Rho-related GTP-binding protein

Overview


Name	Rho-related GTP-binding protein
Smed ID	SMED30026534
Length (bp)	1215

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Rho-related GTP-binding protein (SMED30026534) t-SNE clustered cells

Violin plots show distribution of expression levels for Rho-related GTP-binding protein (SMED30026534) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Rho-related GTP-binding protein (SMED30026534) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Rho-related GTP-binding protein (SMED30026534) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30026534

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 14

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pharynx	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neuron	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30026534	SMESG000022390.1	Contig39312	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30026534	SMESG000022390.1	Contig39312	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
intestinal phagocyte	SMED30026534	SMESG000022390.1	dd_Smed_v6_578_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
parenchymal cell	SMED30026534	SMESG000022390.1	dd_Smed_v6_578_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
epidermis	SMED30026534	SMESG000022390.1	dd_Smed_v4_578_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of Rho-related GTP-binding protein vs. Ensembl Human
Match: RHOA (ras homolog family member A [Source:HGNC Symbol;Acc:HGNC:667])

HSP 1 Score: 303.523 bits (776), Expect = 1.234e-102
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Human
Match: RHOC (ras homolog family member C [Source:HGNC Symbol;Acc:HGNC:669])

HSP 1 Score: 297.745 bits (761), Expect = 2.511e-100
Identity = 142/171 (83.04%), Postives = 155/171 (90.64%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Human
Match: RHOC (ras homolog family member C [Source:HGNC Symbol;Acc:HGNC:669])

HSP 1 Score: 296.59 bits (758), Expect = 6.754e-100
Identity = 142/171 (83.04%), Postives = 155/171 (90.64%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

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Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

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Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
Match: rho-1 (Ras-like GTP-binding protein rhoA [Source:UniProtKB/Swiss-Prot;Acc:Q22038])

HSP 1 Score: 295.434 bits (755), Expect = 7.560e-100
Identity = 142/171 (83.04%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSS-RKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFP+VYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEV+HFC NVPIILVGNK+DLR+D  + R+  K K E VK E G+A+A++IGA+AY+ECSAKTKDG+REVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDLRSDPQTVRELAKMKQEPVKPEQGRAIAEQIGAFAYLECSAKTKDGIREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
Match: ced-10 (Ras-related protein ced-10 [Source:UniProtKB/Swiss-Prot;Acc:Q03206])

HSP 1 Score: 195.282 bits (495), Expect = 1.009e-60
Identity = 90/166 (54.22%), Postives = 118/166 (71.08%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRND-DSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLLI ++ + FP  Y+PTVF+NY A++ VD + + L LWDTAGQEDYDRLRPLSYP TDV L+CF++++  S EN+  KW PEV H C N PIILVG K DLR D D+  +  + +++ V    G  MA  I A  Y+ECSA T+ G+++VF+
Sbjct:    5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTVERLRERRLQPVSQTQGYVMAKEIKAVKYLECSALTQRGLKQVFD 170

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BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
Match: mig-2 (Rac-like GTPase [Source:UniProtKB/TrEMBL;Acc:G5EBV3])

HSP 1 Score: 186.037 bits (471), Expect = 4.700e-57
Identity = 90/175 (51.43%), Postives = 118/175 (67.43%), Query Frame = 1

Query:  106 MSTSIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRK--DGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            MS+  R+ K V+VGDG  GKTC+LI ++ D FP  YVPTVF+NY A + +D   V L LWDTAGQEDYDRLRPLSYP TDV ++CFS+ S  S +N+  KW PE++  C + P+ILVG K DLR++    +    + K  I K + G  MA +I A  Y+ECSA T+ G+ +VFE
Sbjct:    1 MSSPSRQIKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDLRDEAEPMRALQAEGKSPISKTQ-GMKMAQKIKAVKYLECSALTQQGLTQVFE 174

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BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
Match: cdc-42 (Cell division control protein 42 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q05062])

HSP 1 Score: 181.415 bits (459), Expect = 2.795e-55
Identity = 85/166 (51.20%), Postives = 113/166 (68.07%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSS-RKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLLI ++ ++FP  YVPTVF+NY   + +  +   L L+DTAGQEDYDRLRPLSYP TDV L+CFS+ +  S EN+ EKW PE+ H C   P +LVG + DLR+D     K  KNK + V  + G+ +A  + A  Y+ECSA T+ G++ VF+
Sbjct:    5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDLRDDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQKGLKNVFD 170

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BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
Match: rac-2 (Ras-related protein rac-2 [Source:UniProtKB/Swiss-Prot;Acc:Q94124])

HSP 1 Score: 177.178 bits (448), Expect = 9.936e-54
Identity = 81/166 (48.80%), Postives = 114/166 (68.67%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRND-DSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLL+ ++ + FP  Y+ TVF+ Y  ++ VD + + L+LWDTAGQ+DYD+ R LS+P TDV L+CF++++  S EN+  KW PEV H C N PIILVG K DLR D D+  +  + +++ V    G  MA  I A  Y+ECSA T+ G+++VF+
Sbjct:    5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADLREDRDTIERLRERRLQPVSHTQGYVMAKEIKAVKYLECSALTQIGLKQVFD 170

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BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
Match: Rho1 (gene:FBgn0014020 transcript:FBtr0087212)

HSP 1 Score: 299.671 bits (766), Expect = 1.783e-101
Identity = 144/172 (83.72%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            T+IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND ++ +D  K K E VK ++G+AMA++I A+AY+ECSAK+K+GVR+VFET
Sbjct:    2 TTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFET 173

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BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
Match: Rho1 (gene:FBgn0014020 transcript:FBtr0087213)

HSP 1 Score: 299.671 bits (766), Expect = 1.783e-101
Identity = 144/172 (83.72%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            T+IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND ++ +D  K K E VK ++G+AMA++I A+AY+ECSAK+K+GVR+VFET
Sbjct:    2 TTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFET 173

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BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
Match: Rho1 (gene:FBgn0014020 transcript:FBtr0087216)

HSP 1 Score: 299.671 bits (766), Expect = 1.783e-101
Identity = 144/172 (83.72%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            T+IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND ++ +D  K K E VK ++G+AMA++I A+AY+ECSAK+K+GVR+VFET
Sbjct:    2 TTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFET 173

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BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
Match: Rho1 (gene:FBgn0014020 transcript:FBtr0087214)

HSP 1 Score: 299.671 bits (766), Expect = 1.783e-101
Identity = 144/172 (83.72%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            T+IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND ++ +D  K K E VK ++G+AMA++I A+AY+ECSAK+K+GVR+VFET
Sbjct:    2 TTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFET 173

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BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
Match: Rho1 (gene:FBgn0014020 transcript:FBtr0087211)

HSP 1 Score: 299.671 bits (766), Expect = 1.783e-101
Identity = 144/172 (83.72%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            T+IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND ++ +D  K K E VK ++G+AMA++I A+AY+ECSAK+K+GVR+VFET
Sbjct:    2 TTIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDPNTIRDLAKMKQEPVKPQEGRAMAEKINAFAYLECSAKSKEGVRDVFET 173

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BLAST of Rho-related GTP-binding protein vs. Ensembl Zebrafish
Match: rhoab (ras homolog gene family, member Ab [Source:NCBI gene;Acc:100006041])

HSP 1 Score: 305.064 bits (780), Expect = 1.968e-103
Identity = 148/171 (86.55%), Postives = 158/171 (92.40%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKAEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

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Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKAEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKAEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Zebrafish
Match: rhoac (ras homolog gene family, member Ac [Source:NCBI gene;Acc:406659])

HSP 1 Score: 303.138 bits (775), Expect = 1.353e-102
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI A+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRINAFGYLECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Zebrafish
Match: rhoaa (ras homolog gene family, member Aa [Source:NCBI gene;Acc:406411])

HSP 1 Score: 301.597 bits (771), Expect = 5.886e-102
Identity = 146/171 (85.38%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELQKMKQEPVKPEEGRDMANRINAFGYLECSAKTKEGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
Match: plek (pleckstrin [Source:Xenbase;Acc:XB-GENE-484214])

HSP 1 Score: 304.679 bits (779), Expect = 4.702e-103
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI AY Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKPEEGRDMANRISAYGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
Match: plek (pleckstrin [Source:Xenbase;Acc:XB-GENE-484214])

HSP 1 Score: 304.294 bits (778), Expect = 7.313e-103
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI AY Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKPEEGRDMANRISAYGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
Match: plek (pleckstrin [Source:Xenbase;Acc:XB-GENE-484214])

HSP 1 Score: 303.138 bits (775), Expect = 1.301e-102
Identity = 148/171 (86.55%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI AY Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKPEEGRDMANRISAYGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
Match: cnn3 (calponin 3, acidic [Source:Xenbase;Acc:XB-GENE-951266])

HSP 1 Score: 302.753 bits (774), Expect = 2.853e-102
Identity = 146/171 (85.38%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK EDG+ MA+RI A+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKPEDGREMANRINAFGYLECSAKTKDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
Match: nsd3 (nuclear receptor binding SET domain protein 3 [Source:Xenbase;Acc:XB-GENE-5992933])

HSP 1 Score: 300.442 bits (768), Expect = 2.360e-101
Identity = 144/171 (84.21%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLI+FSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKT DGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIMFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVRAEEGRDMANRISAFGYLECSAKTNDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Mouse
Match: Rhoa (ras homolog family member A [Source:MGI Symbol;Acc:MGI:1096342])

HSP 1 Score: 303.523 bits (776), Expect = 9.342e-103
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Mouse
Match: Rhoc (ras homolog family member C [Source:MGI Symbol;Acc:MGI:106028])

HSP 1 Score: 296.59 bits (758), Expect = 4.637e-100
Identity = 142/171 (83.04%), Postives = 155/171 (90.64%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

[Close]

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

[Close]

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D+ +R++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Mouse
Match: Rhoa (ras homolog family member A [Source:MGI Symbol;Acc:MGI:1096342])

HSP 1 Score: 288.886 bits (738), Expect = 2.358e-97
Identity = 140/164 (85.37%), Postives = 150/164 (91.46%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKD 600
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKD
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKD 165

[Close]

BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
Match: sp|Q6DHM9|RHOAB_DANRE (Rho-related GTP-binding protein RhoA-B OS=Danio rerio OX=7955 GN=rhoab PE=1 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 1.485e-102
Identity = 148/171 (86.55%), Postives = 158/171 (92.40%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELTKMKQEPVKAEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
Match: sp|Q5REY6|RHOA_PONAB (Transforming protein RhoA OS=Pongo abelii OX=9601 GN=RHOA PE=2 SV=2)

HSP 1 Score: 303.523 bits (776), Expect = 5.924e-102
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
Match: sp|P61586|RHOA_HUMAN (Transforming protein RhoA OS=Homo sapiens OX=9606 GN=RHOA PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 5.924e-102
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
Match: sp|P61585|RHOA_BOVIN (Transforming protein RhoA OS=Bos taurus OX=9913 GN=RHOA PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 5.924e-102
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
Match: sp|P61589|RHOA_RAT (Transforming protein RhoA OS=Rattus norvegicus OX=10116 GN=Rhoa PE=1 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 6.535e-102
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. TrEMBL
Match: A0A3P8P756 (Uncharacterized protein OS=Astatotilapia calliptera OX=8154 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.393e-101
Identity = 149/171 (87.13%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD+K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD +R++  K K E VK+EDGK MA+RI AY Y ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDAKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDHTRRELAKMKQEPVKYEDGKEMANRISAYGYQECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. TrEMBL
Match: A0A3B4GB56 (Uncharacterized protein OS=Pundamilia nyererei OX=303518 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.393e-101
Identity = 149/171 (87.13%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD+K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD +R++  K K E VK+EDGK MA+RI AY Y ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDAKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDHTRRELAKMKQEPVKYEDGKEMANRISAYGYQECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. TrEMBL
Match: A0A3Q4N396 (Uncharacterized protein OS=Neolamprologus brichardi OX=32507 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.393e-101
Identity = 149/171 (87.13%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD+K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD +R++  K K E VK+EDGK MA+RI AY Y ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDAKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDHTRRELAKMKQEPVKYEDGKEMANRISAYGYQECSAKTKDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. TrEMBL
Match: G3P6B8 (Uncharacterized protein OS=Gasterosteus aculeatus OX=69293 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.471e-101
Identity = 150/171 (87.72%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD +R++  K K E VKFEDGK MA+RI AY Y ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDHTRRELAKMKQEPVKFEDGKEMANRISAYGYQECSAKTKDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. TrEMBL
Match: A0A1I8IUD2 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005898g1 PE=4 SV=1)

HSP 1 Score: 308.916 bits (790), Expect = 1.676e-101
Identity = 149/172 (86.63%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCF+IDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R +  K + E+VK EDG+AMA+RIGA +YIECSAKTKDGVREVFET
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFAIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEKTRHELAKMRQELVKPEDGRAMAERIGASSYIECSAKTKDGVREVFET 173

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BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
Match: rhoab (rho-related GTP-binding protein RhoA-B [Source:NCBI gene;Acc:103027457])

HSP 1 Score: 306.605 bits (784), Expect = 5.086e-104
Identity = 148/171 (86.55%), Postives = 158/171 (92.40%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSK VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RIGA+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKAEEGRDMANRIGAFGYMECSAKTKDGVREVFE 172

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BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
Match: ENSAMXT00000034694.1 (transforming protein RhoA-like [Source:NCBI gene;Acc:103029431])

HSP 1 Score: 300.056 bits (767), Expect = 1.600e-101
Identity = 146/171 (85.38%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI A+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIYAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
Match: rhoaa (rho-related GTP-binding protein RhoA-A [Source:NCBI gene;Acc:103028705])

HSP 1 Score: 300.056 bits (767), Expect = 1.823e-101
Identity = 146/171 (85.38%), Postives = 155/171 (90.64%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI A  Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKAEEGRDMANRIYAAGYLECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
Match: rhocb (rho-related GTP-binding protein RhoA-D [Source:NCBI gene;Acc:103031338])

HSP 1 Score: 300.056 bits (767), Expect = 1.850e-101
Identity = 144/171 (84.21%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    4 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFE 174

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
Match: rhocb (rho-related GTP-binding protein RhoA-D [Source:NCBI gene;Acc:103031338])

HSP 1 Score: 299.286 bits (765), Expect = 3.075e-101
Identity = 144/171 (84.21%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK E+G+ MA+RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRISAFGYLECSAKTKEGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001838.1 (pep scaffold:Pmarinus_7.0:GL478831:173097:182385:-1 gene:ENSPMAG00000001664.1 transcript:ENSPMAT00000001838.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 303.523 bits (776), Expect = 1.625e-103
Identity = 147/171 (85.96%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+S+R++  K K E VK E+G+ MA+RI A+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDESTRRELAKMKQEPVKSEEGRDMANRINAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004439.1 (pep scaffold:Pmarinus_7.0:GL476335:1598569:1600956:1 gene:ENSPMAG00000004041.1 transcript:ENSPMAT00000004439.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 301.597 bits (771), Expect = 9.688e-103
Identity = 145/171 (84.80%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD+++++  K K E V+ E+G+ MA+RI A+ Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDNTKRELAKMKQEPVRVEEGRDMANRINAFGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002754.1 (pep scaffold:Pmarinus_7.0:GL476453:253767:255265:1 gene:ENSPMAG00000002511.1 transcript:ENSPMAT00000002754.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 274.633 bits (701), Expect = 3.878e-92
Identity = 130/171 (76.02%), Postives = 149/171 (87.13%), Query Frame = 1

Query:  115 SIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            + RKKLV+VGDGACGKTCLL+VFSKD+FP+VYVPTVFE YVADIEVD + VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLEN+PEKW PEV+HFC NVPI+LV NKKDLR D+S  ++  + K E +K EDG+ MA RI A+ Y+ECSA+TKDGVR VFET
Sbjct:    5 TTRKKLVVVGDGACGKTCLLMVFSKDKFPDVYVPTVFETYVADIEVDGRQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENVPEKWVPEVQHFCPNVPIVLVANKKDLRGDESVLQELARIKREPLKPEDGRTMASRIQAFDYVECSAQTKDGVRLVFET 175

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006108.1 (pep scaffold:Pmarinus_7.0:GL480344:135:8553:-1 gene:ENSPMAG00000005525.1 transcript:ENSPMAT00000006108.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 250.366 bits (638), Expect = 1.813e-83
Identity = 118/129 (91.47%), Postives = 124/129 (96.12%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD 498
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+++R++
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDENTRRE 130

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008827.1 (pep scaffold:Pmarinus_7.0:GL480655:11470:16574:-1 gene:ENSPMAG00000007986.1 transcript:ENSPMAT00000008827.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 248.825 bits (634), Expect = 4.035e-82
Identity = 128/176 (72.73%), Postives = 141/176 (80.11%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKS-----VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K      VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNK+DLR+DD++R++  K K   V  +    + + +  +  I  S+     VREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQSVVNQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKRDLRHDDATRRELAKMKQNEVNEKTLDVIQNDVSLFKRIRRSSTL---VREVFE 174

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
Match: RHO1 (GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369])

HSP 1 Score: 259.61 bits (662), Expect = 3.119e-86
Identity = 126/179 (70.39%), Postives = 145/179 (81.01%), Query Frame = 1

Query:  100 QNMSTSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSS----RKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            Q +  SIR+KLVIVGDGACGKTCLLIVFSK QFPEVYVPTVFENYVAD+EVD + VELALWDTAGQEDYDRLRPLSYPD++V+L+CFSID  DSLEN+ EKW  EV HFCQ VPIILVG K DLRND  +    R++G+     V  ++G+++AD+IGA  Y ECSAKT  GVREVFE 
Sbjct:    3 QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQP---VTSQEGQSVADQIGATGYYECSAKTGYGVREVFEA 178

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
Match: RHO3 (Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380])

HSP 1 Score: 197.978 bits (502), Expect = 6.975e-62
Identity = 98/189 (51.85%), Postives = 123/189 (65.08%), Query Frame = 1

Query:  118 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRN---------------DDSSRKDGKNKV-------EIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVF 618
            I +K+VI+GDGACGKT LL VF++  FPEVY PTVFENY+ DI VDSK + L+LWDTAGQE++DRLR LSY DT  I++CFSIDS DSLEN+  KW  E+   C+ V ++LV  K DLRN               D+S   D  N +        ++ +E+G AMA +IGA  Y+ECSAK   GV E F
Sbjct:   15 IERKIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAF 203

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
Match: RHO2 (Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity and in microtubule assembly [Source:SGD;Acc:S000005034])

HSP 1 Score: 186.037 bits (471), Expect = 8.354e-58
Identity = 91/169 (53.85%), Postives = 118/169 (69.82%), Query Frame = 1

Query:  115 SIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            ++R+KLVI+GDGACGKT LL VF+  +FPE Y PTVFENYV D  VD   V L LWDTAGQE+Y+RLRP SY   D+IL+ F++D+ +SL N   KW  E   +C + PI+LVG KKDLR +   +++  +  E+V  ED K +A  IGA  Y+ECSA T +GV +VFE
Sbjct:    5 AVRRKLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATD--EMVPIEDAKQVARAIGAKKYMECSALTGEGVDDVFE 171

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
Match: RHO4 (Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763])

HSP 1 Score: 187.193 bits (474), Expect = 5.061e-57
Identity = 87/167 (52.10%), Postives = 122/167 (73.05%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIE-VDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            K+V+VGDGA GKTCLLI + +  FP  Y+PT+FENYV +IE  + + +ELALWDTAGQE+Y RLRPLSY + DV+++C+S+ S  SL+N+ + W PEVKHFC + PI+LVG K DL   D       N  ++V+    +++A R+GA+A+I+CSA+ K+ + EVFET
Sbjct:   74 KIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEAD-------NLSDLVEPSSAESLAKRLGAFAHIQCSARLKENIDEVFET 233

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
Match: CDC42 (Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219])

HSP 1 Score: 179.104 bits (453), Expect = 3.711e-55
Identity = 85/166 (51.20%), Postives = 112/166 (67.47%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDS-SRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLLI ++ +QFP  YVPTVF+NY   + +  +   L L+DTAGQEDYDRLRPLSYP TDV L+CFS+ S  S EN+ EKW PEV H C  VP ++VG + DLR+D     K  + ++  +  E G  +A  + A  Y+ECSA T+ G++ VF+
Sbjct:    5 KCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFD 170

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
Match: EDO39465 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9Y5])

HSP 1 Score: 305.834 bits (782), Expect = 3.374e-104
Identity = 148/172 (86.05%), Postives = 159/172 (92.44%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR D++++++  K K E VK E+G+AMAD+I AYAY+ECSAKTKDGVREVFET
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRMDENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVFET 173

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
Match: EDO38536 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCK6])

HSP 1 Score: 195.667 bits (496), Expect = 4.667e-61
Identity = 93/166 (56.02%), Postives = 118/166 (71.08%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRND-DSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLLI ++ + FP  Y+PTVF+NY A++ VD K + L LWDTAGQEDYDRLRPLSYP TDV L+CFS+ S  S EN+  KW PEV H C N PI+LVG K DLR+D ++  K  + K+  + +  G  MA  IGA  Y+ECSA T+ G++ VF+
Sbjct:    5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLISPASYENVRAKWYPEVSHHCPNTPIVLVGTKLDLRDDKETIDKLKEKKLGPIGYTQGLQMAKEIGAVKYLECSALTQKGLKTVFD 170

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
Match: EDO35019 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMN7])

HSP 1 Score: 189.119 bits (479), Expect = 1.371e-58
Identity = 90/166 (54.22%), Postives = 113/166 (68.07%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRND-DSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTC+LI ++ + FP  Y+PTVF+NY A++ VD + + L LWDTAGQEDYDRLRPLSYP TDV L+CFS+ S  S EN+  KW PEV H C   PIILVG K DLR D +   K  + K+  +    G  MA  I A  Y+ECSA T+ G++ VF+
Sbjct:    5 KCVVVGDGAVGKTCMLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVISPASFENVRAKWYPEVSHHCPGTPIILVGTKTDLREDKEMIEKLKEKKLNPLSTSHGLQMAKEIKAAKYLECSALTQKGLKTVFD 170

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
Match: EDO37472 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFJ1])

HSP 1 Score: 183.726 bits (465), Expect = 1.844e-56
Identity = 85/166 (51.20%), Postives = 113/166 (68.07%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSS-RKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLLI ++ ++FP  YVPTVF+NY   + +  +   L L+DTAGQEDYDRLRPLSYP TDV L+CFS+ S  S EN+ EKW PE+ H C   P +LVG + DLR+D  +  K  KNK + +  E  + +A  + A  Y+ECSA T+ G++ VF+
Sbjct:    5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQVDLRDDQGTIEKLSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVFD 170

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
Match: EDO42207 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S215])

HSP 1 Score: 150.214 bits (378), Expect = 2.780e-43
Identity = 77/168 (45.83%), Postives = 110/168 (65.48%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKV--EIVKFEDGKAMADRIGAYAYIECSAKTKD-GVREVFE 621
            K+++VGD  CGKT LL  + ++QF E Y  TVF +    +EVD + +EL LWDT+G EDYD +RPLSY + D++L+CF I    + ++I EKW  EV   C N P++LVG K+DLR++ +      +KV  + V   +G+ +ADRI A  YIECS+KT D  + +VFE
Sbjct:   13 KVILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAVEVDGERIELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLCPNKPVLLVGCKQDLRSEVNIVSKLASKVCQQPVTSLEGRKLADRICALDYIECSSKTMDFQLEKVFE 180

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
Match: ENSORLT00000033500.1 (transforming protein RhoA-like [Source:NCBI gene;Acc:101158607])

HSP 1 Score: 305.064 bits (780), Expect = 1.712e-103
Identity = 146/171 (85.38%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            ++IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD + VELALWDTAGQEDYDRLRPLSYPDTDVILMCFS+DS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLR+D+ +R++  K K E VKFEDG+ MA+RI AY Y ECSAKTKDGVREVFE
Sbjct:    2 SAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGRQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRHDEHARRELAKMKQEPVKFEDGREMANRISAYGYQECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
Match: ENSORLT00000023517.2 (transforming protein RhoA [Source:NCBI gene;Acc:101173444])

HSP 1 Score: 303.523 bits (776), Expect = 8.041e-103
Identity = 148/171 (86.55%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK EDG+ MA+RIGA  Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEDGRDMANRIGASGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
Match: ENSORLT00000024724.2 (transforming protein RhoA [Source:NCBI gene;Acc:101173444])

HSP 1 Score: 302.753 bits (774), Expect = 1.391e-102
Identity = 148/171 (86.55%), Postives = 156/171 (91.23%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRND+ +R++  K K E VK EDG+ MA+RIGA  Y+ECSAKTKDGVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEDGRDMANRIGASGYMECSAKTKDGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
Match: rhocb (rho-related GTP-binding protein RhoA-C [Source:NCBI gene;Acc:101155194])

HSP 1 Score: 301.982 bits (772), Expect = 2.579e-102
Identity = 144/171 (84.21%), Postives = 157/171 (91.81%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             ++RKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENY+ADIEVD + VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD +R++ GK K E V+FE+G+ MA RI A+ Y+ECSAKTKDGVR+VFE
Sbjct:    2 AALRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGRQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDHTRRELGKMKQEPVRFEEGRDMASRIDAFGYLECSAKTKDGVRDVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
Match: ENSORLT00000033387.1 (rho-related GTP-binding protein RhoA-B [Source:NCBI gene;Acc:101167618])

HSP 1 Score: 301.212 bits (770), Expect = 5.774e-102
Identity = 146/171 (85.38%), Postives = 155/171 (90.64%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
             +IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS DSLENIPEKWTPEVKHFC NVPIILVGNKKDLRNDD +R++  K K E VK E+G+ MA RI A+ Y+ECSAKTK+GVREVFE
Sbjct:    2 AAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDDHTRRELAKMKQEPVKSEEGRDMAGRIAAFGYMECSAKTKEGVREVFE 172

[Close]

BLAST of Rho-related GTP-binding protein vs. Planmine SMEST
Match: SMESG000022390.1 (SMESG000022390.1)

HSP 1 Score: 357.066 bits (915), Expect = 4.733e-124
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 1

Query:  106 MSTSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            MSTSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET
Sbjct:    1 MSTSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 173

[Close]

BLAST of Rho-related GTP-binding protein vs. Planmine SMEST
Match: SMESG000001635.1 (SMESG000001635.1)

HSP 1 Score: 297.745 bits (761), Expect = 9.997e-101
Identity = 144/172 (83.72%), Postives = 156/172 (90.70%), Query Frame = 1

Query:  112 TSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKD-GKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVFET 624
            ++IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD+K VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDS+DSLENI EKW PEVKHFC NVPIILVGNKKDLRND+ +R +  K + E+VK+EDG   AD+I A  Y+ECSAKTKDGVREVFET
Sbjct:    2 SAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDNKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSTDSLENIVEKWYPEVKHFCPNVPIILVGNKKDLRNDERARHELAKMRQELVKYEDGLLTADKINAVKYLECSAKTKDGVREVFET 173

[Close]

BLAST of Rho-related GTP-binding protein vs. Planmine SMEST
Match: SMESG000024961.1 (SMESG000024961.1)

HSP 1 Score: 197.978 bits (502), Expect = 9.113e-62
Identity = 92/166 (55.42%), Postives = 119/166 (71.69%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEI-VKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTCLLI ++ + FP  Y+PTVF+NY A++ VD+K V L LWDTAGQEDYDRLRPLSYP TDV L+CFS+ +S S EN+  KW PE+ H C N PIILVG K DLR +  + + GK++    + +  G  +A  IGA  Y+ECSA T+ G++ VF+
Sbjct:    5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDNKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLINSSSYENVRAKWYPEITHHCPNTPIILVGTKLDLRENHMNGEAGKDRRNTPISYPQGLVLAKEIGAVKYLECSALTQKGLKSVFD 170

[Close]

BLAST of Rho-related GTP-binding protein vs. Planmine SMEST
Match: SMESG000068769.1 (SMESG000068769.1)

HSP 1 Score: 191.815 bits (486), Expect = 1.540e-59
Identity = 89/167 (53.29%), Postives = 116/167 (69.46%), Query Frame = 1

Query:  118 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADRIGAYAYIECSAKTKDGVREVF 618
            I+KKLVI+GDG  GKT LL+V+  ++FPE YVPTVFE Y   ++ ++K + L LWDTAGQEDYDRLRPLSY + DV+L+C++IDS DS+ N+ EKW PE  HFC   PI+LVG K DLRN  +      N  + V   +GK +A +I A  + ECSAK    V+E+F
Sbjct:    2 IKKKLVIIGDGGAGKTSLLMVYKDNEFPEYYVPTVFETYAIPVQWNNKEISLELWDTAGQEDYDRLRPLSYSNADVVLICYNIDSKDSIINVKEKWAPEANHFCNGAPIVLVGTKMDLRNQTN------NSDQFVSRNEGKLLAQQIKAGDFFECSAKENANVQEIF 162

[Close]

BLAST of Rho-related GTP-binding protein vs. Planmine SMEST
Match: SMESG000005010.1 (SMESG000005010.1)

HSP 1 Score: 192.2 bits (487), Expect = 1.801e-59
Identity = 88/167 (52.69%), Postives = 119/167 (71.26%), Query Frame = 1

Query:  127 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDSKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKWTPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEI--VKFEDGKAMADRIGAYAYIECSAKTKDGVREVFE 621
            K V+VGDGA GKTC+LI ++ D FP  +VPTVF+N  A++ ++   + L LWDTAGQE+YDRLRPLSYP+TDV L+CFS+ + DS  N+ EKW  EV HF +  PIILVG K DLR + +  ++ KN++    V ++ G A+   IGA  YIECSA+T+  +R+VFE
Sbjct:    5 KCVVVGDGAVGKTCILISYTTDAFPTTHVPTVFDNMSANVMIEGTPINLGLWDTAGQEEYDRLRPLSYPETDVFLICFSLVNKDSFANVKEKWYKEVSHFSKETPIILVGTKLDLREERALNENDKNQIRSSPVTYQQGLALCQEIGAVKYIECSARTQVNLRQVFE 171

The following BLAST results are available for this feature:

BLAST of Rho-related GTP-binding protein vs. Ensembl Human
BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
BLAST of Rho-related GTP-binding protein vs. Ensembl Zebrafish
BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
BLAST of Rho-related GTP-binding protein vs. Ensembl Mouse
BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
BLAST of Rho-related GTP-binding protein vs. TrEMBL
BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
BLAST of Rho-related GTP-binding protein vs. Planmine SMEST

BLAST of Rho-related GTP-binding protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RHOA	1.234e-102	85.96	ras homolog family member A [Source:HGNC Symbol;Ac...	[more]
RHOC	2.511e-100	83.04	ras homolog family member C [Source:HGNC Symbol;Ac...	[more]
RHOC	6.754e-100	83.04	ras homolog family member C [Source:HGNC Symbol;Ac...	[more]
RHOC	6.754e-100	83.04	ras homolog family member C [Source:HGNC Symbol;Ac...	[more]
RHOC	6.754e-100	83.04	ras homolog family member C [Source:HGNC Symbol;Ac...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rho-1	7.560e-100	83.04	Ras-like GTP-binding protein rhoA [Source:UniProt...	[more]
ced-10	1.009e-60	54.22	Ras-related protein ced-10 [Source:UniProtKB/Swis...	[more]
mig-2	4.700e-57	51.43	Rac-like GTPase [Source:UniProtKB/TrEMBL;Acc:G5EB...	[more]
cdc-42	2.795e-55	51.20	Cell division control protein 42 homolog [Source:...	[more]
rac-2	9.936e-54	48.80	Ras-related protein rac-2 [Source:UniProtKB/Swiss...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rho1	1.783e-101	83.72	gene:FBgn0014020 transcript:FBtr0087212	[more]
Rho1	1.783e-101	83.72	gene:FBgn0014020 transcript:FBtr0087213	[more]
Rho1	1.783e-101	83.72	gene:FBgn0014020 transcript:FBtr0087216	[more]
Rho1	1.783e-101	83.72	gene:FBgn0014020 transcript:FBtr0087214	[more]
Rho1	1.783e-101	83.72	gene:FBgn0014020 transcript:FBtr0087211	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rhoab	1.968e-103	86.55	ras homolog gene family, member Ab [Source:NCBI ge...	[more]
rhoab	1.968e-103	86.55	ras homolog gene family, member Ab [Source:NCBI ge...	[more]
rhoab	1.968e-103	86.55	ras homolog gene family, member Ab [Source:NCBI ge...	[more]
rhoac	1.353e-102	85.96	ras homolog gene family, member Ac [Source:NCBI ge...	[more]
rhoaa	5.886e-102	85.38	ras homolog gene family, member Aa [Source:NCBI ge...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
plek	4.702e-103	86.55	pleckstrin [Source:Xenbase;Acc:XB-GENE-484214]	[more]
plek	7.313e-103	86.55	pleckstrin [Source:Xenbase;Acc:XB-GENE-484214]	[more]
plek	1.301e-102	86.55	pleckstrin [Source:Xenbase;Acc:XB-GENE-484214]	[more]
cnn3	2.853e-102	85.38	calponin 3, acidic [Source:Xenbase;Acc:XB-GENE-951...	[more]
nsd3	2.360e-101	84.21	nuclear receptor binding SET domain protein 3 [Sou...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rhoa	9.342e-103	85.96	ras homolog family member A [Source:MGI Symbol;Acc...	[more]
Rhoc	4.637e-100	83.04	ras homolog family member C [Source:MGI Symbol;Acc...	[more]
Rhoc	4.637e-100	83.04	ras homolog family member C [Source:MGI Symbol;Acc...	[more]
Rhoc	4.637e-100	83.04	ras homolog family member C [Source:MGI Symbol;Acc...	[more]
Rhoa	2.358e-97	85.37	ras homolog family member A [Source:MGI Symbol;Acc...	[more]

BLAST of Rho-related GTP-binding protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q6DHM9\|RHOAB_DANRE	1.485e-102	86.55	Rho-related GTP-binding protein RhoA-B OS=Danio re...	[more]
sp\|Q5REY6\|RHOA_PONAB	5.924e-102	85.96	Transforming protein RhoA OS=Pongo abelii OX=9601 ...	[more]
sp\|P61586\|RHOA_HUMAN	5.924e-102	85.96	Transforming protein RhoA OS=Homo sapiens OX=9606 ...	[more]
sp\|P61585\|RHOA_BOVIN	5.924e-102	85.96	Transforming protein RhoA OS=Bos taurus OX=9913 GN...	[more]
sp\|P61589\|RHOA_RAT	6.535e-102	85.96	Transforming protein RhoA OS=Rattus norvegicus OX=...	[more]

BLAST of Rho-related GTP-binding protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A3P8P756	1.393e-101	87.13	Uncharacterized protein OS=Astatotilapia callipter...	[more]
A0A3B4GB56	1.393e-101	87.13	Uncharacterized protein OS=Pundamilia nyererei OX=...	[more]
A0A3Q4N396	1.393e-101	87.13	Uncharacterized protein OS=Neolamprologus brichard...	[more]
G3P6B8	1.471e-101	87.72	Uncharacterized protein OS=Gasterosteus aculeatus ...	[more]
A0A1I8IUD2	1.676e-101	86.63	Uncharacterized protein OS=Macrostomum lignano OX=...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rhoab	5.086e-104	86.55	rho-related GTP-binding protein RhoA-B [Source:NCB...	[more]
ENSAMXT00000034694.1	1.600e-101	85.38	transforming protein RhoA-like [Source:NCBI gene;A...	[more]
rhoaa	1.823e-101	85.38	rho-related GTP-binding protein RhoA-A [Source:NCB...	[more]
rhocb	1.850e-101	84.21	rho-related GTP-binding protein RhoA-D [Source:NCB...	[more]
rhocb	3.075e-101	84.21	rho-related GTP-binding protein RhoA-D [Source:NCB...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSPMAT00000001838.1	1.625e-103	85.96	pep scaffold:Pmarinus_7.0:GL478831:173097:182385:-...	[more]
ENSPMAT00000004439.1	9.688e-103	84.80	pep scaffold:Pmarinus_7.0:GL476335:1598569:1600956...	[more]
ENSPMAT00000002754.1	3.878e-92	76.02	pep scaffold:Pmarinus_7.0:GL476453:253767:255265:1...	[more]
ENSPMAT00000006108.1	1.813e-83	91.47	pep scaffold:Pmarinus_7.0:GL480344:135:8553:-1 gen...	[more]
ENSPMAT00000008827.1	4.035e-82	72.73	pep scaffold:Pmarinus_7.0:GL480655:11470:16574:-1 ...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RHO1	3.119e-86	70.39	GTP-binding protein of the rho subfamily of Ras-li...	[more]
RHO3	6.975e-62	51.85	Non-essential small GTPase of the Rho/Rac family o...	[more]
RHO2	8.354e-58	53.85	Non-essential small GTPase of the Rho/Rac family o...	[more]
RHO4	5.061e-57	52.10	Non-essential small GTPase; member of the Rho/Rac ...	[more]
CDC42	3.711e-55	51.20	Small rho-like GTPase; essential for establishment...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO39465	3.374e-104	86.05	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO38536	4.667e-61	56.02	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO35019	1.371e-58	54.22	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37472	1.844e-56	51.20	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO42207	2.780e-43	45.83	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Rho-related GTP-binding protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000033500.1	1.712e-103	85.38	transforming protein RhoA-like [Source:NCBI gene;A...	[more]
ENSORLT00000023517.2	8.041e-103	86.55	transforming protein RhoA [Source:NCBI gene;Acc:10...	[more]
ENSORLT00000024724.2	1.391e-102	86.55	transforming protein RhoA [Source:NCBI gene;Acc:10...	[more]
rhocb	2.579e-102	84.21	rho-related GTP-binding protein RhoA-C [Source:NCB...	[more]
ENSORLT00000033387.1	5.774e-102	85.38	rho-related GTP-binding protein RhoA-B [Source:NCB...	[more]

BLAST of Rho-related GTP-binding protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000022390.1	4.733e-124	100.00	SMESG000022390.1	[more]
SMESG000001635.1	9.997e-101	83.72	SMESG000001635.1	[more]
SMESG000024961.1	9.113e-62	55.42	SMESG000024961.1	[more]
SMESG000068769.1	1.540e-59	53.29	SMESG000068769.1	[more]
SMESG000005010.1	1.801e-59	52.69	SMESG000005010.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30026534 ID=SMED30026534|Name=Rho-related GTP-binding protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1215bp
AAAATATATCTTTATTGAACATAAATATTTACTATCAACAATTTCACTTA
TTTATAGTATCTTTTTACATATTAAAGGAAGTTATCTTAAAAAGTTTTTC
AAAACATGTCAACATCTATTAGAAAGAAACTTGTAATTGTTGGTGACGGT
GCATGTGGTAAAACATGCCTTTTAATTGTATTCAGCAAAGATCAGTTTCC
TGAAGTTTATGTTCCTACAGTGTTTGAAAATTACGTAGCTGATATTGAAG
TGGATTCAAAATCTGTTGAATTAGCTTTGTGGGATACAGCTGGACAGGAA
GATTATGACAGATTAAGACCGTTATCATATCCAGATACTGATGTTATATT
AATGTGCTTTAGCATCGATTCCTCAGACAGTCTTGAAAACATTCCAGAGA
AGTGGACACCGGAAGTTAAACATTTTTGTCAAAACGTTCCTATTATTCTG
GTTGGTAATAAAAAGGATCTTCGTAATGATGACAGTAGTCGCAAAGACGG
CAAAAACAAAGTCGAAATTGTAAAATTTGAAGACGGAAAAGCAATGGCAG
ACCGAATCGGTGCCTATGCTTACATTGAATGTTCTGCGAAAACAAAGGAC
GGAGTTCGAGAAGTTTTCGAGACTGCAACTAAAGCAGCTCTACAATCTAA
GAAAAAGAAGAAAAATATTAAATGTGATTTATTATAAAAGAATGATTTAA
TGAAGTTCTGACATTTAATAAATTAAAGTATTCGAATTTATCTAAGTCGA
AGCTATGTGAGTTTAAATTTGAATCATTCCTGGTTTCTTTTTTACTTTTA
TATTGAATAAATTCTGATGTTATTGCTTAATAAAATTTGAATCACTAATT
TGCATGTCATTTAAAATTTCCTAGCATAATTTGGTCTTTATTCATTCCAA
TGTCTATTCTGTGTTTTCTAGACAATATTGAATATTTGTAACATCGATTT
CGAAATGTTGAATTTTTTTGATAATTTAAATTATTTGTTAAGTATTTTTG
ATTTATTATTAGTAATTAGTTTAGGAATTCGATTATAGTATTAATCATGC
TAATTGATTGGTTTTTGCGAACAATTATTATCTCTCAATTGATTAATACA
ACACTATTGAGATAATTGATTTGCATGCATTTTCTAGTAATCGGAATTTG
ATCAAATGTTAATATTATCACAATAGATATTTCAATTACGATTCTATTTT
GTTATTCAAGCGAGG

protein sequence of SMED30026534-orf-1

>SMED30026534-orf-1 ID=SMED30026534-orf-1|Name=SMED30026534-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=194bp
MSTSIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVD
SKSVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSSDSLENIPEKW
TPEVKHFCQNVPIILVGNKKDLRNDDSSRKDGKNKVEIVKFEDGKAMADR
IGAYAYIECSAKTKDGVREVFETATKAALQSKKKKKNIKCDLL*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **molecular function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding
GO:0000166	nucleotide binding

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000020	protonephridia
PLANA:0000026	gut
PLANA:0000034	epidermis
PLANA:0000070	intestinal phagocyte
PLANA:0000099	neuron
PLANA:0002032	epidermal cell
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR003578	Small_GTPase_Rho
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase

Vocabulary: **biological process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction
GO:0007266	Rho protein signal transduction
GO:0016055	Wnt signaling pathway
GO:0032956	regulation of actin cytoskeleton organization
GO:0035023	regulation of Rho protein signal transduction
GO:0036342	post-anal tail morphogenesis
GO:0040001	establishment of mitotic spindle localization
GO:0042074	cell migration involved in gastrulation
GO:0043066	negative regulation of apoptotic process
GO:0044319	wound healing, spreading of cells
GO:0048840	otolith development
GO:1902766	skeletal muscle satellite cell migration

Vocabulary: **cellular component**
Term	Definition
GO:0005622	intracellular
GO:0005886	plasma membrane
GO:0016020	membrane

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 156..178 score: 36.44 coord: 7..28 score: 47.14 coord: 30..46 score: 28.5 coord: 47..69 score: 47.33 coord: 109..122 score: 58.47
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 8..181 e-value: 4.9E-24 score: 95.9
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 12..193 e-value: 0.0076 score: -7.4
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 8..181 e-value: 1.8E-20 score: 84.0
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 9..181 e-value: 2.7E-118 score: 409.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 3..193 e-value: 1.1E-67 score: 229.1
None	No IPR available	PANTHER	PTHR24072	RHO FAMILY GTPASE	coord: 4..193
None	No IPR available	PANTHER	PTHR24072:SF100	RHO-RELATED GTP-BINDING PROTEIN RHOC	coord: 4..193
None	No IPR available	CDD	cd01870	RhoA_like	coord: 6..179 e-value: 5.13959E-126 score: 350.19
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 6..171 e-value: 1.0E-40 score: 137.2
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 8..179 e-value: 5.3E-58 score: 195.2
IPR003578	Small GTPase Rho	PROSITE	PS51420	RHO	coord: 1..178 score: 26.727
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..179