SMED30026417
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30026417 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 5
Homology
BLAST of SMED30026417 vs. TrEMBL
Match: A0A355ABF2 (Uncharacterized protein OS=Flavobacteriaceae bacterium OX=1871037 GN=DDZ39_05755 PE=4 SV=1) HSP 1 Score: 243.047 bits (619), Expect = 1.394e-95 Identity = 135/416 (32.45%), Postives = 225/416 (54.09%), Query Frame = -2 Query: 2336 KGMNAIITTILT*VMCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAIKKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSET----ETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEK 3571 K N +I +L + + + YDC+N K+G ++SL + EEC A P + ++ + Y++YQE I + +ECTVTR+ C +HS S II+ + + + CE F IR+A ++ + A+ G + + G I A DG+CEGGEY + ++ LVIE+YQ+ ++K + FDP+T + C A C G ++I+Y + C L LK+ FD ++G++ + N++ + + +T I S TP + + ++ +R ++ V KC + + NY I +S + + KI K++ L +Y NNK D+LYH L E +Y ++I NDC LNREIL+TK+A+ +TNP+ A P++PL +G F R++GEV+ T+KC++ Sbjct: 371 KVFNFVILMLL--LFSLPKGKAIKAYDCDNAKLGTQFSLLDAEECPEAYPNQFEKRFNRI-YHIYQERGLIYSAAKECTVTRRRSIRWCGHHSHSAIIKQPSMIEYLNIGHRNCEDAFRLKEIRLADKLILKAKPGILIQEDIIKVGSI-AFDGTCEGGEYWYQGKKIKQALVIETYQITIKKSEVAFDPDTNEMMSRSYCSAKSNFCFDGKTSIIYDIRKQECNLVFLKTVNFDVIRGKIFDNNLFIDKLNSRPKKIYRTEKT-----------INSHITPVVLIANKTSDAIRLVRKDQVVKCGQSVYLTNYDRIVVSTVRVKEAIIKISKKEINLAVYFNNKADYLYHHQLRQIEDLYREMIINDCKLNREILRTKMALIVTNPNIAAPVIPLGKGVFSRVLGEVLQTFKCKQ 771 HSP 2 Score: 140.198 bits (352), Expect = 1.394e-95 Identity = 82/234 (35.04%), Postives = 136/234 (58.12%), Query Frame = -1 Query: 1656 RKVTGKLKIPSD-----KCINKGKIRFAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPV-DISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNFGEKPNYELLLSPDHFQHATANMMKAMWGRFLIFGQMMAXXXXXXXXXXXXXXXLTQMLAYFDIYKRERKINWKMTLGFLPFLAKTMV---LHGHSKDIHK 2330 ++V K+ I SD I K K + +PVTR++ P CS ++ P ++ D +W+ P+ +AP + F LT L + +F + D+ +SG+Y K +E AR++LL+P + + IV + G+ G +PNYELLLSP+HF+ A N+MK +WGRFLIFGQ +A ++GI ++ ++ + Q+ + +++YK +WK+ LG +P LA+ + LH D+ K Sbjct: 770 KQVEVKINISSDCTHELPVIYKNKFMYLEPVTRLLLPDVIKVKKIKCSPLFSPAYKLSDNTWIVTPSLTPIAPPKRFQLTNLRNAVKFSRLKDLMKSGLYDKKAMEDARKYLLYPQVRDRILTEIVETSLGD--GNRPNYELLLSPNHFEKAAKNVMKKVWGRFLIFGQAIAGLMGIYYVVIFLKTFIEQVTSTYELYKI-MGFSWKLILGIIPCLARPFISKKLHDKINDVEK 1000
BLAST of SMED30026417 vs. TrEMBL
Match: A0A232EWL2 (Uncharacterized protein OS=Trichomalopsis sarcophagae OX=543379 GN=TSAR_006613 PE=4 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 1.241e-16 Identity = 47/149 (31.54%), Postives = 68/149 (45.64%), Query Frame = -1 Query: 1833 FAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQF---PTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNF-GEKPNYELLLSPDHFQHATANMMKAMWGRFLIFGQMMA 2267 F P TR++ A SCS P+F WLQF P+ V V+P + T+ E P I+ SGIY DL R+H++FP +K + +N+ G + G+ + L P+ + N +WGRFL FG A Sbjct: 322 FLSPRTRILTRAG---TQISCSGAMPPMFNIGTH-WLQFLPAPSSV-VSPETLRPQTKSTWEYA-TPRAIAVSGIYTESDLNSLRDHIMFPLEKSSVLNNVAMGMSGKSITGKGISINQFLDPEVLESLANNTWDHLWGRFLTFGTASA 464 HSP 2 Score: 56.225 bits (134), Expect = 1.241e-16 Identity = 26/87 (29.89%), Postives = 51/87 (58.62%), Query Frame = -2 Query: 2342 KAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKC 2602 KA +++ +++Y+N+K ++ + ++YYDL+K+ C L R+IL L++A+ +PD L + G+ + GEV++ KC Sbjct: 209 KANSPVENLDIFMYVNSKFVYVERHFKSQINQMYYDLLKHKCELERQILTNALSIAVQSPDEFAFRLMKEPGHMAVVAGEVIHLVKC 295
BLAST of SMED30026417 vs. TrEMBL
Match: A0A151IXX8 (Uncharacterized protein OS=Trachymyrmex cornetzi OX=471704 GN=ALC57_14657 PE=4 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 4.735e-12 Identity = 36/128 (28.12%), Postives = 54/128 (42.19%), Query Frame = -1 Query: 1833 FSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNF-GEKPNYELLLSPDHFQHATANMMKAMWGRFLIFGQMMA 2213 SC+ V P+F D + PT P + + P ++ SGIY KDLE R+H++FP +K + + +G + + LL Q T N K +WG F+ FG A Sbjct: 340 ISCNCVIPPMFFLNDGWYRMTPTPEHSLPPTIMKPMTKPTWHYTNPGSLAASGIYSDKDLENLRDHIMFPAEKGGILNAMARGVKGEPIVSQGISLSHLLDESSIQKITENTWKKIWGNFISFGNASA 467 HSP 2 Score: 49.2914 bits (116), Expect = 4.735e-12 Identity = 23/95 (24.21%), Postives = 50/95 (52.63%), Query Frame = -2 Query: 2321 VKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIARL 2605 K ++ +++ ++ Y+N+K ++ + +Y D++K C L +++LK L++ I +PD + GY I GEV++ KC + ++ Sbjct: 211 TKHRLSTENLDIFTYINSKFVYVEKHIRSQMNLLYRDVLKQCCTLEQQVLKGALSLTINSPDEFAYQIMKGPGYMAVISGEVVHIIKCTPVVVKI 305
BLAST of SMED30026417 vs. TrEMBL
Match: A0A0J7KGQ0 (Uncharacterized protein OS=Lasius niger OX=67767 GN=RF55_10780 PE=4 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 2.704e-11 Identity = 70/348 (20.11%), Postives = 129/348 (37.07%), Query Frame = -2 Query: 2342 DFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRI-AGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAI--KKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKID--PKD-VKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKC 3367 D+ E+ +C V ++C HS +++ G + + C + F G + AG + + + + AGRI + DGSC+G +Y+ V+V ++ L ++ + N+ I K CV + C Y + + I E + T + NP+ TPT + T I K + C ++ + ++F+ + A D P D + ++ YMN+K ++ +Y+++++ C L R+++ L+ A PD L GY GEV + KC Sbjct: 61 DYDHAEVIQCKVEISRSIYYCGMHSHISVVHNGKADYIHETGYTRCLRMFQDGSFSLGAGNVIHGLKTNQTSFHSLTLAGRI-SNDGSCKGTQYSDPYGTWDDVVVQAVVKISLRQYHASVQLNSGKIILKSGTACVLSDSFCLDSNDGYTYWKPIPASSCNFHQYDILYEGPAT-----------------KITDDVTNPS---------TPTVYSLTTQDITFALTKTKEQPLCGYTLLRTEHPKLFILETKKGDTFAHRDVIPVDNLDIFAYMNSKFVYVEKHIRQQMTSLYHNVVQQKCDLERQVITNALSFATLQPDEFAYRLMKGPGYMAVTTGEVTHIVKC 381 HSP 2 Score: 44.669 bits (104), Expect = 2.704e-11 Identity = 48/176 (27.27%), Postives = 76/176 (43.18%), Query Frame = -1 Query: 1833 IPSDKCINKGKIRFAQ-PVT-----RMINPAKFIPNMFS----CSNVYGPLFETRDRSWLQF---PTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNFGEKPNYEL-----LLSPDHFQHATANMMKAMWGRFLIFGQMMA 2306 IP D I K K +++ PVT + P I F CS ++ D +W+QF P + P + +T L+ E P ++ SGIY +D+++ R+H++FP +K A + TI RG + G + + LL N +W F+ FG A Sbjct: 382 IPVDVTIRKTKDCYSELPVTVRNASLFLTPKSRIITKFGNERECSYELPTMYRVED-TWIQFAPDPQVRQLPPQLLQPMTTLSWEY-LTPGPLAISGIYSEQDIQKLRDHIMFPAEKPAL---LNTIARGLS-GHPVDSDAVSVYNLLDEASLNKIAENAASRVWNGFVKFGSATA 551
BLAST of SMED30026417 vs. TrEMBL
Match: A0A195EK66 (Uncharacterized protein OS=Trachymyrmex cornetzi OX=471704 GN=ALC57_01896 PE=4 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 3.744e-9 Identity = 90/407 (22.11%), Postives = 154/407 (37.84%), Query Frame = -2 Query: 2342 AEPFVVYDCNNIKIG-DKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIK-------TTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAI--KKYPQCVATHGSC--TTGMSTIVYHADTRSCRLTLLKSAIFDEV-QGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISN---VKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKC 3514 A V YDC + SL + +C + + ++ V + Q DF KT + +C + + ++C HS +I+ G + S C + TG I + GR DG I +TR + DG C G +Y+ V+V + +V L F++ N+ I C T G C T G T SC + +D + +GQ T Q PTI T+I ETT + S C +I + ++F+ V+++I ++ ++ Y+N+K ++ ++Y D+ + C L ++IL+ L ++ PD + GY + GE ++ KC Sbjct: 19 ARGLVGYDCGGHGLNITSLSLLDIGDCDSED---VEPITENVHVQLLQLSDFDKTRVIQCKIEIDRIIYYCGMHSHISIVHGGRRVYLQETAASNCRRIHETGTIDLGGR------DGYISGIKPNSSSTRSVTLAGYTSVDGRCSGTQYSDPYGTWDSVVVQATIKVTLRDFEAPIRRNSHEIILPSGLHCKVTAGECLDTDGGETFWSTVPPDSCHFSH-----YDVLYEGQASKLTPKANQT-------------TPTIYTVITRETT------------FALTQTGRTSLCGYTLIQTEHPKLFILETQQDRGFRVRSRISVNNLDIFAYVNSKFVYVEKHIRTQLTRLYRDITEQKCALEKQILQNALTLSSIAPDEMAHRIMKSPGYTAVVAGEAIHLIKC 386
BLAST of SMED30026417 vs. Planmine SMEST
Match: SMESG000053822.1 (SMESG000053822.1) HSP 1 Score: 810.061 bits (2091), Expect = 0.000e+0 Identity = 401/481 (83.37%), Postives = 434/481 (90.23%), Query Frame = -2 Query: 2300 DIIIKAIEPFILSQSGWQAFINLVSGDDQTDMMQTMLKELLKEFEIIINTSDPRTARKGMNAIITTILT*VMCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAIKKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIARLPENSRSP 3742 DII K IEPFIL+Q GWQAFINLVS DDQT+MMQ LKELL EFE IN SDP+TARKGMN IITTIL +MC+KG EPFVVYDC+NIKIGDKYSLKETEECKAANPG+LQ TATAVSYNVYQEVDFIKTEI+EC+VTRKIVAFHC +HS STIIE GTETTVV+VTRSECE+ F TG I IAGR+ VAAE+GKIKTTRVYAAGRI AGDG+C+GGEYTLLNQLV+GV+VIESYQVKLEK+Q YFDP+TQA+KKYPQC+AT SC TGMSTIVYHADTR+CRLTLLKSAIFDEVQGQVH ETETNTQK A++ELRRTG+I PTITT IGSE TPT V STD+ IGMRFIKGRMVSKCDEM+ S NYK IFLS I N KA+IDPKDVKLYLY+NNKMDFLYH+GLASTEKIYYDL+KNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIA+LPENS P Sbjct: 1202 DIIRKVIEPFILTQGGWQAFINLVSKDDQTEMMQAKLKELLTEFETTINASDPKTARKGMNTIITTILIWMMCVKGVEPFVVYDCDNIKIGDKYSLKETEECKAANPGKLQTTATAVSYNVYQEVDFIKTEIKECSVTRKIVAFHCGHHSHSTIIEAGTETTVVSVTRSECEEGFTTGRISIAGRVNVAAEEGKIKTTRVYAAGRITAGDGTCQGGEYTLLNQLVKGVVVIESYQVKLEKYQGYFDPDTQAMKKYPQCLATDRSCNTGMSTIVYHADTRTCRLTLLKSAIFDEVQGQVHRETETNTQKSALDELRRTGRIGKPTITTTIGSEVTPTVVISTDTTIGMRFIKGRMVSKCDEMVASTNYKGIFLSRTAIPNAKAQIDPKDVKLYLYINNKMDFLYHKGLASTEKIYYDLVKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIAKLPENSTIP 1682 HSP 2 Score: 278.87 bits (712), Expect = 0.000e+0 Identity = 135/171 (78.95%), Postives = 150/171 (87.72%), Query Frame = -3 Query: 3736 KGNGYMMEKRPRGQPKTNKPATEKKTKEQIQMDQLTTKLNKLSQITKQLQGKLTGQEQGAKWINKLIADMLGFSNPEAKINHKLSNIGTEAKQLWAIIKLIVTKIMDNKVRTKTKDPEELLLIINNLTKRSDDPNRYLVGIAYLMYNTITIYRKRTPNYNPNGYEFVITTL 4248 K G +MEK+ RG+ K +KPA E+KTKEQ+QMDQLTTKLNKLSQ+TKQLQGKL GQEQGAKWIN+LI DMLG +NPE K N KL+NIGTEAKQLWA IK I+ KIMDNK+RT TKDPEELLLIIN+LTKRSDDPNRYLVG+AYLMYNTI IYRKRTP YNPNGYEF IT + Sbjct: 1033 KETGTVMEKKSRGRTKIDKPAPERKTKEQMQMDQLTTKLNKLSQVTKQLQGKLKGQEQGAKWINRLITDMLGLANPEIKRNLKLNNIGTEAKQLWAAIKPIINKIMDNKLRTTTKDPEELLLIINHLTKRSDDPNRYLVGMAYLMYNTIAIYRKRTPRYNPNGYEFAITDI 1203 HSP 3 Score: 189.504 bits (480), Expect = 1.100e-111 Identity = 91/111 (81.98%), Postives = 98/111 (88.29%), Query Frame = -2 Query: 683 ESVSVIGKIWSTIEYKNVKINTYLAVIRKLSADCIIGMDFMPERLKEIIIDLGSMELRDRTGRICTLKFEVRCSENIVVPGRTQMICYVKVDEETRGEIIFEQITNLRKRE 1015 ESV+VIGKIWS IEYKNVKINTYLAVIR+LSADCIIG D MPE LKEIIIDLGSMELRD++GRIC LK EVRCSE IVVPGRTQMICYVKV+EETRGE+IFE KR+ Sbjct: 2005 ESVAVIGKIWSIIEYKNVKINTYLAVIRRLSADCIIGTDLMPELLKEIIIDLGSMELRDKSGRICMLKSEVRCSEKIVVPGRTQMICYVKVNEETRGEMIFEPNHKFEKRK 2115 HSP 4 Score: 169.088 bits (427), Expect = 1.100e-111 Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = -3 Query: 1021 PVEQNTPITRPTTLRNIYPTLYEPNWAELVSRTSRRSKSVDQEVETQTIAMLQTLAGPTLTIPIDINEFEIKAMIDTGANISEIKMHKIQGRLWPPIEETNMDVITC 1341 PVE++ P R TTLRNIYP YEPNWA+LV RTS+RS+SVDQ+ ET+TIAMLQTLAGPTLT+PI+IN EIKAMIDTGANIS IKM KI GRLWP IEE NMDVITC Sbjct: 1896 PVERHVPTPRSTTLRNIYPVPYEPNWADLVPRTSQRSRSVDQDPETRTIAMLQTLAGPTLTVPIEINGVEIKAMIDTGANISAIKMDKIPGRLWPCIEEANMDVITC 2002 HSP 5 Score: 64.3142 bits (155), Expect = 1.100e-111 Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 1428 GILTRMNGTDEEVGRNFKAIMKM*AERTRIKRQKTSNWKRWIDF-KXXXXXXXXXXNQRGTQKLTQGKLQQY 1640 IL+ + E GR FKAIM++ AE+TR+KRQKTSNW+RW++F + S ++ ++NQ GTQ LTQ +L+Q+ Sbjct: 1792 AILSNIVTITGEAGRKFKAIMRLEAEKTRMKRQKTSNWRRWMNFKDDSSDNSDKDENQGGTQMLTQEQLKQW 1863 HSP 6 Score: 46.2098 bits (108), Expect = 1.100e-111 Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = -2 Query: 1352 WENQKTKLNEHYNHLPPAYECLKK 1423 WEN+KT+ + HYNH PP YECLKK Sbjct: 1863 WENRKTRHSGHYNHPPPVYECLKK 1886 HSP 7 Score: 149.828 bits (377), Expect = 2.660e-64 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = -2 Query: 332 LTSITNNARAQWTNTHIVLTESVNRGLHQAARLEEQQRTILQLQRINEQLTNQVR*QAEEIRRLRIIQQGTEQRSWVEWISTTPEFTPEQDST 610 +T ITNNA+ QWTNTH+VLTESVNRGL QA RLEEQQRTILQLQRINEQLT+QVR QA+EIRRLR QQ + SWVEWI++ PEFTPE DST Sbjct: 4021 MTLITNNAQTQWTNTHLVLTESVNRGLQQAIRLEEQQRTILQLQRINEQLTDQVRWQADEIRRLRSNQQHVDPASWVEWIASMPEFTPEPDST 4113 HSP 8 Score: 117.857 bits (294), Expect = 2.660e-64 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 9 TISNQRIIVDMQTIIEKIRGSENPSEATRQIMKEKIRIINXXXXXXXXXXXXXXXXGTRQTRCGCRICTDCTIEVIETNIRTFPGCDE 272 T SNQ+I VDMQTIIE+IRGSENPSE TR+IMKEKI+++N I+E+ KCCKCK LLIG RQT+CGCRICTDCTIEVIET PGCDE Sbjct: 4119 TSSNQKIFVDMQTIIERIRGSENPSETTRRIMKEKIKVVNDIKERQKCCKCKELLIGARQTKCGCRICTDCTIEVIETKTIKCPGCDE 4206 HSP 9 Score: 213.772 bits (543), Expect = 6.710e-55 Identity = 102/121 (84.30%), Postives = 107/121 (88.43%), Query Frame = -1 Query: 1962 IPSDKCIN------KGKIRFAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTIT 2306 IP DKCIN KGKIRFAQPVTRMINP KF+PNMFSCSNVYGPLFE RD SWLQFPTRVIVAP ++FGLTELASEAEFKPVDIS+SGIYQTKDLERAREHLLFP Q+QA SNIVTIT Sbjct: 1681 IPRDKCINELEIMHKGKIRFAQPVTRMINPEKFVPNMFSCSNVYGPLFEIRDGSWLQFPTRVIVAPPKIFGLTELASEAEFKPVDISQSGIYQTKDLERAREHLLFPAQRQAILSNIVTIT 1801
BLAST of SMED30026417 vs. Planmine SMEST
Match: SMESG000066529.1 (SMESG000066529.1) HSP 1 Score: 808.905 bits (2088), Expect = 0.000e+0 Identity = 400/481 (83.16%), Postives = 436/481 (90.64%), Query Frame = -2 Query: 2300 DIIIKAIEPFILSQSGWQAFINLVSGDDQTDMMQTMLKELLKEFEIIINTSDPRTARKGMNAIITTILT*VMCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAIKKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIARLPENSRSP 3742 DII K IEPFIL+Q GWQAFINLVS DDQT++MQT LKELL EFE IN SDP+TARKGMNAIITTIL +MC+KG EPFVVYDC+NIKIGDKYSLKETEECKAANPG+LQ TATAVSYNVYQEVDFIKTEI+EC+VTRKIVAFHC +HS STIIE GTETTVV+VTR+ECE+ F TG I IAGR+ VAAE+GKIKTTRVYAAGRI AGDG+C+GGEYTLLNQLV+GV+VIESYQVKLEK+Q YFDP+TQA+KKYPQC+AT SC TGMSTIVYHADTR+CRLTLLKSAIFDEVQG+VHSETETNTQK A++ELRRTG+I PTITT IGSE TPT V STD+ IGMRFIKGRMVSKCDEM+ S NYK IFLS I N KA+I PKDVKLYLY+NNKMDFLYH+GLASTEKIYYDL+KNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIA+LPENS P Sbjct: 560 DIIRKVIEPFILTQGGWQAFINLVSKDDQTEIMQTKLKELLTEFETTINASDPKTARKGMNAIITTILIWMMCVKGVEPFVVYDCDNIKIGDKYSLKETEECKAANPGKLQTTATAVSYNVYQEVDFIKTEIKECSVTRKIVAFHCGHHSHSTIIEAGTETTVVSVTRNECEEGFTTGRISIAGRVNVAAEEGKIKTTRVYAAGRITAGDGTCQGGEYTLLNQLVKGVVVIESYQVKLEKYQGYFDPDTQAMKKYPQCLATDRSCNTGMSTIVYHADTRTCRLTLLKSAIFDEVQGRVHSETETNTQKSALDELRRTGRIGKPTITTTIGSEVTPTVVISTDTTIGMRFIKGRMVSKCDEMVASTNYKGIFLSRTAIPNAKAQIYPKDVKLYLYINNKMDFLYHKGLASTEKIYYDLVKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIAKLPENSTIP 1040 HSP 2 Score: 355.14 bits (910), Expect = 0.000e+0 Identity = 190/300 (63.33%), Postives = 218/300 (72.67%), Query Frame = -1 Query: 1428 IPSDKCIN------KGKIRFAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNFGEKPNYELLLSPDHFQHATANMMKAMWGRFLIFGQMMAXXXXXXXXXXXXXXXLTQMLAYFDIYKRERKINWKMTLGFLPFLAKTMVLHGHSKDIHKIKRLVGILTRMNGTDEEVGRNFKAIMKM*AERTRIKRQKTSNWKRWIDFK-XXXXXXXXXXNQRGTQKLTQGKLQQY 2306 IP DKCIN KGKIRFAQPVTRMINP KF+PNMFSCSNVYGPLFE RD SWLQFPTRVIVAP ++FGLTELASEAEFKPVD+S+SGIYQTKDLERAREHLLFP Q+QA SNIVT + +++ +I QM+A FDIYKRERKINWKM +GFLPFLAKTMVLHGHSKDIHKIKRLVGILT+MNGTDEEVGR FKAIM++ AE+TR+KRQKTSNWKRWI+FK + S ++ ++NQ GT+ LTQ +L+Q+ Sbjct: 1039 IPRDKCINELEIMHKGKIRFAQPVTRMINPEKFVPNMFSCSNVYGPLFEIRDGSWLQFPTRVIVAPPKIFGLTELASEAEFKPVDVSQSGIYQTKDLERAREHLLFPAQRQAILSNIVT---------------ITGGILGIILIIQIVR------VILTQMLAC---------------------FDIYKRERKINWKMAIGFLPFLAKTMVLHGHSKDIHKIKRLVGILTKMNGTDEEVGRKFKAIMRLEAEKTRMKRQKTSNWKRWINFKDDSSDNSDNDENQGGTRMLTQEQLKQW 1296 HSP 3 Score: 275.789 bits (704), Expect = 0.000e+0 Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = -3 Query: 3736 KGNGYMMEKRPRGQPKTNKPATEKKTKEQIQMDQLTTKLNKLSQITKQLQGKLTGQEQGAKWINKLIADMLGFSNPEAKINHKLSNIGTEAKQLWAIIKLIVTKIMDNKVRTKTKDPEELLLIINNLTKRSDDPNRYLVGIAYLMYNTITIYRKRTPNYNPNGYEFVITTL 4248 K G + EK+PRG+PK +KPA E+KTKEQ+QMDQLTTKLNKLSQ+TKQLQGKL GQEQGAKWIN+LI DMLG +NPE K N KL+NIG EAKQLW IK I+ KI+DNKVRT TKDPEELLLIIN+LTKR DDPNRYLVG+AYLMYNTI IYRKRTP YNPNGYEF IT + Sbjct: 391 KETGTVTEKKPRGRPKIDKPAPERKTKEQMQMDQLTTKLNKLSQVTKQLQGKLKGQEQGAKWINRLITDMLGLANPEIKRNLKLNNIGAEAKQLWTAIKPIINKIIDNKVRTTTKDPEELLLIINHLTKRFDDPNRYLVGMAYLMYNTIVIYRKRTPRYNPNGYEFAITDI 561 HSP 4 Score: 185.652 bits (470), Expect = 0.000e+0 Identity = 88/102 (86.27%), Postives = 94/102 (92.16%), Query Frame = -2 Query: 710 ESVSVIGKIWSTIEYKNVKINTYLAVIRKLSADCIIGMDFMPERLKEIIIDLGSMELRDRTGRICTLKFEVRCSENIVVPGRTQMICYVKVDEETRGEIIFE 1015 ESV+VIGKIWS IEYKNVKINTYLAVIR+LSADCIIG D MPE LKEIIIDLGSMELRD+TGRIC LK E+RCSE IVVPGRTQMICYVKV+ ETRGE+IFE Sbjct: 1438 ESVAVIGKIWSIIEYKNVKINTYLAVIRRLSADCIIGTDLMPELLKEIIIDLGSMELRDKTGRICMLKSELRCSEKIVVPGRTQMICYVKVNGETRGEMIFE 1539 HSP 5 Score: 174.481 bits (441), Expect = 0.000e+0 Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = -3 Query: 1021 PVEQNTPITRPTTLRNIYPTLYEPNWAELVSRTSRRSKSVDQEVETQTIAMLQTLAGPTLTIPIDINEFEIKAMIDTGANISEIKMHKIQGRLWPPIEETNMDVITC 1341 PV++ PI RPTTLRNIYP YEPNWA+LVSRTS+RS+SVDQ+ ET+TIAMLQTLAGPTLT+PI+IN EIKAMIDTGANIS IKM KI GRLWP IEE NMDVITC Sbjct: 1329 PVDRQVPIPRPTTLRNIYPVPYEPNWADLVSRTSQRSRSVDQDPETRTIAMLQTLAGPTLTVPIEINGVEIKAMIDTGANISAIKMDKIPGRLWPCIEEANMDVITC 1435 HSP 6 Score: 46.2098 bits (108), Expect = 0.000e+0 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2 Query: 1352 SWENQKTKLNEHYNHLPPAYECLKK 1426 WEN+KT+ + HYNH PP YECLKK Sbjct: 1295 QWENRKTRHSGHYNHPPPVYECLKK 1319 HSP 7 Score: 312.768 bits (800), Expect = 1.961e-115 Identity = 175/286 (61.19%), Postives = 213/286 (74.48%), Query Frame = -2 Query: 4313 RYLPTDIDDSVEEELTRLTETQKCRELAAILRTGAKNQR*TVTDLTKWIIESCNRI*NLRNTVKEIEEYIKV-CFVP*TI*RNHQEIETCRLGS*NYREERFKNHDTRFRTNRKGFYITVKVSEVKKRISYELLFHLQHEGRSLDDDIKIGVTPLQLGVINVLTVTKIEGRELNKREIKSKTLIGREESLNTPEIPLATDEITII-TGDEKILNDLNDIVNEEPTRKIPESRDLFXXXXXXXXXXXXXDGFVCAQKQQAETVEPNT--EKKERRKEDAESQQETNW 5158 +YLPTDIDD VEE LTRLTETQKCRELAAILRTGAKNQR TVTDL KWII+SC+R+ NLRN VKEIEEY ++ + P ++ + + + K F + FYIT KVSEVKKRI YE FHLQ+EGRSLDDD++IGVT +QLG+IN+LTV KI GRELNKREIK+KT IGR+ESLNTPE+P A DE+ +I TGDE+ILNDLNDIV+EE TR+IPESRDLF T++END+ TD+ D VC Q+Q E +EP+T EKK + + + + NW Sbjct: 86 KYLPTDIDDPVEEGLTRLTETQKCRELAAILRTGAKNQRRTVTDLAKWIIDSCSRVENLRNIVKEIEEYRRMYAWYPEQFREIIRKWKHTEWAAETIEKYSLKIMTPDFEPIEREFYITAKVSEVKKRIPYEPPFHLQYEGRSLDDDLEIGVTQMQLGLINILTVAKIAGRELNKREIKTKTPIGRQESLNTPEVPPAADEVIVITTGDEEILNDLNDIVDEEKTRRIPESRDLFMTEDENDLITDEPDELVCGQRQPVEIIEPDTEEEKKGKGRRSSTGDEWDNW 371 HSP 8 Score: 93.2041 bits (230), Expect = 1.961e-115 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = -1 Query: 5160 KPRSTQNVVGGMPQFLLKKYGT*ETSPFVKNDAIYITIEVETVKEMKILVQKEEARPRINVLEKRI 5357 KP+ST+NV GG+P+FLLKKY T FVK+D IYITIEVET +EMKI +Q+E+ARPRINVLEKRI Sbjct: 20 KPKSTENVAGGVPRFLLKKYVT---PQFVKDDTIYITIEVETEREMKIRIQQEQARPRINVLEKRI 82 HSP 9 Score: 54.299 bits (129), Expect = 1.961e-115 Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = -1 Query: 4233 STGDELDNRIKECGATTSRNTTDEQPKRKETDT 4331 STGDE DN I E GATTS+ TTDEQPKRKET T Sbjct: 363 STGDEWDNWINERGATTSKETTDEQPKRKETGT 395 HSP 10 Score: 145.591 bits (366), Expect = 1.677e-59 Identity = 71/96 (73.96%), Postives = 81/96 (84.38%), Query Frame = -2 Query: 332 CKL-TSITNNARAQWTNTHIVLTESVNRGLHQAARLEEQQRTILQLQRINEQLTNQVR*QAEEIRRLRIIQQGTEQRSWVEWISTTPEFTPEQDST 616 C+L T ITNNA+ QWTNTH+VLTESVNRGL QA RLEEQQRTI+QLQR+NEQL +QVR QA+EIRRLR QQ + SWVEWI++ PEFTPE DST Sbjct: 3276 CELMTLITNNAQTQWTNTHLVLTESVNRGLQQAIRLEEQQRTIIQLQRMNEQLADQVRWQADEIRRLRNNQQHVDPASWVEWIASMPEFTPEPDST 3371 HSP 11 Score: 106.301 bits (264), Expect = 1.677e-59 Identity = 62/81 (76.54%), Postives = 70/81 (86.42%), Query Frame = -1 Query: 3 DMQTIIEKIRGSENPSEATRQIMKEKIRIINXXXXXXXXXXXXXXXXGTRQTRCGCRICTDCTIEVIETNIRTFPGCDETF 245 D TIIE+IRGSENPSE TR+IMKEKI+++N I+E+LKCCKCK LLIG RQT+CGCRICTDCTIEVIET PGCDETF Sbjct: 3369 DSTTIIERIRGSENPSETTRRIMKEKIKVVNDIKERLKCCKCKELLIGARQTKCGCRICTDCTIEVIETETIKCPGCDETF 3449
BLAST of SMED30026417 vs. Planmine SMEST
Match: SMESG000066529.1 (SMESG000066529.1) HSP 1 Score: 808.905 bits (2088), Expect = 0.000e+0 Identity = 400/481 (83.16%), Postives = 436/481 (90.64%), Query Frame = -2 Query: 2300 DIIIKAIEPFILSQSGWQAFINLVSGDDQTDMMQTMLKELLKEFEIIINTSDPRTARKGMNAIITTILT*VMCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAIKKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIARLPENSRSP 3742 DII K IEPFIL+Q GWQAFINLVS DDQT++MQT LKELL EFE IN SDP+TARKGMNAIITTIL +MC+KG EPFVVYDC+NIKIGDKYSLKETEECKAANPG+LQ TATAVSYNVYQEVDFIKTEI+EC+VTRKIVAFHC +HS STIIE GTETTVV+VTR+ECE+ F TG I IAGR+ VAAE+GKIKTTRVYAAGRI AGDG+C+GGEYTLLNQLV+GV+VIESYQVKLEK+Q YFDP+TQA+KKYPQC+AT SC TGMSTIVYHADTR+CRLTLLKSAIFDEVQG+VHSETETNTQK A++ELRRTG+I PTITT IGSE TPT V STD+ IGMRFIKGRMVSKCDEM+ S NYK IFLS I N KA+I PKDVKLYLY+NNKMDFLYH+GLASTEKIYYDL+KNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIA+LPENS P Sbjct: 560 DIIRKVIEPFILTQGGWQAFINLVSKDDQTEIMQTKLKELLTEFETTINASDPKTARKGMNAIITTILIWMMCVKGVEPFVVYDCDNIKIGDKYSLKETEECKAANPGKLQTTATAVSYNVYQEVDFIKTEIKECSVTRKIVAFHCGHHSHSTIIEAGTETTVVSVTRNECEEGFTTGRISIAGRVNVAAEEGKIKTTRVYAAGRITAGDGTCQGGEYTLLNQLVKGVVVIESYQVKLEKYQGYFDPDTQAMKKYPQCLATDRSCNTGMSTIVYHADTRTCRLTLLKSAIFDEVQGRVHSETETNTQKSALDELRRTGRIGKPTITTTIGSEVTPTVVISTDTTIGMRFIKGRMVSKCDEMVASTNYKGIFLSRTAIPNAKAQIYPKDVKLYLYINNKMDFLYHKGLASTEKIYYDLVKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIAKLPENSTIP 1040 HSP 2 Score: 355.14 bits (910), Expect = 0.000e+0 Identity = 190/300 (63.33%), Postives = 218/300 (72.67%), Query Frame = -1 Query: 1428 IPSDKCIN------KGKIRFAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNFGEKPNYELLLSPDHFQHATANMMKAMWGRFLIFGQMMAXXXXXXXXXXXXXXXLTQMLAYFDIYKRERKINWKMTLGFLPFLAKTMVLHGHSKDIHKIKRLVGILTRMNGTDEEVGRNFKAIMKM*AERTRIKRQKTSNWKRWIDFK-XXXXXXXXXXNQRGTQKLTQGKLQQY 2306 IP DKCIN KGKIRFAQPVTRMINP KF+PNMFSCSNVYGPLFE RD SWLQFPTRVIVAP ++FGLTELASEAEFKPVD+S+SGIYQTKDLERAREHLLFP Q+QA SNIVT + +++ +I QM+A FDIYKRERKINWKM +GFLPFLAKTMVLHGHSKDIHKIKRLVGILT+MNGTDEEVGR FKAIM++ AE+TR+KRQKTSNWKRWI+FK + S ++ ++NQ GT+ LTQ +L+Q+ Sbjct: 1039 IPRDKCINELEIMHKGKIRFAQPVTRMINPEKFVPNMFSCSNVYGPLFEIRDGSWLQFPTRVIVAPPKIFGLTELASEAEFKPVDVSQSGIYQTKDLERAREHLLFPAQRQAILSNIVT---------------ITGGILGIILIIQIVR------VILTQMLAC---------------------FDIYKRERKINWKMAIGFLPFLAKTMVLHGHSKDIHKIKRLVGILTKMNGTDEEVGRKFKAIMRLEAEKTRMKRQKTSNWKRWINFKDDSSDNSDNDENQGGTRMLTQEQLKQW 1296 HSP 3 Score: 275.789 bits (704), Expect = 0.000e+0 Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = -3 Query: 3736 KGNGYMMEKRPRGQPKTNKPATEKKTKEQIQMDQLTTKLNKLSQITKQLQGKLTGQEQGAKWINKLIADMLGFSNPEAKINHKLSNIGTEAKQLWAIIKLIVTKIMDNKVRTKTKDPEELLLIINNLTKRSDDPNRYLVGIAYLMYNTITIYRKRTPNYNPNGYEFVITTL 4248 K G + EK+PRG+PK +KPA E+KTKEQ+QMDQLTTKLNKLSQ+TKQLQGKL GQEQGAKWIN+LI DMLG +NPE K N KL+NIG EAKQLW IK I+ KI+DNKVRT TKDPEELLLIIN+LTKR DDPNRYLVG+AYLMYNTI IYRKRTP YNPNGYEF IT + Sbjct: 391 KETGTVTEKKPRGRPKIDKPAPERKTKEQMQMDQLTTKLNKLSQVTKQLQGKLKGQEQGAKWINRLITDMLGLANPEIKRNLKLNNIGAEAKQLWTAIKPIINKIIDNKVRTTTKDPEELLLIINHLTKRFDDPNRYLVGMAYLMYNTIVIYRKRTPRYNPNGYEFAITDI 561 HSP 4 Score: 185.652 bits (470), Expect = 0.000e+0 Identity = 88/102 (86.27%), Postives = 94/102 (92.16%), Query Frame = -2 Query: 710 ESVSVIGKIWSTIEYKNVKINTYLAVIRKLSADCIIGMDFMPERLKEIIIDLGSMELRDRTGRICTLKFEVRCSENIVVPGRTQMICYVKVDEETRGEIIFE 1015 ESV+VIGKIWS IEYKNVKINTYLAVIR+LSADCIIG D MPE LKEIIIDLGSMELRD+TGRIC LK E+RCSE IVVPGRTQMICYVKV+ ETRGE+IFE Sbjct: 1438 ESVAVIGKIWSIIEYKNVKINTYLAVIRRLSADCIIGTDLMPELLKEIIIDLGSMELRDKTGRICMLKSELRCSEKIVVPGRTQMICYVKVNGETRGEMIFE 1539 HSP 5 Score: 174.481 bits (441), Expect = 0.000e+0 Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = -3 Query: 1021 PVEQNTPITRPTTLRNIYPTLYEPNWAELVSRTSRRSKSVDQEVETQTIAMLQTLAGPTLTIPIDINEFEIKAMIDTGANISEIKMHKIQGRLWPPIEETNMDVITC 1341 PV++ PI RPTTLRNIYP YEPNWA+LVSRTS+RS+SVDQ+ ET+TIAMLQTLAGPTLT+PI+IN EIKAMIDTGANIS IKM KI GRLWP IEE NMDVITC Sbjct: 1329 PVDRQVPIPRPTTLRNIYPVPYEPNWADLVSRTSQRSRSVDQDPETRTIAMLQTLAGPTLTVPIEINGVEIKAMIDTGANISAIKMDKIPGRLWPCIEEANMDVITC 1435 HSP 6 Score: 46.2098 bits (108), Expect = 0.000e+0 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2 Query: 1352 SWENQKTKLNEHYNHLPPAYECLKK 1426 WEN+KT+ + HYNH PP YECLKK Sbjct: 1295 QWENRKTRHSGHYNHPPPVYECLKK 1319 HSP 7 Score: 312.768 bits (800), Expect = 1.913e-115 Identity = 175/286 (61.19%), Postives = 213/286 (74.48%), Query Frame = -2 Query: 4313 RYLPTDIDDSVEEELTRLTETQKCRELAAILRTGAKNQR*TVTDLTKWIIESCNRI*NLRNTVKEIEEYIKV-CFVP*TI*RNHQEIETCRLGS*NYREERFKNHDTRFRTNRKGFYITVKVSEVKKRISYELLFHLQHEGRSLDDDIKIGVTPLQLGVINVLTVTKIEGRELNKREIKSKTLIGREESLNTPEIPLATDEITII-TGDEKILNDLNDIVNEEPTRKIPESRDLFXXXXXXXXXXXXXDGFVCAQKQQAETVEPNT--EKKERRKEDAESQQETNW 5158 +YLPTDIDD VEE LTRLTETQKCRELAAILRTGAKNQR TVTDL KWII+SC+R+ NLRN VKEIEEY ++ + P ++ + + + K F + FYIT KVSEVKKRI YE FHLQ+EGRSLDDD++IGVT +QLG+IN+LTV KI GRELNKREIK+KT IGR+ESLNTPE+P A DE+ +I TGDE+ILNDLNDIV+EE TR+IPESRDLF T++END+ TD+ D VC Q+Q E +EP+T EKK + + + + NW Sbjct: 86 KYLPTDIDDPVEEGLTRLTETQKCRELAAILRTGAKNQRRTVTDLAKWIIDSCSRVENLRNIVKEIEEYRRMYAWYPEQFREIIRKWKHTEWAAETIEKYSLKIMTPDFEPIEREFYITAKVSEVKKRIPYEPPFHLQYEGRSLDDDLEIGVTQMQLGLINILTVAKIAGRELNKREIKTKTPIGRQESLNTPEVPPAADEVIVITTGDEEILNDLNDIVDEEKTRRIPESRDLFMTEDENDLITDEPDELVCGQRQPVEIIEPDTEEEKKGKGRRSSTGDEWDNW 371 HSP 8 Score: 93.2041 bits (230), Expect = 1.913e-115 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = -1 Query: 5160 KPRSTQNVVGGMPQFLLKKYGT*ETSPFVKNDAIYITIEVETVKEMKILVQKEEARPRINVLEKRI 5357 KP+ST+NV GG+P+FLLKKY T FVK+D IYITIEVET +EMKI +Q+E+ARPRINVLEKRI Sbjct: 20 KPKSTENVAGGVPRFLLKKYVT---PQFVKDDTIYITIEVETEREMKIRIQQEQARPRINVLEKRI 82 HSP 9 Score: 54.299 bits (129), Expect = 1.913e-115 Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = -1 Query: 4233 STGDELDNRIKECGATTSRNTTDEQPKRKETDT 4331 STGDE DN I E GATTS+ TTDEQPKRKET T Sbjct: 363 STGDEWDNWINERGATTSKETTDEQPKRKETGT 395 HSP 10 Score: 113.235 bits (282), Expect = 2.119e-24 Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = -1 Query: 3 VDMQTIIEKIRGSENPSEATRQIMKEKIRIINXXXXXXXXXXXXXXXXGTRQTRCGCRICTDCTIEVIETNIRTFPGCDETF 248 VDMQTIIE+IRGSENPSE TR+IMKEKI+++N I+E+LKCCKCK LLIG RQT+CGCRICTDCTIEVIET PGCDETF Sbjct: 3364 VDMQTIIERIRGSENPSETTRRIMKEKIKVVNDIKERLKCCKCKELLIGARQTKCGCRICTDCTIEVIETETIKCPGCDETF 3445 HSP 11 Score: 110.923 bits (276), Expect = 9.133e-24 Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = -2 Query: 404 CKL-TSITNNARAQWTNTHIVLTESVNRGLHQAARLEEQQRTILQLQRINEQLTNQVR*QAEEIRRLRIIQQ 616 C+L T ITNNA+ QWTNTH+VLTESVNRGL QA RLEEQQRTI+QLQR+NEQL +QVR QA+EIRRLR QQ Sbjct: 3276 CELMTLITNNAQTQWTNTHLVLTESVNRGLQQAIRLEEQQRTIIQLQRMNEQLADQVRWQADEIRRLRNNQQ 3347
BLAST of SMED30026417 vs. Planmine SMEST
Match: SMESG000066529.1 (SMESG000066529.1) HSP 1 Score: 808.52 bits (2087), Expect = 0.000e+0 Identity = 400/481 (83.16%), Postives = 436/481 (90.64%), Query Frame = -2 Query: 2300 DIIIKAIEPFILSQSGWQAFINLVSGDDQTDMMQTMLKELLKEFEIIINTSDPRTARKGMNAIITTILT*VMCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAIKKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIARLPENSRSP 3742 DII K IEPFIL+Q GWQAFINLVS DDQT++MQT LKELL EFE IN SDP+TARKGMNAIITTIL +MC+KG EPFVVYDC+NIKIGDKYSLKETEECKAANPG+LQ TATAVSYNVYQEVDFIKTEI+EC+VTRKIVAFHC +HS STIIE GTETTVV+VTR+ECE+ F TG I IAGR+ VAAE+GKIKTTRVYAAGRI AGDG+C+GGEYTLLNQLV+GV+VIESYQVKLEK+Q YFDP+TQA+KKYPQC+AT SC TGMSTIVYHADTR+CRLTLLKSAIFDEVQG+VHSETETNTQK A++ELRRTG+I PTITT IGSE TPT V STD+ IGMRFIKGRMVSKCDEM+ S NYK IFLS I N KA+I PKDVKLYLY+NNKMDFLYH+GLASTEKIYYDL+KNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIA+LPENS P Sbjct: 560 DIIRKVIEPFILTQGGWQAFINLVSKDDQTEIMQTKLKELLTEFETTINASDPKTARKGMNAIITTILIWMMCVKGVEPFVVYDCDNIKIGDKYSLKETEECKAANPGKLQTTATAVSYNVYQEVDFIKTEIKECSVTRKIVAFHCGHHSHSTIIEAGTETTVVSVTRNECEEGFTTGRISIAGRVNVAAEEGKIKTTRVYAAGRITAGDGTCQGGEYTLLNQLVKGVVVIESYQVKLEKYQGYFDPDTQAMKKYPQCLATDRSCNTGMSTIVYHADTRTCRLTLLKSAIFDEVQGRVHSETETNTQKSALDELRRTGRIGKPTITTTIGSEVTPTVVISTDTTIGMRFIKGRMVSKCDEMVASTNYKGIFLSRTAIPNAKAQIYPKDVKLYLYINNKMDFLYHKGLASTEKIYYDLVKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIAKLPENSTIP 1040 HSP 2 Score: 330.102 bits (845), Expect = 0.000e+0 Identity = 181/300 (60.33%), Postives = 205/300 (68.33%), Query Frame = -1 Query: 1428 IPSDKCIN------KGKIRFAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTITRGNNFGEKPNYELLLSPDHFQHATANMMKAMWGRFLIFGQMMAXXXXXXXXXXXXXXXLTQMLAYFDIYKRERKINWKMTLGFLPFLAKTMVLHGHSKDIHKIKRLVGILTRMNGTDEEVGRNFKAIMKM*AERTRIKRQKTSNWKRWIDFK-XXXXXXXXXXNQRGTQKLTQGKLQQY 2306 IP DKCIN KGKIRFAQPVTRMINP KF+PNMFSCSNVYGPLFE RD SWLQFPTRVIVAP ++FGLTELASEAEFKPVD+S+SGIYQTKDLERAR E LL P Q +N++ I G A FDIYKRERKINWKM +GFLPFLAKTMVLHGHSKDIHKIKRLVGILT+MNGTDEEVGR FKAIM++ AE+TR+KRQKTSNWKRWI+FK + S ++ ++NQ GT+ LTQ +L+Q+ Sbjct: 1039 IPRDKCINELEIMHKGKIRFAQPVTRMINPEKFVPNMFSCSNVYGPLFEIRDGSWLQFPTRVIVAPPKIFGLTELASEAEFKPVDVSQSGIYQTKDLERAR-------------------------------EHLLFPAQRQAILSNIV-------TITG------------------------ACFDIYKRERKINWKMAIGFLPFLAKTMVLHGHSKDIHKIKRLVGILTKMNGTDEEVGRKFKAIMRLEAEKTRMKRQKTSNWKRWINFKDDSSDNSDNDENQGGTRMLTQEQLKQW 1276 HSP 3 Score: 275.789 bits (704), Expect = 0.000e+0 Identity = 133/171 (77.78%), Postives = 148/171 (86.55%), Query Frame = -3 Query: 3736 KGNGYMMEKRPRGQPKTNKPATEKKTKEQIQMDQLTTKLNKLSQITKQLQGKLTGQEQGAKWINKLIADMLGFSNPEAKINHKLSNIGTEAKQLWAIIKLIVTKIMDNKVRTKTKDPEELLLIINNLTKRSDDPNRYLVGIAYLMYNTITIYRKRTPNYNPNGYEFVITTL 4248 K G + EK+PRG+PK +KPA E+KTKEQ+QMDQLTTKLNKLSQ+TKQLQGKL GQEQGAKWIN+LI DMLG +NPE K N KL+NIG EAKQLW IK I+ KI+DNKVRT TKDPEELLLIIN+LTKR DDPNRYLVG+AYLMYNTI IYRKRTP YNPNGYEF IT + Sbjct: 391 KETGTVTEKKPRGRPKIDKPAPERKTKEQMQMDQLTTKLNKLSQVTKQLQGKLKGQEQGAKWINRLITDMLGLANPEIKRNLKLNNIGAEAKQLWTAIKPIINKIIDNKVRTTTKDPEELLLIINHLTKRFDDPNRYLVGMAYLMYNTIVIYRKRTPRYNPNGYEFAITDI 561 HSP 4 Score: 185.652 bits (470), Expect = 0.000e+0 Identity = 88/102 (86.27%), Postives = 94/102 (92.16%), Query Frame = -2 Query: 710 ESVSVIGKIWSTIEYKNVKINTYLAVIRKLSADCIIGMDFMPERLKEIIIDLGSMELRDRTGRICTLKFEVRCSENIVVPGRTQMICYVKVDEETRGEIIFE 1015 ESV+VIGKIWS IEYKNVKINTYLAVIR+LSADCIIG D MPE LKEIIIDLGSMELRD+TGRIC LK E+RCSE IVVPGRTQMICYVKV+ ETRGE+IFE Sbjct: 1418 ESVAVIGKIWSIIEYKNVKINTYLAVIRRLSADCIIGTDLMPELLKEIIIDLGSMELRDKTGRICMLKSELRCSEKIVVPGRTQMICYVKVNGETRGEMIFE 1519 HSP 5 Score: 174.481 bits (441), Expect = 0.000e+0 Identity = 85/107 (79.44%), Postives = 94/107 (87.85%), Query Frame = -3 Query: 1021 PVEQNTPITRPTTLRNIYPTLYEPNWAELVSRTSRRSKSVDQEVETQTIAMLQTLAGPTLTIPIDINEFEIKAMIDTGANISEIKMHKIQGRLWPPIEETNMDVITC 1341 PV++ PI RPTTLRNIYP YEPNWA+LVSRTS+RS+SVDQ+ ET+TIAMLQTLAGPTLT+PI+IN EIKAMIDTGANIS IKM KI GRLWP IEE NMDVITC Sbjct: 1309 PVDRQVPIPRPTTLRNIYPVPYEPNWADLVSRTSQRSRSVDQDPETRTIAMLQTLAGPTLTVPIEINGVEIKAMIDTGANISAIKMDKIPGRLWPCIEEANMDVITC 1415 HSP 6 Score: 46.2098 bits (108), Expect = 0.000e+0 Identity = 17/25 (68.00%), Postives = 20/25 (80.00%), Query Frame = -2 Query: 1352 SWENQKTKLNEHYNHLPPAYECLKK 1426 WEN+KT+ + HYNH PP YECLKK Sbjct: 1275 QWENRKTRHSGHYNHPPPVYECLKK 1299 HSP 7 Score: 312.768 bits (800), Expect = 2.202e-115 Identity = 175/286 (61.19%), Postives = 213/286 (74.48%), Query Frame = -2 Query: 4313 RYLPTDIDDSVEEELTRLTETQKCRELAAILRTGAKNQR*TVTDLTKWIIESCNRI*NLRNTVKEIEEYIKV-CFVP*TI*RNHQEIETCRLGS*NYREERFKNHDTRFRTNRKGFYITVKVSEVKKRISYELLFHLQHEGRSLDDDIKIGVTPLQLGVINVLTVTKIEGRELNKREIKSKTLIGREESLNTPEIPLATDEITII-TGDEKILNDLNDIVNEEPTRKIPESRDLFXXXXXXXXXXXXXDGFVCAQKQQAETVEPNT--EKKERRKEDAESQQETNW 5158 +YLPTDIDD VEE LTRLTETQKCRELAAILRTGAKNQR TVTDL KWII+SC+R+ NLRN VKEIEEY ++ + P ++ + + + K F + FYIT KVSEVKKRI YE FHLQ+EGRSLDDD++IGVT +QLG+IN+LTV KI GRELNKREIK+KT IGR+ESLNTPE+P A DE+ +I TGDE+ILNDLNDIV+EE TR+IPESRDLF T++END+ TD+ D VC Q+Q E +EP+T EKK + + + + NW Sbjct: 86 KYLPTDIDDPVEEGLTRLTETQKCRELAAILRTGAKNQRRTVTDLAKWIIDSCSRVENLRNIVKEIEEYRRMYAWYPEQFREIIRKWKHTEWAAETIEKYSLKIMTPDFEPIEREFYITAKVSEVKKRIPYEPPFHLQYEGRSLDDDLEIGVTQMQLGLINILTVAKIAGRELNKREIKTKTPIGRQESLNTPEVPPAADEVIVITTGDEEILNDLNDIVDEEKTRRIPESRDLFMTEDENDLITDEPDELVCGQRQPVEIIEPDTEEEKKGKGRRSSTGDEWDNW 371 HSP 8 Score: 93.2041 bits (230), Expect = 2.202e-115 Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = -1 Query: 5160 KPRSTQNVVGGMPQFLLKKYGT*ETSPFVKNDAIYITIEVETVKEMKILVQKEEARPRINVLEKRI 5357 KP+ST+NV GG+P+FLLKKY T FVK+D IYITIEVET +EMKI +Q+E+ARPRINVLEKRI Sbjct: 20 KPKSTENVAGGVPRFLLKKYVT---PQFVKDDTIYITIEVETEREMKIRIQQEQARPRINVLEKRI 82 HSP 9 Score: 53.9138 bits (128), Expect = 2.202e-115 Identity = 26/33 (78.79%), Postives = 27/33 (81.82%), Query Frame = -1 Query: 4233 STGDELDNRIKECGATTSRNTTDEQPKRKETDT 4331 STGDE DN I E GATTS+ TTDEQPKRKET T Sbjct: 363 STGDEWDNWINERGATTSKETTDEQPKRKETGT 395 HSP 10 Score: 113.235 bits (282), Expect = 2.082e-24 Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = -1 Query: 3 VDMQTIIEKIRGSENPSEATRQIMKEKIRIINXXXXXXXXXXXXXXXXGTRQTRCGCRICTDCTIEVIETNIRTFPGCDETF 248 VDMQTIIE+IRGSENPSE TR+IMKEKI+++N I+E+LKCCKCK LLIG RQT+CGCRICTDCTIEVIET PGCDETF Sbjct: 3344 VDMQTIIERIRGSENPSETTRRIMKEKIKVVNDIKERLKCCKCKELLIGARQTKCGCRICTDCTIEVIETETIKCPGCDETF 3425 HSP 11 Score: 110.923 bits (276), Expect = 9.600e-24 Identity = 56/72 (77.78%), Postives = 63/72 (87.50%), Query Frame = -2 Query: 404 CKL-TSITNNARAQWTNTHIVLTESVNRGLHQAARLEEQQRTILQLQRINEQLTNQVR*QAEEIRRLRIIQQ 616 C+L T ITNNA+ QWTNTH+VLTESVNRGL QA RLEEQQRTI+QLQR+NEQL +QVR QA+EIRRLR QQ Sbjct: 3256 CELMTLITNNAQTQWTNTHLVLTESVNRGLQQAIRLEEQQRTIIQLQRMNEQLADQVRWQADEIRRLRNNQQ 3327
BLAST of SMED30026417 vs. Planmine SMEST
Match: SMESG000053822.1 (SMESG000053822.1) HSP 1 Score: 806.979 bits (2083), Expect = 0.000e+0 Identity = 401/481 (83.37%), Postives = 434/481 (90.23%), Query Frame = -2 Query: 2300 DIIIKAIEPFILSQSGWQAFINLVSGDDQTDMMQTMLKELLKEFEIIINTSDPRTARKGMNAIITTILT*VMCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVYQEVDFIKTEIRECTVTRKIVAFHCRNHSQSXXXXXXXXXXXXXXTRSECEKRFNTGVIRIAGRIQVAAEDGKIKTTRVYAAGRIKAGDGSCEGGEYTLLNQLVRGVLVIESYQVKLEKFQSYFDPNTQAIKKYPQCVATHGSCTTGMSTIVYHADTRSCRLTLLKSAIFDEVQGQVHSETETNTQKRAMEELRRTGQIRNPTITTIIGSETTPTGVNSTDSAIGMRFIKGRMVSKCDEMIISINYKEIFLS*ITISNVKAKIDPKDVKLYLYMNNKMDFLYHRGLASTEKIYYDLIKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIARLPENSRSP 3742 DII K IEPFIL+Q GWQAFINLVS DDQT+MMQ LKELL EFE IN SDP+TARKGMN IITTIL +MC+KG EPFVVYDC+NIKIGDKYSLKETEECKAANPG+LQ TATAVSYNVYQEVDFIKTEI+EC+VTRKIVAFHC +HS STIIE GTETTVV+VTRSECE+ F TG I IAGR+ VAAE+GKIKTTRVYAAGRI AGDG+C+GGEYTLLNQLV+GV+VIESYQVKLEK+Q YFDP+TQA+KKYPQC+AT SC TGMSTIVYHADTR+CRLTLLKSAIFDEVQGQVH ETETNTQK A++ELRRTG+I PTITT IGSE TPT V STD+ IGMRFIKGRMVSKCDEM+ S NYK IFLS I N KA+IDPKDVKLYLY+NNKMDFLYH+GLASTEKIYYDL+KNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIA+LPENS P Sbjct: 1208 DIIRKVIEPFILTQGGWQAFINLVSKDDQTEMMQAKLKELLTEFETTINASDPKTARKGMNTIITTILIWMMCVKGVEPFVVYDCDNIKIGDKYSLKETEECKAANPGKLQTTATAVSYNVYQEVDFIKTEIKECSVTRKIVAFHCGHHSHSTIIEAGTETTVVSVTRSECEEGFTTGRISIAGRVNVAAEEGKIKTTRVYAAGRITAGDGTCQGGEYTLLNQLVKGVVVIESYQVKLEKYQGYFDPDTQAMKKYPQCLATDRSCNTGMSTIVYHADTRTCRLTLLKSAIFDEVQGQVHRETETNTQKSALDELRRTGRIGKPTITTTIGSEVTPTVVISTDTTIGMRFIKGRMVSKCDEMVASTNYKGIFLSRTAIPNAKAQIDPKDVKLYLYINNKMDFLYHKGLASTEKIYYDLVKNDCILNREILKTKLAMAITNPDNAIPLLPLQEGYFGRIVGEVMYTYKCEKTIAKLPENSTIP 1688 HSP 2 Score: 278.1 bits (710), Expect = 0.000e+0 Identity = 135/171 (78.95%), Postives = 150/171 (87.72%), Query Frame = -3 Query: 3736 KGNGYMMEKRPRGQPKTNKPATEKKTKEQIQMDQLTTKLNKLSQITKQLQGKLTGQEQGAKWINKLIADMLGFSNPEAKINHKLSNIGTEAKQLWAIIKLIVTKIMDNKVRTKTKDPEELLLIINNLTKRSDDPNRYLVGIAYLMYNTITIYRKRTPNYNPNGYEFVITTL 4248 K G +MEK+ RG+ K +KPA E+KTKEQ+QMDQLTTKLNKLSQ+TKQLQGKL GQEQGAKWIN+LI DMLG +NPE K N KL+NIGTEAKQLWA IK I+ KIMDNK+RT TKDPEELLLIIN+LTKRSDDPNRYLVG+AYLMYNTI IYRKRTP YNPNGYEF IT + Sbjct: 1039 KETGTVMEKKSRGRTKIDKPAPERKTKEQMQMDQLTTKLNKLSQVTKQLQGKLKGQEQGAKWINRLITDMLGLANPEIKRNLKLNNIGTEAKQLWAAIKPIINKIMDNKLRTTTKDPEELLLIINHLTKRSDDPNRYLVGMAYLMYNTIAIYRKRTPRYNPNGYEFAITDI 1209 HSP 3 Score: 189.119 bits (479), Expect = 7.483e-112 Identity = 91/111 (81.98%), Postives = 98/111 (88.29%), Query Frame = -2 Query: 683 ESVSVIGKIWSTIEYKNVKINTYLAVIRKLSADCIIGMDFMPERLKEIIIDLGSMELRDRTGRICTLKFEVRCSENIVVPGRTQMICYVKVDEETRGEIIFEQITNLRKRE 1015 ESV+VIGKIWS IEYKNVKINTYLAVIR+LSADCIIG D MPE LKEIIIDLGSMELRD++GRIC LK EVRCSE IVVPGRTQMICYVKV+EETRGE+IFE KR+ Sbjct: 2011 ESVAVIGKIWSIIEYKNVKINTYLAVIRRLSADCIIGTDLMPELLKEIIIDLGSMELRDKSGRICMLKSEVRCSEKIVVPGRTQMICYVKVNEETRGEMIFEPNHKFEKRK 2121 HSP 4 Score: 169.088 bits (427), Expect = 7.483e-112 Identity = 83/107 (77.57%), Postives = 92/107 (85.98%), Query Frame = -3 Query: 1021 PVEQNTPITRPTTLRNIYPTLYEPNWAELVSRTSRRSKSVDQEVETQTIAMLQTLAGPTLTIPIDINEFEIKAMIDTGANISEIKMHKIQGRLWPPIEETNMDVITC 1341 PVE++ P R TTLRNIYP YEPNWA+LV RTS+RS+SVDQ+ ET+TIAMLQTLAGPTLT+PI+IN EIKAMIDTGANIS IKM KI GRLWP IEE NMDVITC Sbjct: 1902 PVERHVPTPRSTTLRNIYPVPYEPNWADLVPRTSQRSRSVDQDPETRTIAMLQTLAGPTLTVPIEINGVEIKAMIDTGANISAIKMDKIPGRLWPCIEEANMDVITC 2008 HSP 5 Score: 65.0846 bits (157), Expect = 7.483e-112 Identity = 36/72 (50.00%), Postives = 53/72 (73.61%), Query Frame = -1 Query: 1428 GILTRMNGTDEEVGRNFKAIMKM*AERTRIKRQKTSNWKRWIDF-KXXXXXXXXXXNQRGTQKLTQGKLQQY 1640 IL+ + E GR FKAIM++ AE+TR+KRQKTSNW+RW++F + S ++ ++NQ GTQ LTQ +L+Q+ Sbjct: 1798 AILSNIVTITGEAGRKFKAIMRLEAEKTRMKRQKTSNWRRWMNFKDDSSDNSDKDENQGGTQMLTQEQLKQW 1869 HSP 6 Score: 46.2098 bits (108), Expect = 7.483e-112 Identity = 17/24 (70.83%), Postives = 20/24 (83.33%), Query Frame = -2 Query: 1352 WENQKTKLNEHYNHLPPAYECLKK 1423 WEN+KT+ + HYNH PP YECLKK Sbjct: 1869 WENRKTRHSGHYNHPPPVYECLKK 1892 HSP 7 Score: 150.984 bits (380), Expect = 1.702e-64 Identity = 72/93 (77.42%), Postives = 80/93 (86.02%), Query Frame = -2 Query: 332 LTSITNNARAQWTNTHIVLTESVNRGLHQAARLEEQQRTILQLQRINEQLTNQVR*QAEEIRRLRIIQQGTEQRSWVEWISTTPEFTPEQDST 610 +T ITNNA+ QWTNTH+VLTESVNRGL QA RLEEQQRTILQLQRINEQLT+QVR QA+EIRRLR QQ + SWVEWI++ PEFTPE DST Sbjct: 4034 MTLITNNAQTQWTNTHLVLTESVNRGLQQAIRLEEQQRTILQLQRINEQLTDQVRWQADEIRRLRSNQQHVDPASWVEWIASMPEFTPEPDST 4126 HSP 8 Score: 117.472 bits (293), Expect = 1.702e-64 Identity = 67/88 (76.14%), Postives = 76/88 (86.36%), Query Frame = -1 Query: 9 TISNQRIIVDMQTIIEKIRGSENPSEATRQIMKEKIRIINXXXXXXXXXXXXXXXXGTRQTRCGCRICTDCTIEVIETNIRTFPGCDE 272 T SNQ+I VDMQTIIE+IRGSENPSE TR+IMKEKI+++N I+E+ KCCKCK LLIG RQT+CGCRICTDCTIEVIET PGCDE Sbjct: 4132 TSSNQKIFVDMQTIIERIRGSENPSETTRRIMKEKIKVVNDIKERQKCCKCKELLIGARQTKCGCRICTDCTIEVIETKTIKCPGCDE 4219 HSP 9 Score: 213.001 bits (541), Expect = 1.137e-54 Identity = 102/121 (84.30%), Postives = 107/121 (88.43%), Query Frame = -1 Query: 1962 IPSDKCIN------KGKIRFAQPVTRMINPAKFIPNMFSCSNVYGPLFETRDRSWLQFPTRVIVAPLRVFGLTELASEAEFKPVDISRSGIYQTKDLERAREHLLFPTQKQAT*SNIVTIT 2306 IP DKCIN KGKIRFAQPVTRMINP KF+PNMFSCSNVYGPLFE RD SWLQFPTRVIVAP ++FGLTELASEAEFKPVDIS+SGIYQTKDLERAREHLLFP Q+QA SNIVTIT Sbjct: 1687 IPRDKCINELEIMHKGKIRFAQPVTRMINPEKFVPNMFSCSNVYGPLFEIRDGSWLQFPTRVIVAPPKIFGLTELASEAEFKPVDISQSGIYQTKDLERAREHLLFPAQRQAILSNIVTIT 1807 The following BLAST results are available for this feature:
BLAST of SMED30026417 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30026417 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30026417 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30026417 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30026417 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30026417 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30026417 ID=SMED30026417|Name=SMED30026417|organism=Schmidtea mediterranea sexual|type=transcript|length=5981bpback to top protein sequence of SMED30026417-orf-1 >SMED30026417-orf-1 ID=SMED30026417-orf-1|Name=SMED30026417-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=303bp MCIKGAEPFVVYDCNNIKIGDKYSLKETEECKAANPGRLQRTATAVSYNVback to top protein sequence of SMED30026417-orf-2 >SMED30026417-orf-2 ID=SMED30026417-orf-2|Name=SMED30026417-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=121bp MREDNRKVTGKLKIPSDKCINKGKIRFAQPVTRMINPAKFIPNMFSCSNVback to top protein sequence of SMED30026417-orf-3 >SMED30026417-orf-3 ID=SMED30026417-orf-3|Name=SMED30026417-orf-3|organism=Schmidtea mediterranea sexual|type=polypeptide|length=189bp MWSYDVKKHNRRATQTKGNGYMMEKRPRGQPKTNKPATEKKTKEQIQMDQback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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