: 55.8398 bits (133), Expect = 3.731e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 11 Score: 55.4546 bits (132), Expect = 6.004e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 55.8398 bits (133), Expect = 3.715e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 6 Score: 55.4546 bits (132), Expect = 6.036e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 56.9954 bits (136), Expect = 1.354e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 55.8398 bits (133), Expect = 3.715e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 6 Score: 55.4546 bits (132), Expect = 6.036e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0334787)

HSP 1 Score: 54.6842 bits (130), Expect = 1.586e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0077470)

HSP 1 Score: 54.6842 bits (130), Expect = 1.586e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Match: RpS27A (gene:FBgn0003942 transcript:FBtr0080016)

HSP 1 Score: 54.6842 bits (130), Expect = 2.664e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0345892)

HSP 1 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

HSP 6 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  454 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517

HSP 7 Score: 55.0694 bits (131), Expect = 9.293e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0070933)

HSP 1 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

HSP 6 Score: 56.225 bits (134), Expect = 3.353e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  454 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517

HSP 7 Score: 55.0694 bits (131), Expect = 9.293e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 55.0694 bits (131), Expect = 6.107e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7])

HSP 1 Score: 54.6842 bits (130), Expect = 2.084e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018])

HSP 1 Score: 55.0694 bits (131), Expect = 3.021e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 55.0694 bits (131), Expect = 1.030e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 55.0694 bits (131), Expect = 2.877e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: ENSXETT00000033679.1 (ubiquitin C [Source:NCBI gene;Acc:448120])

HSP 1 Score: 56.225 bits (134), Expect = 3.829e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.225 bits (134), Expect = 3.829e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 55.0694 bits (131), Expect = 1.114e-9
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 55.0694 bits (131), Expect = 4.215e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Match: pdcd11 (programmed cell death 11 [Source:Xenbase;Acc:XB-GENE-967218])

HSP 1 Score: 56.225 bits (134), Expect = 6.660e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.225 bits (134), Expect = 6.660e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 56.225 bits (134), Expect = 6.660e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 56.225 bits (134), Expect = 6.660e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 55.0694 bits (131), Expect = 1.758e-9
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 6 Score: 53.5286 bits (127), Expect = 6.332e-9
Identity = 28/79 (35.44%), Postives = 47/79 (59.49%), Query Frame = 3

Query:   69 LTWLIQ-ISESAIDSRISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            ++W  + I   +  S+  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R L+DY I
Sbjct:  407 ISWTFELILNVSFTSQSIMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDCRSLADYNI 485

HSP 7 Score: 53.1434 bits (126), Expect = 7.614e-9
Identity = 25/64 (39.06%), Postives = 39/64 (60.94%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R L DY I
Sbjct:  574 RGGMQIFVKTLTGKTITLEVEPSDTIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNI 637

HSP 8 Score: 53.1434 bits (126), Expect = 8.722e-9
Identity = 25/64 (39.06%), Postives = 38/64 (59.38%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+K KIQ  EGIP + Q LIF G +L D R L DY I
Sbjct:  498 RGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLCDYNI 561

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Gm8797 (predicted pseudogene 8797 [Source:MGI Symbol;Acc:MGI:3643769])

HSP 1 Score: 54.6842 bits (130), Expect = 7.989e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 55.0694 bits (131), Expect = 1.085e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Ubc (ubiquitin C [Source:MGI Symbol;Acc:MGI:98889])

HSP 1 Score: 56.225 bits (134), Expect = 1.970e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 55.0694 bits (131), Expect = 5.822e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Gm11808 (predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356])

HSP 1 Score: 55.0694 bits (131), Expect = 2.179e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 55.0694 bits (131), Expect = 2.179e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P62975|UBIQ_RABIT (Ubiquitin OS=Oryctolagus cuniculus OX=9986 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.492e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P68197|UBIQ_CERCA (Ubiquitin OS=Ceratitis capitata OX=7213 PE=1 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.492e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|Q865C5|UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 4.492e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P49632|RL40_CAEEL (Ubiquitin-60S ribosomal protein L40 OS=Caenorhabditis elegans OX=6239 GN=ubq-2 PE=3 SV=2)

HSP 1 Score: 55.8398 bits (133), Expect = 5.965e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Match: sp|P19848|UBIQ_COPCO (Ubiquitin OS=Coprinellus congregatus OX=5347 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 6.627e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A1E3IKF6 (Ubiquitin-60S ribosomal protein L40 OS=Cryptococcus depauperatus CBS 7841 OX=1295531 GN=L203_02797 PE=4 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 5.336e-10
Identity = 34/92 (36.96%), Postives = 48/92 (52.17%), Query Frame = 3

Query:   27 VNFR*NMLIINFIYLTWLIQISESAIDSRISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
             N R ++   N    ++L  +       R S   YL S  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   11 ANLRQDVCSFNLPLHSYLPDVESCWEKERCSDWYYLCSLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 102

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A5C3KIE3 (Ubiquitin-domain-containing protein OS=Coprinopsis marcescibilis OX=230819 GN=FA15DRAFT_673988 PE=4 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.176e-9
Identity = 31/60 (51.67%), Postives = 41/60 (68.33%), Query Frame = 3

Query:  123 HVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
             V+++S  GK TI+ +  +D V N+KAKIQ  EGIP + Q LIF G +L DSR +SDY I
Sbjct:  132 QVFVISLTGKKTILEVSSDDTVGNVKAKIQDKEGIPPDQQRLIFAGRQLEDSRTMSDYNI 191

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A1D2A7Y9 (Ubiquitin-like domain-containing protein (Fragment) OS=Auxenochlorella protothecoides OX=3075 GN=g.16589 PE=4 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 5.252e-9
Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 3

Query:   96 SAIDSRISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            +  + R ++ +++ +  GK   + ++ ND + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   21 TVAEGRATMQIFVKTLTGKTITLEVESNDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 89

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A1Q3E5S6 (Ubiquitin-60S ribosomal protein L40 fusion protein OS=Lentinula edodes OX=5353 GN=LENED_004256 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 8.764e-9
Identity = 28/67 (41.79%), Postives = 43/67 (64.18%), Query Frame = 3

Query:  102 IDSRISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +RI + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    9 VSTRIKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 75

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Match: A0A453CNS5 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 9.908e-9
Identity = 34/94 (36.17%), Postives = 53/94 (56.38%), Query Frame = 3

Query:   21 ILVNFR*NMLIINFIYLTWLIQISESAIDSRISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
             LV F   + ++ F+ LT L        DS + + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R L+DY I
Sbjct:    1 CLVCFVILICLVCFLSLTILFW------DSSLQMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNI 88

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 54.6842 bits (130), Expect = 1.766e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:103044043])

HSP 1 Score: 55.0694 bits (131), Expect = 2.560e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Match: si:ch211-202a12.4 (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 56.6102 bits (135), Expect = 3.136e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   81 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 144

HSP 2 Score: 56.6102 bits (135), Expect = 3.136e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  157 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 220

HSP 3 Score: 53.5286 bits (127), Expect = 3.702e-9
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 3

Query:  144 NGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
             GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  320 TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 372

HSP 4 Score: 50.447 bits (119), Expect = 4.532e-8
Identity = 24/41 (58.54%), Postives = 28/41 (68.29%), Query Frame = 3

Query:  180 DIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   28 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 68

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Match: nedd8l (NEDD8-like [Source:NCBI gene;Acc:103044361])

HSP 1 Score: 42.743 bits (99), Expect = 3.020e-6
Identity = 20/53 (37.74%), Postives = 32/53 (60.38%), Query Frame = 3

Query:  144 NGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
             GK   I ++  D V  +K ++++ EGIP   Q LI++G ++ D +  SDYKI
Sbjct:    9 TGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTASDYKI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Sea Lamprey
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 55.8398 bits (133), Expect = 9.315e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   87 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 150

HSP 2 Score: 55.8398 bits (133), Expect = 9.315e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  163 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 226

HSP 3 Score: 55.8398 bits (133), Expect = 9.315e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  239 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 302

HSP 4 Score: 55.8398 bits (133), Expect = 9.315e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  315 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 378

HSP 5 Score: 54.6842 bits (130), Expect = 2.509e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   14 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 74

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Match: RPL40B (Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802])

HSP 1 Score: 53.1434 bits (126), Expect = 1.005e-10
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Match: RPL40A (Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410])

HSP 1 Score: 53.1434 bits (126), Expect = 1.005e-10
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Match: RPS31 (Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog [Source:SGD;Acc:S000004157])

HSP 1 Score: 52.7582 bits (125), Expect = 1.960e-10
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Match: UBI4 (Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003962])

HSP 1 Score: 54.299 bits (129), Expect = 2.084e-10
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 54.299 bits (129), Expect = 2.084e-10
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 54.299 bits (129), Expect = 2.084e-10
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 54.299 bits (129), Expect = 2.084e-10
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 53.1434 bits (126), Expect = 5.615e-10
Identity = 25/61 (40.98%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+K+KIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Match: RUB1 (Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme) [Source:SGD;Acc:S000002546])

HSP 1 Score: 42.3578 bits (98), Expect = 5.003e-7
Identity = 19/55 (34.55%), Postives = 34/55 (61.82%), Query Frame = 3

Query:  144 NGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKIVN 308
             GK   + +K +D+VY++K  +++ EGIP + Q LIF G ++ D   ++D  +V 
Sbjct:    9 TGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVE 63

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Match: EDO31255 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYF9])

HSP 1 Score: 55.0694 bits (131), Expect = 1.767e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Match: EDO32403 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV54])

HSP 1 Score: 56.225 bits (134), Expect = 7.664e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 55.0694 bits (131), Expect = 2.276e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 3 Score: 55.0694 bits (131), Expect = 2.346e-10
Identity = 26/64 (40.62%), Postives = 39/64 (60.94%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q  IF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNI 213

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25])

HSP 1 Score: 55.0694 bits (131), Expect = 8.921e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Match: EDO45561 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSG9])

HSP 1 Score: 54.6842 bits (130), Expect = 1.055e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

HSP 2 Score: 42.3578 bits (98), Expect = 4.420e-6
Identity = 22/56 (39.29%), Postives = 34/56 (60.71%), Query Frame = 3

Query:  135 VSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            V  + K   + ++ +D V ++K KIQ  EGIP   Q L++   EL+D+R L+DY I
Sbjct:   81 VKAHWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNI 136

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Match: EDO32547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUP6])

HSP 1 Score: 56.225 bits (134), Expect = 1.377e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.225 bits (134), Expect = 1.377e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 56.225 bits (134), Expect = 1.377e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  226 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 289

HSP 4 Score: 56.225 bits (134), Expect = 1.377e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  302 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 365

HSP 5 Score: 56.225 bits (134), Expect = 1.377e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  378 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 441

HSP 6 Score: 56.225 bits (134), Expect = 1.377e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  454 RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 517

HSP 7 Score: 55.0694 bits (131), Expect = 3.855e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000015052.2 (pep primary_assembly:ASM223467v1:12:2267197:2268484:1 gene:ENSORLG00000012019.2 transcript:ENSORLT00000015052.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.8398 bits (133), Expect = 6.937e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:101169681])

HSP 1 Score: 55.4546 bits (132), Expect = 9.980e-11
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: ENSORLT00000001484.2 (pep primary_assembly:ASM223467v1:12:2266741:2269204:1 gene:ENSORLG00000001204.2 transcript:ENSORLT00000001484.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 53.9138 bits (128), Expect = 1.716e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 55.0694 bits (131), Expect = 2.491e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 55.0694 bits (131), Expect = 3.092e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000039444.1 (SMESG000039444.1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.200e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.9954 bits (136), Expect = 8.200e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 55.8398 bits (133), Expect = 2.367e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000014081.1 (SMESG000014081.1)

HSP 1 Score: 56.9954 bits (136), Expect = 8.200e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 56.9954 bits (136), Expect = 8.200e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 55.8398 bits (133), Expect = 2.367e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000025683.1 (SMESG000025683.1)

HSP 1 Score: 55.8398 bits (133), Expect = 8.541e-11
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 54.6842 bits (130), Expect = 2.532e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000066693.1 (SMESG000066693.1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.117e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

[Close]

BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Match: SMESG000055743.1 (SMESG000055743.1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.325e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:   74 RGGMQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 137

HSP 2 Score: 55.8398 bits (133), Expect = 2.205e-10
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 3

Query:  111 RISIHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            R  + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:  150 RGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 213

HSP 3 Score: 55.0694 bits (131), Expect = 3.780e-10
Identity = 26/61 (42.62%), Postives = 39/61 (63.93%), Query Frame = 3

Query:  120 IHVYLVSENGKNTIIPMKLNDIVYNLKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKI 302
            + +++ +  GK   + ++ +D + N+KAKIQ  EGIP + Q LIF G +L D R LSDY I
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 61

The following BLAST results are available for this feature:

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Sea Lamprey
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
UBA52	7.010e-11	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
UBC	7.059e-11	42.62	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBB	1.429e-10	42.19	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
UBC	1.593e-10	42.19	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]
UBC	1.629e-10	42.19	ubiquitin C [Source:HGNC Symbol;Acc:HGNC:12468]	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubq-2	4.690e-11	42.62	Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ...	[more]
ubq-1	1.346e-10	42.19	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	1.346e-10	42.19	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	1.354e-10	42.19	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	1.354e-10	42.19	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RpL40	1.586e-10	42.62	gene:FBgn0003941 transcript:FBtr0334787	[more]
RpL40	1.586e-10	42.62	gene:FBgn0003941 transcript:FBtr0077470	[more]
RpS27A	2.664e-10	42.62	gene:FBgn0003942 transcript:FBtr0080016	[more]
Ubi-p5E	3.353e-10	42.19	gene:FBgn0086558 transcript:FBtr0345892	[more]
Ubi-p5E	3.353e-10	42.19	gene:FBgn0086558 transcript:FBtr0070933	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubb	6.107e-11	42.62	ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]	[more]
uba52	2.084e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
rps27a	3.021e-10	42.62	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rps27a	3.021e-10	42.62	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rps27a	3.021e-10	42.62	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	1.030e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
uba52	2.877e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ENSXETT00000033679.1	3.829e-10	42.19	ubiquitin C [Source:NCBI gene;Acc:448120]	[more]
rps27a	4.215e-10	42.62	ribosomal protein S27a [Source:NCBI gene;Acc:54892...	[more]
pdcd11	6.660e-10	42.19	programmed cell death 11 [Source:Xenbase;Acc:XB-GE...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Gm8797	7.989e-11	42.62	predicted pseudogene 8797 [Source:MGI Symbol;Acc:M...	[more]
Uba52	1.085e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
Ubc	1.970e-10	42.19	ubiquitin C [Source:MGI Symbol;Acc:MGI:98889]	[more]
Gm11808	2.179e-10	42.62	predicted gene 11808 [Source:MGI Symbol;Acc:MGI:36...	[more]
Uba52	2.179e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P62975\|UBIQ_RABIT	4.492e-10	42.62	Ubiquitin OS=Oryctolagus cuniculus OX=9986 PE=1 SV...	[more]
sp\|P68197\|UBIQ_CERCA	4.492e-10	42.62	Ubiquitin OS=Ceratitis capitata OX=7213 PE=1 SV=1	[more]
sp\|Q865C5\|UBIQ_CAMDR	4.492e-10	42.62	Ubiquitin OS=Camelus dromedarius OX=9838 PE=3 SV=2	[more]
sp\|P49632\|RL40_CAEEL	5.965e-10	42.62	Ubiquitin-60S ribosomal protein L40 OS=Caenorhabdi...	[more]
sp\|P19848\|UBIQ_COPCO	6.627e-10	42.62	Ubiquitin OS=Coprinellus congregatus OX=5347 PE=1 ...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1E3IKF6	5.336e-10	36.96	Ubiquitin-60S ribosomal protein L40 OS=Cryptococcu...	[more]
A0A5C3KIE3	2.176e-9	51.67	Ubiquitin-domain-containing protein OS=Coprinopsis...	[more]
A0A1D2A7Y9	5.252e-9	40.58	Ubiquitin-like domain-containing protein (Fragment...	[more]
A0A1Q3E5S6	8.764e-9	41.79	Ubiquitin-60S ribosomal protein L40 fusion protein...	[more]
A0A453CNS5	9.908e-9	36.17	Uncharacterized protein OS=Aegilops tauschii subsp...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
uba52	1.766e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
uba52	1.766e-10	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
rps27a	2.560e-10	42.62	ribosomal protein S27a [Source:NCBI gene;Acc:10304...	[more]
si:ch211-202a12.4	3.136e-10	42.19	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
nedd8l	3.020e-6	37.74	NEDD8-like [Source:NCBI gene;Acc:103044361]	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
UBB	9.315e-11	42.19	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RPL40B	1.005e-10	40.98	Ubiquitin-ribosomal 60S subunit protein L40B fusio...	[more]
RPL40A	1.005e-10	40.98	Ubiquitin-ribosomal 60S subunit protein L40A fusio...	[more]
RPS31	1.960e-10	40.98	Fusion protein cleaved to yield ribosomal protein ...	[more]
UBI4	2.084e-10	40.63	Ubiquitin; becomes conjugated to proteins, marking...	[more]
RUB1	5.003e-7	34.55	Ubiquitin-like protein with similarity to mammalia...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO31255	1.767e-11	42.62	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32403	7.664e-11	42.19	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO48503	8.921e-11	42.62	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45561	1.055e-10	42.62	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32547	1.377e-10	42.19	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000015052.2	6.937e-11	42.62	pep primary_assembly:ASM223467v1:12:2267197:226848...	[more]
uba52	9.980e-11	42.62	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ENSORLT00000001484.2	1.716e-10	42.62	pep primary_assembly:ASM223467v1:12:2266741:226920...	[more]
rps27a	2.491e-10	42.62	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]
rps27a	3.092e-10	42.62	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]

BLAST of Ubiquitin-like domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000039444.1	8.200e-11	42.19	SMESG000039444.1	[more]
SMESG000014081.1	8.200e-11	42.19	SMESG000014081.1	[more]
SMESG000025683.1	8.541e-11	42.19	SMESG000025683.1	[more]
SMESG000066693.1	1.117e-10	42.62	SMESG000066693.1	[more]
SMESG000055743.1	1.325e-10	42.19	SMESG000055743.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30027506 ID=SMED30027506|Name=Ubiquitin-like domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=348bp
ATAATATTTTCAGTTATAAAATATTAGTAAATTTTAGATAAAACATGCTT
ATCATAAATTTTATATATTTAACATGGTTGATTCAAATTTCTGAATCAGC
AATAGATTCCAGAATTTCTATTCATGTTTATTTGGTTTCGGAGAACGGAA
AAAATACAATTATTCCGATGAAACTAAATGATATTGTTTATAATTTGAAA
GCAAAAATTCAGAAAATTGAAGGAATTCCTACAAATAATCAGATTTTAAT
TTTTAATGGAACGGAATTAATTGACAGTCGTATTTTATCGGATTATAAAA
TTGTAAATCATTCTATAATCAAAGTTAAAGTAAAATCCAAATAAAAAT

protein sequence of SMED30027506-orf-1

>SMED30027506-orf-1 ID=SMED30027506-orf-1|Name=SMED30027506-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=100bp
MLIINFIYLTWLIQISESAIDSRISIHVYLVSENGKNTIIPMKLNDIVYN
LKAKIQKIEGIPTNNQILIFNGTELIDSRILSDYKIVNHSIIKVKVKSK*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding

Vocabulary: **cellular component**
Term	Definition
GO:0005840	ribosome

Vocabulary: **biological process**
Term	Definition
GO:0006412	translation

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR019954	Ubiquitin_CS
IPR029071	Ubiquitin-like_domsf

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 36..56 score: 35.6 coord: 57..77 score: 50.5 coord: 78..99 score: 28.58
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 26..97 e-value: 3.4E-7 score: 39.9
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 33..97 e-value: 5.4E-15 score: 54.9
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 26..99 score: 16.777
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 24..99 e-value: 2.3E-18 score: 67.4
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 25..96
None	No IPR available	PANTHER	PTHR10666:SF318		coord: 25..96
None	No IPR available	CDD	cd17039	Ubl_ubiquitin_like	coord: 28..94 e-value: 5.83064E-13 score: 56.4506
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..18 score: 0.614
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 52..77
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 25..97