Voltage-dependent N-type calcium channel subunit alpha

Overview


Name	Voltage-dependent N-type calcium channel subunit alpha
Smed ID	SMED30026282
Length (bp)	377

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Voltage-dependent N-type calcium channel subunit alpha (SMED30026282) t-SNE clustered cells

Violin plots show distribution of expression levels for Voltage-dependent N-type calcium channel subunit alpha (SMED30026282) in cells (dots) of each of the 12 neoblast clusters.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30026282

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
gut	SMED30026282	h1SMcG0020675	Contig6657	newmark_ests	PMID:23079596 Forsthoefel et al., 2012
gut	SMED30026282	h1SMcG0020675	Contig6657	uc_Smed_v2	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30026282	h1SMcG0020675	Contig6657	newmark_ests	PMID:23079596 Forsthoefel et al., 2012
intestinal phagocyte	SMED30026282	h1SMcG0020675	Contig6657	uc_Smed_v2	PMID:23079596 Forsthoefel et al., 2012
prepharyngeal region	SMED30026282	h1SMcG0020675	SmedASXL_014139	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
parapharyngeal region	SMED30026282	h1SMcG0020675	SmedASXL_014139	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
epidermis	SMED30026282	h1SMcG0020675	dd_Smed_v4_15815_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30026282	h1SMcG0020675	dd_Smed_v4_15815_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parapharyngeal region	SMED30026282	h1SMcG0020675	dd_Smed_v6_15815_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
Match: CACNA1B (calcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389])

HSP 1 Score: 59.3066 bits (142), Expect = 8.337e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 8.337e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
Match: CACNA1B (calcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389])

HSP 1 Score: 59.3066 bits (142), Expect = 8.475e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 8.475e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
Match: CACNA1B (calcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389])

HSP 1 Score: 59.3066 bits (142), Expect = 8.615e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 8.615e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
Match: CACNA1B (calcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389])

HSP 1 Score: 59.3066 bits (142), Expect = 8.615e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 8.615e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
Match: CACNA1B (calcium voltage-gated channel subunit alpha1 B [Source:HGNC Symbol;Acc:HGNC:1389])

HSP 1 Score: 59.3066 bits (142), Expect = 9.831e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 9.831e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
Match: unc-2 (High voltage activated calcium channel alpha-1 subunit [Source:UniProtKB/TrEMBL;Acc:Q86G45])

HSP 1 Score: 47.3654 bits (111), Expect = 1.867e-12
Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN + G+ +N  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  454 TNDSLGSTYNWAYFIPLIVLGSFFMLNLVLGVLSG 488

HSP 2 Score: 40.817 bits (94), Expect = 1.867e-12
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++LKE+
Sbjct:  489 EFAKERERVENRREFLKLRRQQQIERELNGYLEWILTAEEVILKED 534

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
Match: unc-2 (High voltage activated calcium channel alpha-1 subunit [Source:UniProtKB/TrEMBL;Acc:Q86G45])

HSP 1 Score: 46.9802 bits (110), Expect = 1.897e-12
Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN + G+ +N  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  498 TNDSLGSTYNWAYFIPLIVLGSFFMLNLVLGVLSG 532

HSP 2 Score: 40.817 bits (94), Expect = 1.897e-12
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++LKE+
Sbjct:  533 EFAKERERVENRREFLKLRRQQQIERELNGYLEWILTAEEVILKED 578

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
Match: egl-19 (Voltage-dependent L-type calcium channel subunit alpha [Source:UniProtKB/TrEMBL;Acc:W6RY76])

HSP 1 Score: 43.8986 bits (102), Expect = 1.986e-12
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A G  W   Y+V+LV++GSFF+LNL+LGVLSG
Sbjct:  336 NDAVGREWPWIYFVTLVILGSFFVLNLVLGVLSG 369

HSP 2 Score: 43.8986 bits (102), Expect = 1.986e-12
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EF+KERE+   R  F K R+ + ++ +L+GYLDWI    +I    ED
Sbjct:  370 EFSKEREKARARGLFQKFREKQQLEEDLKGYLDWITQAEDIEPVNED 416

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
Match: unc-2 (High voltage activated calcium channel alpha-1 subunit [Source:UniProtKB/TrEMBL;Acc:Q86G45])

HSP 1 Score: 46.9802 bits (110), Expect = 2.198e-12
Identity = 20/35 (57.14%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN + G+ +N  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  446 TNDSLGSTYNWAYFIPLIVLGSFFMLNLVLGVLSG 480

HSP 2 Score: 40.817 bits (94), Expect = 2.198e-12
Identity = 25/46 (54.35%), Postives = 36/46 (78.26%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++LKE+
Sbjct:  481 EFAKERERVENRREFLKLRRQQQIERELNGYLEWILTAEEVILKED 526

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
Match: egl-19 (Voltage-dependent L-type calcium channel subunit alpha [Source:UniProtKB/TrEMBL;Acc:W6RY76])

HSP 1 Score: 43.8986 bits (102), Expect = 2.296e-12
Identity = 21/34 (61.76%), Postives = 27/34 (79.41%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A G  W   Y+V+LV++GSFF+LNL+LGVLSG
Sbjct:  336 NDAVGREWPWIYFVTLVILGSFFVLNLVLGVLSG 369

HSP 2 Score: 43.8986 bits (102), Expect = 2.296e-12
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EF+KERE+   R  F K R+ + ++ +L+GYLDWI    +I    ED
Sbjct:  370 EFSKEREKARARGLFQKFREKQQLEEDLKGYLDWITQAEDIEPVNED 416

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
Match: cac (gene:FBgn0263111 transcript:FBtr0307319)

HSP 1 Score: 56.9954 bits (136), Expect = 1.048e-16
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERE+VE RQ F+K+R+ + ++ EL GY++WI    E++L EE
Sbjct:  315 EFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEE 360

HSP 2 Score: 45.8246 bits (107), Expect = 1.048e-16
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G+ +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  280 TNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
Match: cac (gene:FBgn0263111 transcript:FBtr0307313)

HSP 1 Score: 56.9954 bits (136), Expect = 1.057e-16
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERE+VE RQ F+K+R+ + ++ EL GY++WI    E++L EE
Sbjct:  315 EFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEE 360

HSP 2 Score: 45.8246 bits (107), Expect = 1.057e-16
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G+ +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  280 TNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
Match: cac (gene:FBgn0263111 transcript:FBtr0307320)

HSP 1 Score: 56.9954 bits (136), Expect = 1.066e-16
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERE+VE RQ F+K+R+ + ++ EL GY++WI    E++L EE
Sbjct:  315 EFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEE 360

HSP 2 Score: 45.8246 bits (107), Expect = 1.066e-16
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G+ +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  280 TNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
Match: cac (gene:FBgn0263111 transcript:FBtr0307316)

HSP 1 Score: 56.9954 bits (136), Expect = 1.066e-16
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERE+VE RQ F+K+R+ + ++ EL GY++WI    E++L EE
Sbjct:  315 EFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEE 360

HSP 2 Score: 45.8246 bits (107), Expect = 1.066e-16
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G+ +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  280 TNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
Match: cac (gene:FBgn0263111 transcript:FBtr0307317)

HSP 1 Score: 56.9954 bits (136), Expect = 1.074e-16
Identity = 24/46 (52.17%), Postives = 35/46 (76.09%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEE 353
            EFAKERE+VE RQ F+K+R+ + ++ EL GY++WI    E++L EE
Sbjct:  315 EFAKEREKVENRQEFLKLRRQQQLERELNGYVEWICKAEEVILAEE 360

HSP 2 Score: 45.8246 bits (107), Expect = 1.074e-16
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G+ +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  280 TNDALGSAFNWIYFVPLIVIGSFFMLNLVLGVLSG 314

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Zebrafish
Match: cacna1bb (calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4])

HSP 1 Score: 63.929 bits (154), Expect = 2.876e-21
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  339 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 385

HSP 2 Score: 54.6842 bits (130), Expect = 2.876e-21
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  304 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 338

[Close]

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  339 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 385

HSP 2 Score: 54.6842 bits (130), Expect = 2.876e-21
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  304 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 338

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Zebrafish
Match: cacna1bb (calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4])

HSP 1 Score: 62.7734 bits (151), Expect = 1.070e-20
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  346 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 392

HSP 2 Score: 53.9138 bits (128), Expect = 1.070e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  311 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 345

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Zebrafish
Match: cacna1ba (calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44])

HSP 1 Score: 62.3882 bits (150), Expect = 1.750e-20
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  351 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEED 397

HSP 2 Score: 53.1434 bits (126), Expect = 1.750e-20
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  317 NDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 350

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Zebrafish
Match: cacna1ba (calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44])

HSP 1 Score: 62.3882 bits (150), Expect = 1.980e-20
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  351 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEED 397

HSP 2 Score: 53.1434 bits (126), Expect = 1.980e-20
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  317 NDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 350

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:Xenbase;Acc:XB-GENE-970920])

HSP 1 Score: 55.4546 bits (132), Expect = 6.746e-18
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GY  WI+   E++L EE+
Sbjct:  354 EFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEEN 400

HSP 2 Score: 51.9878 bits (123), Expect = 6.746e-18
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFF+LNL+LGVLSG
Sbjct:  319 TNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSG 353

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:Xenbase;Acc:XB-GENE-970920])

HSP 1 Score: 55.4546 bits (132), Expect = 7.087e-18
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GY  WI+   E++L EE+
Sbjct:  354 EFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEEN 400

HSP 2 Score: 51.9878 bits (123), Expect = 7.087e-18
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFF+LNL+LGVLSG
Sbjct:  319 TNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSG 353

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:Xenbase;Acc:XB-GENE-970920])

HSP 1 Score: 55.0694 bits (131), Expect = 7.815e-18
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GY  WI+   E++L EE+
Sbjct:  354 EFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEEN 400

HSP 2 Score: 51.9878 bits (123), Expect = 7.815e-18
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFF+LNL+LGVLSG
Sbjct:  319 TNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSG 353

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:Xenbase;Acc:XB-GENE-970920])

HSP 1 Score: 55.0694 bits (131), Expect = 8.344e-18
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GY  WI+   E++L EE+
Sbjct:  354 EFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEEN 400

HSP 2 Score: 51.9878 bits (123), Expect = 8.344e-18
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFF+LNL+LGVLSG
Sbjct:  319 TNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSG 353

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:Xenbase;Acc:XB-GENE-970920])

HSP 1 Score: 55.0694 bits (131), Expect = 8.702e-18
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GY  WI+   E++L EE+
Sbjct:  244 EFAKERERVENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEEN 290

HSP 2 Score: 51.9878 bits (123), Expect = 8.702e-18
Identity = 21/35 (60.00%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFF+LNL+LGVLSG
Sbjct:  209 TNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSG 243

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Mouse
Match: Cacna1b (calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:MGI Symbol;Acc:MGI:88296])

HSP 1 Score: 59.6918 bits (143), Expect = 4.937e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 4.937e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 4.937e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Mouse
Match: Cacna1b (calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:MGI Symbol;Acc:MGI:88296])

HSP 1 Score: 59.6918 bits (143), Expect = 4.939e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 4.939e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Mouse
Match: Cacna1b (calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:MGI Symbol;Acc:MGI:88296])

HSP 1 Score: 59.6918 bits (143), Expect = 4.978e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 4.978e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Mouse
Match: Cacna1b (calcium channel, voltage-dependent, N type, alpha 1B subunit [Source:MGI Symbol;Acc:MGI:88296])

HSP 1 Score: 59.6918 bits (143), Expect = 5.403e-20
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 5.403e-20
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
Match: sp|Q05152|CAC1B_RABIT (Voltage-dependent N-type calcium channel subunit alpha-1B OS=Oryctolagus cuniculus OX=9986 GN=CACNA1B PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.204e-19
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 3.204e-19
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
Match: sp|O55017|CAC1B_MOUSE (Voltage-dependent N-type calcium channel subunit alpha-1B OS=Mus musculus OX=10090 GN=Cacna1b PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.312e-19
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 3.312e-19
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
Match: sp|Q02294|CAC1B_RAT (Voltage-dependent N-type calcium channel subunit alpha-1B OS=Rattus norvegicus OX=10116 GN=Cacna1b PE=1 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 3.594e-19
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 3.594e-19
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
Match: sp|Q00975|CAC1B_HUMAN (Voltage-dependent N-type calcium channel subunit alpha-1B OS=Homo sapiens OX=9606 GN=CACNA1B PE=1 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 4.065e-19
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  358 EFAKERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEED 404

HSP 2 Score: 54.6842 bits (130), Expect = 4.065e-19
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  323 TNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 357

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
Match: sp|O00555|CAC1A_HUMAN (Voltage-dependent P/Q-type calcium channel subunit alpha-1A OS=Homo sapiens OX=9606 GN=CACNA1A PE=1 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 1.132e-18
Identity = 25/54 (46.30%), Postives = 38/54 (70.37%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEEDLPDLQRQ 377
            EFAKERERVE R+ F+K+R+ + ++ EL GY++WI    E++L E++    QR 
Sbjct:  362 EFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETDGEQRH 415

HSP 2 Score: 53.9138 bits (128), Expect = 1.132e-18
Identity = 21/35 (60.00%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            +N A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  327 SNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 361

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
Match: A0A4W4G6H3 (Voltage-dependent N-type calcium channel subunit alpha OS=Electrophorus electricus OX=8005 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 4.313e-18
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  352 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 398

HSP 2 Score: 54.299 bits (129), Expect = 4.313e-18
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  317 TNDASGNTWNWLYFIPLIILGSFFMLNLVLGVLSG 351

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
Match: A0A2I4CHI6 (Voltage-dependent N-type calcium channel subunit alpha OS=Austrofundulus limnaeus OX=52670 GN=LOC106528746 PE=3 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 4.959e-18
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  350 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEED 396

HSP 2 Score: 54.6842 bits (130), Expect = 4.959e-18
Identity = 22/34 (64.71%), Postives = 28/34 (82.35%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N ATG  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  316 NDATGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 349

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
Match: A0A3B4D8V7 (Voltage-dependent N-type calcium channel subunit alpha OS=Pygocentrus nattereri OX=42514 PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 5.306e-18
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  343 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 389

HSP 2 Score: 55.4546 bits (132), Expect = 5.306e-18
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  308 TNDASGNAWNWLYFIPLIIIGSFFMLNLVLGVLSG 342

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
Match: A0A3B4D981 (Voltage-dependent N-type calcium channel subunit alpha OS=Pygocentrus nattereri OX=42514 PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 5.340e-18
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  348 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 394

HSP 2 Score: 55.4546 bits (132), Expect = 5.340e-18
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  313 TNDASGNAWNWLYFIPLIIIGSFFMLNLVLGVLSG 347

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
Match: A0A4W4G2T6 (Voltage-dependent N-type calcium channel subunit alpha OS=Electrophorus electricus OX=8005 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 5.528e-18
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  349 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 395

HSP 2 Score: 54.299 bits (129), Expect = 5.528e-18
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  314 TNDASGNTWNWLYFIPLIILGSFFMLNLVLGVLSG 348

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
Match: cacna1bb (calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4])

HSP 1 Score: 62.3882 bits (150), Expect = 4.259e-21
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  341 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 387

HSP 2 Score: 55.0694 bits (131), Expect = 4.259e-21
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  306 TNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 340

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
Match: cacna1bb (calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4])

HSP 1 Score: 62.3882 bits (150), Expect = 4.365e-21
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  341 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 387

HSP 2 Score: 55.0694 bits (131), Expect = 4.365e-21
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  306 TNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 340

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
Match: cacna1bb (calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4])

HSP 1 Score: 62.3882 bits (150), Expect = 4.366e-21
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  341 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 387

HSP 2 Score: 55.0694 bits (131), Expect = 4.366e-21
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  306 TNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 340

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
Match: cacna1bb (calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4])

HSP 1 Score: 62.3882 bits (150), Expect = 4.438e-21
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E+LL EED
Sbjct:  341 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEED 387

HSP 2 Score: 55.0694 bits (131), Expect = 4.438e-21
Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  306 TNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 340

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
Match: cacna1ba (calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44])

HSP 1 Score: 62.7734 bits (151), Expect = 1.259e-20
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  341 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEED 387

HSP 2 Score: 53.1434 bits (126), Expect = 1.259e-20
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  307 NDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 340

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Sea Lamprey
Match: ENSPMAT00000004641.1 (pep scaffold:Pmarinus_7.0:GL484016:2326:11357:-1 gene:ENSPMAG00000004230.1 transcript:ENSPMAT00000004641.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 51.9878 bits (123), Expect = 4.808e-12
Identity = 26/47 (55.32%), Postives = 36/47 (76.60%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R+ F+K+R+ + +  EL GYL+WI    E++L+EED
Sbjct:  153 EFAKERERVENRRAFLKLRRQQQLDRELNGYLEWICKAEEVMLEEED 199

HSP 2 Score: 33.113 bits (74), Expect = 4.808e-12
Identity = 13/29 (44.83%), Postives = 20/29 (68.97%), Query Frame = 2

Query:   74 ATGTPWNNFYYVSLVLVGSFFMLNLILGV 160
            A G  WN  Y++ L+++GSFF LN+  G+
Sbjct:  121 ALGNTWNWLYFIPLIIIGSFFTLNICHGL 149

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003253.1 (pep scaffold:Pmarinus_7.0:GL478330:685:47673:1 gene:ENSPMAG00000002915.1 transcript:ENSPMAT00000003253.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 55.0694 bits (131), Expect = 3.363e-10
Identity = 26/48 (54.17%), Postives = 37/48 (77.08%), Query Frame = 3

Query:  213 REFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            REFAKERERVE R+ F+K+R+ + ++ EL GY++WI    E++L EED
Sbjct:    4 REFAKERERVENRRAFLKLRRQQQIERELNGYMEWICKAEEVMLAEED 51

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Nematostella
Match: EDO46991 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RNU9])

HSP 1 Score: 45.0542 bits (105), Expect = 1.295e-11
Identity = 20/34 (58.82%), Postives = 26/34 (76.47%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A G  W   Y+V+L++ GSFF+LNL+LGVLSG
Sbjct:  312 NDAIGNSWPWLYFVTLIIWGSFFVLNLVLGVLSG 345

HSP 2 Score: 38.891 bits (89), Expect = 1.295e-11
Identity = 17/41 (41.46%), Postives = 25/41 (60.98%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEI 338
            EFAKE+ R +K   F K+R+ +++     GYLDWI    +I
Sbjct:  346 EFAKEKARAQKSGEFQKLREKQLVDDAYHGYLDWISQAEDI 386

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
Match: cacna1ba (voltage-dependent N-type calcium channel subunit alpha-1B [Source:NCBI gene;Acc:101157063])

HSP 1 Score: 62.7734 bits (151), Expect = 1.366e-20
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI    E++L EED
Sbjct:  350 EFAKERERVEKRQEFLKLRRQQQIEKELTGYLEWICKAEEVMLAEED 396

HSP 2 Score: 53.1434 bits (126), Expect = 1.366e-20
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 2

Query:   68 NFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            N A+G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  316 NDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 349

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
Match: cacna1aa (voltage-dependent P/Q-type calcium channel subunit alpha-1A [Source:NCBI gene;Acc:101170273])

HSP 1 Score: 54.6842 bits (130), Expect = 1.474e-18
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R  F+K+R+ + ++ EL GYL+WI    E++L +++
Sbjct:  258 EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILADDE 304

HSP 2 Score: 54.299 bits (129), Expect = 1.474e-18
Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            +N A+G+ WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  223 SNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSG 257

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
Match: cacna1aa (voltage-dependent P/Q-type calcium channel subunit alpha-1A [Source:NCBI gene;Acc:101170273])

HSP 1 Score: 54.6842 bits (130), Expect = 1.535e-18
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R  F+K+R+ + ++ EL GYL+WI    E++L +++
Sbjct:  258 EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILADDE 304

HSP 2 Score: 54.299 bits (129), Expect = 1.535e-18
Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            +N A+G+ WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  223 SNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSG 257

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
Match: cacna1aa (voltage-dependent P/Q-type calcium channel subunit alpha-1A [Source:NCBI gene;Acc:101170273])

HSP 1 Score: 54.6842 bits (130), Expect = 1.626e-18
Identity = 23/47 (48.94%), Postives = 35/47 (74.47%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKEED 356
            EFAKERERVE R  F+K+R+ + ++ EL GYL+WI    E++L +++
Sbjct:  258 EFAKERERVENRSEFLKLRRQQQIERELNGYLEWICKAEEVILADDE 304

HSP 2 Score: 54.299 bits (129), Expect = 1.626e-18
Identity = 21/35 (60.00%), Postives = 30/35 (85.71%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            +N A+G+ WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  223 SNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSG 257

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
Match: cacna1bb (voltage-dependent N-type calcium channel subunit alpha-1B [Source:NCBI gene;Acc:101167885])

HSP 1 Score: 55.0694 bits (131), Expect = 3.720e-18
Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWI 320
            EFAKERERVEKRQ F+K+R+ + ++ EL GYL+WI
Sbjct:  354 EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWI 388

HSP 2 Score: 52.7582 bits (125), Expect = 3.720e-18
Identity = 21/35 (60.00%), Postives = 27/35 (77.14%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN   G  WN  Y++ L+++GSFFMLNL+LGVLSG
Sbjct:  319 TNDVVGNTWNWLYFIPLIIIGSFFMLNLVLGVLSG 353

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST
Match: SMESG000028279.1 (SMESG000028279.1)

HSP 1 Score: 58.151 bits (139), Expect = 9.941e-18
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKE 350
            EFAKERERVEKR+ F+K+R+ +  + E  GY++WI+   E+LL E
Sbjct:  220 EFAKERERVEKRRAFLKLRRQQQTEKEFNGYMEWIQKAEEVLLNE 264

HSP 2 Score: 47.7506 bits (112), Expect = 9.941e-18
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  185 TNDAIGNRFNWLYFVPLIILGSFFMLNLVLGVLSG 219

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST
Match: SMESG000028279.1 (SMESG000028279.1)

HSP 1 Score: 58.151 bits (139), Expect = 1.142e-17
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKE 350
            EFAKERERVEKR+ F+K+R+ +  + E  GY++WI+   E+LL E
Sbjct:  256 EFAKERERVEKRRAFLKLRRQQQTEKEFNGYMEWIQKAEEVLLNE 300

HSP 2 Score: 47.3654 bits (111), Expect = 1.142e-17
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  221 TNDAIGNRFNWLYFVPLIILGSFFMLNLVLGVLSG 255

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST
Match: SMESG000028279.1 (SMESG000028279.1)

HSP 1 Score: 58.151 bits (139), Expect = 1.151e-17
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKE 350
            EFAKERERVEKR+ F+K+R+ +  + E  GY++WI+   E+LL E
Sbjct:  256 EFAKERERVEKRRAFLKLRRQQQTEKEFNGYMEWIQKAEEVLLNE 300

HSP 2 Score: 47.3654 bits (111), Expect = 1.151e-17
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  221 TNDAIGNRFNWLYFVPLIILGSFFMLNLVLGVLSG 255

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST
Match: SMESG000028279.1 (SMESG000028279.1)

HSP 1 Score: 58.151 bits (139), Expect = 1.180e-17
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKE 350
            EFAKERERVEKR+ F+K+R+ +  + E  GY++WI+   E+LL E
Sbjct:  278 EFAKERERVEKRRAFLKLRRQQQTEKEFNGYMEWIQKAEEVLLNE 322

HSP 2 Score: 47.3654 bits (111), Expect = 1.180e-17
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  243 TNDAIGNRFNWLYFVPLIILGSFFMLNLVLGVLSG 277

[Close]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST
Match: SMESG000028279.1 (SMESG000028279.1)

HSP 1 Score: 58.151 bits (139), Expect = 1.199e-17
Identity = 24/45 (53.33%), Postives = 34/45 (75.56%), Query Frame = 3

Query:  216 EFAKERERVEKRQTFIKVRQTKIMQMELEGYLDWIEAYGEILLKE 350
            EFAKERERVEKR+ F+K+R+ +  + E  GY++WI+   E+LL E
Sbjct:  293 EFAKERERVEKRRAFLKLRRQQQTEKEFNGYMEWIQKAEEVLLNE 337

HSP 2 Score: 47.3654 bits (111), Expect = 1.199e-17
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 2

Query:   65 TNFATGTPWNNFYYVSLVLVGSFFMLNLILGVLSG 169
            TN A G  +N  Y+V L+++GSFFMLNL+LGVLSG
Sbjct:  258 TNDAIGNRFNWLYFVPLIILGSFFMLNLVLGVLSG 292

The following BLAST results are available for this feature:

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Zebrafish
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Mouse
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Sea Lamprey
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Yeast
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Nematostella
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
CACNA1B	8.337e-20	55.32	calcium voltage-gated channel subunit alpha1 B [So...	[more]
CACNA1B	8.475e-20	55.32	calcium voltage-gated channel subunit alpha1 B [So...	[more]
CACNA1B	8.615e-20	55.32	calcium voltage-gated channel subunit alpha1 B [So...	[more]
CACNA1B	8.615e-20	55.32	calcium voltage-gated channel subunit alpha1 B [So...	[more]
CACNA1B	9.831e-20	55.32	calcium voltage-gated channel subunit alpha1 B [So...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
unc-2	1.867e-12	57.14	High voltage activated calcium channel alpha-1 sub...	[more]
unc-2	1.897e-12	57.14	High voltage activated calcium channel alpha-1 sub...	[more]
egl-19	1.986e-12	61.76	Voltage-dependent L-type calcium channel subunit a...	[more]
unc-2	2.198e-12	57.14	High voltage activated calcium channel alpha-1 sub...	[more]
egl-19	2.296e-12	61.76	Voltage-dependent L-type calcium channel subunit a...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cac	1.048e-16	52.17	gene:FBgn0263111 transcript:FBtr0307319	[more]
cac	1.057e-16	52.17	gene:FBgn0263111 transcript:FBtr0307313	[more]
cac	1.066e-16	52.17	gene:FBgn0263111 transcript:FBtr0307320	[more]
cac	1.066e-16	52.17	gene:FBgn0263111 transcript:FBtr0307316	[more]
cac	1.074e-16	52.17	gene:FBgn0263111 transcript:FBtr0307317	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cacna1bb	2.876e-21	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1bb	2.876e-21	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1bb	1.070e-20	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1ba	1.750e-20	59.57	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1ba	1.980e-20	59.57	calcium channel, voltage-dependent, N type, alpha ...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mrps11	6.746e-18	51.06	mitochondrial ribosomal protein S11 [Source:Xenbas...	[more]
mrps11	7.087e-18	51.06	mitochondrial ribosomal protein S11 [Source:Xenbas...	[more]
mrps11	7.815e-18	51.06	mitochondrial ribosomal protein S11 [Source:Xenbas...	[more]
mrps11	8.344e-18	51.06	mitochondrial ribosomal protein S11 [Source:Xenbas...	[more]
mrps11	8.702e-18	51.06	mitochondrial ribosomal protein S11 [Source:Xenbas...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Cacna1b	4.937e-20	55.32	calcium channel, voltage-dependent, N type, alpha ...	[more]
Cacna1b	4.937e-20	55.32	calcium channel, voltage-dependent, N type, alpha ...	[more]
Cacna1b	4.939e-20	55.32	calcium channel, voltage-dependent, N type, alpha ...	[more]
Cacna1b	4.978e-20	55.32	calcium channel, voltage-dependent, N type, alpha ...	[more]
Cacna1b	5.403e-20	55.32	calcium channel, voltage-dependent, N type, alpha ...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q05152\|CAC1B_RABIT	3.204e-19	55.32	Voltage-dependent N-type calcium channel subunit a...	[more]
sp\|O55017\|CAC1B_MOUSE	3.312e-19	55.32	Voltage-dependent N-type calcium channel subunit a...	[more]
sp\|Q02294\|CAC1B_RAT	3.594e-19	55.32	Voltage-dependent N-type calcium channel subunit a...	[more]
sp\|Q00975\|CAC1B_HUMAN	4.065e-19	55.32	Voltage-dependent N-type calcium channel subunit a...	[more]
sp\|O00555\|CAC1A_HUMAN	1.132e-18	46.30	Voltage-dependent P/Q-type calcium channel subunit...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4W4G6H3	4.313e-18	61.70	Voltage-dependent N-type calcium channel subunit a...	[more]
A0A2I4CHI6	4.959e-18	59.57	Voltage-dependent N-type calcium channel subunit a...	[more]
A0A3B4D8V7	5.306e-18	61.70	Voltage-dependent N-type calcium channel subunit a...	[more]
A0A3B4D981	5.340e-18	61.70	Voltage-dependent N-type calcium channel subunit a...	[more]
A0A4W4G2T6	5.528e-18	61.70	Voltage-dependent N-type calcium channel subunit a...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cacna1bb	4.259e-21	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1bb	4.365e-21	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1bb	4.366e-21	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1bb	4.438e-21	61.70	calcium channel, voltage-dependent, N type, alpha ...	[more]
cacna1ba	1.259e-20	59.57	calcium channel, voltage-dependent, N type, alpha ...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSPMAT00000004641.1	4.808e-12	55.32	pep scaffold:Pmarinus_7.0:GL484016:2326:11357:-1 g...	[more]
ENSPMAT00000003253.1	3.363e-10	54.17	pep scaffold:Pmarinus_7.0:GL478330:685:47673:1 gen...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO46991	1.295e-11	58.82	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cacna1ba	1.366e-20	59.57	voltage-dependent N-type calcium channel subunit a...	[more]
cacna1aa	1.474e-18	48.94	voltage-dependent P/Q-type calcium channel subunit...	[more]
cacna1aa	1.535e-18	48.94	voltage-dependent P/Q-type calcium channel subunit...	[more]
cacna1aa	1.626e-18	48.94	voltage-dependent P/Q-type calcium channel subunit...	[more]
cacna1bb	3.720e-18	65.71	voltage-dependent N-type calcium channel subunit a...	[more]

BLAST of Voltage-dependent N-type calcium channel subunit alpha vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000028279.1	9.941e-18	53.33	SMESG000028279.1	[more]
SMESG000028279.1	1.142e-17	53.33	SMESG000028279.1	[more]
SMESG000028279.1	1.151e-17	53.33	SMESG000028279.1	[more]
SMESG000028279.1	1.180e-17	53.33	SMESG000028279.1	[more]
SMESG000028279.1	1.199e-17	53.33	SMESG000028279.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence

transcript sequence

>SMED30026282 ID=SMED30026282|Name=Voltage-dependent N-type calcium channel subunit alpha|organism=Schmidtea mediterranea sexual|type=transcript|length=377bp
TCGGTTAACTTTTCGGAGAGAATTTTCTATATATTTATTTTTGTAAATGA
TCAATTGAATTTAGACTAATTTTGCGACTGGAACTCCTTGGAACAATTTT
TATTACGTGAGTTTGGTTTTGGTTGGCTCATTTTTTATGTTAAACTTGAT
TCTGGGAGTTTTGAGTGGGTGAGTTATTTTCTTGCGATTGATGAACGATT
TATTCTTCTTTTAGGGAATTTGCCAAAGAAAGAGAAAGAGTTGAAAAGCG
ACAAACCTTTATTAAAGTTCGACAAACTAAAATCATGCAGATGGAATTGG
AAGGCTATCTAGATTGGATTGAGGCCTATGGAGAGATTCTGCTAAAGGAA
GAAGATCTTCCAGACCTTCAACGGCAA

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000070	intestinal phagocyte

Vocabulary: **biological process**
Term	Definition
GO:0034765	regulation of ion transmembrane transport
GO:0055085	transmembrane transport
GO:0070588	calcium ion transmembrane transport
GO:0006811	ion transport
GO:0006816	calcium ion transport

Vocabulary: **molecular function**
Term	Definition
GO:0005216	ion channel activity
GO:0005244	voltage-gated ion channel activity
GO:0005245	voltage-gated calcium channel activity
GO:0005262	calcium channel activity

Vocabulary: **cellular component**
Term	Definition
GO:0005891	voltage-gated calcium channel complex
GO:0016020	membrane
GO:0016021	integral component of membrane

Main menu

Voltage-dependent N-type calcium channel subunit alpha

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Owlery

blazegraph-runner