FLYWCH-type zinc finger-containing protein 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30026565 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 4
Homology
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Celegans
Match: F09E5.10 (pep chromosome:WBcel235:II:5348096:5350546:-1 gene:WBGene00017288.1 transcript:F09E5.10.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F09E5.10) HSP 1 Score: 58.151 bits (139), Expect = 1.060e-8 Identity = 39/127 (30.71%), Postives = 63/127 (49.61%), Query Frame = 3 Query: 621 DGTFRVSPNGYDQLY--TIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVP 995 DG F P Y QLY T+ P+V+AL S E+ Y+ + + +L P DFE+A++ A ++ +P A I GC HF +++ L+ + N+P+F L+K + L+F P Sbjct: 433 DGKFSEIPKNYRQLYIATVTDLDTNVAVPLVFALCGSAKEDLYRRK-RWLYLLNLSTYP-----DFEVASVNASRAVWPNADIFGCWRHFKVNLFKNLRKAVGDD--INKPEFVNLLKSIYTLSFAP 551
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A0C2J8U0 (Uncharacterized protein OS=Thelohanellus kitauei OX=669202 GN=RF11_00573 PE=4 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 4.493e-83 Identity = 157/457 (34.35%), Postives = 246/457 (53.83%), Query Frame = 3 Query: 108 LEFVTSQKGNRKLIVQSYLFTKHSENSDGKSLWRCEKRTGTARVHTKDDEIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNVPVSAAHLLPKRTTLARDVRRHRQKVGPND------QDDIMRYSLTQSNXXXX-------XXXXXXXXXXAAQDDLIFLSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIED-PAYRDIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQ-YSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMVTDYNNRDSITYLGDIA 1433 ++ + SQKG +++ + + + N DG SLWRC K R+ K D V + H H + E EK +A ++ R + E R I+ N + V + AA+ LP R + R R++ N+ Q+ I+ L + R + M +F ++L L HWF DGTF+++P + Q++TIH +N V P++Y L+ +T+ Y+ + + ++ L+ L+P SIMVDFE + A + FP +T+ GC+FH GQ +WR++Q EG + YR++ + L K L+AL+F+PP+DV F+ L E PA ++ + +Y ED +IGR+RR RR P F I +W+ RV D LPR+NN++EGWHNAF + VG HPT KL + EQ + Q + R T K YI+++ L ++ Y RD I YL ++ Sbjct: 1 MDIIKSQKGKEQILCGGFRYRRDKLNQDGSSLWRCVKSECLGRLKKKTDGTVQITSEHEHAPDTAKNESEKIKADIRERAKYGVEKPRQIIVNSSVGVTLEAANFLPSYIASQRTIERKRKRPDVNNSRPNTVQEIILPEELKLTTRSQNFLLWDSGNEDTNRMFMFGTSNNLQLLENNPHWFMDGTFKIAPEIFLQVFTIHALVNNRVIPLIYVLMGKKTQADYERVFERVVELRPSLSPMSIMVDFEKGCMNALLNAFPNSTVHGCLFHLGQSLWRRIQREGLTNSYRDDENVKLYSKMLIALSFIPPEDVGTAFDELSESRPA--NLHNLYNYWEDTYIGRMRRNRRDDPLFPISMWNMRGRVADGLPRTNNSVEGWHNAFQSSVGCHHPTIYKLIENFRLEQDLAEQTISRISSGINTQPASKSKYIQLSRRLAAILPTYEGRDLIEYLRAVS 455
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A0C2IYG6 (Uncharacterized protein OS=Thelohanellus kitauei OX=669202 GN=RF11_14163 PE=4 SV=1) HSP 1 Score: 276.174 bits (705), Expect = 7.331e-83 Identity = 157/457 (34.35%), Postives = 246/457 (53.83%), Query Frame = 3 Query: 108 LEFVTSQKGNRKLIVQSYLFTKHSENSDGKSLWRCEKRTGTARVHTKDDEIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNVPVSAAHLLPKRTTLARDVRRHRQKVGPND------QDDIMRYSLTQSNXXXX-------XXXXXXXXXXAAQDDLIFLSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIED-PAYRDIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQ-YSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMVTDYNNRDSITYLGDIA 1433 ++ + SQKG +++ + + + N DG SLWRC K R+ K D V + H H + E EK +A ++ R + E R I+ N + V + AA+ LP R + R R++ N+ Q+ I+ L + R + M +F ++L L HWF DGTF+++P + Q++TIH +N V P++Y L+ +T+ Y+ + + ++ L+ L+P SIMVDFE + A + FP +T+ GC+FH GQ +WR++Q EG + YR++ + L K L+AL+F+PP+DV F+ L E PA ++ + +Y ED +IGR+RR RR P F I +W+ RV D LPR+NN++EGWHNAF + VG HPT KL + EQ + Q + R T K YI+++ L ++ Y RD I YL ++ Sbjct: 1 MDIIKSQKGKEQILCGGFRYRRDKLNQDGSSLWRCVKSECLGRLKKKTDGTVQITSEHEHAPDTAKNESEKIKADIRERAKYGVEKPRQIIVNSSVGVTLEAANFLPSYIASQRTIERKRKRPDVNNSRPNTVQEIILPEELKLTTRSQNFLLWDSGNEDTNRMFMFGTSNNLQLLENNPHWFMDGTFKIAPEIFLQVFTIHALVNNRVIPLIYVLMGKKTQADYERVFERVVELRPSLSPMSIMVDFEKGCMNALLNAFPNSTVHGCLFHLGQSLWRRIQREGLTNSYRDDENVKLYSKMLIALSFIPPEDVGTAFDELSESRPA--NLHNLYNYWEDTYIGRMRRNRRDDPLFPISMWNMRGRVADGLPRTNNSVEGWHNAFQSSVGCHHPTIYKLIENFRFEQDLAEQTISRISSGINTQPASKSKYIQLSRRLAAILPTYEGRDLIEYLRAVS 455
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A5N4B0X7 (Uncharacterized protein OS=Photinus pyralis OX=7054 GN=PPYR_00217 PE=4 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 5.821e-80 Identity = 158/449 (35.19%), Postives = 240/449 (53.45%), Query Frame = 3 Query: 144 LIVQSYLFTKHSENSDGKSLWRC---EKRTGTARVHTKDDEIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNV--PVSAAHLLPKRTTLARDVRRHRQKVG-----PN-----DQDDIMRYSLTQSNXXXXXX------XXXXXXXXAAQDDLIFLSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIEDPAYR---DIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQYSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMVTDYNNRDSITY 1418 L+++ YLF K DG+ W+C +K +AR HT +D +V + HNH +E KA +K R +TT + +++ E + PV A LP + R +RR RQ G PN + D MR + + ++IF+ Q +L L RCEHW+ADGTF+ +P + Q+YTIHG P V+ LL +++ YQ ++Q + L+ L P++IM+DFE AAI AFQ+ FP + GC FH GQC+WRK+Q G + RY N+ +FA+ VK L A++F+P DV+ FE L++ YR D+ ICDY ED +IGR R R PP F LW+ + ++LPR+NN++EGWH F ++ HP+ + +++EQ+ N++ G ++KK Y +N + V Y+ + Y Sbjct: 2 LVLEGYLFEKDKMADDGRIFWKCVEAKKGKCSARRHTLNDAVVKSLLDHNHVPDIAAIEARKAINSIKERAKTTRDAGYAVIAVESSQLLEPVQAK--LPNVECIKRTIRRQRQLQGNYPANPNSLRELNIPDDMRLICVNGQQEPFLLFDNGPDTEHRILIFSTQRNLELLERCEHWYADGTFKTTPPLFTQVYTIHGVRFNTCIPSVFVLLPGKSKVLYQEMIQALKGLRPNLKPSTIMIDFERAAIEAFQTEFPEILVRGCFFHLGQCIWRKVQEHGKAVRYANDVEFAVQVKMLTAISFLPLHDVVLGFEELMDTEYYRNEIDLHPICDYFEDVWIGRPHRNIRRPPLFQYNLWNFYDATNNDLPRTNNSVEGWHRRFTELISAQHPSIWRFIAAIKEEQHMNEIAISHYIQGRDGPRQKKKYRDLNIRIKNCVARYDANEKFLY 448
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A0C2IP16 (Uncharacterized protein OS=Thelohanellus kitauei OX=669202 GN=RF11_13865 PE=4 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 2.992e-78 Identity = 155/457 (33.92%), Postives = 241/457 (52.74%), Query Frame = 3 Query: 108 LEFVTSQKGNRKLIVQSYLFTKHSENSDGKSLWRCEKRTGTARVHTKDDEIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNVPVSAAHLLPKRTTLARDVRRHRQKVGPND------QDDIMRYSLTQSNXXXX-------XXXXXXXXXXAAQDDLIFLSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIED-PAYRDIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQ-YSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMVTDYNNRDSITYLGDIA 1433 ++ + SQKG +++ + + + N DG SLWRC K R+ K D V + H H + E EK +A ++ R + E R I+ N + V + AA+ LP R + R R++ N+ Q+ I+ L + R + M +F ++ L HWF DGTF+++P + Q++TIH +N V P++YA Y+ + + ++ L+ L+P SIMVDFE + A + FP +T+ GC+FH GQ +WR++Q EG + YR++ + L K L+AL+F+PP+DV F+ L E PA ++ + +Y ED +IGR+RR RR P F I +W+ RV D LPR+NN++EGWHNAF + VG HPT KL + EQ + Q + R T K YI+++ L ++ Y RD I YL ++ Sbjct: 1 MDIIKSQKGKEQILCGGFRYRRDKLNQDGSSLWRCVKSECLGRLKKKTDGTVQITSEHEHAPDTAKNESEKIKADIRERAKYGVEKPRQIIVNSSVGVTLEAANFLPSYIASQRTIERKRKRPDVNNSRPNTVQEIILPEELKLTTRSQNFLLWDSGNEDTNRMFMFGTSNNCKLLENNPHWFMDGTFKIAPEIFLQVFTIHALVNNRVIPLIYA--------DYERVFERVVELRPSLSPMSIMVDFEKGCMNALLNAFPNSTVHGCLFHLGQSLWRRIQREGLTNSYRDDENVKLYSKMLIALSFIPPEDVGTAFDELSESRPA--NLHNLYNYWEDTYIGRMRRNRRDDPLFPISMWNMRGRVADGLPRTNNSVEGWHNAFQSSVGCHHPTIYKLIENFRLEQDLAEQTISRISSGINTQPASKSKYIQLSRRLAAILPTYEGRDLIEYLRAVS 447
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. TrEMBL
Match: A0A5N4APK1 (Uncharacterized protein OS=Photinus pyralis OX=7054 GN=PPYR_07018 PE=4 SV=1) HSP 1 Score: 263.462 bits (672), Expect = 1.533e-77 Identity = 168/470 (35.74%), Postives = 254/470 (54.04%), Query Frame = 3 Query: 93 KVTTMLEFVTSQKGNRKLIVQS---YLFTKHSENSDGKSLWRCEKR-TGTARVHTKDD--EIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNVPVSAAHLLPKRTTLARDVRRHRQKVG----PNDQDDI---MRYSLTQSNXXXXXXXXXXXXXX---------AAQDDLIFLSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIEDPAY-RDIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQYSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMVTDYNNRDSITYLGDIA 1433 +VT ++ FVTS + RK I + Y+F+K S N + S+W CEKR R+ T + E+V V HNH + V + +K R T+ET + I+ L NV + LP++ + R +RR R + G P D + + ++Y + + + L + + D A D+L L+R + W+ DGTF V+PN + QLYTIH G V P +YALL ++T+E YQ LLQ++ L GL P +++DFE AA+ AF F ++GC FH Q VWR++Q+EG Y+ DFA V+ + A+AFVPP V++ F+ L+E + + + I DY ED +IGR RR+R PP FSI++W+ + R +D R+NN IEGWH F +V P K L+++Q + Q G + K Y ++ +H +V DY+NR+ I YL I+ Sbjct: 25 EVTPIMSFVTSSRDGRKFIDDNNFVYVFSKKSANKEN-SIWVCEKRGLCKGRIWTIANRVEVVRIVTPHNHAAEATRGPVLNILSRVKERARDTEETPQQILATNLQNVHRNIMAKLPRQDAIKRTIRRQRNQQGLPELPTDLEHLNIPLQYRVIEVDGLEQQFLKYDSQDTLLPDRILIFATDDNLNMLNRSDSWYGDGTFSVAPNLFFQLYTIHVEQYGTVTPAIYALLPNKTKETYQKLLQQLKNLIPGLLPTRVLLDFEAAAMGAFSEEFEGIAVSGCFFHLCQNVWRRVQSEGLQMLYQGNHDFAQWVRMIPAIAFVPPHRVLEAFDELVEYENFPPEAQPIVDYFEDIYIGRRARRQRRPPIFSIEMWNMYQRTLDGRHRTNNNIEGWHRGFQSVCD-TSPNVFKFIESLKKQQTIHAYQINQFITGAPPPRPNKRYATISARIHVIVNDYDNRNIIDYLRGIS 492
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000014782.1 (SMESG000014782.1) HSP 1 Score: 161.384 bits (407), Expect = 3.358e-44 Identity = 103/318 (32.39%), Postives = 162/318 (50.94%), Query Frame = 3 Query: 204 WRCEKRTGT--------ARVHTKDD-EIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNVPVSAA-HLLPKRTTLARDVRRHRQKVGPNDQDDIMRYSLTQSNXXXXXXXXXXXXXXAAQDD----LIF--------LSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIEDPAYRDIEVICDYKEDNFI 1091 + CE+R GT A+V +D +V + H HT E+ K RA +KR+ E T+ET + I+ EL + AA ++P R + ++RR +QK + R + +I + DD LIF + +HWF D TF+V P + QLYT+H + + P ++ LL ++T+ Y L +EI + + ++P +I DFE AAI + F I GC FH Q ++RK+Q+ G RY+N+ DFAL ++++ LAFV ++VI+ FE L E + + + DY EDN+I Sbjct: 38 YECERRRGTVKNTSECRAKVQLNEDLSVVSYLHRHTHTADSVHCEILKVRASIKRKAEETEETPKQILGQELQQLSQQAAVQMVPIRH-IRGNIRRVKQKKNAVHPVPVDRTFEILEEYKCLTDGEKFLIFDSGCDDPNRILIFGTERTLNLIKDSQHWFMDVTFKVVPELFFQLYTVHTLVTESIVPYLFVLLPNKTQITYCLLFEEIKVRQPQVHPTTITTDFERAAINSATECFANVEIHGCFFHLAQNIFRKVQSVGLQGRYQNDEDFALSIQKIAVLAFVLSENVIESFEKLQESLS-EEFATVMDYFEDNYI 353
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000014782.1 (SMESG000014782.1) HSP 1 Score: 161.384 bits (407), Expect = 3.446e-44 Identity = 103/318 (32.39%), Postives = 162/318 (50.94%), Query Frame = 3 Query: 204 WRCEKRTGT--------ARVHTKDD-EIVHEVATHNHTVTHGQVEVEKARAGMKRRGETTDETTRSIVQNELMNVPVSAA-HLLPKRTTLARDVRRHRQKVGPNDQDDIMRYSLTQSNXXXXXXXXXXXXXXAAQDD----LIF--------LSRCEHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIEDPAYRDIEVICDYKEDNFI 1091 + CE+R GT A+V +D +V + H HT E+ K RA +KR+ E T+ET + I+ EL + AA ++P R + ++RR +QK + R + +I + DD LIF + +HWF D TF+V P + QLYT+H + + P ++ LL ++T+ Y L +EI + + ++P +I DFE AAI + F I GC FH Q ++RK+Q+ G RY+N+ DFAL ++++ LAFV ++VI+ FE L E + + + DY EDN+I Sbjct: 40 YECERRRGTVKNTSECRAKVQLNEDLSVVSYLHRHTHTADSVHCEILKVRASIKRKAEETEETPKQILGQELQQLSQQAAVQMVPIRH-IRGNIRRVKQKKNAVHPVPVDRTFEILEEYKCLTDGEKFLIFDSGCDDPNRILIFGTERTLNLIKDSQHWFMDVTFKVVPELFFQLYTVHTLVTESIVPYLFVLLPNKTQITYCLLFEEIKVRQPQVHPTTITTDFERAAINSATECFANVEIHGCFFHLAQNIFRKVQSVGLQGRYQNDEDFALSIQKIAVLAFVLSENVIESFEKLQESLS-EEFATVMDYFEDNYI 355
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000070712.1 (SMESG000070712.1) HSP 1 Score: 122.865 bits (307), Expect = 7.786e-30 Identity = 61/162 (37.65%), Postives = 94/162 (58.02%), Query Frame = 3 Query: 606 EHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIEDPAYRDIEVICDYKEDNFI 1091 ++WF DGTF+V P + QLYT+ + G V+ + +T+ Y L +EI +L+ ++PA+I DFE AAI A F I GC FH Q +++K Q+ G +RY+N+ DFAL ++ + A AF P + VI+ FE L + + + DY E+N+I Sbjct: 74 QNWFMDGTFKVVPELFFQLYTVKALVTGSNCSVLVFPPTKKTQIVYCRLFEEIKVLQPQVHPATITTDFERAAINAATECFANIKIHGCFFHNAQKIFKKFQSVGLQDRYQNDEDFALSIRMIAASAFFPIEKVIESFETL-QKSLSDEFATVMDYFEENYI 234
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000073500.1 (SMESG000073500.1) HSP 1 Score: 125.561 bits (314), Expect = 1.123e-29 Identity = 78/270 (28.89%), Postives = 129/270 (47.78%), Query Frame = 3 Query: 606 EHWFADGTFRVSPNGYDQLYTIHGFINGEVFPVVYALLSSRTEEAYQHLLQEILILKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLI-----EDPAYRDIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQYSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMVTDYNN 1400 E + DGTF P+ + QLYT H + P +Y LL + + Y + + + L L+P ++VDF+ A + A F A + GC FH Q + R++ GF Y + D L++K L ALAFVP +V+ F+ L EDP + Y +I F +++W+Q+ +N P++ N EG+HNA N +HP+ L LQ++ ++L + KKK+ Y +++ + T V +Y++ Sbjct: 1520 ETIYGDGTFDKCPSMFYQLYTWHVQVGTSYPPCIYFLLQKKNRKTYIRMFEIMKQLLTNLSPRKVLVDFKKACMTAAAVAFLDAEVKGCYFHLCQSLVRRVNCVGFKNLYESNVDVKLMLKSLCALAFVPANEVMSAFDILARTFPDEDP----YNAVLSYFFQTYI---EGAIGRDSMFPVRIWNQWEAAAENSPKTTNCCEGFHNALNATFHCSHPSIWLLYDGLQRDIACHRLTLANYQ-TERPEKKKRKYESLHQGVATAVQEYDS 1781
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Planmine SMEST
Match: SMESG000054573.1 (SMESG000054573.1) HSP 1 Score: 121.709 bits (304), Expect = 2.829e-29 Identity = 66/205 (32.20%), Postives = 110/205 (53.66%), Query Frame = 3 Query: 771 LKAGLNPASIMVDFELAAIRAFQSTFPTATITGCMFHFGQCVWRKLQAEGFSERYRNEPDFALLVKRLLALAFVPPQDVIDLFEHLIEDPAYRDIEVICDYKEDNFIXXXXXXXXXXXXFSIQLWSQFSRVIDNLPRSNNAIEGWHNAFNNVVGFAHPTTTKLARKLQQEQYSNQLLRRQLELGTTAGKKKKTYIRVNEALHTMV 1385 +K L P +++ DFE AA+ F + F + I G FHF QC+ RK+Q G++ RY N+PD+ + ++ L+A+A+V D + +E LI+ ++ +++ + +Y ED FI F + + NN++EG HNAF V AH T KL KLQ++Q +NQ+ ++ G +KK Y ++ LH ++ Sbjct: 281 IKPRLQPQTVITDFEAAAMNVFTNVF-SPQIHGYHFHFEQCISRKVQEYGYAGRYNNKPDYVMYIQMLVAMAYVSNNDKVSFYEELIDLDSFPEVDQLLNYFEDLFIEEDENDEEMVLFFHPIYGTATKLSVMTFLIHNNSMEGRHNAFARTVQIAHTTLPKLVVKLQKKQNNNQMNIERMLAGEVPPMRKKKYRDLDSQLHIVL 484 The following BLAST results are available for this feature:
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of FLYWCH-type zinc finger-containing protein 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30026565 ID=SMED30026565|Name=FLYWCH-type zinc finger-containing protein 1|organism=Schmidtea mediterranea sexual|type=transcript|length=1727bpback to top protein sequence of SMED30026565-orf-1 >SMED30026565-orf-1 ID=SMED30026565-orf-1|Name=SMED30026565-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=452bp MLEFVTSQKGNRKLIVQSYLFTKHSENSDGKSLWRCEKRTGTARVHTKDDback to top Annotated Terms
The following terms have been associated with this transcript:
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