Small ArfGAP 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30026569 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of Small ArfGAP 1 vs. Ensembl Human
Match: SMAP1 (small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]) HSP 1 Score: 164.081 bits (414), Expect = 5.850e-45 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H LIL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ +YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Human
Match: SMAP1 (small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]) HSP 1 Score: 163.31 bits (412), Expect = 6.063e-45 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H LIL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ +YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Human
Match: SMAP2 (small ArfGAP2 [Source:HGNC Symbol;Acc:HGNC:25082]) HSP 1 Score: 162.155 bits (409), Expect = 1.456e-44 Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 +++ +L ++ +E NK CADC ++G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP F RPQ + A+E FIR KY+ K+Y Sbjct: 9 VDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. Ensembl Human
Match: SMAP1 (small ArfGAP 1 [Source:HGNC Symbol;Acc:HGNC:19651]) HSP 1 Score: 162.155 bits (409), Expect = 1.706e-44 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H LIL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ +YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Human
Match: SMAP2 (small ArfGAP2 [Source:HGNC Symbol;Acc:HGNC:25082]) HSP 1 Score: 138.658 bits (348), Expect = 1.612e-38 Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 1 Query: 202 GTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP F RPQ + A+E FIR KY+ K+Y Sbjct: 19 GPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY 107
BLAST of Small ArfGAP 1 vs. Ensembl Celegans
Match: W09D10.1 (pep chromosome:WBcel235:III:10736919:10739786:-1 gene:WBGene00012359.1 transcript:W09D10.1.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:W09D10.1) HSP 1 Score: 163.696 bits (413), Expect = 4.858e-45 Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 142 ILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCI 474 LL ++++E NK CADC + RWA+WN G+F+CIRCAGIHRNLGVHISKV+SV+LDSWT EQ+Q M +MGN K+ ++YE LP F RP + +E+FIRSKY+ KRY + Sbjct: 19 FLLDMLKEEENKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISKVRSVNLDSWTPEQVQTMRVMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKYEQKRYIL 129
BLAST of Small ArfGAP 1 vs. Ensembl Celegans
Match: W09D10.1 (pep chromosome:WBcel235:III:10736919:10739792:-1 gene:WBGene00012359.1 transcript:W09D10.1.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:W09D10.1) HSP 1 Score: 163.696 bits (413), Expect = 4.858e-45 Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 142 ILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCI 474 LL ++++E NK CADC + RWA+WN G+F+CIRCAGIHRNLGVHISKV+SV+LDSWT EQ+Q M +MGN K+ ++YE LP F RP + +E+FIRSKY+ KRY + Sbjct: 19 FLLDMLKEEENKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISKVRSVNLDSWTPEQVQTMRVMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKYEQKRYIL 129
BLAST of Small ArfGAP 1 vs. Ensembl Celegans
Match: W09D10.1 (pep chromosome:WBcel235:III:10736893:10739824:-1 gene:WBGene00012359.1 transcript:W09D10.1.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:W09D10.1) HSP 1 Score: 163.696 bits (413), Expect = 4.858e-45 Identity = 66/111 (59.46%), Postives = 86/111 (77.48%), Query Frame = 1 Query: 142 ILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCI 474 LL ++++E NK CADC + RWA+WN G+F+CIRCAGIHRNLGVHISKV+SV+LDSWT EQ+Q M +MGN K+ ++YE LP F RP + +E+FIRSKY+ KRY + Sbjct: 19 FLLDMLKEEENKYCADCQAKTPRWAAWNLGVFICIRCAGIHRNLGVHISKVRSVNLDSWTPEQVQTMRVMGNEKARQVYEHDLPAQFRRPTNDQQMEQFIRSKYEQKRYIL 129
BLAST of Small ArfGAP 1 vs. Ensembl Celegans
Match: cnt-2 (Arf-GAP with ANK repeat and PH domain-containing protein cnt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XX14]) HSP 1 Score: 105.531 bits (262), Expect = 4.474e-24 Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEE---FIRSKYQYKRYCISPPKSDSSPTT 507 GN CADCG + WAS N GI +CI C+GIHRNLG HISKV+ ++LD W E L VM+ +GN K++E++E L +P + EE FI KY K + P + P T Sbjct: 392 GNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREEKERFIDRKYVQKAFL--KPIASGEPVT 505
BLAST of Small ArfGAP 1 vs. Ensembl Celegans
Match: cnt-2 (Arf-GAP with ANK repeat and PH domain-containing protein cnt-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9XX14]) HSP 1 Score: 105.145 bits (261), Expect = 6.794e-24 Identity = 55/130 (42.31%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 127 NKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEE---FIRSKYQYKRYCISPPKSDSSPTT 507 N+ + L+ I GN CADCG + WAS N GI +CI C+GIHRNLG HISKV+ ++LD W E L VM+ +GN K++E++E L +P + EE FI KY K + P + P T Sbjct: 456 NRPDIAALRSIP--GNGRCADCGNPSSEWASINLGIIICIECSGIHRNLGSHISKVRGLELDQWPVEHLAVMQAIGNDKANEMWEFGLLNGERKPTPESSREEKERFIDRKYVQKAFL--KPIASGEPVT 581
BLAST of Small ArfGAP 1 vs. Ensembl Fly
Match: CG8243 (gene:FBgn0033349 transcript:FBtr0088652) HSP 1 Score: 164.851 bits (416), Expect = 2.911e-45 Identity = 71/127 (55.91%), Postives = 92/127 (72.44%), Query Frame = 1 Query: 130 KSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCI------SPPKSD 492 K +L +++ E NK C DC +G RWASWN G+FLCIRCAGIHRNLGVHIS+VKSV+LD+WT EQ+ ++ MGN ++ +YEA LP F RPQT+ A+E FIR+KY++K+Y SPPK D Sbjct: 16 KCQTLLTQMLRDEDNKYCVDCDAKGPRWASWNLGMFLCIRCAGIHRNLGVHISRVKSVNLDTWTPEQVISLQQMGNSRARAVYEAQLPDGFRRPQTDTALENFIRAKYEHKKYLAREWVPPSPPKVD 142
BLAST of Small ArfGAP 1 vs. Ensembl Fly
Match: CenB1A (gene:FBgn0039056 transcript:FBtr0084369) HSP 1 Score: 100.908 bits (250), Expect = 1.457e-22 Identity = 56/144 (38.89%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGN--FTRPQTNYAI---EEFIRSKYQYKRYCISPPKS--------------DSSPTTEDNDKCKSNIAK 543 GN C DC + RWAS N GI LCI C+G+HR+LGVH SKV+S+ LD+W E ++VM +GN + IYEA + + +P I E +I++KY +R+ PK DS ED + S IAK Sbjct: 162 GNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVCGMPKPQELLASETAEVLSIDSGGVVEDGESGGSGIAK 305
BLAST of Small ArfGAP 1 vs. Ensembl Fly
Match: CenB1A (gene:FBgn0039056 transcript:FBtr0084368) HSP 1 Score: 100.908 bits (250), Expect = 1.779e-22 Identity = 56/144 (38.89%), Postives = 76/144 (52.78%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGN--FTRPQTNYAI---EEFIRSKYQYKRYCISPPKS--------------DSSPTTEDNDKCKSNIAK 543 GN C DC + RWAS N GI LCI C+G+HR+LGVH SKV+S+ LD+W E ++VM +GN + IYEA + + +P I E +I++KY +R+ PK DS ED + S IAK Sbjct: 392 GNAYCCDCRSPEPRWASINLGITLCIECSGVHRSLGVHYSKVRSLTLDAWESENVKVMMELGNEVVNRIYEARIGDDCGLKKPTEQCEIGVREAWIKAKYVERRFVCGMPKPQELLASETAEVLSIDSGGVVEDGESGGSGIAK 535
BLAST of Small ArfGAP 1 vs. Ensembl Fly
Match: CenG1A (gene:FBgn0028509 transcript:FBtr0080548) HSP 1 Score: 94.3597 bits (233), Expect = 2.604e-20 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEE---FIRSKYQYKRY 468 GN C DCG WAS N G+ +CI C+G+HRNLG HISKV+S+ LD W L VM +GN ++ ++E+ +P + + E+ ++RSKY+ K + Sbjct: 481 GNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDDWPSPHLSVMLAIGNSLANSVWESNT-RQRVKPTSQASREDKERWVRSKYEAKEF 582
BLAST of Small ArfGAP 1 vs. Ensembl Fly
Match: CenG1A (gene:FBgn0028509 transcript:FBtr0080546) HSP 1 Score: 93.9745 bits (232), Expect = 3.772e-20 Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEE---FIRSKYQYKRY 468 GN C DCG WAS N G+ +CI C+G+HRNLG HISKV+S+ LD W L VM +GN ++ ++E+ +P + + E+ ++RSKY+ K + Sbjct: 713 GNGFCVDCGAPNPEWASLNLGVLMCIECSGVHRNLGSHISKVRSLGLDDWPSPHLSVMLAIGNSLANSVWESNT-RQRVKPTSQASREDKERWVRSKYEAKEF 814
BLAST of Small ArfGAP 1 vs. Ensembl Zebrafish
Match: smap1 (small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]) HSP 1 Score: 168.703 bits (426), Expect = 8.451e-47 Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K+N+ H IL K++ ++ NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ ++YEA LP NF RPQT+ A+E FIR KY+ K+Y Sbjct: 12 KLNEQHQAILSKMLREDDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPENFRRPQTDQAVEFFIRDKYERKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Zebrafish
Match: smap1 (small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]) HSP 1 Score: 167.933 bits (424), Expect = 1.181e-46 Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K+N+ H IL K++ ++ NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ ++YEA LP NF RPQT+ A+E FIR KY+ K+Y Sbjct: 12 KLNEQHQAILSKMLREDDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPENFRRPQTDQAVEFFIRDKYERKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Zebrafish
Match: smap2 (small ArfGAP2 [Source:ZFIN;Acc:ZDB-GENE-060503-374]) HSP 1 Score: 147.902 bits (372), Expect = 1.623e-39 Identity = 64/107 (59.81%), Postives = 80/107 (74.77%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 I++ +L ++ E NK CADC +G RWASWN GIF+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ +YEA LP F RP+T+ A E FIR Sbjct: 9 IDRYQAVLTSLLTLEENKFCADCYAKGPRWASWNLGIFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQSVQEMGNAKARRLYEAFLPECFQRPETDQAAEIFIR 115
BLAST of Small ArfGAP 1 vs. Ensembl Zebrafish
Match: zgc:162872 (zgc:162872 [Source:ZFIN;Acc:ZDB-GENE-081022-1]) HSP 1 Score: 105.145 bits (261), Expect = 8.437e-24 Identity = 51/115 (44.35%), Postives = 72/115 (62.61%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAI---EEFIRSKYQYKRYC---ISPPKSDS 495 GN++C DCG RWAS N GI +CI C+GIHR+LGVH+SKV+S+ LDSW EQL+++ ++GN + IYE +P E++IRSKY KR+ + P +D+ Sbjct: 399 GNQHCCDCGEAEPRWASVNLGITMCIECSGIHRSLGVHLSKVRSLTLDSWEPEQLKLLCVLGNEVINGIYEREAADGLQKPSAGSPRQDKEQWIRSKYVEKRFVARHLDGPDADA 513
BLAST of Small ArfGAP 1 vs. Ensembl Zebrafish
Match: si:ch211-168b3.1 (si:ch211-168b3.1 [Source:ZFIN;Acc:ZDB-GENE-081104-34]) HSP 1 Score: 105.145 bits (261), Expect = 9.286e-24 Identity = 56/128 (43.75%), Postives = 77/128 (60.16%), Query Frame = 1 Query: 121 KINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGN-FTRPQ---TNYAIEEFIRSKYQYKRYCISPPKSD 492 K+ K L +++ GN+ C DCG RWAS N I LCI C+GIHR+LGVH SKV+S+ LD+W E L++M +GN ++IYEA N +PQ IE FIR+KY KR+ + P + + Sbjct: 397 KLVKGESALQRVLAIPGNEFCCDCGQSDPRWASINLCITLCIECSGIHRSLGVHNSKVRSLTLDTWEPELLKLMCELGNDVINQIYEAHREENGGKKPQPGDPRREIEAFIRAKYVDKRFVLKPTEQE 524
BLAST of Small ArfGAP 1 vs. Ensembl Xenopus
Match: ammecr1l (AMMECR1 like [Source:Xenbase;Acc:XB-GENE-5787907]) HSP 1 Score: 167.162 bits (422), Expect = 2.125e-47 Identity = 72/117 (61.54%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K N+ H IL +++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ ++YEA LP NF RPQT+ ++E FIR KY+ K+Y Sbjct: 12 KQNEQHQAILSRMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQMQCMQDMGNTKARQMYEANLPENFRRPQTDQSVEFFIRDKYERKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Xenopus
Match: ammecr1l (AMMECR1 like [Source:Xenbase;Acc:XB-GENE-5787907]) HSP 1 Score: 167.162 bits (422), Expect = 1.520e-46 Identity = 72/117 (61.54%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K N+ H IL +++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ ++YEA LP NF RPQT+ ++E FIR KY+ K+Y Sbjct: 12 KQNEQHQAILSRMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQMQCMQDMGNTKARQMYEANLPENFRRPQTDQSVEFFIRDKYERKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Xenopus
Match: ammecr1l (AMMECR1 like [Source:Xenbase;Acc:XB-GENE-5787907]) HSP 1 Score: 167.933 bits (424), Expect = 1.943e-46 Identity = 72/117 (61.54%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K N+ H IL +++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ ++YEA LP NF RPQT+ ++E FIR KY+ K+Y Sbjct: 12 KQNEQHQAILSRMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQMQCMQDMGNTKARQMYEANLPENFRRPQTDQSVEFFIRDKYERKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Xenopus
Match: ammecr1l (AMMECR1 like [Source:Xenbase;Acc:XB-GENE-5787907]) HSP 1 Score: 167.162 bits (422), Expect = 2.806e-46 Identity = 72/117 (61.54%), Postives = 92/117 (78.63%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K N+ H IL +++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ ++YEA LP NF RPQT+ ++E FIR KY+ K+Y Sbjct: 12 KQNEQHQAILSRMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQMQCMQDMGNTKARQMYEANLPENFRRPQTDQSVEFFIRDKYERKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Xenopus
Match: foxn3 (forkhead box N3 [Source:Xenbase;Acc:XB-GENE-483117]) HSP 1 Score: 165.236 bits (417), Expect = 4.174e-46 Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 1 Query: 112 MTSK----INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 MT K + + +L +++ +E NK CADC +G RWASWN G+F+CIRCAG+HRNLGVHIS+VKSV+LD WT EQ+Q ME MGN K+ +YEA LP NF RPQT+ A+E FIR KY+ K+Y Sbjct: 1 MTGKSVRDVERYQAVLSELLLREENKFCADCLAKGPRWASWNIGVFVCIRCAGVHRNLGVHISRVKSVNLDQWTQEQIQCMEEMGNGKAKRLYEAFLPDNFIRPQTDQAVEVFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. Ensembl Mouse
Match: Smap2 (small ArfGAP 2 [Source:MGI Symbol;Acc:MGI:1917030]) HSP 1 Score: 162.155 bits (409), Expect = 1.000e-44 Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 +++ +L ++ +E NK CADC ++G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP F RPQ + A+E FIR KY+ K+Y Sbjct: 9 VDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. Ensembl Mouse
Match: Smap1 (small ArfGAP 1 [Source:MGI Symbol;Acc:MGI:2138261]) HSP 1 Score: 162.155 bits (409), Expect = 1.403e-44 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H LIL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ +YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Mouse
Match: Acap3 (ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [Source:MGI Symbol;Acc:MGI:2153589]) HSP 1 Score: 103.605 bits (257), Expect = 3.716e-23 Identity = 65/190 (34.21%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 130 KSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAI----EEFIRSKYQYKRY--------------------CISPPKSDSSPTTEDNDKCK---SNIAKLKKPASVESESDKTSTPMQESDDSL 618 K +L ++ GN C DCG RWAS N G+ LCI C+GIHR+LGVH SKV+S+ LDSW E L++M +GN ++IYEA G R T + E +I+ KY K++ C P S +PTT + + ++A L A++E + + S + DSL Sbjct: 401 KGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSTVNQIYEAQCEGPGVRKPTASSSRQDKEAWIKDKYVEKKFLRKLTSAPAREPPRRWRAQKCQRPHSSPHAPTTRRKVRLEPVLPSVAALSSAATMERKFRRDSLFCPDELDSL 590
BLAST of Small ArfGAP 1 vs. Ensembl Mouse
Match: Agap3 (ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 [Source:MGI Symbol;Acc:MGI:2183446]) HSP 1 Score: 102.064 bits (253), Expect = 4.122e-23 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEE---FIRSKYQYKRYCISPPKSD 492 GN C DC WAS N G +CI C+GIHR+LG H+S+V+S+DLD W E L VM MGN ++ ++E AL G +++P EE +IR+KY+ K + P SD Sbjct: 207 GNSLCIDCEAPNPDWASLNLGALMCIECSGIHRHLGAHLSRVRSLDLDDWPPELLAVMTAMGNALANSVWEGALDG-YSKPGPEACREEKERWIRAKYEQKLFLAPLPSSD 316
BLAST of Small ArfGAP 1 vs. Ensembl Mouse
Match: Acap3 (ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 [Source:MGI Symbol;Acc:MGI:2153589]) HSP 1 Score: 103.219 bits (256), Expect = 4.406e-23 Identity = 65/190 (34.21%), Postives = 93/190 (48.95%), Query Frame = 1 Query: 130 KSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAI----EEFIRSKYQYKRY--------------------CISPPKSDSSPTTEDNDKCK---SNIAKLKKPASVESESDKTSTPMQESDDSL 618 K +L ++ GN C DCG RWAS N G+ LCI C+GIHR+LGVH SKV+S+ LDSW E L++M +GN ++IYEA G R T + E +I+ KY K++ C P S +PTT + + ++A L A++E + + S + DSL Sbjct: 397 KGESVLQRVQSVAGNSQCGDCGQPDPRWASINLGVLLCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNSTVNQIYEAQCEGPGVRKPTASSSRQDKEAWIKDKYVEKKFLRKLTSAPAREPPRRWRAQKCQRPHSSPHAPTTRRKVRLEPVLPSVAALSSAATMERKFRRDSLFCPDELDSL 586
BLAST of Small ArfGAP 1 vs. UniProt/SwissProt
Match: sp|Q5F413|SMAP2_CHICK (Stromal membrane-associated protein 2 OS=Gallus gallus OX=9031 GN=SMAP2 PE=2 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 4.010e-45 Identity = 69/115 (60.00%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 + + +L ++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP NF RPQT+ A+E FIR KY+ K+Y Sbjct: 9 VERYQAVLGSLLSEEENKYCADCQAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAFLPENFRRPQTDQAVEGFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. UniProt/SwissProt
Match: sp|Q5EA00|SMAP2_BOVIN (Stromal membrane-associated protein 2 OS=Bos taurus OX=9913 GN=SMAP2 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 1.755e-44 Identity = 67/115 (58.26%), Postives = 90/115 (78.26%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 +++ +L ++ +E NK CADC ++G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP F RPQ ++A+E FIR KY+ K+Y Sbjct: 9 VDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDHAVEGFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. UniProt/SwissProt
Match: sp|Q8IYB5|SMAP1_HUMAN (Stromal membrane-associated protein 1 OS=Homo sapiens OX=9606 GN=SMAP1 PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 2.810e-44 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H LIL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K+ +YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQLILSKLLREEDNKYCADCEAKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTAEQIQCMQDMGNTKARLLYEANLPENFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. UniProt/SwissProt
Match: sp|Q8WU79|SMAP2_HUMAN (Stromal membrane-associated protein 2 OS=Homo sapiens OX=9606 GN=SMAP2 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 6.992e-44 Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 +++ +L ++ +E NK CADC ++G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP F RPQ + A+E FIR KY+ K+Y Sbjct: 9 VDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. UniProt/SwissProt
Match: sp|Q7TN29|SMAP2_MOUSE (Stromal membrane-associated protein 2 OS=Mus musculus OX=10090 GN=Smap2 PE=1 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 6.998e-44 Identity = 67/115 (58.26%), Postives = 89/115 (77.39%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 +++ +L ++ +E NK CADC ++G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M+ MGN K++ +YEA LP F RPQ + A+E FIR KY+ K+Y Sbjct: 9 VDRYQAVLANLLLEEDNKFCADCQSKGPRWASWNIGVFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQIQCMQEMGNGKANRLYEAYLPETFRRPQIDPAVEGFIRDKYEKKKY 123
BLAST of Small ArfGAP 1 vs. TrEMBL
Match: A0A0N4UC26 (Arf-GAP domain-containing protein OS=Dracunculus medinensis OX=318479 GN=DME_LOCUS8678 PE=4 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 8.984e-47 Identity = 67/115 (58.26%), Postives = 95/115 (82.61%), Query Frame = 1 Query: 130 KSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCI 474 + H ++++++ ++ NK CADC + RWASWN G+FLCIRCAGIHRNLGVH++K+KSV+LDSWT EQ+Q M +MGN+++ ++YEA LP +F RPQT+ A+E FIR+KY++KRY I Sbjct: 16 RLHALVVELLREDENKYCADCEAKQPRWASWNLGVFLCIRCAGIHRNLGVHLTKIKSVNLDSWTAEQVQSMRVMGNKRAKQVYEAELPEHFRRPQTDQALESFIRAKYEHKRYII 130
BLAST of Small ArfGAP 1 vs. TrEMBL
Match: A0A3P9HI60 (Small ArfGAP 1 OS=Oryzias latipes OX=8090 GN=SMAP1 (1 of many) PE=4 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 1.302e-46 Identity = 81/163 (49.69%), Postives = 110/163 (67.48%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY------CISPPKSDSSPTTE-----------DNDKCKSNIAKLKKP 555 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M MGN ++ +YEA LP NF RPQT+ A+E FIR KY+ K+Y +P S++ P++ ++ +C+SN K+ +P Sbjct: 12 KLNEEHQTILSKLLREEDNKYCADCEAKGPRWASWNLGVFMCIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSMVDMGNTRAKHLYEAHLPENFRRPQTDQAVEVFIRDKYERKKYYNKEAAAAAPKTSEAVPSSTLLSSQADRSRPEHSECRSNAGKITEP 174
BLAST of Small ArfGAP 1 vs. TrEMBL
Match: A0A484CBC3 (Arf-GAP domain-containing protein OS=Perca flavescens OX=8167 GN=EPR50_G00174780 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.345e-46 Identity = 79/130 (60.77%), Postives = 98/130 (75.38%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYC------ISPPKS 489 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M MGN ++ E+YEA LP NF RPQT+ A+E FIR KY+ K+YC +PPKS Sbjct: 12 KLNEQHQAILSKLLREEHNKFCADCEAKGPRWASWNLGVFMCIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSMVDMGNSRAKELYEAYLPENFRRPQTDQAVEVFIRDKYERKKYCNKEALTAAPPKS 141
BLAST of Small ArfGAP 1 vs. TrEMBL
Match: Q5C6R3 (SJCHGC04830 protein (Fragment) OS=Schistosoma japonicum OX=6182 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 1.435e-46 Identity = 81/150 (54.00%), Postives = 101/150 (67.33%), Query Frame = 1 Query: 130 KSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDKCKSNIAKL-----KKPASV 564 + LI+ +++ E NK CADC +G RWASWN GIFLCIRCAGIHRNLGVHISKVKSV+LD+WT QL VM MGN ++ +YEA LP NF RPQT+ A+E FIR+KY+ KRY + +P D + + +L KKP SV Sbjct: 12 RHQLIIQELLRDEDNKYCADCDAKGPRWASWNIGIFLCIRCAGIHRNLGVHISKVKSVNLDTWTPMQLAVMREMGNSRARAVYEANLPDNFRRPQTDSALETFIRAKYEQKRYIA----QEYTPIKPDVESLMKELQRLELSLKKKPTSV 157
BLAST of Small ArfGAP 1 vs. TrEMBL
Match: A0A183KPD7 (Arf-GAP domain-containing protein OS=Schistosoma curassoni OX=6186 GN=SCUD_LOCUS16918 PE=4 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 1.609e-46 Identity = 76/127 (59.84%), Postives = 94/127 (74.02%), Query Frame = 1 Query: 130 KSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTE 510 + LI+ +++ + NK CADC +G RWASWN GIFLCIRCAGIHRNLGVHISKVKSV+LD+WT QL VM MGN ++ +YEA LP NF RPQT+ A+E FIR+KY+ KRY I+ + S P E Sbjct: 17 RHQLIIQELLRDDDNKYCADCDAKGPRWASWNIGIFLCIRCAGIHRNLGVHISKVKSVNLDTWTPMQLAVMREMGNSRARAVYEANLPDNFRRPQTDAALETFIRAKYEQKRY-IAQEYTPSKPDVE 142
BLAST of Small ArfGAP 1 vs. Ensembl Cavefish
Match: smap1 (small ArfGAP 1 [Source:NCBI gene;Acc:103038877]) HSP 1 Score: 160.229 bits (404), Expect = 7.251e-44 Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ ++YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQAILSKMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPDNFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Cavefish
Match: smap1 (small ArfGAP 1 [Source:NCBI gene;Acc:103038877]) HSP 1 Score: 160.229 bits (404), Expect = 8.555e-44 Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ ++YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQAILSKMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPDNFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Cavefish
Match: smap1 (small ArfGAP 1 [Source:NCBI gene;Acc:103038877]) HSP 1 Score: 160.999 bits (406), Expect = 8.609e-44 Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ ++YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQAILSKMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPDNFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Cavefish
Match: smap1 (small ArfGAP 1 [Source:NCBI gene;Acc:103038877]) HSP 1 Score: 160.614 bits (405), Expect = 9.374e-44 Identity = 69/109 (63.30%), Postives = 87/109 (79.82%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ ++YEA LP NF RPQT+ A+E FIR Sbjct: 12 KLNEQHQAILSKMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSVQSMGNTKARQLYEAHLPDNFRRPQTDQAVEFFIR 120
BLAST of Small ArfGAP 1 vs. Ensembl Cavefish
Match: smap2 (small ArfGAP2 [Source:ZFIN;Acc:ZDB-GENE-060503-374]) HSP 1 Score: 108.612 bits (270), Expect = 1.186e-25 Identity = 54/120 (45.00%), Postives = 72/120 (60.00%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY---CI 474 +++ +L ++ E NK CADC R GIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ +YEA LP F RP+T+ + E FIR KY+ K+Y CI Sbjct: 9 VDRYQAVLTSLLALEENKFCADC------------------RAKGIHRNLGVHISRVKSVNLDQWTQEQIQCVQEMGNAKARRLYEAFLPECFQRPETDQSAELFIRDKYEKKKYIDKCI 110
BLAST of Small ArfGAP 1 vs. Ensembl Sea Lamprey
Match: smap1 (small ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-060920-2]) HSP 1 Score: 164.851 bits (416), Expect = 4.390e-46 Identity = 70/117 (59.83%), Postives = 93/117 (79.49%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K N+ H +L+ ++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGNRK+ +YEA LP +F RPQ+++A+E FIR KY+ K+Y Sbjct: 12 KQNEQHQALLVAMLREEDNKYCADCEAKGPRWASWNLGVFVCIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQNIQEMGNRKARRLYEANLPDSFRRPQSDHAVEIFIREKYEKKKY 128
BLAST of Small ArfGAP 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000548.1 (pep scaffold:Pmarinus_7.0:GL476772:99521:119783:-1 gene:ENSPMAG00000000494.1 transcript:ENSPMAT00000000548.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 132.88 bits (333), Expect = 4.257e-38 Identity = 62/107 (57.94%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 202 GTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDK 522 G RWASWN G+F+CIRCAGIHRNLGVHI++VKSV+LD WT EQ+Q M+ MGN K+ ++YE LP +F RP ++ A E FIR KY KRY + SSP ++ DK Sbjct: 1 GPRWASWNLGVFICIRCAGIHRNLGVHIARVKSVNLDQWTSEQIQHMQDMGNGKAKKLYEGFLPKDFRRPVSDQAAEAFIRDKYDKKRY-MDRDADISSPKDKEKDK 106
BLAST of Small ArfGAP 1 vs. Ensembl Sea Lamprey
Match: acap3b (ArfGAP with coiled-coil, ankyrin repeat and PH domains 3b [Source:ZFIN;Acc:ZDB-GENE-070209-274]) HSP 1 Score: 99.7525 bits (247), Expect = 3.396e-23 Identity = 50/113 (44.25%), Postives = 73/113 (64.60%), Query Frame = 1 Query: 142 ILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAA---LPGNFTRPQTNYAIEE-FIRSKYQYKRY 468 +L ++ GN+ C DCG RWAS N GI LCI C+GIHR+LGVH SKV+S+ LDSW E L++M +GN ++IYEA+ + G P ++ +E +IR+KY +++ Sbjct: 69 VLARVQAIRGNERCCDCGQPDPRWASINLGIALCIECSGIHRSLGVHCSKVRSLTLDSWEPELLKLMCELGNHVINDIYEASADDVGGKKPTPSSSRQEKEMWIRAKYVDRKF 181
BLAST of Small ArfGAP 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000009914.1 (pep scaffold:Pmarinus_7.0:GL476634:533628:626389:1 gene:ENSPMAG00000008958.1 transcript:ENSPMAT00000009914.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 93.2041 bits (230), Expect = 1.115e-20 Identity = 40/82 (48.78%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 154 IIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGN 399 I + +GN C DCG WAS N G +CI C+GIHRNLG H+S+V+S+DLD W E QVM +GN S ++E +L G+ Sbjct: 538 IRDVQGNDVCIDCGAPNPDWASLNLGALICIECSGIHRNLGSHVSRVRSLDLDEWPDELAQVMVSVGNAMSRGVWEGSLAGH 619
BLAST of Small ArfGAP 1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006444.1 (pep scaffold:Pmarinus_7.0:GL477103:5377:54062:-1 gene:ENSPMAG00000005792.1 transcript:ENSPMAT00000006444.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 86.6557 bits (213), Expect = 1.909e-18 Identity = 38/83 (45.78%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 166 EGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQ 414 GN C DC WAS N G +CI C+GIHRNLG H+S+V+S+DLD W E VM +GN ++ ++EA G +PQ Sbjct: 572 RGNAFCVDCDAPSPDWASLNLGALMCIECSGIHRNLGTHLSRVRSLDLDDWPLELAAVMLAIGNATANGVWEADTQG-LGKPQ 653
BLAST of Small ArfGAP 1 vs. Ensembl Yeast
Match: AGE2 (ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in Trans-Golgi-Network (TGN) transport; contains C2C2H2 cysteine/histidine motif [Source:SGD;Acc:S000001306]) HSP 1 Score: 110.923 bits (276), Expect = 4.177e-28 Identity = 49/112 (43.75%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 145 LLKIIEKEGNKNCADCGTE-GTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQL-QVMELMGNRKSHEIYEAALPGNFTRPQT--NYAIEEFIRSKYQYKRY 468 L ++ GN +CADC + RWASW+ G+F+CI+CAGIHR+LG HISKVKSVDLD+W E L ++++ N +++ YEA L + + +++ FI++KY+YK++ Sbjct: 11 LSALLRDPGNSHCADCKAQLHPRWASWSLGVFICIKCAGIHRSLGTHISKVKSVDLDTWKEEHLVKLIQFKNNLRANSYYEATLADELKQRKITDTSSLQNFIKNKYEYKKW 122
BLAST of Small ArfGAP 1 vs. Ensembl Yeast
Match: GCS1 (ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; required for prospore membrane formation; regulates phospholipase Spo14p; shares functional similarity with Glo3p; GCS1 has a paralog, SPS18, that arose from the whole genome duplication [Source:SGD;Acc:S000002385]) HSP 1 Score: 82.4185 bits (202), Expect = 8.080e-18 Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = 1 Query: 145 LLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNR------KSHEIYEAALP 393 LL++ + NK C DCG +WA+ FG F+C+ CAGIHR LGVHIS V+S+ +D + E+L ME GN KSH I + +LP Sbjct: 14 LLQLQKIGANKKCMDCGAPNPQWATPKFGAFICLECAGIHRGLGVHISFVRSITMDQFKPEELLRMEKGGNEPLTEWFKSHNI-DLSLP 101
BLAST of Small ArfGAP 1 vs. Ensembl Yeast
Match: GLO3 (ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; shares functional similarity with Gcs1p [Source:SGD;Acc:S000000924]) HSP 1 Score: 81.6481 bits (200), Expect = 3.367e-17 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1 Query: 133 SHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIY 378 + + K+ N+ C DCG + W S FG+ LCI+C+ +HRN+GVHI+ VKS LD WT L+ +L GN K+ + + Sbjct: 15 TQQVFQKLGSNMENRVCFDCGNKNPTWTSVPFGVMLCIQCSAVHRNMGVHITFVKSSTLDKWTINNLRRFKLGGNHKARDFF 96
BLAST of Small ArfGAP 1 vs. Ensembl Yeast
Match: AGE1 (ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in the secretory and endocytic pathways; contains C2C2H2 cysteine/histidine motif [Source:SGD;Acc:S000002932]) HSP 1 Score: 77.0258 bits (188), Expect = 1.020e-15 Identity = 48/122 (39.34%), Postives = 70/122 (57.38%), Query Frame = 1 Query: 145 LLKIIEK--EGNKNCADCGTEGT-RWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELM----GNRKSHEIYEAALPGNF-----TRPQTNYAIEEFIRSKYQYKRYCI 474 LL I+ K + N C DCG+ T W S N LCI+C+G+HR+LG HISK++S+ LD++T L++M L+ N + IYE+ L NF T + +FI KYQ+K++ I Sbjct: 172 LLSIVRKIDKSNLKCCDCGSTATVEWVSINLLCILCIKCSGVHRSLGSHISKIRSLTLDNFTS--LELMHLLQNNVSNSNVNAIYESNL-RNFPVKKITANSDDSERSKFIIDKYQFKKFVI 290
BLAST of Small ArfGAP 1 vs. Ensembl Yeast
Match: GTS1 (Protein involved in Arf3p regulation and in transcription regulation; localizes to the nucleus and to endocytic patches; contains an N-terminal Zn-finger and ArfGAP homology domain, a C-terminal glutamine-rich region, and a UBA (ubiquitin associated) domain; gts1 mutations affect budding, cell size, heat tolerance, sporulation, life span, ultradian rhythms, endocytosis; expression oscillates in a pattern similar to metabolic oscillations [Source:SGD;Acc:S000003149]) HSP 1 Score: 63.1586 bits (152), Expect = 2.638e-11 Identity = 37/111 (33.33%), Postives = 55/111 (49.55%), Query Frame = 1 Query: 145 LLKIIEKEGNKN-CADCGTEGTRWASWNFGIFLCIRCAGIHRNL-----GVHISKVKSVDLDSWTGEQL-QVMELMGNRKSHEIYEAA-LPGNFTRPQTNYAIEEFIRSKY 453 L ++I N N C +CG W S N G+FLC RCA +HR + S VKS+ +D WT E + +++ L GN+ + + +P F +E +IR KY Sbjct: 17 LKELINSSENANKCGECGNFYPTWCSVNLGVFLCGRCASVHRKVFGSRDDDAFSNVKSLSMDRWTREDIDELVSLGGNKGNARFWNPKNVPFPFDGDDDKAIVEHYIRDKY 127
BLAST of Small ArfGAP 1 vs. Ensembl Nematostella
Match: EDO33091 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7ST58]) HSP 1 Score: 154.066 bits (388), Expect = 1.402e-45 Identity = 67/116 (57.76%), Postives = 89/116 (76.72%), Query Frame = 1 Query: 121 KINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY 468 K N + IL+ ++++E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHISKVKSV+LDSWT EQ+ ++ GNR++ +E LP +F RPQT+ A+E FIR KY+ K++ Sbjct: 12 KQNANQAILVDMLKEEKNKYCADCAAKGPRWASWNLGVFICIRCAGIHRNLGVHISKVKSVNLDSWTEEQMASIQSWGNRRAGLYWECYLPEDFRRPQTDSAMEAFIRKKYEQKKF 127
BLAST of Small ArfGAP 1 vs. Ensembl Nematostella
Match: EDO47919 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKJ9]) HSP 1 Score: 108.227 bits (269), Expect = 3.373e-26 Identity = 53/124 (42.74%), Postives = 79/124 (63.71%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQT---NYAIEEFIRSKYQYKRYCISPPK 486 + K+ LL++ ++ GN CADCG + WAS + GIF+CI C+G+HRNLG IS VKS+ LD+WT E+LQ M GN KS+ I+ +P + RP+ + E++IR+KY+ K + P+ Sbjct: 1 MEKNRNALLELAKRPGNNTCADCGAKHPEWASASKGIFICITCSGVHRNLGTQISVVKSLRLDTWTDERLQFMIENGNEKSNAIWAKNVPICYRRPKCTDPHVLREQWIRAKYERKEFIDGAPE 124
BLAST of Small ArfGAP 1 vs. Ensembl Nematostella
Match: EDO43007 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RZU7]) HSP 1 Score: 107.071 bits (266), Expect = 7.485e-25 Identity = 60/167 (35.93%), Postives = 89/167 (53.29%), Query Frame = 1 Query: 151 KIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPG--NFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDKCKSNIAKLKKPASVESESDKTSTPMQESDDSLG-DPDYLID 642 +I + EGNK CADC WAS N GI +CI C+G+HR++GVH+SKV+S+ LD W G+ ++ ME MGN K ++I+EA L TR + + FI+ KY +++ P P + A + +P E E S +++ +G P LID Sbjct: 514 RIRKVEGNKYCADCSAPRPDWASINLGITVCIECSGVHRSMGVHVSKVRSLTLDKWDGDTVEFMEAMGNTKVNKIFEANLNDFPKLTRDSGKHDRQAFIKLKYVEQKFYSPIPAEGLDPEVAE--------ALITRPGDREDELLDISQELEDERSLMGSSPLCLID 672
BLAST of Small ArfGAP 1 vs. Ensembl Nematostella
Match: EDO37809 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SEL6]) HSP 1 Score: 102.064 bits (253), Expect = 2.069e-23 Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQ--TNYAIEE-FIRSKYQYKRY 468 GN+ CADC +WAS N G+ LCI C+GIHR+LGVH+SKV+S+ LD+W E L++M +GN + IYEA + G+ + +N + E +I+SKY Y R+ Sbjct: 416 GNEVCADCNHNDPKWASINLGVVLCIECSGIHRSLGVHVSKVRSLTLDAWEPEHLKLMSELGNSLINSIYEAKIAGDHKKINHLSNRSDREAWIKSKYIYHRF 518
BLAST of Small ArfGAP 1 vs. Ensembl Nematostella
Match: EDO42956 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S052]) HSP 1 Score: 99.3673 bits (246), Expect = 2.378e-22 Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEE---FIRSKYQYKRYCISPPKSDSS 498 GN C DCG WAS N G +CI C+G+HRN+G H+S+V+S+DLD W E VM +GN ++ I+E + GN +P + + EE +IRSKY+ K + P D S Sbjct: 560 GNNICVDCGAPNPDWASLNLGALMCIECSGVHRNIGTHVSRVRSLDLDDWPSEVTAVMCSIGNSLANSIWEGRI-GNREKPTPSSSREEKERWIRSKYENKDFLSELPSCDFS 671
BLAST of Small ArfGAP 1 vs. Ensembl Medaka
Match: smap1 (stromal membrane-associated protein 1 [Source:NCBI gene;Acc:101169097]) HSP 1 Score: 169.474 bits (428), Expect = 1.053e-47 Identity = 76/136 (55.88%), Postives = 100/136 (73.53%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRY------CISPPKSDSSPTT 507 K+N+ H IL K++++E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q M MGN ++ +YEA LP NF RPQT+ A+E FIR KY+ K+Y +P S++ P++ Sbjct: 12 KLNEEHQTILSKLLKEEDNKYCADCEAKGPRWASWNLGVFMCIRCAGIHRNLGVHISRVKSVNLDQWTPEQIQSMVDMGNTRAKHLYEAHLPENFRRPQTDQAVEVFIRDKYERKKYYNKEAAAAAPKTSEAVPSS 147
BLAST of Small ArfGAP 1 vs. Ensembl Medaka
Match: SMAP1 (stromal membrane-associated protein 1 [Source:NCBI gene;Acc:101160389]) HSP 1 Score: 152.14 bits (383), Expect = 6.483e-41 Identity = 83/196 (42.35%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR------------------------------------SKYQYKRYC--ISPPKSDSSPTTEDNDKCKSNIAKLKKPASVESESDKTST 591 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ +YEA LP +F RPQT+ A+E FIR SK + R +SP K P N+ L PA+V + TST Sbjct: 12 KLNEQHQAILSKMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTSEQIQSIQDMGNTKARRLYEANLPDSFRRPQTDQAVEFFIRDKYEKKKYYSKNGLDRSSPKDKKEKEPDRGGKVSSHSKSEESRPVPKVSPAKPAEPPV---------NLLGLDAPAAVSPNNGNTST 198
BLAST of Small ArfGAP 1 vs. Ensembl Medaka
Match: SMAP1 (stromal membrane-associated protein 1 [Source:NCBI gene;Acc:101160389]) HSP 1 Score: 150.214 bits (378), Expect = 1.092e-40 Identity = 83/196 (42.35%), Postives = 106/196 (54.08%), Query Frame = 1 Query: 121 KINKSH-LILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR------------------------------------SKYQYKRYC--ISPPKSDSSPTTEDNDKCKSNIAKLKKPASVESESDKTST 591 K+N+ H IL K++ +E NK CADC +G RWASWN G+F+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ +YEA LP +F RPQT+ A+E FIR SK + R +SP K P N+ L PA+V + TST Sbjct: 12 KLNEQHQAILSKMLREEDNKYCADCEAKGPRWASWNLGVFICIRCAGIHRNLGVHISRVKSVNLDQWTSEQIQSIQDMGNTKARRLYEANLPDSFRRPQTDQAVEFFIRDKYEKKKYYSKNGLDRSSPKDKKEKEPDRGGKVSSHSKSEESRPVPKVSPAKPAEPPV---------NLLGLDAPAAVSPNNGNTST 198
BLAST of Small ArfGAP 1 vs. Ensembl Medaka
Match: smap2 (stromal membrane-associated protein 2 [Source:NCBI gene;Acc:101174757]) HSP 1 Score: 146.747 bits (369), Expect = 6.027e-39 Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 1 Query: 124 INKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIR 444 +++ +L ++ E NK CADC ++G RWASWN GIF+CIRCAGIHRNLGVHIS+VKSV+LD WT EQ+Q ++ MGN K+ +YEA LP F RP+T+ A E FIR Sbjct: 9 VDRYQAVLNSLLALEENKFCADCESKGPRWASWNLGIFICIRCAGIHRNLGVHISRVKSVNLDQWTQEQVQCVQEMGNAKAKRLYEAFLPECFQRPETDQAAEIFIR 115
BLAST of Small ArfGAP 1 vs. Ensembl Medaka
Match: acap2 (ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:NCBI gene;Acc:101158345]) HSP 1 Score: 108.227 bits (269), Expect = 7.659e-25 Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 121 KINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTR-PQ---TNYAIEEFIRSKYQYKRYCISP 480 ++ K L K++ GN C DCG RWAS N GI LCI+C+GIHR+LGVH SKV+S+ LDSW E L++M +GN+ +EIYEA R PQ + +E +I++KY +R+ P Sbjct: 394 RLLKGESALQKVLAIPGNSCCCDCGQPDPRWASINLGITLCIQCSGIHRSLGVHFSKVRSLTLDSWEPELLKLMCELGNKAINEIYEARREELGARKPQPGDPRHEVEAYIKAKYVDRRFVRRP 517
BLAST of Small ArfGAP 1 vs. Planmine SMEST
Match: SMESG000069155.1 (SMESG000069155.1) HSP 1 Score: 662.529 bits (1708), Expect = 0.000e+0 Identity = 332/333 (99.70%), Postives = 333/333 (100.00%), Query Frame = 1 Query: 112 MTSKINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDKCKSNIAKLKKPASVESESDKTSTPMQESDDSLGDPDYLIDLKEKPTKACHKVYSEGDLINFNSNSKTKSCNNDLFDTNNKSKILSLYDKPNSIGGYQSSMLPMXXXXXXXXXXXXIDGQYHSTTSIPASNQNSYLKQIQEKLSTIKDNLTSKFKSYEQPGVLPHQSGNMFSSANRNVPNSKGNQNGGETLSPDLWR 1110 MTSKINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDKCKSNIA+LKKPASVESESDKTSTPMQESDDSLGDPDYLIDLKEKPTKACHKVYSEGDLINFNSNSKTKSCNNDLFDTNNKSKILSLYDKPNSIGGYQSSMLPMSNSSYQKSYGSSIDGQYHSTTSIPASNQNSYLKQIQEKLSTIKDNLTSKFKSYEQPGVLPHQSGNMFSSANRNVPNSKGNQNGGETLSPDLWR Sbjct: 1 MTSKINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDKCKSNIARLKKPASVESESDKTSTPMQESDDSLGDPDYLIDLKEKPTKACHKVYSEGDLINFNSNSKTKSCNNDLFDTNNKSKILSLYDKPNSIGGYQSSMLPMSNSSYQKSYGSSIDGQYHSTTSIPASNQNSYLKQIQEKLSTIKDNLTSKFKSYEQPGVLPHQSGNMFSSANRNVPNSKGNQNGGETLSPDLWR 333
BLAST of Small ArfGAP 1 vs. Planmine SMEST
Match: SMESG000048247.1 (SMESG000048247.1) HSP 1 Score: 159.844 bits (403), Expect = 2.542e-44 Identity = 72/142 (50.70%), Postives = 98/142 (69.01%), Query Frame = 1 Query: 127 NKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAALPGNFTRPQTNYAIEEFIRSKYQYKRYCISPPKSDSSPTTEDNDKCKSNIAKLKK 552 +K +IL +++ + NK C DC ++G RWASW GIFLCIRCAGIHRNLGVH+S+VKSV+LDSWT +Q+ +M+ +GN + IYEA L NF RPQT+ ++E+FIR KY++KRY + P T D I KL++ Sbjct: 13 DKLQIILADLLKDDDNKYCVDCDSKGPRWASWTLGIFLCIRCAGIHRNLGVHLSRVKSVNLDSWTPQQVAMMKEIGNSRGRAIYEANLEDNFRRPQTDSSLEQFIRGKYEHKRYI----AKEWIPPTPSVDSISEEIRKLEQ 150
BLAST of Small ArfGAP 1 vs. Planmine SMEST
Match: SMESG000018614.1 (SMESG000018614.1) HSP 1 Score: 102.834 bits (255), Expect = 3.835e-23 Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAAL---PGNFTRPQTNYAI---EEFIRSKYQYKRYCISPP 483 GN CADCG WAS N G +CI C+G+HR LG HIS+V+S+ LD W E VM+ +GN ++ ++EAA+ P N +P+ N EE+IRSKY+ + + PP Sbjct: 698 GNDFCADCGQPKPDWASLNLGELVCIECSGVHRKLGTHISRVRSLQLDQWAPEWQAVMKAIGNTVANTVWEAAVNVSPRNLKKPELNSPAKDKEEWIRSKYERREFL--PP 806
BLAST of Small ArfGAP 1 vs. Planmine SMEST
Match: SMESG000018614.1 (SMESG000018614.1) HSP 1 Score: 102.834 bits (255), Expect = 4.534e-23 Identity = 49/111 (44.14%), Postives = 68/111 (61.26%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAAL---PGNFTRPQTNYAI---EEFIRSKYQYKRYCISPP 483 GN CADCG WAS N G +CI C+G+HR LG HIS+V+S+ LD W E VM+ +GN ++ ++EAA+ P N +P+ N EE+IRSKY+ + + PP Sbjct: 669 GNDFCADCGQPKPDWASLNLGELVCIECSGVHRKLGTHISRVRSLQLDQWAPEWQAVMKAIGNTVANTVWEAAVNVSPRNLKKPELNSPAKDKEEWIRSKYERREFL--PP 777
BLAST of Small ArfGAP 1 vs. Planmine SMEST
Match: SMESG000075717.1 (SMESG000075717.1) HSP 1 Score: 97.4413 bits (241), Expect = 2.501e-21 Identity = 43/113 (38.05%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 169 GNKNCADCGTEGTRWASWNFGIFLCIRCAGIHRNLGVHISKVKSVDLDSWTGEQLQVMELMGNRKSHEIYEAAL-PGNFTRPQTNYAI---EEFIRSKYQYKRYCISPPKSDS 495 GN+ C DCG+ WAS N GI +CI C+G+HR LG H+S+V+S LD W+ E + VM+ +GN ++ ++EA++ + +P+ + + E ++RSKY+ K + P D+ Sbjct: 718 GNEVCCDCGSPDPCWASLNLGISVCIECSGVHRQLGTHLSRVRSFQLDEWSKEHIAVMQAIGNTLANSVWEASVHASSLKKPEADSSRSDKEAWVRSKYEKKMFLPPLPYLDA 830 The following BLAST results are available for this feature:
BLAST of Small ArfGAP 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Small ArfGAP 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Small ArfGAP 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Small ArfGAP 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30026569 ID=SMED30026569|Name=Small ArfGAP 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1311bpback to top protein sequence of SMED30026569-orf-1 >SMED30026569-orf-1 ID=SMED30026569-orf-1|Name=SMED30026569-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=334bp MTSKINKSHLILLKIIEKEGNKNCADCGTEGTRWASWNFGIFLCIRCAGIback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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