SMED30026517

Overview
NameSMED30026517
Smed IDSMED30026517
Length (bp)1532
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30026517 (SMED30026517) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30026517 (SMED30026517) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30026517 (SMED30026517) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30026517 (SMED30026517) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30026517

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30026517SMESG000054758.1 SMESG000004218.1 SmedASXL_015519SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
pharynxSMED30026517SMESG000054758.1 SMESG000004218.1 dd_Smed_v4_8963_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30026517SMESG000054758.1 SMESG000004218.1 dd_Smed_v4_8963_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30026517SMESG000054758.1 SMESG000004218.1 dd_Smed_v4_8963_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30026517SMESG000054758.1 SMESG000004218.1 dd_Smed_v6_8963_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
epidermisSMED30026517SMESG000054758.1 SMESG000004218.1 dd_Smed_v4_8963_0_1dd_Smed_v4PMID:28292427
Wurtzel et al., 2017		whole organism asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30026517 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.003506:65609..70445 +7292
Homology
[Close]
BLAST of SMED30026517 vs. Ensembl Human
Match: FAM227B (family with sequence similarity 227 member B [Source:HGNC Symbol;Acc:HGNC:26543])

HSP 1 Score: 107.457 bits (267), Expect = 2.585e-24
Identity = 75/268 (27.99%), Postives = 124/268 (46.27%), Query Frame = 2 
Query:  458 KSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQS-----------------EIFNN--------ETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNI 1186
            K+++   + GF   E  +LP  +D   I   ++K   F ++  ++W   F SE SIALLHD FWW FL  FR       E++   F+RI+ ++  L MS+     + F   YPD LA  +YA F+ +FP S  LF  +FK+ L N   +W +G++P    + +W + +        S  A  +  ++                  +I NN          +   L++ A     ++TG      F+ VLF+    SPLI  +L+++ +
Sbjct:  144 KNIEGCSFTGFKANELTQLPRHLDAEQIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFWWWFLHKFRPD----RENQDCLFDRISESYVTLFMSIPLSRKDAFFQIYPDCLAQAIYATFHEAFPESSYLFNDEFKEDLGNNIFLWCSGLKPQKGFWIHWKLKELSTTTIHGSKKAPAKSVKERIADSQEHISTSIDFNIIKILNNPRAYTLPISKEESRLSRLATKSHYSSTGP----EFNRVLFNFGGQSPLILYYLKMHEL 403
[Close]
BLAST of SMED30026517 vs. Ensembl Human
Match: FAM227B (family with sequence similarity 227 member B [Source:HGNC Symbol;Acc:HGNC:26543])

HSP 1 Score: 84.3445 bits (207), Expect = 2.263e-17
Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 2 
Query:  458 KSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNE 1039
            K+++   + GF   E  +LP  +D   I   ++K   F ++  ++W   F SE SIALLHD FWW FL  FR+                                      YPD LA  +YA F+ +FP S  LF  +FK+ L N   +W +G++P    + +W + +        S  A P +S +  I +++
Sbjct:  144 KNIEGCSFTGFKANELTQLPRHLDAEQIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFWWWFLHKFRI--------------------------------------YPDCLAQAIYATFHEAFPESSYLFNDEFKEDLGNNIFLWCSGLKPQKGFWIHWKLKELSTTTIHGSKKA-PAKSVKERIADSQ 298
[Close]
BLAST of SMED30026517 vs. Ensembl Human
Match: FAM227A (family with sequence similarity 227 member A [Source:HGNC Symbol;Acc:HGNC:44197])

HSP 1 Score: 74.3294 bits (181), Expect = 1.962e-13
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 2 
Query:  464 VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVK---FGKQF--RRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSY-PDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNW 949
             + Y Y  F+  + N+LP  VD   ++  VV+  +    GK F   R   K  SS    A+  D FWW F + ++   E+    +   F+RIA ++ LL+  V    + + L+   P +L+  +Y  F   FP S      +FK  + NT  +WI+G  P P S+ +W
Sbjct:  133 AELYQYSNFNSSKPNKLPNGVDFCDMVGNVVRAERDCLSGKHFCSGRELEKFLSSSSPRAIWLDSFWWIFHERYQPNKEL----QNNLFDRIAQHYALLLFRVPKSHSEEALLKRLPSLLSKAVYTSFCCCFPQSW-FDTHEFKSDICNTMSLWISGTYPSPQSYDSW 295
[Close]
BLAST of SMED30026517 vs. Ensembl Human
Match: FAM227A (family with sequence similarity 227 member A [Source:HGNC Symbol;Acc:HGNC:44197])

HSP 1 Score: 74.3294 bits (181), Expect = 1.995e-13
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 2 
Query:  464 VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVK---FGKQF--RRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSY-PDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNW 949
             + Y Y  F+  + N+LP  VD   ++  VV+  +    GK F   R   K  SS    A+  D FWW F + ++   E+    +   F+RIA ++ LL+  V    + + L+   P +L+  +Y  F   FP S      +FK  + NT  +WI+G  P P S+ +W
Sbjct:  133 AELYQYSNFNSSKPNKLPNGVDFCDMVGNVVRAERDCLSGKHFCSGRELEKFLSSSSPRAIWLDSFWWIFHERYQPNKEL----QNNLFDRIAQHYALLLFRVPKSHSEEALLKRLPSLLSKAVYTSFCCCFPQSW-FDTHEFKSDICNTMSLWISGTYPSPQSYDSW 295
[Close]
BLAST of SMED30026517 vs. Ensembl Human
Match: FAM227A (family with sequence similarity 227 member A [Source:HGNC Symbol;Acc:HGNC:44197])

HSP 1 Score: 74.3294 bits (181), Expect = 2.047e-13
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 2 
Query:  464 VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVK---FGKQF--RRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSY-PDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNW 949
             + Y Y  F+  + N+LP  VD   ++  VV+  +    GK F   R   K  SS    A+  D FWW F + ++   E+    +   F+RIA ++ LL+  V    + + L+   P +L+  +Y  F   FP S      +FK  + NT  +WI+G  P P S+ +W
Sbjct:  133 AELYQYSNFNSSKPNKLPNGVDFCDMVGNVVRAERDCLSGKHFCSGRELEKFLSSSSPRAIWLDSFWWIFHERYQPNKEL----QNNLFDRIAQHYALLLFRVPKSHSEEALLKRLPSLLSKAVYTSFCCCFPQSW-FDTHEFKSDICNTMSLWISGTYPSPQSYDSW 295
[Close]
BLAST of SMED30026517 vs. Ensembl Xenopus
Match: ENSXETT00000055522.1 (family with sequence similarity 227 member B [Source:NCBI gene;Acc:101733874])

HSP 1 Score: 100.908 bits (250), Expect = 1.849e-22
Identity = 74/273 (27.11%), Postives = 128/273 (46.89%), Query Frame = 2 
Query:  488 FDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNW--------TINDDQFQMFLASGN---ASPQQSRQSEI-FNNE---TQNKELTKSALPKLKNTTG-----LPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPL 1246
            F   E  +LPG V+   I+ LV K         +   K F SE S+A+L D FWW     F+        D+   F+RI+ +F  L  SV   + + F   YPD L+  ++A+FY +FP SR LF   FK  +++    W++G++P P S+ +W         +N D+    L   +    S Q++ + ++ FN +    + +E   S++ ++K+        +     F  VLF     SPLI+ +L+++ +   +    +  V  +E+  L
Sbjct:  136 FKSNECIKLPGCVEAAQILNLVTKAQNIKGDNLKAMKKFFLSEASVAVLQDSFWWFLCQQFKPDHA----DQNYLFDRISASFTNLFWSVPHNVKDFFFKIYPDCLSQAIFAVFYEAFPESRVLFNDKFKSEVMDLIFQWVSGVKPAPCSWAHWDLSLLERTNLNVDKIHNNLTKNDETHKSLQKNGEWQLNFNLDDLIQKARETYHSSVHEVKDVHATESHCIGPGPEFHHVLFKLGGHSPLISNYLKMHKLPGCEEEGQNHKVKHVEISQL 404
[Close]
BLAST of SMED30026517 vs. Ensembl Xenopus
Match: ENSXETT00000000957.1 (family with sequence similarity 227 member A [Source:NCBI gene;Acc:100495201])

HSP 1 Score: 78.5666 bits (192), Expect = 6.267e-15
Identity = 75/310 (24.19%), Postives = 138/310 (44.52%), Query Frame = 2 
Query:  314 KIKTDQEIVDEM---FKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLP-GSVDPLFIMRLVVKRVKFG------KQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNF-GLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSS-RRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNETQNK----ELTKSALPKL-KNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEP 1192
            KI+++Q+++++    ++ L +   +    +  K+L + P            + V+ Y + G  +     LP G      I R+V      G      K+ RR      SS  +  ++ D FWW +L  ++   E     + + F+R+A N+  LL ++ +      FL  +P VL+  +Y+ F  SFP S  R    DF+ +L N    WI GI P P  +  W  +  + ++ +  G    +Q + S+I N E + +      T++ + ++ K +        F+  LF  +  SPL+  +LQ  N +P
Sbjct:   95 KIESEQKVLEKFTHRYEHLFLEHHQETQDIGKKMLKSTP------------RMVELYQFSGRSDAGPTPLPYGIALDTIIDRVVSAHENTGGKICSPKEVRRN----LSSLVTKEMILDCFWWIYLHKYKPDTEC----QKQLFDRVAENYIKLLGVTFDQHHGEAFLKVFPSVLSQAIYSSFCFSFPQSLYRFQTDDFRTQLCNLLWQWIGGISPSPGCYKTWDFHILEPEVDMVHG----KQKQVSDIINGEGKTQGGFVTSTQTRIHRVTKESHPACCGPAFTHKLFSLSGHSPLVQYYLQENNSKP 380
[Close]
BLAST of SMED30026517 vs. Ensembl Mouse
Match: Fam227b (family with sequence similarity 227, member B [Source:MGI Symbol;Acc:MGI:1923073])

HSP 1 Score: 107.842 bits (268), Expect = 1.622e-24
Identity = 107/408 (26.23%), Postives = 178/408 (43.63%), Query Frame = 2 
Query:   50 DLPLNYDEYIKYMNIHEWP-------GKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMFKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNET-------QNKELTKS----ALPKLKNTTGLPISFT-----------FSTVLFDPNACSPLINKFLQIYNI 1186
            D P ++DE++K  N   WP         +  +T+  L+E  +       I   L  N+   +D +D L   + + +  L  +A+ + +  K+++KK         + F K     K+IA         +  +E + +IE              F++ E  +LP  +D   I   V+K   F ++  +VW     S+ SIALLHD FWW FL  F+        D+   F+RIA ++  L + +     + F   YPD L   +Y  F  SFP S  LF   FK+ L NT  +W++G++P    +T+W + D        S    P + R+S I + E        + +++ K+    A+PKL   +    + T           F  VLFD    SPLI  +L+++ +
Sbjct:   11 DPPRSFDEFLKSQNWDYWPRDVHFRDSDIWEDTLKKLEEAIS----YTSIYSYLWTNVPRLYDIVDSLESKLKESSHLLQHHASRLFESDKMISKKRSYTNLERYKAFVKEHYRPKKIAL--------SDRMETEKNIEGCTF---------LFNQNEVTQLPRHLDAKQIYLYVLKTHNFEEKVFKVWKTHVLSDCSIALLHDSFWWWFLHKFKPD----KRDEDFLFDRIAESYVTLFIKIPLRRKDAFFKMYPDCLTQAVYTTFQESFPESCSLFNDKFKEDLGNTIFLWLSGLKPETGFWTHWKLQDLCTTTIHGSRRV-PVKLRRSVIPSQEHIPGIRDLKIEDILKNPRAYAMPKLMKESVASKAATKPSHYRSLGPEFHKVLFDFGGQSPLILYYLKMHEL 392
[Close]
BLAST of SMED30026517 vs. Ensembl Mouse
Match: Fam227b (family with sequence similarity 227, member B [Source:MGI Symbol;Acc:MGI:1923073])

HSP 1 Score: 107.842 bits (268), Expect = 1.762e-24
Identity = 119/486 (24.49%), Postives = 210/486 (43.21%), Query Frame = 2 
Query:   50 DLPLNYDEYIKYMNIHEWP-------GKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMFKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNET-------QNKELTKS----ALPKLKNTTGLPISFT-----------FSTVLFDPNACSPLINKFLQIY---NIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQ 1411
            D P ++DE++K  N   WP         +  +T+  L+E  +       I   L  N+   +D +D L   + + +  L  +A+ + +  K+++KK         + F K     K+IA         +  +E + +IE              F++ E  +LP  +D   I   V+K   F ++  +VW     S+ SIALLHD FWW FL  F+        D+   F+RIA ++  L + +     + F   YPD L   +Y  F  SFP S  LF   FK+ L NT  +W++G++P    +T+W + D        S    P + R+S I + E        + +++ K+    A+PKL   +    + T           F  VLFD    SPLI  +L+++    I  + +   +KF   L       S   T  + +++ ++   + + +   +    +  +K L +Q+E ++K  + +Q
Sbjct:   11 DPPRSFDEFLKSQNWDYWPRDVHFRDSDIWEDTLKKLEEAIS----YTSIYSYLWTNVPRLYDIVDSLESKLKESSHLLQHHASRLFESDKMISKKRSYTNLERYKAFVKEHYRPKKIAL--------SDRMETEKNIEGCTF---------LFNQNEVTQLPRHLDAKQIYLYVLKTHNFEEKVFKVWKTHVLSDCSIALLHDSFWWWFLHKFKPD----KRDEDFLFDRIAESYVTLFIKIPLRRKDAFFKMYPDCLTQAVYTTFQESFPESCSLFNDKFKEDLGNTIFLWLSGLKPETGFWTHWKLQDLCTTTIHGSRRV-PVKLRRSVIPSQEHIPGIRDLKIEDILKNPRAYAMPKLMKESVASKAATKPSHYRSLGPEFHKVLFDFGGQSPLILYYLKMHELGGISVTHNPKGTKFTKILR----EPSPAPTYCDIIRDAKRKFADNKKDFKRVKQRIKDDIKFLREQQELIDKELDRIQ 466
[Close]
BLAST of SMED30026517 vs. Ensembl Mouse
Match: Fam227b (family with sequence similarity 227, member B [Source:MGI Symbol;Acc:MGI:1923073])

HSP 1 Score: 107.842 bits (268), Expect = 1.762e-24
Identity = 119/486 (24.49%), Postives = 210/486 (43.21%), Query Frame = 2 
Query:   50 DLPLNYDEYIKYMNIHEWP-------GKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMFKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNET-------QNKELTKS----ALPKLKNTTGLPISFT-----------FSTVLFDPNACSPLINKFLQIY---NIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQ 1411
            D P ++DE++K  N   WP         +  +T+  L+E  +       I   L  N+   +D +D L   + + +  L  +A+ + +  K+++KK         + F K     K+IA         +  +E + +IE              F++ E  +LP  +D   I   V+K   F ++  +VW     S+ SIALLHD FWW FL  F+        D+   F+RIA ++  L + +     + F   YPD L   +Y  F  SFP S  LF   FK+ L NT  +W++G++P    +T+W + D        S    P + R+S I + E        + +++ K+    A+PKL   +    + T           F  VLFD    SPLI  +L+++    I  + +   +KF   L       S   T  + +++ ++   + + +   +    +  +K L +Q+E ++K  + +Q
Sbjct:   11 DPPRSFDEFLKSQNWDYWPRDVHFRDSDIWEDTLKKLEEAIS----YTSIYSYLWTNVPRLYDIVDSLESKLKESSHLLQHHASRLFESDKMISKKRSYTNLERYKAFVKEHYRPKKIAL--------SDRMETEKNIEGCTF---------LFNQNEVTQLPRHLDAKQIYLYVLKTHNFEEKVFKVWKTHVLSDCSIALLHDSFWWWFLHKFKPD----KRDEDFLFDRIAESYVTLFIKIPLRRKDAFFKMYPDCLTQAVYTTFQESFPESCSLFNDKFKEDLGNTIFLWLSGLKPETGFWTHWKLQDLCTTTIHGSRRV-PVKLRRSVIPSQEHIPGIRDLKIEDILKNPRAYAMPKLMKESVASKAATKPSHYRSLGPEFHKVLFDFGGQSPLILYYLKMHELGGISVTHNPKGTKFTKILR----EPSPAPTYCDIIRDAKRKFADNKKDFKRVKQRIKDDIKFLREQQELIDKELDRIQ 466
[Close]
BLAST of SMED30026517 vs. Ensembl Mouse
Match: Fam227a (family with sequence similarity 227, member A [Source:MGI Symbol;Acc:MGI:1922979])

HSP 1 Score: 63.5438 bits (153), Expect = 3.199e-10
Identity = 49/169 (28.99%), Postives = 78/169 (46.15%), Query Frame = 2 
Query:  464 VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVK---FGKQF--RRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFG-LLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGP-DFKQRLVNTCHVWITGIQPFPNSFTNW 949
             + + +  FDE + N+LP  VD   ++  V++  K    GK +   R   K   S +  A+  D FWW F + ++   EI    + K F+RIA N+  LL            L     +L+  +Y  F   FP S   F   +FK  + NT ++W++G+ P   S+ NW
Sbjct:  132 AELHEHPPFDEMKPNKLPNGVDFCDMVGNVIRSEKNPLSGKSYCSDRELEKFLCSPFLAAMWLDSFWWLFHERYQPDKEI----QKKLFDRIARNYASLLFKMCRSHYEEALLKRLSSLLSKAMYTSFCCCFPQS--WFNTHEFKSEICNTMNLWVSGMYPCLQSYNNW 294
[Close]
BLAST of SMED30026517 vs. Ensembl Mouse
Match: Fam227a (family with sequence similarity 227, member A [Source:MGI Symbol;Acc:MGI:1922979])

HSP 1 Score: 63.5438 bits (153), Expect = 3.199e-10
Identity = 49/169 (28.99%), Postives = 78/169 (46.15%), Query Frame = 2 
Query:  464 VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVK---FGKQF--RRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFG-LLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGP-DFKQRLVNTCHVWITGIQPFPNSFTNW 949
             + + +  FDE + N+LP  VD   ++  V++  K    GK +   R   K   S +  A+  D FWW F + ++   EI    + K F+RIA N+  LL            L     +L+  +Y  F   FP S   F   +FK  + NT ++W++G+ P   S+ NW
Sbjct:  132 AELHEHPPFDEMKPNKLPNGVDFCDMVGNVIRSEKNPLSGKSYCSDRELEKFLCSPFLAAMWLDSFWWLFHERYQPDKEI----QKKLFDRIARNYASLLFKMCRSHYEEALLKRLSSLLSKAMYTSFCCCFPQS--WFNTHEFKSEICNTMNLWVSGMYPCLQSYNNW 294
[Close]
BLAST of SMED30026517 vs. UniProt/SwissProt
Match: sp|Q4R7D5|F227B_MACFA (Protein FAM227B OS=Macaca fascicularis OX=9541 GN=FAM227B PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.777e-25
Identity = 64/194 (32.99%), Postives = 102/194 (52.58%), Query Frame = 2 
Query:  458 KSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNE 1039
            K+++   + GF   E  +LP  +D   I   ++K   F ++  ++W   F SE SIALLHD FWW FL  FR       E++   F+RI+ ++  L MS+     + F   YPD LA  +YA F+ +FP S  LF  +FK+ L NT  +W +G++P    +T+W + +        S  A P +S +  I +++
Sbjct:  144 KNIEGCSFTGFKANELTKLPRHLDAERIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFWWWFLHKFRPD----RENQDCLFDRISESYVTLFMSIPLSRKDAFFQIYPDCLAQAIYATFHEAFPESSYLFNDEFKEDLGNTIFLWCSGLKPQKGFWTHWKLKELSTTTIHGSKKA-PAKSVKERIADSQ 332
[Close]
BLAST of SMED30026517 vs. UniProt/SwissProt
Match: sp|Q6AXP3|F227B_RAT (Protein FAM227B OS=Rattus norvegicus OX=10116 GN=Fam227b PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 9.788e-25
Identity = 115/484 (23.76%), Postives = 208/484 (42.98%), Query Frame = 2 
Query:   56 PLNYDEYIKYMNIHEWP-------GKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMFKKLD---VNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNTTGLPI-------------------SFTFSTVLFDPNACSPLINKFLQIY---NIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQ 1411
            P +++E++K  N   WP       G +   T+  L+E  +       +   L  N+   ++ +D +   + + +  L ++A+ + +  +L++KK           +  LD     +KE   +   KI+ +  +E + +IE                + E  +LP  +D   I   V++     ++  +VW     S+ SIALLHD FWW FL  F+        D+   F+RIA ++  L M +     + F   YPD LA  +Y  F  SFP S  LF  +FK+ L NT  +W++G++P P  +T+W +  D     +      P + R+  + + E  +  +       LKN   LP+                      F  VLFD    SPLI  +L+++    I  + +   SKF   L   P + +      E +K+ ++   + + +   +    +  +K L +Q+E+++K  + LQ
Sbjct:   13 PKSFEEFLKSQNWDYWPRDVHIRDGDIWENTLRKLEEAVS----YNSVYSYLWTNVPRLYEIVDSMESKLKECSHLLQQHASRLFESDRLISKK---------RTYTNLDRYKAFLKEHYRR--KKIVLSDQMETEKNIEGCTFL---------LKQNELTQLPRHLDAKQIYLYVLRTHNLEEKVFKVWKTHILSDCSIALLHDCFWWWFLHKFKPD----KRDQDWLFDRIAESYVTLFMRIPLRRKDIFFQMYPDWLAQAVYTTFQESFPESCSLFNDNFKEDLGNTIFLWLSGLKPAPGFWTHWKLQ-DLCTTTIHGCRRVPVKLRRGIMSSQEHTSATVGLKIEDILKNPRALPVLKEESAASKVTTKSHYRSLGPEFYKVLFDFGGQSPLILYYLKMHELGGISVTYNPKGSKFTKILREPPPAPTYC----EIIKDAKRKFADNKKDFKRVKQRIKDDIKFLKEQQEQIDKELDRLQ 463
[Close]
BLAST of SMED30026517 vs. UniProt/SwissProt
Match: sp|Q9D518|F227B_MOUSE (Protein FAM227B OS=Mus musculus OX=10090 GN=Fam227b PE=2 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 1.233e-23
Identity = 119/486 (24.49%), Postives = 210/486 (43.21%), Query Frame = 2 
Query:   50 DLPLNYDEYIKYMNIHEWP-------GKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMFKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNET-------QNKELTKS----ALPKLKNTTGLPISFT-----------FSTVLFDPNACSPLINKFLQIY---NIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQ 1411
            D P ++DE++K  N   WP         +  +T+  L+E  +       I   L  N+   +D +D L   + + +  L  +A+ + +  K+++KK         + F K     K+IA         +  +E + +IE              F++ E  +LP  +D   I   V+K   F ++  +VW     S+ SIALLHD FWW FL  F+        D+   F+RIA ++  L + +     + F   YPD L   +Y  F  SFP S  LF   FK+ L NT  +W++G++P    +T+W + D        S    P + R+S I + E        + +++ K+    A+PKL   +    + T           F  VLFD    SPLI  +L+++    I  + +   +KF   L       S   T  + +++ ++   + + +   +    +  +K L +Q+E ++K  + +Q
Sbjct:   11 DPPRSFDEFLKSQNWDYWPRDVHFRDSDIWEDTLKKLEEAIS----YTSIYSYLWTNVPRLYDIVDSLESKLKESSHLLQHHASRLFESDKMISKKRSYTNLERYKAFVKEHYRPKKIAL--------SDRMETEKNIEGCTF---------LFNQNEVTQLPRHLDAKQIYLYVLKTHNFEEKVFKVWKTHVLSDCSIALLHDSFWWWFLHKFKPD----KRDEDFLFDRIAESYVTLFIKIPLRRKDAFFKMYPDCLTQAVYTTFQESFPESCSLFNDKFKEDLGNTIFLWLSGLKPETGFWTHWKLQDLCTTTIHGSRRV-PVKLRRSVIPSQEHIPGIRDLKIEDILKNPRAYAMPKLMKESVASKAATKPSHYRSLGPEFHKVLFDFGGQSPLILYYLKMHELGGISVTHNPKGTKFTKILR----EPSPAPTYCDIIRDAKRKFADNKKDFKRVKQRIKDDIKFLREQQELIDKELDRIQ 466
[Close]
BLAST of SMED30026517 vs. UniProt/SwissProt
Match: sp|Q96M60|F227B_HUMAN (Protein FAM227B OS=Homo sapiens OX=9606 GN=FAM227B PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.241e-23
Identity = 75/268 (27.99%), Postives = 124/268 (46.27%), Query Frame = 2 
Query:  458 KSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQS-----------------EIFNN--------ETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNI 1186
            K+++   + GF   E  +LP  +D   I   ++K   F ++  ++W   F SE SIALLHD FWW FL  FR       E++   F+RI+ ++  L MS+     + F   YPD LA  +YA F+ +FP S  LF  +FK+ L N   +W +G++P    + +W + +        S  A  +  ++                  +I NN          +   L++ A     ++TG      F+ VLF+    SPLI  +L+++ +
Sbjct:  144 KNIEGCSFTGFKANELTQLPRHLDAEQIYLFILKAHNFDERVFKIWKTHFLSEASIALLHDSFWWWFLHKFRPD----RENQDCLFDRISESYVTLFMSIPLSRKDAFFQIYPDCLAQAIYATFHEAFPESSYLFNDEFKEDLGNNIFLWCSGLKPQKGFWIHWKLKELSTTTIHGSKKAPAKSVKERIADSQEHISTSIDFNIIKILNNPRAYTLPISKEESRLSRLATKSHYSSTGP----EFNRVLFNFGGQSPLILYYLKMHEL 403
[Close]
BLAST of SMED30026517 vs. UniProt/SwissProt
Match: sp|F5H4B4|F227A_HUMAN (Protein FAM227A OS=Homo sapiens OX=9606 GN=FAM227A PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.582e-13
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 2 
Query:  464 VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVK---FGKQF--RRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSY-PDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNW 949
             + Y Y  F+  + N+LP  VD   ++  VV+  +    GK F   R   K  SS    A+  D FWW F + ++   E+    +   F+RIA ++ LL+  V    + + L+   P +L+  +Y  F   FP S      +FK  + NT  +WI+G  P P S+ +W
Sbjct:  133 AELYQYSNFNSSKPNKLPNGVDFCDMVGNVVRAERDCLSGKHFCSGRELEKFLSSSSPRAIWLDSFWWIFHERYQPNKEL----QNNLFDRIAQHYALLLFRVPKSHSEEALLKRLPSLLSKAVYTSFCCCFPQSW-FDTHEFKSDICNTMSLWISGTYPSPQSYDSW 295
[Close]
BLAST of SMED30026517 vs. TrEMBL
Match: A0A1S3HVB0 (protein FAM227B isoform X2 OS=Lingula unguis OX=7574 GN=LOC106158487 PE=4 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 2.332e-34
Identity = 91/300 (30.33%), Postives = 149/300 (49.67%), Query Frame = 2 
Query:   56 PLNYDEYIKYMNIHEWPGKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMFKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTI 955
            P  Y+EY+K   + EWP +LTSE  L L+EE       E+I   L++   I    LD L   +L     L  YA+ I+      +++ +       + F  L    +  A K+ +     K  ++   +     K V+F  + GF + E   LP  ++   I+  V K   F + F+++W K+F SE S+AL+ D FWW F++ +        +D+   F+RIA +F  L  S+  ++ +KF   YP+ LA  +Y+ F  +FP S+  F   FKQ L+NT + W+TG++P P +   W +
Sbjct:   38 PKTYEEYVKLYGLKEWPERLTSEGPLHLQEEGGFLGGQEDIYNLLKEEAPIDMTLLDDLEDRLLDLERKLRHYADQIITEETRSSRRAENLFYAPPKAF--LTQMAESDAVKIHHSSKAKKSKDLAEVMLETRKKGVEFCTFPGFRKGELTELPAQLETPQILHRVTKAQDFNRGFKKMWKKVFLSEASVALMQDTFWWFFINKYEKSKHSSEQDQ--LFDRIADSFVALFSSIHPDVKDKFFQVYPEALAQAIYSAFLEAFPESKVQFHDGFKQELLNTTYEWMTGVKPVPGTHKQWNL 333
[Close]
BLAST of SMED30026517 vs. TrEMBL
Match: A0A1S3HV88 (protein FAM227B isoform X1 OS=Lingula unguis OX=7574 GN=LOC106158487 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.169e-33
Identity = 91/311 (29.26%), Postives = 152/311 (48.87%), Query Frame = 2 
Query:   56 PLNYDEYIKYMNIHEWPGKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKT-----DQEIVDEMFKKLDVNVKEIATKVTN------KILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTI 955
            P  Y+EY+K   + EWP +LTSE  L L+EE       E+I   L++   I    LD L   +L     L  YA+ I+      +++ +       +  + +M +   V +   +    +      K    KP ++   +     K V+F  + GF + E   LP  ++   I+  V K   F + F+++W K+F SE S+AL+ D FWW F++ +        +D+   F+RIA +F  L  S+  ++ +KF   YP+ LA  +Y+ F  +FP S+  F   FKQ L+NT + W+TG++P P +   W +
Sbjct:   38 PKTYEEYVKLYGLKEWPERLTSEGPLHLQEEGGFLGGQEDIYNLLKEEAPIDMTLLDDLEDRLLDLERKLRHYADQIITEETRSSRRAENLFYAPPKAFLTQMAESDAVKIHHSSKAKKSKKLLAMKFATWKPGDLAEVMLETRKKGVEFCTFPGFRKGELTELPAQLETPQILHRVTKAQDFNRGFKKMWKKVFLSEASVALMQDTFWWFFINKYEKSKHSSEQDQ--LFDRIADSFVALFSSIHPDVKDKFFQVYPEALAQAIYSAFLEAFPESKVQFHDGFKQELLNTTYEWMTGVKPVPGTHKQWNL 346
[Close]
BLAST of SMED30026517 vs. TrEMBL
Match: A0A1S3JN75 (protein FAM227B OS=Lingula unguis OX=7574 GN=LOC106174695 PE=4 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 1.215e-33
Identity = 91/311 (29.26%), Postives = 152/311 (48.87%), Query Frame = 2 
Query:   56 PLNYDEYIKYMNIHEWPGKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKT-----DQEIVDEMFKKLDVNVKEIATKVTN------KILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTI 955
            P  Y+EY+K   + EWP +LTSE  L L+EE       E+I   L++   I    LD L   +L     L  YA+ I+      +++ +       +  + +M +   V +   +    +      K    KP ++   +     K V+F  + GF + E   LP  ++   I+  V K   F + F+++W K+F SE S+AL+ D FWW F++ +        +D+   F+RIA +F  L  S+  ++ +KF   YP+ LA  +Y+ F  +FP S+  F   FKQ L+NT + W+TG++P P +   W +
Sbjct:   38 PKTYEEYVKLYGLKEWPERLTSEGPLHLQEEGGFLGGQEDIYNLLKEEAPIDMTLLDDLEDRLLDLERKLRHYADQIITEETRSSRRAENLFYAPPKTFLTQMAESDAVKIHHSSKAKKSKKLLAMKFATWKPGDLAEVMLETRKKGVEFCTFPGFRKGELTELPAQLETPQILHRVTKAQDFNRGFKKMWKKVFLSEASVALMQDTFWWFFINKYEKSKHSSEQDQ--LFDRIADSFVALFSSIHPDVKDKFFQVYPEALAQAIYSAFLEAFPESKVQFHDGFKQELLNTTYEWMTGVKPVPGTHKQWNL 346
[Close]
BLAST of SMED30026517 vs. TrEMBL
Match: A0A210Q320 (Coiled-coil domain-containing protein 87 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT15511 PE=4 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.877e-31
Identity = 94/305 (30.82%), Postives = 154/305 (50.49%), Query Frame = 2 
Query:   56 PLNYDEYIKYMNIHEWPGKLTSETILPLKEEFNEFQNVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNKKIKTDQEIVDEMF----KKLDVNVKEI-ATKVTNKILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTI 955
            P  ++E++K   + EWP +LTSE  L L+ E     + EEI   L+++  +  ++L++L L + +    L  Y++ I+        + K D    D +F    K     + E  A K  +     K ++   S+     KS+++  + GF   E   LPG ++   I+  V K   F   F++ W K+F SE S+A++ D FWW FL  +   D    ED    F+RIA +F  L  S+  ++ +KFL  YPD LA  ++  ++ +FP SR      FKQ L+NT   WITG++P P+ + +W +
Sbjct:   71 PKTFEEFMKVEGLTEWPQRLTSEGALDLEGEILLLGSQEEIADLLRESAPLGLNKLEELELRLDELEGKLHFYSDQIV-------SEAKQDTHGQDRLFFSPSKTFLTEMSESDAVKSHHSARGHKTMDFAESMMETRKKSLEYCQFPGFRVGELIELPGQMESPPILHRVTKAQDFNPGFKKFWKKLFLSEASVAMMQDTFWWFFLSKY---DPNRQEDLDLLFDRIADSFVGLFTSIHTDVKDKFLAVYPDCLAQAVFMAYWEAFPESRTKMDEQFKQDLINTVVEWITGLRPMPSVYKSWNV 365
[Close]
BLAST of SMED30026517 vs. TrEMBL
Match: F7BI27 (Family with sequence similarity 227 member B OS=Equus caballus OX=9796 GN=FAM227B PE=4 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 2.273e-30
Identity = 106/363 (29.20%), Postives = 174/363 (47.93%), Query Frame = 2 
Query:  401 KILDAKPVEMKNSIEALNLKSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTIN--------------DDQFQMFLASGNASPQQS---RQSEIFNNETQNKELTKSALPKLKN-TTGLPISFT---FSTVLFDPNACSPLINKFLQIYNIE-----PSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQ 1411
            KI+ +  +E K +IE  N        + GF   E  +LP  +D   I   ++K   F ++  ++W   F SE SIALLHD FWW FL  F+       E++   F+RI+ ++  L MS+     + F   YPD LA  +YA F  +FP S  LF  +FKQ L N   +W++G++P    +T+W +N               D  +  +A        S     +EI  N      LT    P+L + TT    S +   F+ VLF+    SPLI  +L+++ +      P Q+ I  KF   L   P + +     KE  +++ K++ + ++E + I+    +++KLL +++E ++K  + LQ
Sbjct:  115 KIMLSAEMETKKNIEGCN--------FSGFKTNELTQLPRHLDAERIYLYILKAHNFDEKVFKIWKTYFLSEASIALLHDCFWWWFLHKFKPN----RENQDSLFDRISESYVTLFMSIPLSRKDAFFQVYPDCLAQAIYAAFQEAFPESSNLFNDEFKQDLGNNIFLWLSGLKPHKGFWTHWKLNKLATTTIHGTKKIPSDAVKDCIARSQERITASIDFNMAEILKNPRAYTLLTSKEEPRLSSLTTKSHYSSSGPEFNRVLFNFGGQSPLILYYLKMHELNGISKIPRQTKI--KFTEILREPPPAPTYRDIIKEAKRQFAKNQKDLRMEKHRIS----EEIKLLRQRQERIDKELDRLQ 459
[Close]
BLAST of SMED30026517 vs. Ensembl Nematostella
Match: EDO47949 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RKR0])

HSP 1 Score: 76.2554 bits (186), Expect = 7.932e-15
Identity = 40/130 (30.77%), Postives = 68/130 (52.31%), Query Frame = 2 
Query:  581 FRRVWWKIFSSEYSIALLHDLFWWTFLDAF---RVGDEIIAEDKGKYFERIALNF-GLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTIN 958
            +++    +  S  S A+L D+FWW FL+ +   R   E++       F RIA N+  LL  +   E  + F   YPD++   +Y  F  +FP+S + F   FK+ LV   ++W+ G++P P S+  W ++
Sbjct:   41 YKKYLHSLLLSHMSQAVLQDVFWWYFLERYQSDRSTQELL-------FNRIAHNYVKLLFNAPITEYRDAFFKRYPDLVNQAVYCTFCTAFPTSYKQFDGKFKEGLVQLVYMWMVGVKPVPRSWERWKLD 163
[Close]
BLAST of SMED30026517 vs. Ensembl Nematostella
Match: EDO46128 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RR91])

HSP 1 Score: 67.3958 bits (163), Expect = 4.762e-14
Identity = 35/79 (44.30%), Postives = 43/79 (54.43%), Query Frame = 2 
Query:  713 FERIALNFGLLVMSVEDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNW 949
            F RIA +F  L  SV  +  + F   YPD LA  LYA +   FP S  LF  DFK  L+N  + WITG +P P S+  W
Sbjct:    2 FSRIADSFVALFFSVPGDYKDNFFKYYPDCLAQALYASYCDVFPRSYNLFDDDFKTDLMNGVYEWITGTRPPPRSWQKW 80
[Close]
BLAST of SMED30026517 vs. Planmine SMEST
Match: SMESG000054758.1 (SMESG000054758.1)

HSP 1 Score: 470.7 bits (1210), Expect = 2.518e-164
Identity = 226/230 (98.26%), Postives = 226/230 (98.26%), Query Frame = 2 
Query:  788 SYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF 1477
            SYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQP PNSFTNWTINDDQ QMF ASGNASPQQSRQSEIFNNETQNKELTKSALPKLKN TGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF
Sbjct:  153 SYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPLPNSFTNWTINDDQLQMFSASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNKTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF 382
[Close]
BLAST of SMED30026517 vs. Planmine SMEST
Match: SMESG000054758.1 (SMESG000054758.1)

HSP 1 Score: 466.463 bits (1199), Expect = 6.294e-164
Identity = 223/240 (92.92%), Postives = 228/240 (95.00%), Query Frame = 2 
Query:  758 EDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF 1477
            +  + ++ +    DVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQP PNSFTNWTINDDQ QMF ASGNASPQQSRQSEIFNNETQNKELTKSALPKLKN TGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF
Sbjct:   58 DQRVGSRLVSVSGDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPLPNSFTNWTINDDQLQMFSASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNKTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF 297
[Close]
BLAST of SMED30026517 vs. Planmine SMEST
Match: SMESG000004218.1 (SMESG000004218.1)

HSP 1 Score: 466.077 bits (1198), Expect = 9.223e-164
Identity = 223/240 (92.92%), Postives = 228/240 (95.00%), Query Frame = 2 
Query:  758 EDEIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF 1477
            +  + ++ +    DVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQP PNSFTNWTINDDQ QMF ASGNASPQQSRQSEIFNNETQNKELTKSALPKLKN TGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF
Sbjct:   58 DQRVGSRLVSVSGDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPLPNSFTNWTINDDQLQMFSASGNASPQQSRQSEIFNNETQNKELTKSALPKLKNKTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKLLAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF 297
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BLAST of SMED30026517 vs. Planmine SMEST
Match: SMESG000046302.1 (SMESG000046302.1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.448e-13
Identity = 69/276 (25.00%), Postives = 123/276 (44.57%), Query Frame = 2 
Query:  458 KSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLV--VKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDE---IANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSR---------QSEIFNNETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDP 1243
            K ++   + GF+ ++   LP SV P FI++ V   + + F K ++  + K F  +    LL+D+FW+ F+  +  G ++  +D   YF R + ++   +  +  E      KF    P++L+  LY      FP S   F  DF + ++     W++GI+P   S++ W + + +        NA  +Q R         +     ++ +N   TKS L    N +        + VLF+ +  SPLI  + +  NI  +    TS  V   E+ P
Sbjct:  137 KLIELCQHPGFNWQKITELPFSVQPEFILKRVHESQPLTFIKIYKEFFDKWFYCQKIQDLLNDMFWYIFISKY--GSDVDKKDLSNYFSRASESYVGFLFKITMEKPYYQEKFKKVLPNLLSQALYVALSECFPDSWIQFNNDFVENIIQLVFFWLSGIRPTKGSWSCWNMEELKPTEQKLKENAIEEQLRIGFSDLQIEKKTPEKDQLKNSVSTKSTLLGALNHS--------NNVLFNVSGHSPLIQWYFKKNNININVG--TSNLVKHKEILP 400
[Close]
BLAST of SMED30026517 vs. Planmine SMEST
Match: SMESG000046302.1 (SMESG000046302.1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.088e-13
Identity = 69/276 (25.00%), Postives = 123/276 (44.57%), Query Frame = 2 
Query:  458 KSVDFYPYVGFDEEEHNRLPGSVDPLFIMRLV--VKRVKFGKQFRRVWWKIFSSEYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVEDE---IANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWITGIQPFPNSFTNWTINDDQFQMFLASGNASPQQSR---------QSEIFNNETQNKELTKSALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITSKFVNRLELDP 1243
            K ++   + GF+ ++   LP SV P FI++ V   + + F K ++  + K F  +    LL+D+FW+ F+  +  G ++  +D   YF R + ++   +  +  E      KF    P++L+  LY      FP S   F  DF + ++     W++GI+P   S++ W + + +        NA  +Q R         +     ++ +N   TKS L    N +        + VLF+ +  SPLI  + +  NI  +    TS  V   E+ P
Sbjct:  147 KLIELCQHPGFNWQKITELPFSVQPEFILKRVHESQPLTFIKIYKEFFDKWFYCQKIQDLLNDMFWYIFISKY--GSDVDKKDLSNYFSRASESYVGFLFKITMEKPYYQEKFKKVLPNLLSQALYVALSECFPDSWIQFNNDFVENIIQLVFFWLSGIRPTKGSWSCWNMEELKPTEQKLKENAIEEQLRIGFSDLQIEKKTPEKDQLKNSVSTKSTLLGALNHS--------NNVLFNVSGHSPLIQWYFKKNNININVG--TSNLVKHKEILP 410
The following BLAST results are available for this feature:
BLAST of SMED30026517 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
FAM227B2.585e-2427.99family with sequence similarity 227 member B [Sour... [more]
FAM227B2.263e-1727.84family with sequence similarity 227 member B [Sour... [more]
FAM227A1.962e-1329.76family with sequence similarity 227 member A [Sour... [more]
FAM227A1.995e-1329.76family with sequence similarity 227 member A [Sour... [more]
FAM227A2.047e-1329.76family with sequence similarity 227 member A [Sour... [more]
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BLAST of SMED30026517 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ENSXETT00000055522.11.849e-2227.11family with sequence similarity 227 member B [Sour... [more]
ENSXETT00000000957.16.267e-1524.19family with sequence similarity 227 member A [Sour... [more]
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BLAST of SMED30026517 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Fam227b1.622e-2426.23family with sequence similarity 227, member B [Sou... [more]
Fam227b1.762e-2424.49family with sequence similarity 227, member B [Sou... [more]
Fam227b1.762e-2424.49family with sequence similarity 227, member B [Sou... [more]
Fam227a3.199e-1028.99family with sequence similarity 227, member A [Sou... [more]
Fam227a3.199e-1028.99family with sequence similarity 227, member A [Sou... [more]
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BLAST of SMED30026517 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q4R7D5|F227B_MACFA5.777e-2532.99Protein FAM227B OS=Macaca fascicularis OX=9541 GN=... [more]
sp|Q6AXP3|F227B_RAT9.788e-2523.76Protein FAM227B OS=Rattus norvegicus OX=10116 GN=F... [more]
sp|Q9D518|F227B_MOUSE1.233e-2324.49Protein FAM227B OS=Mus musculus OX=10090 GN=Fam227... [more]
sp|Q96M60|F227B_HUMAN1.241e-2327.99Protein FAM227B OS=Homo sapiens OX=9606 GN=FAM227B... [more]
sp|F5H4B4|F227A_HUMAN9.582e-1329.76Protein FAM227A OS=Homo sapiens OX=9606 GN=FAM227A... [more]
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BLAST of SMED30026517 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1S3HVB02.332e-3430.33protein FAM227B isoform X2 OS=Lingula unguis OX=75... [more]
A0A1S3HV881.169e-3329.26protein FAM227B isoform X1 OS=Lingula unguis OX=75... [more]
A0A1S3JN751.215e-3329.26protein FAM227B OS=Lingula unguis OX=7574 GN=LOC10... [more]
A0A210Q3204.877e-3130.82Coiled-coil domain-containing protein 87 OS=Mizuho... [more]
F7BI272.273e-3029.20Family with sequence similarity 227 member B OS=Eq... [more]
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BLAST of SMED30026517 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO479497.932e-1530.77Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO461284.762e-1444.30Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30026517 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30026517 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000054758.12.518e-16498.26SMESG000054758.1[more]
SMESG000054758.16.294e-16492.92SMESG000054758.1[more]
SMESG000004218.19.223e-16492.92SMESG000004218.1[more]
SMESG000046302.11.448e-1325.00SMESG000046302.1[more]
SMESG000046302.12.088e-1325.00SMESG000046302.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30026517 ID=SMED30026517|Name=SMED30026517|organism=Schmidtea mediterranea sexual|type=transcript|length=1532bp
GTAATATTAAAAAATGACTGATTTCTATAATTCTAACAATTTATTTTCAG
ATCTACCATTGAACTATGATGAATACATTAAATATATGAACATACATGAA
TGGCCTGGTAAACTTACATCTGAAACTATTTTACCTTTAAAAGAAGAATT
CAATGAATTTCAAAATGTTGAAGAAATAGAAATAGAATTACAAAAGAATA
TTATAATCAGTTTTGATCAGTTAGATAAATTGAATCTAGACGTGTTAAAA
CACAACGACTATTTACTGAGATACGCTAATTCAATTTTGGATGTCTCAAA
ATTATTAAATAAGAAAATAAAAACAGATCAGGAAATAGTTGATGAAATGT
TTAAAAAATTAGATGTGAATGTGAAGGAGATAGCCACTAAAGTGACCAAT
AAAATTCTGGATGCTAAACCTGTGGAAATGAAAAATTCAATTGAGGCGTT
AAATTTGAAGTCTGTAGATTTCTATCCGTACGTCGGATTTGATGAAGAGG
AGCATAATAGGCTCCCTGGTAGCGTTGATCCGTTATTCATAATGCGACTT
GTTGTAAAACGCGTGAAATTTGGGAAGCAATTTAGACGAGTCTGGTGGAA
GATATTTTCATCGGAATATTCTATTGCTCTCCTGCATGATCTGTTTTGGT
GGACTTTTTTGGACGCATTTAGGGTTGGGGATGAAATAATTGCCGAGGAT
AAAGGGAAATATTTTGAACGAATCGCTCTCAATTTCGGATTGCTAGTAAT
GAGTGTAGAAGATGAAATCGCAAACAAATTTCTCGTTTCATATCCAGACG
TGCTGGCCATGACCTTATATGCGTTATTCTATCATTCATTCCCATCCTCT
AGGCGACTGTTCGGGCCAGATTTCAAGCAGCGATTGGTCAACACTTGTCA
TGTGTGGATAACTGGCATCCAGCCCTTTCCAAACTCTTTTACCAATTGGA
CAATTAATGATGACCAGTTCCAAATGTTTTTGGCTTCTGGAAACGCTTCT
CCTCAGCAATCTCGTCAGTCAGAAATTTTCAATAATGAAACACAAAACAA
GGAATTGACAAAATCGGCATTGCCAAAACTGAAGAATACAACCGGTCTGC
CAATTTCTTTCACCTTTTCGACGGTTTTATTTGATCCTAACGCATGCTCA
CCGCTGATAAATAAATTTCTACAGATTTACAATATTGAGCCATCACAAAG
CTCGATAACCTCAAAATTTGTCAATAGATTGGAGCTTGATCCTCTTAGCC
AATCAGTCACATTGACATGCAAGGAGCAGTTAAAGGAATATAGGAAACAC
AGATTAGAGCGACAATTGGAACACAATAACATCACTATAGAAAATGAAAA
ACAGATGAAATTGTTAGCAAAACAGCGAGAGGAGCTAGAGAAGCGATTTG
AAAATTTGCAGAAGGAAATTGATGGATGCTCAAATGTTTTAGATAAGCGG
AAAGCCATGCAAGATTTTGTGAATTTTTGATGTTTTCAGTTAATCAAATT
TTTTAGTTTTATTATTACTATTATTATCATTA
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protein sequence of SMED30026517-orf-1

>SMED30026517-orf-1 ID=SMED30026517-orf-1|Name=SMED30026517-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=489bp
MTDFYNSNNLFSDLPLNYDEYIKYMNIHEWPGKLTSETILPLKEEFNEFQ
NVEEIEIELQKNIIISFDQLDKLNLDVLKHNDYLLRYANSILDVSKLLNK
KIKTDQEIVDEMFKKLDVNVKEIATKVTNKILDAKPVEMKNSIEALNLKS
VDFYPYVGFDEEEHNRLPGSVDPLFIMRLVVKRVKFGKQFRRVWWKIFSS
EYSIALLHDLFWWTFLDAFRVGDEIIAEDKGKYFERIALNFGLLVMSVED
EIANKFLVSYPDVLAMTLYALFYHSFPSSRRLFGPDFKQRLVNTCHVWIT
GIQPFPNSFTNWTINDDQFQMFLASGNASPQQSRQSEIFNNETQNKELTK
SALPKLKNTTGLPISFTFSTVLFDPNACSPLINKFLQIYNIEPSQSSITS
KFVNRLELDPLSQSVTLTCKEQLKEYRKHRLERQLEHNNITIENEKQMKL
LAKQREELEKRFENLQKEIDGCSNVLDKRKAMQDFVNF*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
PLANA:0000034epidermis
PLANA:0000099neuron
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR029417FAM227
Vocabulary: molecular function
TermDefinition
GO:0003674molecular_function
Vocabulary: cellular component
TermDefinition
GO:0005575cellular_component
Vocabulary: biological process
TermDefinition
GO:0008150biological_process
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 428..475
NoneNo IPR availablePANTHERPTHR33560:SF2PROTEIN FAM227Bcoord: 15..467
IPR029417FAM227 ProteinPFAMPF14922FWWhcoord: 165..312
e-value: 1.1E-36
score: 125.9
IPR029417FAM227 ProteinPANTHERPTHR33560FAMILY NOT NAMEDcoord: 15..467