Troponin i

Overview


Name	Troponin i
Smed ID	SMED30027460
Length (bp)	1409

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Troponin i (SMED30027460) t-SNE clustered cells

Violin plots show distribution of expression levels for Troponin i (SMED30027460) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Troponin i (SMED30027460) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Troponin i (SMED30027460) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30027460

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 22

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig32120	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig32120	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig22359	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig28180	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig28180	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig1023	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0022312	Contig1023	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig37465	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig37465	newmark_ests	PMID:29674431 Fincher et al., 2018
nervous system	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig34101	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30027460	h1SMcG0008650	Contig34101	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30027460	h1SMcG0008650	dd_Smed_v6_323_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
pharynx musculature	SMED30027460	h1SMcG0008650	dd_Smed_v6_323_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
musculature system	SMED30027460	h1SMcG0008650	dd_Smed_v6_323_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
muscle progenitor cell	SMED30027460	h1SMcG0008650	dd_Smed_v6_323_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
Category 2 cell	SMED30027460	h1SMcG0008650	dd_Smed_v4_323_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Troponin i vs. Ensembl Human
Match: TNNI3 (troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947])

HSP 1 Score: 65.0846 bits (157), Expect = 1.726e-11
Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKL--ARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            L T   PL +  +     + LC+QLH R+++++EE+YD E K+     +I +LT K+ D++GKF +P L++V  +   +  A +G    K+SL   R  LK   +     E +E G     DWR+++
Sbjct:   76 LSTRCQPLELAGLGFAELQDLCRQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRISADAMMQALLGAR-AKESLD-LRAHLKQVKKEDTEKENREVG-----DWRKNI 195

[Close]

BLAST of Troponin i vs. Ensembl Human
Match: TNNI3 (troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947])

HSP 1 Score: 62.7734 bits (151), Expect = 6.074e-11
Identity = 41/127 (32.28%), Postives = 69/127 (54.33%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKL--ARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            L T   PL +  +     + LC+QLH R+++++EE+YD E K+     +I +LT K+ D++GKF +P L++V  +   +  A +G    K+SL   R  LK   +     E +E G     DWR+++
Sbjct:   51 LSTRCQPLELAGLGFAELQDLCRQLHARVDKVDEERYDIEAKVTKNITEIADLTQKIFDLRGKFKRPTLRRVRISADAMMQALLG-ARAKESLD-LRAHLKQVKKEDTEKENREVG-----DWRKNI 170

[Close]

BLAST of Troponin i vs. Ensembl Human
Match: TNNI3 (troponin I3, cardiac type [Source:HGNC Symbol;Acc:HGNC:11947])

HSP 1 Score: 61.2326 bits (147), Expect = 3.913e-10
Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKI-----------RNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKL--ARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            L T   PL +  +     + LC+QLH R+++++EE+YD E K+            +  F I +LT K+ D++GKF +P L++V  +   +  A +G    K+SL   R  LK   +     E +E G     DWR+++
Sbjct:   76 LSTRCQPLELAGLGFAELQDLCRQLHARVDKVDEERYDIEAKVTKNITEVGRMGSSGTFGIADLTQKIFDLRGKFKRPTLRRVRISADAMMQALLG-ARAKESLD-LRAHLKQVKKEDTEKENREVG-----DWRKNI 206

[Close]

BLAST of Troponin i vs. Ensembl Human
Match: TNNI2 (troponin I2, fast skeletal type [Source:HGNC Symbol;Acc:HGNC:11946])

HSP 1 Score: 56.6102 bits (135), Expect = 7.980e-9
Identity = 39/127 (30.71%), Postives = 65/127 (51.18%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            N L     PL+I     +  + LCKQLH +I+  EEEKYD EV+++    ++ ++  K+ D++GKF +P L++V  +   + +     + +     R  LK   Q K    EKE       DWR+++
Sbjct:   43 NYLAEHCPPLHIPG-SMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLK---QVKKEDTEKERDLRDVGDWRKNI 165

[Close]

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            N L     PL+I     +  + LCKQLH +I+  EEEKYD EV+++    ++ ++  K+ D++GKF +P L++V  +   + +     + +     R  LK   Q K    EKE       DWR+++
Sbjct:   43 NYLAEHCPPLHIPG-SMSEVQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLK---QVKKEDTEKERDLRDVGDWRKNI 165

[Close]

BLAST of Troponin i vs. Ensembl Celegans
Match: tni-4 (Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44572])

HSP 1 Score: 88.9669 bits (219), Expect = 2.651e-20
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDW 1141
            L+  + PL  D  +E+  +A+  ++ ER+  LE E YD    +R ++F+INELT+ VND++GKFVKP LKKV+KTE K  ++ K E  +    FR QLK   +N+FAL+E++     K  W
Sbjct:   75 LQERIIPLP-DLDNEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKV--DFRAQLKVVDKNEFALDEEDTEKKEKAAW 192

[Close]

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDW 1141
            L+  + PL  D  +E+  +A+  ++ ER+  LE E YD    +R ++F+INELT+ VND++GKFVKP LKKV+KTE K  ++ K E  +    FR QLK   +N+FAL+E++     K  W
Sbjct:   75 LQERIIPLP-DLDNEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKV--DFRAQLKVVDKNEFALDEEDTEKKEKAAW 192

[Close]

BLAST of Troponin i vs. Ensembl Celegans
Match: unc-27 (Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9GYF1])

HSP 1 Score: 68.1662 bits (165), Expect = 1.084e-12
Identity = 40/99 (40.40%), Postives = 64/99 (64.65%), Query Frame = 2

Query:  782 KTVVGPLNIDSVDENS-CKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
            +T+  P N+DS+D+    + +   L  R+ +LEEEKYD    +   E +IN LT++VND++GKFVKP LKKV+K ++K  + G+++   + + FR  LK
Sbjct:   79 RTISLP-NVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLTIEVNDLRGKFVKPSLKKVSKYDNKFKKSGESKA-GTKEDFRANLK 175

[Close]

BLAST of Troponin i vs. Ensembl Celegans
Match: tni-3 (Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9XUN9])

HSP 1 Score: 66.6254 bits (161), Expect = 3.473e-12
Identity = 39/99 (39.39%), Postives = 63/99 (63.64%), Query Frame = 2

Query:  782 KTVVGPLNIDSV-DENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
            +T+  P ++DS+ D+     + + +  R+  LEEEK+D    +   E +IN+LT++VND++GKFVKP LKKV+K ++K    G+ +EK +   FR  LK
Sbjct:   91 RTIPLP-DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSN---FRNNLK 185

[Close]

Query:  782 KTVVGPLNIDSV-DENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
            +T+  P ++DS+ D+     + + +  R+  LEEEK+D    +   E +IN+LT++VND++GKFVKP LKKV+K ++K    G+ +EK +   FR  LK
Sbjct:   91 RTIPLP-DVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVNDLRGKFVKPTLKKVSKYDNKFKSSGEVKEKSN---FRNNLK 185

[Close]

BLAST of Troponin i vs. Ensembl Fly
Match: wupA (gene:FBgn0283471 transcript:FBtr0308237)

HSP 1 Score: 85.1149 bits (209), Expect = 8.726e-19
Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2

Query:  794 GPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
             P N+    E++ K+L KQ ++RIN+LE++KYD E  ++ ++ +IN+L  +VND++GKFVKP LKKV+K E+K A++ K   K +   FR QLK
Sbjct:   80 SPRNLSDASEDTLKSLIKQHYDRINKLEDQKYDLEYVVKRKDVEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQK---KAAEFNFRNQLK 170

[Close]

BLAST of Troponin i vs. Ensembl Fly
Match: wupA (gene:FBgn0283471 transcript:FBtr0336897)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-18
Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2

Query:  794 GPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
             P N+    E++ K+L KQ ++RIN+LE++KYD E  ++ ++ +IN+L  +VND++GKFVKP LKKV+K E+K A++ K   K +   FR QLK
Sbjct:   56 SPRNLSDASEDTLKSLIKQHYDRINKLEDQKYDLEYVVKRKDVEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQK---KAAEFNFRNQLK 146

[Close]

BLAST of Troponin i vs. Ensembl Fly
Match: wupA (gene:FBgn0283471 transcript:FBtr0336896)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-18
Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2

Query:  794 GPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
             P N+    E++ K+L KQ ++RIN+LE++KYD E  ++ ++ +IN+L  +VND++GKFVKP LKKV+K E+K A++ K   K +   FR QLK
Sbjct:   56 SPRNLSDASEDTLKSLIKQHYDRINKLEDQKYDLEYVVKRKDVEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQK---KAAEFNFRNQLK 146

[Close]

BLAST of Troponin i vs. Ensembl Fly
Match: wupA (gene:FBgn0283471 transcript:FBtr0336895)

HSP 1 Score: 83.9593 bits (206), Expect = 1.256e-18
Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2

Query:  794 GPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
             P N+    E++ K+L KQ ++RIN+LE++KYD E  ++ ++ +IN+L  +VND++GKFVKP LKKV+K E+K A++ K   K +   FR QLK
Sbjct:   56 SPRNLSDASEDTLKSLIKQHYDRINKLEDQKYDLEYVVKRKDVEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQK---KAAEFNFRNQLK 146

[Close]

BLAST of Troponin i vs. Ensembl Fly
Match: wupA (gene:FBgn0283471 transcript:FBtr0074520)

HSP 1 Score: 84.7297 bits (208), Expect = 1.260e-18
Identity = 43/94 (45.74%), Postives = 66/94 (70.21%), Query Frame = 2

Query:  794 GPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
             P N+    E++ K+L KQ ++RIN+LE++KYD E  ++ ++ +IN+L  +VND++GKFVKP LKKV+K E+K A++ K   K +   FR QLK
Sbjct:   80 SPRNLSDASEDTLKSLIKQHYDRINKLEDQKYDLEYVVKRKDVEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQK---KAAEFNFRNQLK 170

[Close]

BLAST of Troponin i vs. Ensembl Zebrafish
Match: tnni1d (troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-GENE-040718-374])

HSP 1 Score: 69.707 bits (169), Expect = 2.039e-13
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PL +  +     + LCKQL+ +I+ ++EE+YD+E K++    DINEL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   62 PLQLSGLSLEELQNLCKQLYSKIDTVDEERYDYEDKVKKHNKDINELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 156

[Close]

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PL +  +     + LCKQL+ +I+ ++EE+YD+E K++    DINEL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   62 PLQLSGLSLEELQNLCKQLYSKIDTVDEERYDYEDKVKKHNKDINELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 156

[Close]

BLAST of Troponin i vs. Ensembl Zebrafish
Match: tnni1d (troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-GENE-040718-374])

HSP 1 Score: 69.707 bits (169), Expect = 2.244e-13
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PL +  +     + LCKQL+ +I+ ++EE+YD+E K++    DINEL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   62 PLQLSGLSLEELQNLCKQLYSKIDTVDEERYDYEDKVKKHNKDINELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 156

[Close]

BLAST of Troponin i vs. Ensembl Zebrafish
Match: tnni1d (troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-GENE-040718-374])

HSP 1 Score: 69.707 bits (169), Expect = 2.244e-13
Identity = 35/95 (36.84%), Postives = 55/95 (57.89%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PL +  +     + LCKQL+ +I+ ++EE+YD+E K++    DINEL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   62 PLQLSGLSLEELQNLCKQLYSKIDTVDEERYDYEDKVKKHNKDINELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 156

[Close]

BLAST of Troponin i vs. Ensembl Zebrafish
Match: tnni1c (troponin I, skeletal, slow c [Source:ZFIN;Acc:ZDB-GENE-060825-192])

HSP 1 Score: 69.707 bits (169), Expect = 2.308e-13
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PL I  +     + LC+QLH +I+ ++EE+YD+E K+     DI+EL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   63 PLQITGLQLEELQKLCRQLHAKIDSVDEERYDFEAKVVKNNKDIHELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 157

[Close]

BLAST of Troponin i vs. Ensembl Xenopus
Match: thbs1 (thrombospondin 1 [Source:Xenbase;Acc:XB-GENE-486189])

HSP 1 Score: 64.6994 bits (156), Expect = 1.220e-11
Identity = 42/122 (34.43%), Postives = 70/122 (57.38%), Query Frame = 2

Query:  791 VGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVN-KTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            V  L I  +     + LC +LH++I+ ++EE+YD EVK++  + +I  LT K+ D+KGKF +P LK+V    ++ L  +  N  K S+   R  LKS  +     E+++E     TDWR+++
Sbjct:   51 VPSLQIAGLSLQQLQELCTKLHKQIDSVDEERYDIEVKVKKHDIEIEGLTQKIFDLKGKFKRPNLKRVRISADAMLKALLGNTHKVSVD-LRANLKSVRK-----EDEKEKTVEVTDWRKNI 166

[Close]

BLAST of Troponin i vs. Ensembl Xenopus
Match: thbs1 (thrombospondin 1 [Source:Xenbase;Acc:XB-GENE-486189])

HSP 1 Score: 63.929 bits (154), Expect = 3.118e-11
Identity = 42/122 (34.43%), Postives = 70/122 (57.38%), Query Frame = 2

Query:  791 VGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVN-KTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            V  L I  +     + LC +LH++I+ ++EE+YD EVK++  + +I  LT K+ D+KGKF +P LK+V    ++ L  +  N  K S+   R  LKS  +     E+++E     TDWR+++
Sbjct:   65 VPSLQIAGLSLQQLQELCTKLHKQIDSVDEERYDIEVKVKKHDIEIEGLTQKIFDLKGKFKRPNLKRVRISADAMLKALLGNTHKVSVD-LRANLKSVRK-----EDEKEKTVEVTDWRKNI 180

[Close]

BLAST of Troponin i vs. Ensembl Xenopus
Match: tmem256 (transmembrane protein 256 [Source:Xenbase;Acc:XB-GENE-5915594])

HSP 1 Score: 61.2326 bits (147), Expect = 4.592e-10
Identity = 31/99 (31.31%), Postives = 54/99 (54.55%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNK 1093
            PL +  +  +  + LC++LH RI+ ++EE+YD E K+     +I +L +K+ D++GKF KP L++V  +   + R     + +     R  LK   Q K
Sbjct:  108 PLQLSGLSLSELQDLCRELHARIDVVDEERYDMEAKVNKNISEIEDLNLKIFDLRGKFKKPNLRRVRLSADAMMRALLGTKHKVSMDLRANLKQVKQTK 206

[Close]

BLAST of Troponin i vs. Ensembl Xenopus
Match: ENSXETT00000035132.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:2:77037725:77045127:-1 gene:ENSXETG00000011405.1 transcript:ENSXETT00000035132.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 58.151 bits (139), Expect = 1.240e-9
Identity = 29/93 (31.18%), Postives = 52/93 (55.91%), Query Frame = 2

Query:  803 NIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            N   +   + + LC+ LHE++  ++EE+YD EVK+ +   +I +L +KV D++GKF +P L++V  +   + R     + +     R  LKS 
Sbjct:   53 NYHGLSLAALQELCRDLHEKVGIVDEERYDIEVKVNHNTREIQDLRMKVLDLRGKFKRPALRRVRVSADAMLRALLGSKHKVSMDLRANLKSV 145

[Close]

BLAST of Troponin i vs. Ensembl Xenopus
Match: cyb561 (cytochrome b561 [Source:Xenbase;Acc:XB-GENE-955821])

HSP 1 Score: 53.1434 bits (126), Expect = 1.487e-7
Identity = 25/75 (33.33%), Postives = 48/75 (64.00%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLAR 1021
            PL++ S + +  +  CK++H +I+ ++EE+YD EVK+     ++ +L  K+ D++GKF +P LK+V  +   + R
Sbjct:   57 PLSLPS-NLSELQDFCKKMHAKIDVVDEERYDMEVKVGKSTKELEDLNQKIFDLRGKFKRPALKRVRMSADAMLR 130

[Close]

BLAST of Troponin i vs. Ensembl Mouse
Match: Tnni3 (troponin I, cardiac 3 [Source:MGI Symbol;Acc:MGI:98783])

HSP 1 Score: 69.707 bits (169), Expect = 2.950e-13
Identity = 40/126 (31.75%), Postives = 70/126 (55.56%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVN-KTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            L+T   PL +D +     + LC+QLH R+++++EE+YD E K+     +I +LT K+ D++GKF +P L++V    ++ +  +     K+SL   R  LK   +     E +E G     DWR+++
Sbjct:   77 LRTRCQPLELDGLGFEELQDLCRQLHARVDKVDEERYDVEAKVTKNITEIADLTQKIYDLRGKFKRPTLRRVRISADAMMQALLGTRAKESLD-LRAHLKQVKKEDIEKENREVG-----DWRKNI 196

[Close]

BLAST of Troponin i vs. Ensembl Mouse
Match: Tnni2 (troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070])

HSP 1 Score: 57.3806 bits (137), Expect = 2.832e-9
Identity = 38/127 (29.92%), Postives = 64/127 (50.39%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            N L     PL+I     +  + LCKQLH +I+  EEEKYD EVK++    ++ ++  K+ D++GKF +P L++V  +   + +     + +     R  LK   +      EKE       DWR+++
Sbjct:   33 NYLSEHCPPLHIPG-SMSEVQELCKQLHAKIDVAEEEKYDMEVKVQKSSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLKQVKKED---TEKERDLRDVGDWRKNI 155

[Close]

BLAST of Troponin i vs. Ensembl Mouse
Match: Tnni2 (troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070])

HSP 1 Score: 57.3806 bits (137), Expect = 3.010e-9
Identity = 40/127 (31.50%), Postives = 65/127 (51.18%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            N L     PL+I     +  + LCKQLH +I+  EEEKYD EVK++    ++ ++  K+ D++GKF +P L++V  +   + +     + +     R  LK   Q K    EKE       DWR+++
Sbjct:   43 NYLSEHCPPLHIPG-SMSEVQELCKQLHAKIDVAEEEKYDMEVKVQKSSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLK---QVKKEDTEKERDLRDVGDWRKNI 165

[Close]

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            N L     PL+I     +  + LCKQLH +I+  EEEKYD EVK++    ++ ++  K+ D++GKF +P L++V  +   + +     + +     R  LK   Q K    EKE       DWR+++
Sbjct:   43 NYLSEHCPPLHIPG-SMSEVQELCKQLHAKIDVAEEEKYDMEVKVQKSSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLK---QVKKEDTEKERDLRDVGDWRKNI 165

[Close]

BLAST of Troponin i vs. Ensembl Mouse
Match: Tnni2 (troponin I, skeletal, fast 2 [Source:MGI Symbol;Acc:MGI:105070])

HSP 1 Score: 55.8398 bits (133), Expect = 1.319e-8
Identity = 35/105 (33.33%), Postives = 57/105 (54.29%), Query Frame = 2

Query:  839 LCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            LCKQLH +I+  EEEKYD EVK++    ++ ++  K+ D++GKF +P L++V  +   + +     + +     R  LK   Q K    EKE       DWR+++
Sbjct:   72 LCKQLHAKIDVAEEEKYDMEVKVQKSSKELEDMNQKLFDLRGKFKRPPLRRVRMSADAMLKALLGSKHKVCMDLRANLK---QVKKEDTEKERDLRDVGDWRKNI 173

[Close]

BLAST of Troponin i vs. UniProt/SwissProt
Match: sp|Q7M3Y3|TNNI_CHLNI (Troponin I OS=Chlamys nipponensis akazara OX=6571 PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 3.935e-27
Identity = 61/113 (53.98%), Postives = 80/113 (70.80%), Query Frame = 2

Query:  788 VVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHG 1126
            +V   + D  D  + +ALCK  H+R+  LEE+ YDWE KIR Q+F+INELT+KVND KGKFVKPVL+KVNKTESKL +I + E K+S   FR  LKS+ +++    +KE G G
Sbjct:  182 LVPKFSTDGKDVAALQALCKDFHKRLASLEEDVYDWEAKIRKQDFEINELTLKVNDTKGKFVKPVLRKVNKTESKLDKIQRKEAKKS--DFRDNLKSSREHE---ADKEGGEG 289

[Close]

BLAST of Troponin i vs. UniProt/SwissProt
Match: sp|O44572|TNNI4_CAEEL (Troponin I 4 OS=Caenorhabditis elegans OX=6239 GN=tni-4 PE=2 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.372e-19
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDW 1141
            L+  + PL  D  +E+  +A+  ++ ER+  LE E YD    +R ++F+INELT+ VND++GKFVKP LKKV+KTE K  ++ K E  +    FR QLK   +N+FAL+E++     K  W
Sbjct:   75 LQERIIPLP-DLDNEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTIAVNDLRGKFVKPTLKKVSKTEGKFDKLKKKEATKV--DFRAQLKVVDKNEFALDEEDTEKKEKAAW 192

[Close]

BLAST of Troponin i vs. UniProt/SwissProt
Match: sp|P05547|TNNI_ASTLP (Troponin I OS=Astacus leptodactylus OX=6717 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.282e-17
Identity = 42/103 (40.78%), Postives = 70/103 (67.96%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALE 1105
            P N+D  +E   +A+ K+  +   ++E +KYD E++I  ++++INEL ++VND++GKF+KP LKKV+K E+K A++ K   K +   FR QLK+  + +F LE
Sbjct:   83 PKNLDGANEEQLRAIIKEYFDHTAQIESDKYDVELEIIRKDYEINELNIQVNDLRGKFIKPTLKKVSKYENKFAKLQK---KAAEFNFRNQLKTVKKKEFELE 182

[Close]

BLAST of Troponin i vs. UniProt/SwissProt
Match: sp|P36188|TNNI_DROME (Troponin I OS=Drosophila melanogaster OX=7227 GN=wupA PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 6.622e-14
Identity = 38/94 (40.43%), Postives = 62/94 (65.96%), Query Frame = 2

Query:  794 GPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLK 1075
             P N+    E   + +C++ +ER+   E +K+D E ++R ++++IN+L  +VND++GKFVKP LKKV+K E+K A++ K   K +   FR QLK
Sbjct:  141 SPRNLSDASEGELQEICEEYYERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYENKFAKLQK---KAAEFNFRNQLK 231

[Close]

BLAST of Troponin i vs. UniProt/SwissProt
Match: sp|P48787|TNNI3_MOUSE (Troponin I, cardiac muscle OS=Mus musculus OX=10090 GN=Tnni3 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.064e-12
Identity = 40/126 (31.75%), Postives = 70/126 (55.56%), Query Frame = 2

Query:  779 LKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVN-KTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            L+T   PL +D +     + LC+QLH R+++++EE+YD E K+     +I +LT K+ D++GKF +P L++V    ++ +  +     K+SL   R  LK   +     E +E G     DWR+++
Sbjct:   77 LRTRCQPLELDGLGFEELQDLCRQLHARVDKVDEERYDVEAKVTKNITEIADLTQKIYDLRGKFKRPTLRRVRISADAMMQALLGTRAKESLD-LRAHLKQVKKEDIEKENREVG-----DWRKNI 196

[Close]

BLAST of Troponin i vs. TrEMBL
Match: A0A0X3NY02 (Troponin I OS=Schistocephalus solidus OX=70667 GN=TNNI PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.258e-40
Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLK 1156
            N L++ V PL++D +D+ +     K+L+ER+  LE EKYDWEVKIR Q+F+INELT+KVND+KGKFVKPVLKKV+KTE+ +AR  K E  QSL +FR QLKSTGQNKFALEEK+EG   K +WR+ LK
Sbjct:  106 NYLRSKVQPLSLDGLDDAAVIKKIKELYERMKALEGEKYDWEVKIRRQDFEINELTIKVNDVKGKFVKPVLKKVSKTEN-MARFEKKES-QSLASFRSQLKSTGQNKFALEEKDEG-AHKPEWRDQLK 230

[Close]

BLAST of Troponin i vs. TrEMBL
Match: A0A0X3PN01 (Troponin I OS=Schistocephalus solidus OX=70667 GN=TNNI PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.058e-40
Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLK 1156
            N L++ V PL++D +D+ +     K+L+ER+  LE EKYDWEVKIR Q+F+INELT+KVND+KGKFVKPVLKKV+KTE+ +AR  K E  QSL +FR QLKSTGQNKFALEEK+EG   K +WR+ LK
Sbjct:  111 NYLRSKVQPLSLDGLDDAAVIKKIKELYERMKALEGEKYDWEVKIRRQDFEINELTIKVNDVKGKFVKPVLKKVSKTEN-MARFEKKES-QSLASFRSQLKSTGQNKFALEEKDEG-AHKPEWRDQLK 235

[Close]

BLAST of Troponin i vs. TrEMBL
Match: A0A0X3NPV5 (Uncharacterized protein OS=Schistocephalus solidus OX=70667 GN=TR146010 PE=4 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 8.782e-40
Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLK 1156
            N L++ V PL++D +D+ +     K+L+ER+  LE EKYDWEVKIR Q+F+INELT+KVND+KGKFVKPVLKKV+KTE+ +AR  K E  QSL +FR QLKSTGQNKFALEEK+EG   K +WR+ LK
Sbjct:  119 NYLRSKVQPLSLDGLDDAAVIKKIKELYERMKALEGEKYDWEVKIRRQDFEINELTIKVNDVKGKFVKPVLKKVSKTEN-MARFEKKES-QSLASFRSQLKSTGQNKFALEEKDEG-AHKPEWRDQLK 243

[Close]

BLAST of Troponin i vs. TrEMBL
Match: A0A158R9I4 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS7318 PE=4 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 1.662e-39
Identity = 77/128 (60.16%), Postives = 100/128 (78.12%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLK 1156
            N L++ V PL +D +D+ +     ++LH R+ +LE EKYDWEVK+R Q+ +INELT+KVND+KGKFVKPVLKKV+KTES+LARI K E  ++L +FR QLKSTGQNKFALEEK+E    K D+R+ LK
Sbjct:   67 NYLRSRVQPLQLDGLDDAALAKKVRELHARVAQLEGEKYDWEVKLRRQDIEINELTMKVNDVKGKFVKPVLKKVSKTESQLARIEKKE--KTLASFRTQLKSTGQNKFALEEKDEAQ-HKVDFRDQLK 191

[Close]

BLAST of Troponin i vs. TrEMBL
Match: A0A068X0C0 (Troponin i OS=Echinococcus granulosus OX=6210 GN=EgrG_000734700 PE=4 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.199e-39
Identity = 77/128 (60.16%), Postives = 101/128 (78.91%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLK 1156
            N L++ V PL +D +D+++     ++LH R+ +LE EKYDWEVK+R Q+ +INELT+KVND+KGKFVKPVLKKV+KTES+LARI K E  ++L +FR QLKSTGQNKFALEEK+E    K D+R+ LK
Sbjct:  113 NYLRSRVQPLQLDGLDDSALAKKVRELHARVAQLEGEKYDWEVKLRRQDIEINELTMKVNDVKGKFVKPVLKKVSKTESQLARIEKKE--KTLASFRTQLKSTGQNKFALEEKDEA-SHKVDFRDQLK 237

[Close]

BLAST of Troponin i vs. Ensembl Cavefish
Match: tnni1c (troponin I, skeletal, slow c [Source:ZFIN;Acc:ZDB-GENE-060825-192])

HSP 1 Score: 67.781 bits (164), Expect = 1.257e-12
Identity = 33/95 (34.74%), Postives = 55/95 (57.89%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PL +  +  +  + LCKQLH +++ ++EE+YD+E K+     +I+EL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   80 PLQLSGLAMDELQKLCKQLHAKVDAVDEERYDFEAKVVKNNKEIHELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 174

[Close]

BLAST of Troponin i vs. Ensembl Cavefish
Match: tnni1d (troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-GENE-040718-374])

HSP 1 Score: 66.2402 bits (160), Expect = 2.197e-12
Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            PL +  +     + LC++L+E+I+ ++EE+YD E K+     DI+EL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS  +       K+E  G   DWR+++
Sbjct:   52 PLQLAGLSLADLQNLCRELYEKIDVVDEERYDCENKVIKHNKDIHELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSVKKEDI----KQEKVGEVGDWRKNV 166

[Close]

BLAST of Troponin i vs. Ensembl Cavefish
Match: tnni2a.3 (troponin I type 2a (skeletal, fast), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-040718-80])

HSP 1 Score: 61.6178 bits (148), Expect = 6.601e-11
Identity = 41/107 (38.32%), Postives = 64/107 (59.81%), Query Frame = 2

Query:  839 LCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKL--ARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            LCK+LH  I++++EE+YD E K+   + +I +L +KV D+KGKF KP L+KV  +  ++  A +G ++ K SL   R  LK   +     E KEE      DWR+++
Sbjct:   55 LCKKLHSNIDKVDEERYDLEAKVAKSDKEIEDLKIKVIDLKGKFKKPALRKVRMSADQMLQALLG-SKHKVSLD-LRANLKQVKK-----EVKEEAADV-GDWRKNI 153

[Close]

BLAST of Troponin i vs. Ensembl Cavefish
Match: tnni2b.1 (troponin I, fast skeletal muscle-like [Source:NCBI gene;Acc:103022042])

HSP 1 Score: 61.2326 bits (147), Expect = 1.241e-10
Identity = 27/55 (49.09%), Postives = 41/55 (74.55%), Query Frame = 2

Query:  839 LCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKT 1003
            LCK+LH++I+ ++E++YD E K+     +I+EL +KV D+KGKF KP LKKV  +
Sbjct:   60 LCKKLHQQIDLVDEQRYDMESKVAKSNKEIDELKIKVQDLKGKFKKPALKKVRMS 114

[Close]

BLAST of Troponin i vs. Ensembl Cavefish
Match: tnni1b (troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37])

HSP 1 Score: 60.4622 bits (145), Expect = 1.686e-10
Identity = 37/120 (30.83%), Postives = 70/120 (58.33%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLAR-IGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            PL   S+     + LC++LH +I+ ++EE+YD E K+++   +I +L +KV D++GKF +P L++V  +   + R +  ++ K SL   R  LKS  +     + ++E     +DWR+++
Sbjct:   35 PLQTSSMSFAELQELCRELHAKIDEVDEERYDIEAKVQHNTREIKDLNIKVLDLRGKFKRPNLRRVRVSADAILRSLLGSKHKVSLD-LRANLKSVKKE----DTEKEKSVEVSDWRKNV 149

[Close]

BLAST of Troponin i vs. Ensembl Sea Lamprey
Match: tnni1a (troponin I type 1a (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-030616-266])

HSP 1 Score: 59.3066 bits (142), Expect = 8.092e-11
Identity = 32/118 (27.12%), Postives = 64/118 (54.24%), Query Frame = 2

Query:  791 VGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWR 1144
            V  L +  +     + LC++LH+ I++++EE+YD +V++   + +I EL +K+ D++GKF +P L++V  +   + R       +     R  LKS  ++    +++E+      DWR
Sbjct:   29 VIRLELSHLSSQELQDLCRELHKTIDKVDEERYDMQVRVEKNDKEIKELQMKIYDLRGKFKRPPLRRVRMSADAMLRALLGSRHKVSMDLRANLKSVKKD----DKEEKVRKEVGDWR 142

[Close]

BLAST of Troponin i vs. Ensembl Sea Lamprey
Match: tnni4a (troponin I4a [Source:ZFIN;Acc:ZDB-GENE-041010-75])

HSP 1 Score: 50.0618 bits (118), Expect = 9.591e-8
Identity = 29/103 (28.16%), Postives = 51/103 (49.51%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            N L   V PL +        +      H++++ ++EE+YD E K++  + +I +L  K+ D+KGKF +P LK+V  +   + R     + +     R  LKS 
Sbjct:   50 NVLTERVPPLQLSGFTLQQLQNSAGSCHQKVDVVDEERYDIEYKVKKSQAEITDLNQKIFDLKGKFKRPNLKRVRMSADAMLRALLGSKHKVSMDLRANLKSV 152

[Close]

BLAST of Troponin i vs. Ensembl Medaka
Match: ENSORLT00000027969.1 (troponin I, slow skeletal muscle [Source:NCBI gene;Acc:101167333])

HSP 1 Score: 68.9366 bits (167), Expect = 1.934e-13
Identity = 36/97 (37.11%), Postives = 56/97 (57.73%), Query Frame = 2

Query:  791 VGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            + PL +  +  +  + LCKQLHE+I+ ++EE+YD E K+     DI+EL +KV D+ GKF KP L+KV  +  ++ R     + +     R  LKS 
Sbjct:   51 LPPLQLSGLSLDELQKLCKQLHEKIDVVDEERYDCEHKVVKHNKDIHELKLKVQDLGGKFKKPALRKVRVSADEMMRALLGSKHKGSMDLRANLKSV 147

[Close]

BLAST of Troponin i vs. Ensembl Medaka
Match: tnni1a (troponin I type 1a (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-030616-266])

HSP 1 Score: 62.3882 bits (150), Expect = 3.037e-11
Identity = 31/95 (32.63%), Postives = 55/95 (57.89%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKST 1081
            PLN++ +     +ALC++LH +I+ ++EE+YD E K+     +I +L +KV D++GKF +P L++V  +   + R     + +     R  LKS 
Sbjct:   30 PLNMNGLSLAQLQALCRELHAKIDVVDEERYDIEAKVMLNTREIKDLNIKVLDLRGKFKRPNLRRVRVSADAILRSLLGSKHKVSMDLRANLKSV 124

[Close]

BLAST of Troponin i vs. Ensembl Medaka
Match: tnni1b (troponin I, slow skeletal muscle [Source:NCBI gene;Acc:101156569])

HSP 1 Score: 60.077 bits (144), Expect = 2.628e-10
Identity = 36/123 (29.27%), Postives = 66/123 (53.66%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKT----DWREHL 1153
            P+    +  +  +ALC++LH +I+ ++EE+YD E K+ +   +I +L +KV D++GKF +P L++V  +   + R     + +     R  LKS         +KE+    KT    DWR+++
Sbjct:   35 PVQTSGLSLSELQALCEELHAKIDVVDEERYDIEAKVLHNTREIKDLNIKVQDLRGKFKRPNLRRVRVSADAILRSLLGSKHKVSMDLRANLKSV--------KKEDAEKEKTVEVSDWRKNV 149

[Close]

BLAST of Troponin i vs. Ensembl Medaka
Match: tnni1b (troponin I, slow skeletal muscle [Source:NCBI gene;Acc:101156569])

HSP 1 Score: 59.6918 bits (143), Expect = 3.657e-10
Identity = 36/123 (29.27%), Postives = 66/123 (53.66%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKT----DWREHL 1153
            P+    +  +  +ALC++LH +I+ ++EE+YD E K+ +   +I +L +KV D++GKF +P L++V  +   + R     + +     R  LKS         +KE+    KT    DWR+++
Sbjct:   50 PVQTSGLSLSELQALCEELHAKIDVVDEERYDIEAKVLHNTREIKDLNIKVQDLRGKFKRPNLRRVRVSADAILRSLLGSKHKVSMDLRANLKSV--------KKEDAEKEKTVEVSDWRKNV 164

[Close]

BLAST of Troponin i vs. Ensembl Medaka
Match: tnni4a (troponin I, slow skeletal muscle [Source:NCBI gene;Acc:101172899])

HSP 1 Score: 56.9954 bits (136), Expect = 3.031e-9
Identity = 38/119 (31.93%), Postives = 65/119 (54.62%), Query Frame = 2

Query:  797 PLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHL 1153
            PL +  +     + LCK+LH++I+ ++E +YD EVK+   E +I  L  K+ D+KG   +P LK+V KT   +     +  K     F+  LK+  ++    E++EE     TDWR+++
Sbjct:   51 PLKLSGLSIQELQELCKELHQKIDVVDETRYDIEVKVAKNENEIQSLRQKIVDLKG-IKRPSLKRVKKTTDDMLGAYTDASKLMKADFKANLKTVKKDD---EKREEV----TDWRKNV 161

[Close]

BLAST of Troponin i vs. Planmine SMEST
Match: SMESG000002071.1 (SMESG000002071.1)

HSP 1 Score: 277.33 bits (708), Expect = 1.793e-90
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTXXXXXXXXXXXXQPVEAEA 1216
            NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTSKEGGEDEKEESQPVEAEA
Sbjct:  143 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTSKEGGEDEKEESQPVEAEA 290

HSP 2 Score: 65.855 bits (159), Expect = 9.063e-12
Identity = 37/61 (60.66%), Postives = 37/61 (60.66%), Query Frame = 2

Query:  338 QDGEEGDRTENSEAPRRRRNYEEEDTSNLTNKEDNPDVVVNNYSENADTNDSDRQAAEQDD 520
            QDGEEGDRT                        DNPDVVVNNYSENADTNDSDRQAAEQDD
Sbjct:   22 QDGEEGDRT------------------------DNPDVVVNNYSENADTNDSDRQAAEQDD 58

[Close]

BLAST of Troponin i vs. Planmine SMEST
Match: SMESG000002071.1 (SMESG000002071.1)

HSP 1 Score: 278.1 bits (710), Expect = 2.041e-90
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTXXXXXXXXXXXXQPVEAEA 1216
            NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTSKEGGEDEKEESQPVEAEA
Sbjct:  167 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTSKEGGEDEKEESQPVEAEA 314

HSP 2 Score: 124.405 bits (311), Expect = 7.320e-32
Identity = 60/61 (98.36%), Postives = 61/61 (100.00%), Query Frame = 2

Query:  338 QDGEEGDRTENSEAPRRRRNYEEEDTSNLTNKEDNPDVVVNNYSENADTNDSDRQAAEQDD 520
            QDGEEGDRTENS+APRRRRNYEEEDTSNLTNKEDNPDVVVNNYSENADTNDSDRQAAEQDD
Sbjct:   22 QDGEEGDRTENSDAPRRRRNYEEEDTSNLTNKEDNPDVVVNNYSENADTNDSDRQAAEQDD 82

[Close]

BLAST of Troponin i vs. Planmine SMEST
Match: SMESG000036684.1 (SMESG000036684.1)

HSP 1 Score: 136.346 bits (342), Expect = 3.747e-36
Identity = 71/129 (55.04%), Postives = 96/129 (74.42%), Query Frame = 2

Query:  773 NKLKTVVGPLNIDSVDENSCKALCKQLHERINRLEEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARIGKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKT 1159
            N LKTVV  L +D+        + K+ +E++  LE +KYDWE+K++N +F+INELT+KVN+ KGKFVKPVLK+V+KTE K +++ K +  Q+  +FR QLKSTGQNKFALEEK+E H    DWREHLK+
Sbjct:  170 NYLKTVVPNLELDTSSAEEITKIVKKYYEKLCALESDKYDWEIKLQNLDFEINELTLKVNNAKGKFVKPVLKRVSKTEGKWSKLEK-QRGQNQISFRDQLKSTGQNKFALEEKDETH-KNPDWREHLKS 296

The following BLAST results are available for this feature:

BLAST of Troponin i vs. Ensembl Human
BLAST of Troponin i vs. Ensembl Celegans
BLAST of Troponin i vs. Ensembl Fly
BLAST of Troponin i vs. Ensembl Zebrafish
BLAST of Troponin i vs. Ensembl Xenopus
BLAST of Troponin i vs. Ensembl Mouse
BLAST of Troponin i vs. UniProt/SwissProt
BLAST of Troponin i vs. TrEMBL
BLAST of Troponin i vs. Ensembl Cavefish
BLAST of Troponin i vs. Ensembl Sea Lamprey
BLAST of Troponin i vs. Ensembl Yeast
BLAST of Troponin i vs. Ensembl Nematostella
BLAST of Troponin i vs. Ensembl Medaka
BLAST of Troponin i vs. Planmine SMEST

BLAST of Troponin i vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
TNNI3	1.726e-11	32.28	troponin I3, cardiac type [Source:HGNC Symbol;Acc:...	[more]
TNNI3	6.074e-11	32.28	troponin I3, cardiac type [Source:HGNC Symbol;Acc:...	[more]
TNNI3	3.913e-10	30.43	troponin I3, cardiac type [Source:HGNC Symbol;Acc:...	[more]
TNNI2	7.980e-9	30.71	troponin I2, fast skeletal type [Source:HGNC Symbo...	[more]
TNNI2	7.980e-9	30.71	troponin I2, fast skeletal type [Source:HGNC Symbo...	[more]

BLAST of Troponin i vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
tni-4	2.651e-20	42.15	Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44...	[more]
tni-4	2.651e-20	42.15	Troponin I 4 [Source:UniProtKB/Swiss-Prot;Acc:O44...	[more]
unc-27	1.084e-12	40.40	Troponin I 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9G...	[more]
tni-3	3.473e-12	39.39	Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9X...	[more]
tni-3	3.473e-12	39.39	Troponin I 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9X...	[more]

BLAST of Troponin i vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
wupA	8.726e-19	45.74	gene:FBgn0283471 transcript:FBtr0308237	[more]
wupA	1.256e-18	45.74	gene:FBgn0283471 transcript:FBtr0336897	[more]
wupA	1.256e-18	45.74	gene:FBgn0283471 transcript:FBtr0336896	[more]
wupA	1.256e-18	45.74	gene:FBgn0283471 transcript:FBtr0336895	[more]
wupA	1.260e-18	45.74	gene:FBgn0283471 transcript:FBtr0074520	[more]

BLAST of Troponin i vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
tnni1d	2.039e-13	36.84	troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-...	[more]
tnni1d	2.039e-13	36.84	troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-...	[more]
tnni1d	2.244e-13	36.84	troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-...	[more]
tnni1d	2.244e-13	36.84	troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-...	[more]
tnni1c	2.308e-13	36.84	troponin I, skeletal, slow c [Source:ZFIN;Acc:ZDB-...	[more]

BLAST of Troponin i vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
thbs1	1.220e-11	34.43	thrombospondin 1 [Source:Xenbase;Acc:XB-GENE-48618...	[more]
thbs1	3.118e-11	34.43	thrombospondin 1 [Source:Xenbase;Acc:XB-GENE-48618...	[more]
tmem256	4.592e-10	31.31	transmembrane protein 256 [Source:Xenbase;Acc:XB-G...	[more]
ENSXETT00000035132.1	1.240e-9	31.18	pep primary_assembly:Xenopus_tropicalis_v9.1:2:770...	[more]
cyb561	1.487e-7	33.33	cytochrome b561 [Source:Xenbase;Acc:XB-GENE-955821...	[more]

BLAST of Troponin i vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Tnni3	2.950e-13	31.75	troponin I, cardiac 3 [Source:MGI Symbol;Acc:MGI:9...	[more]
Tnni2	2.832e-9	29.92	troponin I, skeletal, fast 2 [Source:MGI Symbol;Ac...	[more]
Tnni2	3.010e-9	31.50	troponin I, skeletal, fast 2 [Source:MGI Symbol;Ac...	[more]
Tnni2	3.010e-9	31.50	troponin I, skeletal, fast 2 [Source:MGI Symbol;Ac...	[more]
Tnni2	1.319e-8	33.33	troponin I, skeletal, fast 2 [Source:MGI Symbol;Ac...	[more]

BLAST of Troponin i vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q7M3Y3\|TNNI_CHLNI	3.935e-27	53.98	Troponin I OS=Chlamys nipponensis akazara OX=6571 ...	[more]
sp\|O44572\|TNNI4_CAEEL	3.372e-19	42.15	Troponin I 4 OS=Caenorhabditis elegans OX=6239 GN=...	[more]
sp\|P05547\|TNNI_ASTLP	3.282e-17	40.78	Troponin I OS=Astacus leptodactylus OX=6717 PE=1 S...	[more]
sp\|P36188\|TNNI_DROME	6.622e-14	40.43	Troponin I OS=Drosophila melanogaster OX=7227 GN=w...	[more]
sp\|P48787\|TNNI3_MOUSE	2.064e-12	31.75	Troponin I, cardiac muscle OS=Mus musculus OX=1009...	[more]

BLAST of Troponin i vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0X3NY02	5.258e-40	62.50	Troponin I OS=Schistocephalus solidus OX=70667 GN=...	[more]
A0A0X3PN01	7.058e-40	62.50	Troponin I OS=Schistocephalus solidus OX=70667 GN=...	[more]
A0A0X3NPV5	8.782e-40	62.50	Uncharacterized protein OS=Schistocephalus solidus...	[more]
A0A158R9I4	1.662e-39	60.16	Uncharacterized protein OS=Taenia asiatica OX=6051...	[more]
A0A068X0C0	2.199e-39	60.16	Troponin i OS=Echinococcus granulosus OX=6210 GN=E...	[more]

BLAST of Troponin i vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
tnni1c	1.257e-12	34.74	troponin I, skeletal, slow c [Source:ZFIN;Acc:ZDB-...	[more]
tnni1d	2.197e-12	32.77	troponin I, skeletal, slow d [Source:ZFIN;Acc:ZDB-...	[more]
tnni2a.3	6.601e-11	38.32	troponin I type 2a (skeletal, fast), tandem duplic...	[more]
tnni2b.1	1.241e-10	49.09	troponin I, fast skeletal muscle-like [Source:NCBI...	[more]
tnni1b	1.686e-10	30.83	troponin I type 1b (skeletal, slow) [Source:ZFIN;A...	[more]

BLAST of Troponin i vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
tnni1a	8.092e-11	27.12	troponin I type 1a (skeletal, slow) [Source:ZFIN;A...	[more]
tnni4a	9.591e-8	28.16	troponin I4a [Source:ZFIN;Acc:ZDB-GENE-041010-75]	[more]

BLAST of Troponin i vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Troponin i vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Troponin i vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000027969.1	1.934e-13	37.11	troponin I, slow skeletal muscle [Source:NCBI gene...	[more]
tnni1a	3.037e-11	32.63	troponin I type 1a (skeletal, slow) [Source:ZFIN;A...	[more]
tnni1b	2.628e-10	29.27	troponin I, slow skeletal muscle [Source:NCBI gene...	[more]
tnni1b	3.657e-10	29.27	troponin I, slow skeletal muscle [Source:NCBI gene...	[more]
tnni4a	3.031e-9	31.93	troponin I, slow skeletal muscle [Source:NCBI gene...	[more]

BLAST of Troponin i vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000002071.1	1.793e-90	100.00	SMESG000002071.1	[more]
SMESG000002071.1	2.041e-90	100.00	SMESG000002071.1	[more]
SMESG000036684.1	3.747e-36	55.04	SMESG000036684.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30027460 ID=SMED30027460|Name=Troponin i|organism=Schmidtea mediterranea sexual|type=transcript|length=1409bp
AAGGAATCCAGTGCAACTGACAATCCAACCAGCCCGCCAGTCAGCCAGTC
AGCTAGCGACATCCCAACGAGAAGCATCATCATTCTCCCTTGTACCGTCG
ACATGCGTGCTGCACACGACATTTCCCAATGAATATATCTGAAAAAGAAA
ATGTTTGAACTGGCATCGCGCTGCACATATCGCATAAATTTTCGTCAAAT
TGAATCATTTATCCTTTTAAATTTTCGAATCTATTCAGAGTTGTTTTTTT
CGTGTTTCATAATAGTATCTAAAAATGGCCGATGATGAAAGAAGAAAAGA
ACGAGAAGCAAGACGTCGAGCGAGAATGGATAAAATGCAAGATGGCGAAG
AAGGCGACAGAACTGAAAACAGCGAAGCTCCCCGACGCCGGAGAAATTAC
GAGGAAGAAGACACTAGCAATCTCACTAATAAGGAGGACAATCCAGACGT
TGTAGTAAACAACTACTCTGAAAACGCCGACACAAACGACTCTGACAGAC
AAGCGGCAGAACAAGACGATAAACGCAGAAAGGAAGAAGAACGCAGAAAA
GAGGAAATTGCATTGGAAAGACAGAAAAAACTGGAAGAAAAAGCAAAAAG
AGAGAAAAAAGAACAAGAAGAAGCAGCGGCAAAGAAAAAGCGACCCGGCT
CAAAGAAGAAAGGTCTTGGAGGTTTGTCACCGGAGAAGAAAAAACTATTA
AAACAACTGATTATGCAAAAAGCCGCCGAAGAAATGAAAGCCGAAGCTCG
ACGTCGACAGGAGGAGAAAGAAAACAAACTCAAAACTGTTGTTGGTCCTT
TGAATATAGATAGCGTCGATGAAAATAGTTGCAAGGCCCTGTGCAAACAA
TTGCACGAGCGGATCAACAGGCTCGAGGAGGAGAAATACGATTGGGAAGT
CAAAATACGAAACCAGGAATTCGATATAAACGAACTTACGGTCAAGGTCA
ACGACATCAAAGGAAAATTCGTGAAACCTGTTTTGAAAAAAGTAAACAAA
ACAGAAAGCAAGTTGGCACGCATTGGTAAAAATGAAGAAAAACAGTCTCT
GCAAGCTTTCAGAGGACAACTGAAGTCCACGGGACAGAATAAATTTGCCC
TTGAAGAGAAAGAAGAAGGCCATGGAGCTAAAACTGACTGGAGAGAACAC
CTGAAGACCTCGAAAGAAGGCGGAGAAGATGAGAAAGAAGAATCGCAGCC
AGTTGAGGCAGAAGCATAAATGTCAATTTAGAGAATTATTGAGTGAGTTT
GTGTTAAAATGGCAAAACATTCACCAATTATATGTAAATGTGAGTCTATG
CCACTCTTTTTGTCAAAATATGACCTATCCTATAAAGTTTGTTGTTATTA
TTATGCTTTGTGGTCCATGTAGCTCTACGAAATAAAATATTCCTTTAGTT
AAAAAAAAA

protein sequence of SMED30027460-orf-1

>SMED30027460-orf-1 ID=SMED30027460-orf-1|Name=SMED30027460-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=315bp
MADDERRKEREARRRARMDKMQDGEEGDRTENSEAPRRRRNYEEEDTSNL
TNKEDNPDVVVNNYSENADTNDSDRQAAEQDDKRRKEEERRKEEIALERQ
KKLEEKAKREKKEQEEAAAKKKRPGSKKKGLGGLSPEKKKLLKQLIMQKA
AEEMKAEARRRQEEKENKLKTVVGPLNIDSVDENSCKALCKQLHERINRL
EEEKYDWEVKIRNQEFDINELTVKVNDIKGKFVKPVLKKVNKTESKLARI
GKNEEKQSLQAFRGQLKSTGQNKFALEEKEEGHGAKTDWREHLKTSKEGG
EDEKEESQPVEAEA*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000019	muscle progenitor cell
PLANA:0000028	Category 2 cell
PLANA:0000101	muscle cell
PLANA:0000428	musculature system
PLANA:0000478	pharynx musculature

Vocabulary: **INTERPRO**
Term	Definition
IPR038077	Troponin_sf
IPR003618	TFIIS_cen_dom
IPR001978	Troponin

Vocabulary: **biological process**
Term	Definition
GO:0006351	transcription, DNA-templated

Vocabulary: **cellular component**
Term	Definition
GO:0005861	troponin complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 146..171
None	No IPR available	COILS	Coil	Coil	coord: 183..210
None	No IPR available	COILS	Coil	Coil	coord: 78..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..52
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..272
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..304
None	No IPR available	PANTHER	PTHR13738	TROPONIN I	coord: 6..307
None	No IPR available	PANTHER	PTHR13738:SF1	TROPONIN I	coord: 6..307
IPR038077	Troponin domain superfamily	GENE3D	G3DSA:1.20.5.350		coord: 123..289 e-value: 1.8E-45 score: 156.5
IPR038077	Troponin domain superfamily	SUPERFAMILY	SSF90250	Troponin coil-coiled subunits	coord: 134..280
IPR001978	Troponin	PFAM	PF00992	Troponin	coord: 139..268 e-value: 2.4E-35 score: 121.8
IPR003618	Transcription elongation factor S-II, central domain	PROSITE	PS51321	TFIIS_CENTRAL	coord: 1..29 score: 8.703

Main menu

Troponin i

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 22

Owlery

blazegraph-runner