10 kDa heat shock protein, mitochondrial

Overview
Name10 kDa heat shock protein, mitochondrial
Smed IDSMED30026539
Length (bp)503
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 10 kDa heat shock protein, mitochondrial (SMED30026539) t-SNE clustered cells

Violin plots show distribution of expression levels for 10 kDa heat shock protein, mitochondrial (SMED30026539) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 10 kDa heat shock protein, mitochondrial (SMED30026539) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 10 kDa heat shock protein, mitochondrial (SMED30026539) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30026539

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 18

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30026539SMESG000000556.1 SmedASXL_018715SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30026539SMESG000000556.1 SmedASXL_018715SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
pharynxSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30026539SMESG000000556.1 dd_Smed_v4_421_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30026539SMESG000000556.1 Contig35530newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30026539SMESG000000556.1 Contig35530uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30026539SMESG000000556.1 Contig20525newmark_estsPMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Smed sexual biotypeSMED30026539SMESG000000556.1 Contig20525uc_Smed_v2PMID:29674431
Fincher et al., 2018		FACS sorted cell population adult hermaphrodite single-cell RNA-sequencing evidence
Category 2 cellSMED30026539SMESG000000556.1 dd_Smed_v6_421_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
progenitor cellSMED30026539SMESG000000556.1 dd_Smed_v6_421_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30026539SMESG000000556.1 dd_Smed_v6_421_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Human
Match: HSPE1 (heat shock protein family E (Hsp10) member 1 [Source:HGNC Symbol;Acc:HGNC:5269])

HSP 1 Score: 127.102 bits (318), Expect = 4.946e-38
Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+ D+LGK+
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Human
Match: HSPE1 (heat shock protein family E (Hsp10) member 1 [Source:HGNC Symbol;Acc:HGNC:5269])

HSP 1 Score: 108.227 bits (269), Expect = 1.332e-30
Identity = 54/86 (62.79%), Postives = 72/86 (83.72%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEK 386
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDK 86
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Human
Match: HSPE1-MOB4 (HSPE1-MOB4 readthrough [Source:HGNC Symbol;Acc:HGNC:49184])

HSP 1 Score: 78.9518 bits (193), Expect = 1.062e-17
Identity = 36/62 (58.06%), Postives = 48/62 (77.42%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFP 314
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +  D   +P
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKDFYNWP 62
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Human
Match: HSPE1 (heat shock protein family E (Hsp10) member 1 [Source:HGNC Symbol;Acc:HGNC:5269])

HSP 1 Score: 66.2402 bits (160), Expect = 8.752e-15
Identity = 28/43 (65.12%), Postives = 40/43 (93.02%), Query Frame = 3 
Query:  300 GKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+ D+LGK+
Sbjct:    3 GEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 45
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Celegans
Match: Y22D7AL.10 (pep chromosome:WBcel235:III:1617151:1618954:-1 gene:WBGene00021248.1 transcript:Y22D7AL.10.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y22D7AL.10)

HSP 1 Score: 127.487 bits (319), Expect = 1.542e-38
Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 3 
Query:  117 TFLEMASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            T +  +S   K F PL+DRVL++R  A+T +KGGIMLPE ++GKVLE  V++ G G+R   G++  LTVK GD+V LPEYGGTKV++E+KEY +FRESDLLG F 
Sbjct:    4 TAVRRSSNVLKTFKPLYDRVLVERVAAETKTKGGIMLPEKSQGKVLEATVVSAGAGLRNEKGELVALTVKPGDRVLLPEYGGTKVVVEDKEYSIFRESDLLGVFH 108
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Celegans
Match: Y22D7AL.10 (pep chromosome:WBcel235:III:1617151:1618929:-1 gene:WBGene00021248.1 transcript:Y22D7AL.10.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y22D7AL.10)

HSP 1 Score: 127.487 bits (319), Expect = 1.542e-38
Identity = 60/105 (57.14%), Postives = 79/105 (75.24%), Query Frame = 3 
Query:  117 TFLEMASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            T +  +S   K F PL+DRVL++R  A+T +KGGIMLPE ++GKVLE  V++ G G+R   G++  LTVK GD+V LPEYGGTKV++E+KEY +FRESDLLG F 
Sbjct:    4 TAVRRSSNVLKTFKPLYDRVLVERVAAETKTKGGIMLPEKSQGKVLEATVVSAGAGLRNEKGELVALTVKPGDRVLLPEYGGTKVVVEDKEYSIFRESDLLGVFH 108
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Fly
Match: CG11267 (gene:FBgn0036334 transcript:FBtr0075875)

HSP 1 Score: 114.39 bits (285), Expect = 2.867e-33
Identity = 60/102 (58.82%), Postives = 75/102 (73.53%), Query Frame = 3 
Query:  135 SKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMR-ANDGKIFPLTVKIGDKVFLPEYGGTKVLLE--EKEYYLFRESDLLGKFD 431
            + A KK +P+ DR+LIQR +A T +KGGI+LPE   GKVLEG VLAVG G R A+ G   P+ VK GD+V LPE+GGTKV LE  +KE +LFRESD+L K +
Sbjct:    2 AAAIKKIIPMLDRILIQRAEALTKTKGGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNHIPIGVKEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKLE 103
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Fly
Match: CG9920 (gene:FBgn0038200 transcript:FBtr0082917)

HSP 1 Score: 100.138 bits (248), Expect = 9.037e-28
Identity = 52/101 (51.49%), Postives = 71/101 (70.30%), Query Frame = 3 
Query:  135 SKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGK-IFPLTVKIGDKVFLPEYGGTKVLLEEK-EYYLFRESDLLGKFD 431
            S   KK +P+ DR+LIQRF+ +TT+ GGI+LPE +  K ++G V+AVG G R   G     + VK GD+V LP+YGGTKV +++K EY LFRESD+L K +
Sbjct:    2 SNVIKKVIPMLDRILIQRFEVKTTTAGGILLPEESVPKEMQGVVVAVGPGARNPAGAGHLSVGVKEGDRVLLPKYGGTKVDMDDKREYVLFRESDILAKLE 102
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Zebrafish
Match: hspe1 (heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2])

HSP 1 Score: 136.732 bits (343), Expect = 4.621e-42
Identity = 59/97 (60.82%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 KAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            +AF+KFLP+FDRVL++R  A+T S+GGIM+PE ++ KVL+  V+AVG G    DGK+ P+ VK+GDKV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 QAFRKFLPMFDRVLVERLAAETVSRGGIMIPEKSQAKVLQATVVAVGPGSTNKDGKVIPVCVKVGDKVLLPEYGGTKVMLEDKDYFLFRDADILGKY 98
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Zebrafish
Match: hspe1 (heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2])

HSP 1 Score: 136.732 bits (343), Expect = 4.621e-42
Identity = 59/97 (60.82%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 KAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            +AF+KFLP+FDRVL++R  A+T S+GGIM+PE ++ KVL+  V+AVG G    DGK+ P+ VK+GDKV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 QAFRKFLPMFDRVLVERLAAETVSRGGIMIPEKSQAKVLQATVVAVGPGSTNKDGKVIPVCVKVGDKVLLPEYGGTKVMLEDKDYFLFRDADILGKY 98
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Zebrafish
Match: hspe1 (heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2])

HSP 1 Score: 136.732 bits (343), Expect = 4.621e-42
Identity = 59/97 (60.82%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 KAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            +AF+KFLP+FDRVL++R  A+T S+GGIM+PE ++ KVL+  V+AVG G    DGK+ P+ VK+GDKV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 QAFRKFLPMFDRVLVERLAAETVSRGGIMIPEKSQAKVLQATVVAVGPGSTNKDGKVIPVCVKVGDKVLLPEYGGTKVMLEDKDYFLFRDADILGKY 98
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Zebrafish
Match: hspe1 (heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2])

HSP 1 Score: 136.732 bits (343), Expect = 4.621e-42
Identity = 59/97 (60.82%), Postives = 82/97 (84.54%), Query Frame = 3 
Query:  138 KAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            +AF+KFLP+FDRVL++R  A+T S+GGIM+PE ++ KVL+  V+AVG G    DGK+ P+ VK+GDKV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 QAFRKFLPMFDRVLVERLAAETVSRGGIMIPEKSQAKVLQATVVAVGPGSTNKDGKVIPVCVKVGDKVLLPEYGGTKVMLEDKDYFLFRDADILGKY 98
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Zebrafish
Match: hspe1 (heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2])

HSP 1 Score: 136.346 bits (342), Expect = 7.251e-42
Identity = 59/96 (61.46%), Postives = 81/96 (84.38%), Query Frame = 3 
Query:  141 AFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            AF+KFLP+FDRVL++R  A+T S+GGIM+PE ++ KVL+  V+AVG G    DGK+ P+ VK+GDKV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 AFRKFLPMFDRVLVERLAAETVSRGGIMIPEKSQAKVLQATVVAVGPGSTNKDGKVIPVCVKVGDKVLLPEYGGTKVMLEDKDYFLFRDADILGKY 97
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Xenopus
Match: syt5 (synaptotagmin 5 [Source:Xenbase;Acc:XB-GENE-991349])

HSP 1 Score: 135.961 bits (341), Expect = 1.506e-41
Identity = 61/99 (61.62%), Postives = 84/99 (84.85%), Query Frame = 3 
Query:  132 ASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            A +AFKKF+PLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG+G R   G I P++VK+G+K+ LPEYGGTKV+L++KEY+LFR+ D+LGK+
Sbjct:    1 AVRAFKKFVPLFDRVLVERLAAETVTKGGIMLPEKSQGKVLQATVVAVGDGSRGKTGDIQPVSVKVGEKILLPEYGGTKVVLDDKEYFLFRDGDILGKY 99
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Xenopus
Match: syt5 (synaptotagmin 5 [Source:Xenbase;Acc:XB-GENE-991349])

HSP 1 Score: 117.087 bits (292), Expect = 2.922e-34
Identity = 53/86 (61.63%), Postives = 72/86 (83.72%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEK 386
            MA +AFKKF+PLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG+G R   G I P++VK+G+K+ LPEYGGTKV+L++K
Sbjct:    1 MAVRAFKKFVPLFDRVLVERLAAETVTKGGIMLPEKSQGKVLQATVVAVGDGSRGKTGDIQPVSVKVGEKILLPEYGGTKVVLDDK 86
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Mouse
Match: Hspe1 (heat shock protein 1 (chaperonin 10) [Source:MGI Symbol;Acc:MGI:104680])

HSP 1 Score: 129.413 bits (324), Expect = 5.142e-39
Identity = 63/100 (63.00%), Postives = 86/100 (86.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+SD+LGK+
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKY 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Mouse
Match: Hspe1-rs1 (heat shock protein 1 (chaperonin 10), related sequence 1 [Source:MGI Symbol;Acc:MGI:1935159])

HSP 1 Score: 125.561 bits (314), Expect = 1.725e-37
Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MA +AF+KFL LFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+SD+LGK+
Sbjct:    1 MAGQAFRKFLLLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKY 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. UniProt/SwissProt
Match: sp|Q5DC69|CH10_SCHJA (10 kDa heat shock protein, mitochondrial OS=Schistosoma japonicum OX=6182 GN=SJCHGC01960 PE=3 SV=2)

HSP 1 Score: 144.821 bits (364), Expect = 2.534e-44
Identity = 66/101 (65.35%), Postives = 85/101 (84.16%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            M+++AF+KF PLFDRVL+QRF+A+T SKGGIMLPE  KGKVLE  V+A G G++   G++ P+ V +GDKVFLPEYGGTKV+LE+ EY+LFRESD+L KF+
Sbjct:    1 MSARAFRKFAPLFDRVLVQRFEAETKSKGGIMLPEKAKGKVLEATVVAHGPGVKNEKGEVVPVCVTVGDKVFLPEYGGTKVVLEDTEYFLFRESDILAKFE 101
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. UniProt/SwissProt
Match: sp|Q9W6X3|CH10_ORYLA (10 kDa heat shock protein, mitochondrial OS=Oryzias latipes OX=8090 GN=hspe1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.388e-38
Identity = 58/96 (60.42%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:  141 AFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G     G++ P++VK+G+KV LP+YGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 AFRKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVKVGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKY 97
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. UniProt/SwissProt
Match: sp|Q64433|CH10_MOUSE (10 kDa heat shock protein, mitochondrial OS=Mus musculus OX=10090 GN=Hspe1 PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 3.597e-38
Identity = 63/100 (63.00%), Postives = 86/100 (86.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+SD+LGK+
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKY 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. UniProt/SwissProt
Match: sp|P26772|CH10_RAT (10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus OX=10116 GN=Hspe1 PE=1 SV=3)

HSP 1 Score: 127.102 bits (318), Expect = 2.375e-37
Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+ D+LGK+
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. UniProt/SwissProt
Match: sp|P61604|CH10_HUMAN (10 kDa heat shock protein, mitochondrial OS=Homo sapiens OX=9606 GN=HSPE1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 2.375e-37
Identity = 62/100 (62.00%), Postives = 85/100 (85.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MA +AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G +   G+I P++VK+GDKV LPEYGGTKV+L++K+Y+LFR+ D+LGK+
Sbjct:    1 MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. TrEMBL
Match: A0A2U8U4E3 (HSP10 OS=Dugesia japonica OX=6161 GN=hsp10 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 6.774e-58
Identity = 90/101 (89.11%), Postives = 99/101 (98.02%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            MASKAFKKFLPLFDRVLIQRF+AQ+TSKGGIMLPE++KGKVLEGEVLAVG+GMR NDGK+ PLTVKIGDKVFLPEYGGTK+LL+EKEYYLFRE+DLLGKFD
Sbjct:    1 MASKAFKKFLPLFDRVLIQRFEAQSTSKGGIMLPETSKGKVLEGEVLAVGDGMRTNDGKVMPLTVKIGDKVFLPEYGGTKLLLDEKEYYLFREADLLGKFD 101
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. TrEMBL
Match: U6JKU1 (Heat shock 10 kDa protein 1 OS=Echinococcus granulosus OX=6210 GN=EGR_09751 PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.315e-43
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            MA+KAFK FLPLFDRVL+QRF+A +T+KGGIMLP+ +KGKVLE  V+A G G     G   P+ VK+GD VFLPEYGGTKV+LEEKEYYLFRESD+L K  
Sbjct:   25 MAAKAFKNFLPLFDRVLVQRFEATSTTKGGIMLPDKSKGKVLEATVVAAGPGRITEHGNTVPICVKVGDNVFLPEYGGTKVILEEKEYYLFRESDILAKIQ 125
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. TrEMBL
Match: A0A068XVC8 (Heat shock 10 kDa protein 1 OS=Echinococcus multilocularis OX=6211 GN=EmuJ_000320800 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 6.679e-43
Identity = 69/101 (68.32%), Postives = 81/101 (80.20%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            MA+KAFK FLPLFDRVL+QRF+A +T+KGGIMLP+ +KGKVLE  V+A G G     G   P+ VK+GD VFLPEYGGTKV+LEEKEYYLFRESD+L K  
Sbjct:   25 MAAKAFKNFLPLFDRVLVQRFEATSTTKGGIMLPDKSKGKVLEATVVAAGPGRITEHGNTVPICVKVGDNVFLPEYGGTKVILEEKEYYLFRESDILAKIQ 125
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. TrEMBL
Match: A0A0R3U9G9 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS3568 PE=3 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.322e-43
Identity = 70/100 (70.00%), Postives = 81/100 (81.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            MASKAFK+FLPLFDRVL+QRF+A  T+KGGIM+PE  KGKVLE  V+A G G     GK  PL VK+G+ VFLPEYGGTKV+LE+KEYYLFRESD+L K 
Sbjct:    1 MASKAFKRFLPLFDRVLVQRFEATATTKGGIMIPEKAKGKVLEATVVAAGPGRMDESGKTIPLCVKVGENVFLPEYGGTKVVLEDKEYYLFRESDILAKI 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. TrEMBL
Match: A0A183WH28 (Uncharacterized protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS11432 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.352e-43
Identity = 68/100 (68.00%), Postives = 86/100 (86.00%), Query Frame = 3 
Query:  132 ASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            A++AF+KF PLFDRVL+QRF+A+T SKGGIMLPE +KGKVLEG V+A G G++   G+I P+ V +GDKVFLPEYGGTKV+LE+ EY+LFRESD+L KF+
Sbjct:    5 AARAFRKFAPLFDRVLVQRFEAETKSKGGIMLPEKSKGKVLEGTVVAHGPGVKNEKGEIIPMCVTVGDKVFLPEYGGTKVVLEDNEYFLFRESDILAKFE 104
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Cavefish
Match: hspe1 (heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:103043505])

HSP 1 Score: 137.117 bits (344), Expect = 1.417e-40
Identity = 62/108 (57.41%), Postives = 88/108 (81.48%), Query Frame = 3 
Query:  105 LLETTFLEMASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            L  T+  +MA KAF+KFLP+FDRVL++R  A++ +KGGIMLPE ++GKVL+  V+AVG G     G + P++VK+G+KV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:  130 LPNTSTADMA-KAFRKFLPMFDRVLVERLAAESVTKGGIMLPEKSQGKVLQATVVAVGPGALNKSGDVTPVSVKVGEKVLLPEYGGTKVILEDKDYFLFRDADILGKY 236
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Cavefish
Match: hspe1 (heat shock protein family E (Hsp10) member 1 [Source:NCBI gene;Acc:103043505])

HSP 1 Score: 128.642 bits (322), Expect = 5.903e-39
Identity = 56/96 (58.33%), Postives = 81/96 (84.38%), Query Frame = 3 
Query:  141 AFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            +F+KFLP+FDRVL++R  A++ +KGGIMLPE ++GKVL+  V+AVG G     G + P++VK+G+KV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    2 SFRKFLPMFDRVLVERLAAESVTKGGIMLPEKSQGKVLQATVVAVGPGALNKSGDVTPVSVKVGEKVLLPEYGGTKVILEDKDYFLFRDADILGKY 97
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Yeast
Match: HSP10 (Mitochondrial matrix co-chaperonin; inhibits the ATPase activity of Hsp60p, a mitochondrial chaperonin; involved in protein folding and sorting in the mitochondria; 10 kD heat shock protein with similarity to E. coli groES [Source:SGD;Acc:S000005546])

HSP 1 Score: 81.6481 bits (200), Expect = 2.836e-21
Identity = 42/99 (42.42%), Postives = 63/99 (63.64%), Query Frame = 3 
Query:  138 KAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMR-ANDGKIFPLTVKIGDKVFLPEYGGTKVLL-EEKEYYLFRESDLLGKF 428
            K+ K  +PL DRVL+QR  AQ  +  G+ LPE    K+ + EV+AVG G   AN  K+ P  VK+GD+V +P++GG+ + L  + E  LFR++++L K 
Sbjct:    6 KSAKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANGNKVVP-QVKVGDQVLIPQFGGSTIKLGNDDEVILFRDAEILAKI 103
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Nematostella
Match: EDO48906 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RHS8])

HSP 1 Score: 120.939 bits (302), Expect = 3.186e-36
Identity = 51/97 (52.58%), Postives = 78/97 (80.41%), Query Frame = 3 
Query:  141 AFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            A ++F+PLFDR+++++F  +  +KGG++LPE  + KVLEG V+A+G G R  DGK  P++V +GDKV LPEYGGTK+ +++KEY+++R+ DLLGKF+
Sbjct:    4 ALRRFVPLFDRIVVEKFLPEVKTKGGVLLPEKGQSKVLEGTVVAIGPGARDKDGKHVPMSVNVGDKVLLPEYGGTKINVDDKEYHIYRDGDLLGKFE 100
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Medaka
Match: hspe1 (heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2])

HSP 1 Score: 130.954 bits (328), Expect = 9.528e-40
Identity = 59/96 (61.46%), Postives = 82/96 (85.42%), Query Frame = 3 
Query:  141 AFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF 428
            AF+KFLPLFDRVL++R  A+T +KGGIMLPE ++GKVL+  V+AVG G     G++ P++VK+G+KV LPEYGGTKV+LE+K+Y+LFR++D+LGK+
Sbjct:    4 AFRKFLPLFDRVLVERLMAETVTKGGIMLPEKSQGKVLQATVVAVGPGSMNQKGEVQPMSVKVGEKVLLPEYGGTKVVLEDKDYFLFRDADILGKY 99
[Close]
BLAST of 10 kDa heat shock protein, mitochondrial vs. Planmine SMEST
Match: SMESG000000556.1 (SMESG000000556.1)

HSP 1 Score: 200.29 bits (508), Expect = 2.914e-67
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 3 
Query:  129 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 431
            MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD
Sbjct:    1 MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVGEGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKFD 101
The following BLAST results are available for this feature:
BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
HSPE14.946e-3862.00heat shock protein family E (Hsp10) member 1 [Sour... [more]
HSPE11.332e-3062.79heat shock protein family E (Hsp10) member 1 [Sour... [more]
HSPE1-MOB41.062e-1758.06HSPE1-MOB4 readthrough [Source:HGNC Symbol;Acc:HGN... [more]
HSPE18.752e-1565.12heat shock protein family E (Hsp10) member 1 [Sour... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Y22D7AL.101.542e-3857.14pep chromosome:WBcel235:III:1617151:1618954:-1 gen... [more]
Y22D7AL.101.542e-3857.14pep chromosome:WBcel235:III:1617151:1618929:-1 gen... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
CG112672.867e-3358.82gene:FBgn0036334 transcript:FBtr0075875[more]
CG99209.037e-2851.49gene:FBgn0038200 transcript:FBtr0082917[more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
hspe14.621e-4260.82heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-... [more]
hspe14.621e-4260.82heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-... [more]
hspe14.621e-4260.82heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-... [more]
hspe14.621e-4260.82heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-... [more]
hspe17.251e-4261.46heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
syt51.506e-4161.62synaptotagmin 5 [Source:Xenbase;Acc:XB-GENE-991349... [more]
syt52.922e-3461.63synaptotagmin 5 [Source:Xenbase;Acc:XB-GENE-991349... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2
Match NameE-valueIdentityDescription
Hspe15.142e-3963.00heat shock protein 1 (chaperonin 10) [Source:MGI S... [more]
Hspe1-rs11.725e-3762.00heat shock protein 1 (chaperonin 10), related sequ... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q5DC69|CH10_SCHJA2.534e-4465.3510 kDa heat shock protein, mitochondrial OS=Schist... [more]
sp|Q9W6X3|CH10_ORYLA1.388e-3860.4210 kDa heat shock protein, mitochondrial OS=Oryzia... [more]
sp|Q64433|CH10_MOUSE3.597e-3863.0010 kDa heat shock protein, mitochondrial OS=Mus mu... [more]
sp|P26772|CH10_RAT2.375e-3762.0010 kDa heat shock protein, mitochondrial OS=Rattus... [more]
sp|P61604|CH10_HUMAN2.375e-3762.0010 kDa heat shock protein, mitochondrial OS=Homo s... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2U8U4E36.774e-5889.11HSP10 OS=Dugesia japonica OX=6161 GN=hsp10 PE=2 SV... [more]
U6JKU14.315e-4368.32Heat shock 10 kDa protein 1 OS=Echinococcus granul... [more]
A0A068XVC86.679e-4368.32Heat shock 10 kDa protein 1 OS=Echinococcus multil... [more]
A0A0R3U9G97.322e-4370.00Uncharacterized protein OS=Mesocestoides corti OX=... [more]
A0A183WH289.352e-4368.00Uncharacterized protein OS=Trichobilharzia regenti... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
hspe11.417e-4057.41heat shock protein family E (Hsp10) member 1 [Sour... [more]
hspe15.903e-3958.33heat shock protein family E (Hsp10) member 1 [Sour... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
HSP102.836e-2142.42Mitochondrial matrix co-chaperonin; inhibits the A... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO489063.186e-3652.58Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
hspe19.528e-4061.46heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-... [more]
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BLAST of 10 kDa heat shock protein, mitochondrial vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000000556.12.914e-67100.00SMESG000000556.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30026539 ID=SMED30026539|Name=10 kDa heat shock protein, mitochondrial|organism=Schmidtea mediterranea sexual|type=transcript|length=503bp
ACTGTATAATAGTACATAAAACCTTAATTTAAATAAGATAAATTATTCTG
TAACATTCTAATTAAATTTTATAAATATAATTGTTTATTCAAGCTCATAT
CATTCTTCTAGAAACCACGTTTTTAGAAATGGCCTCAAAAGCATTTAAGA
AATTTTTGCCTTTATTTGATAGAGTTCTAATTCAAAGATTTGATGCTCAA
ACCACCTCCAAAGGTGGAATAATGCTTCCTGAATCAACGAAAGGTAAAGT
TTTAGAGGGTGAAGTTCTTGCTGTTGGTGAAGGAATGCGGGCGAATGATG
GGAAAATTTTTCCACTAACTGTCAAAATCGGCGATAAAGTATTTTTGCCC
GAGTACGGAGGAACCAAAGTTTTATTAGAAGAAAAGGAGTACTATTTATT
TCGCGAGTCAGATCTTTTGGGAAAGTTTGATTGAATGAAATTATGTTAAT
CGCATTTAGTGTATTTTAATTAGAAATAAATAGTTTTATAGTAATCAAAA
AAA
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protein sequence of SMED30026539-orf-1

>SMED30026539-orf-1 ID=SMED30026539-orf-1|Name=SMED30026539-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=102bp
MASKAFKKFLPLFDRVLIQRFDAQTTSKGGIMLPESTKGKVLEGEVLAVG
EGMRANDGKIFPLTVKIGDKVFLPEYGGTKVLLEEKEYYLFRESDLLGKF
D*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: cellular component
TermDefinition
GO:0005739mitochondrion
GO:0005759mitochondrial matrix
GO:0005737cytoplasm
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000028Category 2 cell
PLANA:0000120progenitor cell
PLANA:0000429neoblast
PLANA:0002032epidermal cell
PLANA:0002109X1 cell
PLANA:0002111X2 cell
PLANA:0003116parenchymal cell
Vocabulary: INTERPRO
TermDefinition
IPR037124Chaperonin_GroES_sf
IPR020818Chaperonin_GroES
IPR018369Chaprnonin_Cpn10_CS
IPR011032GroES-like_sf
Vocabulary: biological process
TermDefinition
GO:0006457protein folding
Vocabulary: molecular function
TermDefinition
GO:0005524ATP binding
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 66..78
score: 47.04
coord: 87..100
score: 34.67
coord: 31..52
score: 47.96
coord: 9..24
score: 41.02
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 8..100
e-value: 1.3E-37
score: 141.0
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 9..99
e-value: 2.8E-28
score: 97.8
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 1..100
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 8..100
e-value: 3.77892E-38
score: 121.075
IPR037124GroES chaperonin superfamilyGENE3DG3DSA:2.30.33.40coord: 1..101
e-value: 2.5E-39
score: 135.4
NoneNo IPR availablePANTHERPTHR10772:SF010 KDA HEAT SHOCK PROTEIN, MITOCHONDRIALcoord: 1..100
IPR018369Chaperonin GroES, conserved sitePROSITEPS00681CHAPERONINS_CPN10coord: 9..33
IPR011032GroES-like superfamilySUPERFAMILYSSF50129GroES-likecoord: 7..100