40S ribosomal protein S5

Overview
Name40S ribosomal protein S5
Smed IDSMED30026093
Length (bp)670
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of 40S ribosomal protein S5 (SMED30026093) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S5 (SMED30026093) in cells (dots) of each of the 12 neoblast clusters.

 

back to top

 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S5 (SMED30026093) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S5 (SMED30026093) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top

 

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020



SMED30026093

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 13

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
gutSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
epidermisSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymaSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
non-ciliated neuronSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cilated neuronSMED30026093h1SMcG0013920 dd_Smed_v4_295_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
progenitor cellSMED30026093h1SMcG0013920 dd_Smed_v6_295_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30026093h1SMcG0013920 dd_Smed_v6_295_0dd_Smed_v6PMID:29674432
Plass et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Human
Match: RPS5 (ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426])

HSP 1 Score: 297.745 bits (761), Expect = 4.834e-103
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Human
Match: RPS5 (ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426])

HSP 1 Score: 297.745 bits (761), Expect = 4.834e-103
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Human
Match: RPS5 (ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426])

HSP 1 Score: 297.745 bits (761), Expect = 4.834e-103
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Human
Match: RPS5 (ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426])

HSP 1 Score: 290.041 bits (741), Expect = 4.658e-100
Identity = 142/188 (75.53%), Postives = 160/188 (85.11%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVA 624
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVA
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVA 200
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Human
Match: RPS5 (ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:10426])

HSP 1 Score: 285.804 bits (730), Expect = 5.696e-98
Identity = 146/213 (68.54%), Postives = 164/213 (77.00%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSL---------------------TDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL                      DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQMTTTSVMRGLLHQKEHHISHMDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 225
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Celegans
Match: rps-5 (40S ribosomal protein S5 [Source:UniProtKB/Swiss-Prot;Acc:P49041])

HSP 1 Score: 280.411 bits (716), Expect = 1.700e-96
Identity = 136/192 (70.83%), Postives = 161/192 (83.85%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +  +  LF KWS   V+ +D+SL DYI    K AK +PHSAGR+Q +RFRKA CPIVER A SLMMHGRNNGKK+    I+KHAFE+++L+TGENP+Q ++NA+ NSG REDSTRIGR G V+RQAVDV+PLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   19 EAPEVALFGKWSLQSVNVSDISLVDYIPVKEKSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 210
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Fly
Match: RpS5a (gene:FBgn0002590 transcript:FBtr0345132)

HSP 1 Score: 288.5 bits (737), Expect = 2.692e-99
Identity = 141/194 (72.68%), Postives = 165/194 (85.05%), Query Frame = 1 
Query:   55 TMDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            T +  + KLF +WS DDV   D+SL DYI+   K+A+ +PHSAGRY  KRFRKAQCPIVER  CSLMM GRNNGKK+ A  I+KH+FE++HL+TGENP+Q +++AI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   35 TTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Fly
Match: RpS5a (gene:FBgn0002590 transcript:FBtr0343292)

HSP 1 Score: 288.5 bits (737), Expect = 2.692e-99
Identity = 141/194 (72.68%), Postives = 165/194 (85.05%), Query Frame = 1 
Query:   55 TMDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            T +  + KLF +WS DDV   D+SL DYI+   K+A+ +PHSAGRY  KRFRKAQCPIVER  CSLMM GRNNGKK+ A  I+KH+FE++HL+TGENP+Q +++AI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   35 TTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Fly
Match: RpS5a (gene:FBgn0002590 transcript:FBtr0343293)

HSP 1 Score: 288.5 bits (737), Expect = 2.692e-99
Identity = 141/194 (72.68%), Postives = 165/194 (85.05%), Query Frame = 1 
Query:   55 TMDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            T +  + KLF +WS DDV   D+SL DYI+   K+A+ +PHSAGRY  KRFRKAQCPIVER  CSLMM GRNNGKK+ A  I+KH+FE++HL+TGENP+Q +++AI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   35 TTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Fly
Match: RpS5a (gene:FBgn0002590 transcript:FBtr0074406)

HSP 1 Score: 288.5 bits (737), Expect = 2.692e-99
Identity = 141/194 (72.68%), Postives = 165/194 (85.05%), Query Frame = 1 
Query:   55 TMDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            T +  + KLF +WS DDV   D+SL DYI+   K+A+ +PHSAGRY  KRFRKAQCPIVER  CSLMM GRNNGKK+ A  I+KH+FE++HL+TGENP+Q +++AI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   35 TTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Fly
Match: RpS5b (gene:FBgn0038277 transcript:FBtr0083006)

HSP 1 Score: 277.33 bits (708), Expect = 7.309e-95
Identity = 134/189 (70.90%), Postives = 159/189 (84.13%), Query Frame = 1 
Query:   70 DFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            + KLF +W+ DD+  +D+SL DYI    K+A+ +PHSAGRY  KRFRKAQCPIVER    LMM GR+NGKK+ A  I+KHAFE++HL+T ENP+Q  +NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI L+CTG+REA+FRN KT+AECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   42 EIKLFGRWACDDISISDISLQDYIAVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 230
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Zebrafish
Match: rps5 (ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12])

HSP 1 Score: 293.893 bits (751), Expect = 1.273e-101
Identity = 144/192 (75.00%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T + KLF KWSTDDV   D+SL DYI    KYAK +PHS+GRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPEIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSSGRYAAKRFRKAQCPIVERVTNSMMMHGRNNGKKLLTVRIVKHAFEIIHLLTGENPLQILVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Zebrafish
Match: rps5 (ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020419-12])

HSP 1 Score: 293.893 bits (751), Expect = 1.273e-101
Identity = 144/192 (75.00%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T + KLF KWSTDDV   D+SL DYI    KYAK +PHS+GRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPEIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSSGRYAAKRFRKAQCPIVERVTNSMMMHGRNNGKKLLTVRIVKHAFEIIHLLTGENPLQILVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Xenopus
Match: rps5 (ribosomal protein S5 [Source:NCBI gene;Acc:549746])

HSP 1 Score: 296.204 bits (757), Expect = 1.777e-102
Identity = 145/192 (75.52%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T + KLF KWSTDDV   D+SL DYI    KYAK +PHS GRY  KRFRKAQCPIVERF  SLMMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAEC++DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   12 ETPEIKLFGKWSTDDVQINDISLQDYIAVKEKYAKFLPHSGGRYAAKRFRKAQCPIVERFTNSLMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR 203
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Mouse
Match: Rps5 (ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682])

HSP 1 Score: 297.745 bits (761), Expect = 3.319e-103
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Mouse
Match: Rps5 (ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682])

HSP 1 Score: 297.745 bits (761), Expect = 3.319e-103
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Mouse
Match: Rps5 (ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682])

HSP 1 Score: 268.855 bits (686), Expect = 5.651e-92
Identity = 131/177 (74.01%), Postives = 149/177 (84.18%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYA 591
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYA
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYA 189
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Mouse
Match: Rps5 (ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:1097682])

HSP 1 Score: 254.988 bits (650), Expect = 1.391e-86
Identity = 124/170 (72.94%), Postives = 142/170 (83.53%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASK 570
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+K
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAK 182
[Close]
BLAST of 40S ribosomal protein S5 vs. UniProt/SwissProt
Match: sp|P46782|RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens OX=9606 GN=RPS5 PE=1 SV=4)

HSP 1 Score: 297.745 bits (761), Expect = 2.321e-102
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. UniProt/SwissProt
Match: sp|Q5E988|RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus OX=9913 GN=RPS5 PE=2 SV=3)

HSP 1 Score: 297.745 bits (761), Expect = 2.321e-102
Identity = 146/192 (76.04%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. UniProt/SwissProt
Match: sp|P97461|RS5_MOUSE (40S ribosomal protein S5 OS=Mus musculus OX=10090 GN=Rps5 PE=1 SV=3)

HSP 1 Score: 295.819 bits (756), Expect = 1.703e-101
Identity = 145/192 (75.52%), Postives = 163/192 (84.90%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN K IAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKNIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. UniProt/SwissProt
Match: sp|P24050|RS5_RAT (40S ribosomal protein S5 OS=Rattus norvegicus OX=10116 GN=Rps5 PE=1 SV=3)

HSP 1 Score: 291.582 bits (745), Expect = 8.039e-100
Identity = 144/192 (75.00%), Postives = 161/192 (83.85%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV   D+SL DYI    KYAK +PHSAGRY    FRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA KGSSNSYAIKKKDELERVAKSNR
Sbjct:   13 ETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAANGFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINARKGSSNSYAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. UniProt/SwissProt
Match: sp|Q24186|RS5A_DROME (40S ribosomal protein S5a OS=Drosophila melanogaster OX=7227 GN=RpS5a PE=1 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.699e-98
Identity = 141/194 (72.68%), Postives = 165/194 (85.05%), Query Frame = 1 
Query:   55 TMDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            T +  + KLF +WS DDV   D+SL DYI+   K+A+ +PHSAGRY  KRFRKAQCPIVER  CSLMM GRNNGKK+ A  I+KH+FE++HL+TGENP+Q +++AI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   35 TTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIVERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 228
[Close]
BLAST of 40S ribosomal protein S5 vs. TrEMBL
Match: A0A210PU23 (40S ribosomal protein S5 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT04279 PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 4.423e-102
Identity = 148/194 (76.29%), Postives = 170/194 (87.63%), Query Frame = 1 
Query:   55 TMDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            T +  + KLF+KWS+DDV  +D+SLTDYI    KYAK +PHS+GRYQ KRFRKAQCPIVER  CSLMMHGRNNGKK+ A  I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REASFRN KTIAECL+DELINA+KGSSNS+AIKKKDELERVAKSNR
Sbjct:   12 TAELPEIKLFSKWSSDDVQVSDISLTDYIAVKEKYAKYLPHSSGRYQVKRFRKAQCPIVERLTCSLMMHGRNNGKKLMAMRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREASFRNIKTIAECLADELINAAKGSSNSHAIKKKDELERVAKSNR 205
[Close]
BLAST of 40S ribosomal protein S5 vs. TrEMBL
Match: Q4H451 (Ribosomal protein S5 OS=Crassostrea gigas OX=29159 PE=2 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.012e-100
Identity = 145/193 (75.13%), Postives = 168/193 (87.05%), Query Frame = 1 
Query:   58 MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            ++  + KLF KWS+DDV  +D+SLTDYI    KYAK +PHS+GRYQ KRFRK+QCPIVER  CSLMMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REASFRN KTIAECL+DELINA+KGSSNS+AIKKKDELERVAKSNR
Sbjct:   12 VELPEIKLFGKWSSDDVQVSDISLTDYIAVKEKYAKYLPHSSGRYQVKRFRKSQCPIVERLTCSLMMHGRNNGKKLLTTRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREASFRNIKTIAECLADELINAAKGSSNSHAIKKKDELERVAKSNR 204
[Close]
BLAST of 40S ribosomal protein S5 vs. TrEMBL
Match: Q70ML8 (Ribosomal protein S5 (Fragment) OS=Crassostrea gigas OX=29159 GN=rps5 PE=2 SV=1)

HSP 1 Score: 299.671 bits (766), Expect = 1.463e-100
Identity = 145/193 (75.13%), Postives = 168/193 (87.05%), Query Frame = 1 
Query:   58 MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            ++  + KLF KWS+DDV  +D+SLTDYI    KYAK +PHS+GRYQ KRFRK+QCPIVER  CSLMMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REASFRN KTIAECL+DELINA+KGSSNS+AIKKKDELERVAKSNR
Sbjct:   16 VELPEIKLFGKWSSDDVQVSDISLTDYIAVKEKYAKYLPHSSGRYQVKRFRKSQCPIVERLTCSLMMHGRNNGKKLLTTRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREASFRNIKTIAECLADELINAAKGSSNSHAIKKKDELERVAKSNR 208
[Close]
BLAST of 40S ribosomal protein S5 vs. TrEMBL
Match: G1KKR6 (Ribosomal protein S5 OS=Anolis carolinensis OX=28377 GN=RPS5 PE=3 SV=1)

HSP 1 Score: 298.13 bits (762), Expect = 4.734e-100
Identity = 147/192 (76.56%), Postives = 165/192 (85.94%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV  +D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    IIKHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   12 ETPDIKLFGKWSTDDVQISDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIIKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 203
[Close]
BLAST of 40S ribosomal protein S5 vs. TrEMBL
Match: A0A1W7RDR2 (40S ribosomal protein S5 OS=Agkistrodon contortrix contortrix OX=8713 PE=3 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 6.721e-100
Identity = 147/192 (76.56%), Postives = 165/192 (85.94%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T D KLF KWSTDDV  +D+SL DYI    KYAK +PHSAGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    IIKHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   12 ETPDIKLFGKWSTDDVQISDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIIKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 203
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Cavefish
Match: rps5 (ribosomal protein S5 [Source:NCBI gene;Acc:103040815])

HSP 1 Score: 293.893 bits (751), Expect = 9.977e-102
Identity = 143/192 (74.48%), Postives = 163/192 (84.90%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T + KLF KWSTDDV   D+SL DY+    KYAK +PHS GRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   12 ETPEIKLFGKWSTDDVQINDISLQDYVAVKEKYAKYLPHSGGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 203
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Yeast
Match: RPS5 (Protein component of the small (40S) ribosomal subunit; least basic of non-acidic ribosomal proteins; phosphorylated in vivo; essential for viability; homologous to mammalian ribosomal protein S5 and bacterial S7 [Source:SGD;Acc:S000003884])

HSP 1 Score: 243.432 bits (620), Expect = 2.106e-82
Identity = 122/190 (64.21%), Postives = 155/190 (81.58%), Query Frame = 1 
Query:   67 SDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            ++ KLFNKWS ++V   D SL DY+    +    + H+AGRY  KRFRKAQCPI+ER   SLMM+GRNNGKK+KA  IIKH  ++++++T +NPIQ +++AI+N+G RED+TR+G GGA +RQAVDVSPLRRVN+AI+LL  G+REA+FRN KTIAE L++ELINA+KGSS SYAIKKKDELERVAKSNR
Sbjct:   38 TEIKLFNKWSFEEVEVKDASLVDYVQV--RQPIFVAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAETLAEELINAAKGSSTSYAIKKKDELERVAKSNR 225
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Nematostella
Match: EDO47235 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RMZ3])

HSP 1 Score: 287.73 bits (735), Expect = 9.885e-100
Identity = 140/192 (72.92%), Postives = 164/192 (85.42%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +  D KLF KWST+DV  +D+SLTDYI    KY+  +PH+AGRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    IIKH+FE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+RE++FRN K+IAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   18 EVPDIKLFGKWSTEDVQVSDISLTDYIAVKEKYSTYLPHTAGRYAAKRFRKAQCPIVERITNSMMMHGRNNGKKLMTVRIIKHSFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGARESAFRNIKSIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 209
[Close]
BLAST of 40S ribosomal protein S5 vs. Ensembl Medaka
Match: rps5 (ribosomal protein S5 [Source:NCBI gene;Acc:101159114])

HSP 1 Score: 294.278 bits (752), Expect = 6.685e-102
Identity = 144/192 (75.00%), Postives = 163/192 (84.90%), Query Frame = 1 
Query:   61 DTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            +T + KLF KWSTDDV   D+SL DYI    KYAK +PHS GRY  KRFRKAQCPIVER   S+MMHGRNNGKK+    I+KHAFE++HL+TGENP+Q ++NAI NSG REDSTRIGR G V+RQAVDVSPLRRVN+AI LLCTG+REA+FRN KTIAECL+DELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:   12 ETPEIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSGGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERVAKSNR 203
[Close]
BLAST of 40S ribosomal protein S5 vs. Planmine SMEST
Match: SMESG000076086.1 (SMESG000076086.1)

HSP 1 Score: 373.244 bits (957), Expect = 1.986e-133
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1 
Query:   58 MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRNNGKKIKANNIIKHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR
Sbjct:    1 MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRNNGKKIKANNIIKHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 193
[Close]
BLAST of 40S ribosomal protein S5 vs. Planmine SMEST
Match: SMESG000061113.1 (SMESG000061113.1)

HSP 1 Score: 348.977 bits (894), Expect = 7.258e-124
Identity = 180/193 (93.26%), Postives = 188/193 (97.41%), Query Frame = 1 
Query:   58 MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRFRKAQCPIVERFACSLMMHGRXXXXXXXXXXXXXHAFELMHLMTGENPIQTMINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREASFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR 636
            MD+SDFKL+NKWST+DV T+DLSLTDYINYSGKYAKIIPHSAGR+QTKRFRKAQCPIVERF  SLMMHGRNNGKKIKANNIIKHAFEL+HLMTGENPIQ M+NAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLC GSREASFRNTKTIAECLSDELINA+KGSSNSYAIKKKDELERVAKSNR
Sbjct:    1 MDSSDFKLYNKWSTEDVTTSDLSLTDYINYSGKYAKIIPHSAGRFQTKRFRKAQCPIVERFCNSLMMHGRNNGKKIKANNIIKHAFELIHLMTGENPIQVMVNAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCQGSREASFRNTKTIAECLSDELINAAKGSSNSYAIKKKDELERVAKSNR 193
The following BLAST results are available for this feature:
BLAST of 40S ribosomal protein S5 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RPS54.834e-10376.04ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS54.834e-10376.04ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS54.834e-10376.04ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS54.658e-10075.53ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:... [more]
RPS55.696e-9868.54ribosomal protein S5 [Source:HGNC Symbol;Acc:HGNC:... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps-51.700e-9670.8340S ribosomal protein S5 [Source:UniProtKB/Swiss-... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
RpS5a2.692e-9972.68gene:FBgn0002590 transcript:FBtr0345132[more]
RpS5a2.692e-9972.68gene:FBgn0002590 transcript:FBtr0343292[more]
RpS5a2.692e-9972.68gene:FBgn0002590 transcript:FBtr0343293[more]
RpS5a2.692e-9972.68gene:FBgn0002590 transcript:FBtr0074406[more]
RpS5b7.309e-9570.90gene:FBgn0038277 transcript:FBtr0083006[more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
rps51.273e-10175.00ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020... [more]
rps51.273e-10175.00ribosomal protein S5 [Source:ZFIN;Acc:ZDB-GENE-020... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps51.777e-10275.52ribosomal protein S5 [Source:NCBI gene;Acc:549746][more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4
Match NameE-valueIdentityDescription
Rps53.319e-10376.04ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:10... [more]
Rps53.319e-10376.04ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:10... [more]
Rps55.651e-9274.01ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:10... [more]
Rps51.391e-8672.94ribosomal protein S5 [Source:MGI Symbol;Acc:MGI:10... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P46782|RS5_HUMAN2.321e-10276.0440S ribosomal protein S5 OS=Homo sapiens OX=9606 G... [more]
sp|Q5E988|RS5_BOVIN2.321e-10276.0440S ribosomal protein S5 OS=Bos taurus OX=9913 GN=... [more]
sp|P97461|RS5_MOUSE1.703e-10175.5240S ribosomal protein S5 OS=Mus musculus OX=10090 ... [more]
sp|P24050|RS5_RAT8.039e-10075.0040S ribosomal protein S5 OS=Rattus norvegicus OX=1... [more]
sp|Q24186|RS5A_DROME2.699e-9872.6840S ribosomal protein S5a OS=Drosophila melanogast... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210PU234.423e-10276.2940S ribosomal protein S5 OS=Mizuhopecten yessoensi... [more]
Q4H4511.012e-10075.13Ribosomal protein S5 OS=Crassostrea gigas OX=29159... [more]
Q70ML81.463e-10075.13Ribosomal protein S5 (Fragment) OS=Crassostrea gig... [more]
G1KKR64.734e-10076.56Ribosomal protein S5 OS=Anolis carolinensis OX=283... [more]
A0A1W7RDR26.721e-10076.5640S ribosomal protein S5 OS=Agkistrodon contortrix... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps59.977e-10274.48ribosomal protein S5 [Source:NCBI gene;Acc:1030408... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
RPS52.106e-8264.21Protein component of the small (40S) ribosomal sub... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO472359.885e-10072.92Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
rps56.685e-10275.00ribosomal protein S5 [Source:NCBI gene;Acc:1011591... [more]
back to top
BLAST of 40S ribosomal protein S5 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000076086.11.986e-133100.00SMESG000076086.1[more]
SMESG000061113.17.258e-12493.26SMESG000061113.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30026093 ID=SMED30026093|Name=40S ribosomal protein S5|organism=Schmidtea mediterranea sexual|type=transcript|length=670bp
GTTTAAATATACTGTTTGCATTATAGAATTTTATTTTATATATATTGTAG
TTGAACTATGGATACATCTGACTTTAAGCTTTTTAATAAATGGAGCACTG
ATGATGTTCACACTACCGATCTATCATTAACCGATTATATTAATTATAGT
GGCAAGTATGCAAAAATAATTCCTCATTCTGCTGGTCGTTATCAAACCAA
ACGATTTAGAAAGGCACAATGCCCGATTGTTGAAAGATTCGCATGTTCTT
TAATGATGCATGGTAGAAATAATGGAAAAAAGATTAAGGCAAATAATATT
ATAAAACATGCATTTGAATTAATGCATTTGATGACTGGTGAAAATCCCAT
TCAAACCATGATCAATGCCATTTCAAACAGTGGTGCTCGAGAAGATTCTA
CAAGAATTGGTCGTGGTGGAGCTGTGAAAAGACAGGCTGTTGATGTATCA
CCTCTGAGGCGAGTTAACAAAGCAATTTCACTGCTTTGTACCGGATCAAG
AGAAGCTTCATTCCGAAACACTAAAACTATTGCTGAATGTCTTAGTGATG
AATTAATTAACGCATCTAAGGGAAGTTCAAATTCTTATGCCATTAAAAAG
AAAGATGAACTTGAAAGAGTTGCAAAATCTAATCGTTAATCATAGTTAAT
TAATAAATCTTGGATGAATT
back to top

protein sequence of SMED30026093-orf-1

>SMED30026093-orf-1 ID=SMED30026093-orf-1|Name=SMED30026093-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=194bp
MDTSDFKLFNKWSTDDVHTTDLSLTDYINYSGKYAKIIPHSAGRYQTKRF
RKAQCPIVERFACSLMMHGRNNGKKIKANNIIKHAFELMHLMTGENPIQT
MINAISNSGAREDSTRIGRGGAVKRQAVDVSPLRRVNKAISLLCTGSREA
SFRNTKTIAECLSDELINASKGSSNSYAIKKKDELERVAKSNR*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000026gut
PLANA:0000120progenitor cell
PLANA:0000429neoblast
PLANA:0002032epidermal cell
Vocabulary: INTERPRO
TermDefinition
IPR036823Ribosomal_S7_dom_sf
IPR005716Ribosomal_S5/S7_euk/arc
IPR023798Ribosomal_S7_dom
IPR000235Ribosomal_S5/S7
Vocabulary: biological process
TermDefinition
GO:0006412translation
GO:0000184nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0006364rRNA processing
GO:0006413translational initiation
GO:0006450regulation of translational fidelity
GO:0006614SRP-dependent cotranslational protein targeting to membrane
GO:0019083viral transcription
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0003729mRNA binding
GO:0003735structural constituent of ribosome
GO:0005515protein binding
Vocabulary: cellular component
TermDefinition
GO:0005654nucleoplasm
GO:0005829cytosol
GO:0005840ribosome
GO:0005925focal adhesion
GO:0015935small ribosomal subunit
GO:0016020membrane
GO:0022627cytosolic small ribosomal subunit
GO:0030529intracellular ribonucleoprotein complex
GO:0031012extracellular matrix
GO:0070062extracellular exosome
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036823Ribosomal protein S7 domain superfamilyGENE3DG3DSA:1.10.455.10coord: 1..193
e-value: 1.9E-93
score: 313.5
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILYSSF47973Ribosomal protein S7coord: 6..193
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 46..193
e-value: 1.2E-34
score: 119.1
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 6..193
e-value: 1.2E-80
score: 267.6
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 7..193
e-value: 2.03727E-125
score: 349.16
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 2..193
e-value: 2.2E-40
score: 136.4
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 2..193
NoneNo IPR availablePANTHERPTHR11205:SF3440S RIBOSOMAL PROTEIN S5coord: 2..193