Elongation factor 1-delta
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30026092 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 8
Homology
BLAST of Elongation factor 1-delta vs. Ensembl Human
Match: EEF1D (eukaryotic translation elongation factor 1 delta [Source:HGNC Symbol;Acc:HGNC:3211]) HSP 1 Score: 154.066 bits (388), Expect = 5.455e-49 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K ++A S+I+LDVK WDDETDMA+LE VRSI+ DGL+WG+SKLVP+ YGI+KLQI CVVEDDKVGTD LEE+IT+FE+ VQSVDIAAFNK Sbjct: 57 YAEKKAKKPALVAKSSILLDVKPWDDETDMAQLEACVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNK 155
BLAST of Elongation factor 1-delta vs. Ensembl Human
Match: EEF1B2 (eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]) HSP 1 Score: 155.606 bits (392), Expect = 9.785e-49 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Human
Match: EEF1B2 (eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]) HSP 1 Score: 155.606 bits (392), Expect = 9.785e-49 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Human
Match: EEF1B2 (eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]) HSP 1 Score: 155.606 bits (392), Expect = 9.785e-49 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Human
Match: EEF1B2 (eukaryotic translation elongation factor 1 beta 2 [Source:HGNC Symbol;Acc:HGNC:3208]) HSP 1 Score: 155.606 bits (392), Expect = 9.785e-49 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Celegans
Match: eef-1B.1 (Probable elongation factor 1-beta/1-delta 1 [Source:UniProtKB/Swiss-Prot;Acc:P34460]) HSP 1 Score: 120.939 bits (302), Expect = 9.871e-36 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 38 IATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKIT-EFEDLVQSVDIAAFNK 301 IA S++ILDVK WDDETD+ E+EK VRSIE DGL+WG +KL+P+ YGIKKLQI V+ED KV D L EKIT +FED VQSVDI AFNK Sbjct: 124 IAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNK 212
BLAST of Elongation factor 1-delta vs. Ensembl Celegans
Match: eef-1B.2 (Probable elongation factor 1-beta/1-delta 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2H9]) HSP 1 Score: 122.094 bits (305), Expect = 1.108e-35 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 38 IATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKIT-EFEDLVQSVDIAAFNK 301 IA S++ILDVK WDDETD+ E+EK VRSIE DGL+WG +KL+P+ YGIKKLQI V+ED KV D L EKIT +FED VQSVDI AFNK Sbjct: 174 IAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNK 262
BLAST of Elongation factor 1-delta vs. Ensembl Celegans
Match: eef-1B.2 (Probable elongation factor 1-beta/1-delta 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9U2H9]) HSP 1 Score: 122.094 bits (305), Expect = 1.108e-35 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 38 IATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKIT-EFEDLVQSVDIAAFNK 301 IA S++ILDVK WDDETD+ E+EK VRSIE DGL+WG +KL+P+ YGIKKLQI V+ED KV D L EKIT +FED VQSVDI AFNK Sbjct: 174 IAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKITGDFEDHVQSVDIVAFNK 262
BLAST of Elongation factor 1-delta vs. Ensembl Fly
Match: eEF1beta (gene:FBgn0028737 transcript:FBtr0332947) HSP 1 Score: 138.658 bits (348), Expect = 1.653e-42 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 2 Query: 35 IIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 +IA S+++LDVK WDDETDM E+E VR+IE DGLLWG+SKLVP+ YGI KLQI CV+EDDKV D L+EKI EFED VQSVDIAAFNK Sbjct: 133 LIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNK 221
BLAST of Elongation factor 1-delta vs. Ensembl Fly
Match: eEF1beta (gene:FBgn0028737 transcript:FBtr0345627) HSP 1 Score: 138.658 bits (348), Expect = 1.653e-42 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 2 Query: 35 IIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 +IA S+++LDVK WDDETDM E+E VR+IE DGLLWG+SKLVP+ YGI KLQI CV+EDDKV D L+EKI EFED VQSVDIAAFNK Sbjct: 133 LIAKSSVLLDVKPWDDETDMKEMENNVRTIEMDGLLWGASKLVPVGYGINKLQIMCVIEDDKVSIDLLQEKIEEFEDFVQSVDIAAFNK 221
BLAST of Elongation factor 1-delta vs. Ensembl Fly
Match: eEF1delta (gene:FBgn0032198 transcript:FBtr0079951) HSP 1 Score: 127.487 bits (319), Expect = 6.058e-38 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 35 IIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 IIA SNIILDVK WDDETD+ +E +R I DGLLWG+SK VP+A+GI+KL ISCVVEDDKV D+L E+I + ED VQSVDIAAFNK Sbjct: 140 IIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNK 228
BLAST of Elongation factor 1-delta vs. Ensembl Fly
Match: eEF1delta (gene:FBgn0032198 transcript:FBtr0079952) HSP 1 Score: 128.257 bits (321), Expect = 6.371e-38 Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 2 Query: 35 IIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 IIA SNIILDVK WDDETD+ +E +R I DGLLWG+SK VP+A+GI+KL ISCVVEDDKV D+L E+I + ED VQSVDIAAFNK Sbjct: 167 IIAKSNIILDVKPWDDETDLKVMETEIRKITQDGLLWGASKFVPVAFGIQKLSISCVVEDDKVSIDWLTEEIEKLEDFVQSVDIAAFNK 255
BLAST of Elongation factor 1-delta vs. Ensembl Zebrafish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]) HSP 1 Score: 159.073 bits (401), Expect = 4.900e-51 Identity = 73/99 (73.74%), Postives = 89/99 (89.90%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y+Q+K+K +IA S+I+LDVK WDDETDM++LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 64 YSQRKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITQFEDYVQSVDIAAFNK 162
BLAST of Elongation factor 1-delta vs. Ensembl Zebrafish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]) HSP 1 Score: 159.073 bits (401), Expect = 4.989e-50 Identity = 73/99 (73.74%), Postives = 89/99 (89.90%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y+Q+K+K +IA S+I+LDVK WDDETDM++LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 146 YSQRKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITQFEDYVQSVDIAAFNK 244
BLAST of Elongation factor 1-delta vs. Ensembl Zebrafish
Match: eef1db (eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]) HSP 1 Score: 146.362 bits (368), Expect = 8.877e-45 Identity = 66/85 (77.65%), Postives = 80/85 (94.12%), Query Frame = 2 Query: 47 SNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 S+I+LDVK WDDETDM++LE+ VRS++ DGLLWG+SKL+P+ YGIKKLQI+CVVEDDKVGTDFLEE+IT+FED VQSVD+AAFNK Sbjct: 189 SSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLMPVGYGIKKLQINCVVEDDKVGTDFLEEEITKFEDYVQSVDVAAFNK 273
BLAST of Elongation factor 1-delta vs. Ensembl Zebrafish
Match: eef1db (eukaryotic translation elongation factor 1 delta b (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-030131-6544]) HSP 1 Score: 146.747 bits (369), Expect = 1.073e-44 Identity = 66/85 (77.65%), Postives = 80/85 (94.12%), Query Frame = 2 Query: 47 SNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 S+I+LDVK WDDETDM++LE+ VRS++ DGLLWG+SKL+P+ YGIKKLQI+CVVEDDKVGTDFLEE+IT+FED VQSVD+AAFNK Sbjct: 213 SSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLMPVGYGIKKLQINCVVEDDKVGTDFLEEEITKFEDYVQSVDVAAFNK 297
BLAST of Elongation factor 1-delta vs. Ensembl Zebrafish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]) HSP 1 Score: 140.584 bits (353), Expect = 2.043e-42 Identity = 63/89 (70.79%), Postives = 79/89 (88.76%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLV 271 Y+Q+K+K +IA S+I+LDVK WDDETDM++LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED V Sbjct: 192 YSQRKAKKPALIAKSSILLDVKPWDDETDMSKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITQFEDYV 280
BLAST of Elongation factor 1-delta vs. Ensembl Xenopus
Match: ENSXETT00000033558.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939]) HSP 1 Score: 157.918 bits (398), Expect = 2.144e-49 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K +IA S+I+LDVK WDDETDMA+LE+ VR+++ DGLLWGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 154 YAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNK 252
BLAST of Elongation factor 1-delta vs. Ensembl Xenopus
Match: ENSXETT00000019492.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939]) HSP 1 Score: 159.458 bits (402), Expect = 3.969e-49 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K +IA S+I+LDVK WDDETDMA+LE+ VR+++ DGLLWGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 223 YAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNK 321
BLAST of Elongation factor 1-delta vs. Ensembl Xenopus
Match: ENSXETT00000019482.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939]) HSP 1 Score: 158.688 bits (400), Expect = 4.148e-49 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K +IA S+I+LDVK WDDETDMA+LE+ VR+++ DGLLWGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 199 YAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNK 297
BLAST of Elongation factor 1-delta vs. Ensembl Xenopus
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:448658]) HSP 1 Score: 152.91 bits (385), Expect = 1.290e-47 Identity = 72/99 (72.73%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KKSK +IA S+I+LDVK WDDETDMA+LE+ VRSI+ +GL+WG+SKLVP+ YGIKKLQI CVVEDDKVGTD LEE IT FED VQS+D+AAFNK Sbjct: 129 YEAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIQMEGLVWGASKLVPVGYGIKKLQIQCVVEDDKVGTDVLEENITAFEDFVQSMDVAAFNK 227
BLAST of Elongation factor 1-delta vs. Ensembl Xenopus
Match: ENSXETT00000033553.1 (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:NCBI gene;Acc:496939]) HSP 1 Score: 158.303 bits (399), Expect = 3.394e-46 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K +IA S+I+LDVK WDDETDMA+LE+ VR+++ DGLLWGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 618 YAEKKAKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNK 716
BLAST of Elongation factor 1-delta vs. Ensembl Mouse
Match: Eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]) HSP 1 Score: 153.68 bits (387), Expect = 1.345e-48 Identity = 71/99 (71.72%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDM +LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 85 YESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 183
BLAST of Elongation factor 1-delta vs. Ensembl Mouse
Match: Eef1d (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906]) HSP 1 Score: 152.91 bits (385), Expect = 2.491e-48 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K ++A S+I+LDVK WDDETDMA+LE VRSI+ DGL+WG+SKLVP+ YGI+KLQI CVVEDDKVGTD LEE+IT+FE+ VQSVDIAAFNK Sbjct: 91 YAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNK 189
BLAST of Elongation factor 1-delta vs. Ensembl Mouse
Match: Eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:MGI Symbol;Acc:MGI:1929520]) HSP 1 Score: 154.066 bits (388), Expect = 2.768e-48 Identity = 71/99 (71.72%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDM +LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Mouse
Match: Eef1d (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906]) HSP 1 Score: 154.451 bits (389), Expect = 5.434e-48 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K ++A S+I+LDVK WDDETDMA+LE VRSI+ DGL+WG+SKLVP+ YGI+KLQI CVVEDDKVGTD LEE+IT+FE+ VQSVDIAAFNK Sbjct: 158 YAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNK 256
BLAST of Elongation factor 1-delta vs. Ensembl Mouse
Match: Eef1d (eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein) [Source:MGI Symbol;Acc:MGI:1913906]) HSP 1 Score: 154.451 bits (389), Expect = 5.434e-48 Identity = 71/99 (71.72%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KK+K ++A S+I+LDVK WDDETDMA+LE VRSI+ DGL+WG+SKLVP+ YGI+KLQI CVVEDDKVGTD LEE+IT+FE+ VQSVDIAAFNK Sbjct: 158 YAEKKAKKPTLVAKSSILLDVKPWDDETDMAQLETCVRSIQLDGLVWGASKLVPVGYGIRKLQIQCVVEDDKVGTDLLEEEITKFEEHVQSVDIAAFNK 256
BLAST of Elongation factor 1-delta vs. UniProt/SwissProt
Match: sp|P29693|EF1D_XENLA (Elongation factor 1-delta OS=Xenopus laevis OX=8355 GN=eef1d PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 1.940e-48 Identity = 74/100 (74.00%), Postives = 87/100 (87.00%), Query Frame = 2 Query: 2 MYNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KKSK +IA S+I+LDVK WDDETDMA+LE+ VR+++ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT+FED VQSVDIAAFNK Sbjct: 165 QYAEKKSKKPGVIAKSSILLDVKPWDDETDMAKLEECVRTVQMDGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDYVQSVDIAAFNK 264
BLAST of Elongation factor 1-delta vs. UniProt/SwissProt
Match: sp|P30151|EF1B_XENLA (Elongation factor 1-beta OS=Xenopus laevis OX=8355 GN=eef1b PE=1 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 3.873e-48 Identity = 74/99 (74.75%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KKSK +IA S+I+LDVK WDDETDM +LE+ +RSI+ DGLLWGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEEKIT FED VQS+D+AAFNK Sbjct: 128 YEAKKSKKPTLIAKSSILLDVKPWDDETDMGKLEECLRSIQMDGLLWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDVLEEKITAFEDFVQSMDVAAFNK 226
BLAST of Elongation factor 1-delta vs. UniProt/SwissProt
Match: sp|P24534|EF1B_HUMAN (Elongation factor 1-beta OS=Homo sapiens OX=9606 GN=EEF1B2 PE=1 SV=3) HSP 1 Score: 155.606 bits (392), Expect = 4.699e-48 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. UniProt/SwissProt
Match: sp|Q9YGQ1|EF1B_CHICK (Elongation factor 1-beta OS=Gallus gallus OX=9031 GN=EEF1B PE=2 SV=3) HSP 1 Score: 155.221 bits (391), Expect = 6.659e-48 Identity = 72/99 (72.73%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPALVAKSSILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. UniProt/SwissProt
Match: sp|O70251|EF1B_MOUSE (Elongation factor 1-beta OS=Mus musculus OX=10090 GN=Eef1b PE=1 SV=5) HSP 1 Score: 154.066 bits (388), Expect = 1.936e-47 Identity = 71/99 (71.72%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+K ++A S+I+LDVK WDDETDM +LE+ VRSI+ DGL+WGSSKLVP+ YGIKKLQI CVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 126 YESKKAKKPAVVAKSSILLDVKPWDDETDMTKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTDMLEEQITAFEDYVQSMDVAAFNK 224
BLAST of Elongation factor 1-delta vs. TrEMBL
Match: A0A183WN38 (EF1_GNE domain-containing protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS13541 PE=3 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 6.283e-51 Identity = 81/99 (81.82%), Postives = 89/99 (89.90%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KK+ V+IA S I+LDVK WDDETDMAE+EKAVRSIE DGL+WG+SKLVPLAYGIKKLQI CVVEDDKVGTDFLEE+IT+FEDLVQSVDIAAFNK Sbjct: 98 YEAKKANKPVVIAKSTIVLDVKPWDDETDMAEVEKAVRSIEKDGLVWGASKLVPLAYGIKKLQIGCVVEDDKVGTDFLEEEITKFEDLVQSVDIAAFNK 196
BLAST of Elongation factor 1-delta vs. TrEMBL
Match: A0A1X7VPS3 (Uncharacterized protein OS=Amphimedon queenslandica OX=400682 GN=100641200 PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 2.451e-50 Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 YN KKSK ++A SNIILDVK WDDETDM E+E VR+IE DGLLWG+SK VPLAYGIKKLQISCVVEDDK+GTDFLEE IT FEDLVQSVD+AAFNK Sbjct: 120 YNAKKSKKPALVAKSNIILDVKPWDDETDMKEVEAKVRTIEADGLLWGASKFVPLAYGIKKLQISCVVEDDKIGTDFLEEAITAFEDLVQSVDVAAFNK 218
BLAST of Elongation factor 1-delta vs. TrEMBL
Match: T1ERY4 (Uncharacterized protein OS=Helobdella robusta OX=6412 GN=20199334 PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 7.333e-50 Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KKSK IIA SNI+LDVK WDDETDMA++E+ VRS++ DGLLWG+SKLVPLAYGIKKLQI+CVVEDDKVGTDFLEE+IT+FEDLVQSVDIAAFNK Sbjct: 122 YEAKKSKKEAIIAKSNIVLDVKPWDDETDMAQVEECVRSVQCDGLLWGASKLVPLAYGIKKLQITCVVEDDKVGTDFLEEEITKFEDLVQSVDIAAFNK 220
BLAST of Elongation factor 1-delta vs. TrEMBL
Match: A0A1I8JDA6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005311g1 PE=3 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.310e-49 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KKSK ++A S+I+LDVK WDDETDMAE+E+ VRSI TDGLLWG+SKLVP+ YGIKKLQI CVVEDDKVGTDFLEE+IT+FEDLVQSVD+AAF K Sbjct: 130 YQEKKSKKPALVAKSSIVLDVKPWDDETDMAEMERCVRSIATDGLLWGASKLVPVGYGIKKLQIGCVVEDDKVGTDFLEEEITKFEDLVQSVDVAAFQK 228
BLAST of Elongation factor 1-delta vs. TrEMBL
Match: A0A1I8I9C9 (Uncharacterized protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig005313g1 PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.516e-49 Identity = 76/99 (76.77%), Postives = 88/99 (88.89%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KKSK ++A S+I+LDVK WDDETDMAE+E+ VRSI TDGLLWG+SKLVP+ YGIKKLQI CVVEDDKVGTDFLEE+IT+FEDLVQSVD+AAF K Sbjct: 129 YQEKKSKKPALVAKSSIVLDVKPWDDETDMAEMERCVRSIATDGLLWGASKLVPVGYGIKKLQIGCVVEDDKVGTDFLEEEITKFEDLVQSVDVAAFQK 227
BLAST of Elongation factor 1-delta vs. Ensembl Cavefish
Match: eef1da (eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein) [Source:ZFIN;Acc:ZDB-GENE-040426-2740]) HSP 1 Score: 157.918 bits (398), Expect = 2.262e-49 Identity = 73/99 (73.74%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +KS V+IA S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 169 YAARKSAKPVLIAKSSILLDVKPWDDETDMAKLEECVRSVQADGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDMLEEEITKFEDFVQSVDVAAFNK 267
BLAST of Elongation factor 1-delta vs. Ensembl Cavefish
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:103032892]) HSP 1 Score: 155.992 bits (393), Expect = 4.106e-49 Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 YN KKSK +IA S+I+LDVK WDDETDMA+LE+ VRSIE DGL+WG SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE IT FED +QSVD+AAFNK Sbjct: 126 YNAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIELDGLVWGQSKLVPVGYGIKKLQIACVVEDDKVGTDQLEELITAFEDHIQSVDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Cavefish
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:103032892]) HSP 1 Score: 155.992 bits (393), Expect = 4.106e-49 Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 YN KKSK +IA S+I+LDVK WDDETDMA+LE+ VRSIE DGL+WG SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE IT FED +QSVD+AAFNK Sbjct: 126 YNAKKSKKPALIAKSSILLDVKPWDDETDMAKLEECVRSIELDGLVWGQSKLVPVGYGIKKLQIACVVEDDKVGTDQLEELITAFEDHIQSVDVAAFNK 224
BLAST of Elongation factor 1-delta vs. Ensembl Cavefish
Match: eef1db (eukaryotic translation elongation factor 1 delta [Source:NCBI gene;Acc:103025006]) HSP 1 Score: 157.147 bits (396), Expect = 8.046e-49 Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +K+K +IA S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 197 YAARKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQVDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDLLEEEITKFEDYVQSVDVAAFNK 295
BLAST of Elongation factor 1-delta vs. Ensembl Cavefish
Match: eef1db (eukaryotic translation elongation factor 1 delta [Source:NCBI gene;Acc:103025006]) HSP 1 Score: 154.836 bits (390), Expect = 1.383e-45 Identity = 72/99 (72.73%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y +K+K +IA S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 488 YAARKAKKPALIAKSSILLDVKPWDDETDMAKLEECVRSVQVDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDLLEEEITKFEDYVQSVDVAAFNK 586
BLAST of Elongation factor 1-delta vs. Ensembl Sea Lamprey
Match: ENSPMAT00000008426.1 (pep scaffold:Pmarinus_7.0:GL501239:13751:22054:1 gene:ENSPMAG00000007622.1 transcript:ENSPMAT00000008426.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 157.532 bits (397), Expect = 4.035e-50 Identity = 74/99 (74.75%), Postives = 87/99 (87.88%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y++KK+K V+IA S+I+LDVK WDDETDMAELE VRS+ DGLLWG+SKL+P+ YGIKKLQI CVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 152 YSEKKAKKPVLIAKSSIVLDVKPWDDETDMAELEAKVRSVSMDGLLWGASKLLPVGYGIKKLQIQCVVEDDKVGTDILEEEITKFEDHVQSVDVAAFNK 250
BLAST of Elongation factor 1-delta vs. Ensembl Yeast
Match: EFB1 (Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site; human homolog EEF1B2 can complement yeast efb1 mutants [Source:SGD;Acc:S000000003]) HSP 1 Score: 100.523 bits (249), Expect = 1.270e-28 Identity = 48/85 (56.47%), Postives = 63/85 (74.12%), Query Frame = 2 Query: 47 SNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 S + LDVK WDDET++ E+ V++IE +GL WG+ + +P+ +GIKKLQI+CVVEDDKV D L++ I E ED VQS DIAA K Sbjct: 121 SIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWGAHQFIPIGFGIKKLQINCVVEDDKVSLDDLQQSIEEDEDHVQSTDIAAMQK 205
BLAST of Elongation factor 1-delta vs. Ensembl Nematostella
Match: EDO25946 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DVB0]) HSP 1 Score: 149.058 bits (375), Expect = 1.164e-48 Identity = 72/89 (80.90%), Postives = 81/89 (91.01%), Query Frame = 2 Query: 35 IIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 +IA SNI+LDVK WDDETDMAE+EK VRSI+ DGLLWG+SKLVPLAYGIKKLQI+ VVEDDK+ TDFLEE+I +FED VQSVDIAAFNK Sbjct: 1 MIAKSNIMLDVKPWDDETDMAEMEKLVRSIQADGLLWGASKLVPLAYGIKKLQITVVVEDDKISTDFLEEEICKFEDFVQSVDIAAFNK 89
BLAST of Elongation factor 1-delta vs. Ensembl Nematostella
Match: EDO31204 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYL3]) HSP 1 Score: 137.502 bits (345), Expect = 6.391e-42 Identity = 65/99 (65.66%), Postives = 79/99 (79.80%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 YN KK+ +IA SNII DVK WDDETD+ ELE +VRS+ DGLLWG+SKLV +AYG+KKLQI+CV+ED KV TD L +K+ EFED +QSVDI +FNK Sbjct: 165 YNAKKATKKPVIAKSNIIFDVKPWDDETDLKELENSVRSVAMDGLLWGASKLVEIAYGLKKLQITCVIEDAKVSTDDLIDKLCEFEDFIQSVDIVSFNK 263
BLAST of Elongation factor 1-delta vs. Ensembl Medaka
Match: eef1db (elongation factor 1-delta [Source:NCBI gene;Acc:101158844]) HSP 1 Score: 152.14 bits (383), Expect = 6.787e-47 Identity = 70/90 (77.78%), Postives = 82/90 (91.11%), Query Frame = 2 Query: 32 VIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 +IA S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQISCVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 202 ALIAKSSILLDVKPWDDETDMAKLEECVRSVQADGLLWGASKLVPVGYGIKKLQISCVVEDDKVGTDLLEEEITKFEDFVQSVDVAAFNK 291
BLAST of Elongation factor 1-delta vs. Ensembl Medaka
Match: eef1da (elongation factor 1-delta [Source:NCBI gene;Acc:101162958]) HSP 1 Score: 146.362 bits (368), Expect = 6.532e-45 Identity = 67/85 (78.82%), Postives = 79/85 (92.94%), Query Frame = 2 Query: 47 SNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 180 SSILLDVKPWDDETDMAKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITKFEDFVQSVDVAAFNK 264
BLAST of Elongation factor 1-delta vs. Ensembl Medaka
Match: eef1b2 (eukaryotic translation elongation factor 1 beta 2 [Source:NCBI gene;Acc:100049360]) HSP 1 Score: 142.51 bits (358), Expect = 1.940e-44 Identity = 67/85 (78.82%), Postives = 77/85 (90.59%), Query Frame = 2 Query: 47 SNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 S+I+LDVK WDDETDMA+LE+ VRSI+ DGL+WG SKLVP+ YGIKKLQISCVVEDDKVGTD LEE+IT FED VQS+D+AAFNK Sbjct: 100 SSILLDVKPWDDETDMAKLEECVRSIQMDGLVWGQSKLVPVGYGIKKLQISCVVEDDKVGTDILEEQITAFEDYVQSMDVAAFNK 184
BLAST of Elongation factor 1-delta vs. Ensembl Medaka
Match: eef1db (elongation factor 1-delta [Source:NCBI gene;Acc:101158844]) HSP 1 Score: 150.599 bits (379), Expect = 1.266e-43 Identity = 70/89 (78.65%), Postives = 82/89 (92.13%), Query Frame = 2 Query: 35 IIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 +IA S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQISCVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 623 LIAKSSILLDVKPWDDETDMAKLEECVRSVQADGLLWGASKLVPVGYGIKKLQISCVVEDDKVGTDLLEEEITKFEDFVQSVDVAAFNK 711
BLAST of Elongation factor 1-delta vs. Ensembl Medaka
Match: eef1da (elongation factor 1-delta [Source:NCBI gene;Acc:101162958]) HSP 1 Score: 145.591 bits (366), Expect = 3.200e-43 Identity = 67/85 (78.82%), Postives = 79/85 (92.94%), Query Frame = 2 Query: 47 SNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 S+I+LDVK WDDETDMA+LE+ VRS++ DGLLWG+SKLVP+ YGIKKLQI+CVVEDDKVGTD LEE+IT+FED VQSVD+AAFNK Sbjct: 331 SSILLDVKPWDDETDMAKLEECVRSVQMDGLLWGASKLVPVGYGIKKLQINCVVEDDKVGTDILEEEITKFEDFVQSVDVAAFNK 415
BLAST of Elongation factor 1-delta vs. Planmine SMEST
Match: SMESG000081496.1 (SMESG000081496.1) HSP 1 Score: 194.512 bits (493), Expect = 5.146e-64 Identity = 96/100 (96.00%), Postives = 96/100 (96.00%), Query Frame = 2 Query: 2 MYNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 MYNQKKS AVIIA SNIILDVK WDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK Sbjct: 158 MYNQKKSTKAVIIAKSNIILDVKPWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 257
BLAST of Elongation factor 1-delta vs. Planmine SMEST
Match: SMESG000026862.1 (SMESG000026862.1) HSP 1 Score: 157.532 bits (397), Expect = 3.635e-50 Identity = 77/99 (77.78%), Postives = 84/99 (84.85%), Query Frame = 2 Query: 5 YNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSSKLVPLAYGIKKLQISCVVEDDKVGTDFLEEKITEFEDLVQSVDIAAFNK 301 Y KKS IIA S+I LDVK WDDETDMAELEK VRSI DGLLWG+SKLVP+ YGIKKLQI CVVEDDKVGTDFLEE+IT+FED VQS+D+AAFNK Sbjct: 108 YAAKKSTKTAIIAKSSITLDVKPWDDETDMAELEKCVRSISADGLLWGASKLVPVGYGIKKLQIICVVEDDKVGTDFLEEEITKFEDFVQSMDVAAFNK 206 The following BLAST results are available for this feature:
BLAST of Elongation factor 1-delta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Elongation factor 1-delta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 3
BLAST of Elongation factor 1-delta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 4
BLAST of Elongation factor 1-delta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Elongation factor 1-delta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Elongation factor 1-delta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Elongation factor 1-delta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Elongation factor 1-delta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Elongation factor 1-delta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Elongation factor 1-delta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Elongation factor 1-delta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Elongation factor 1-delta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 2
BLAST of Elongation factor 1-delta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Elongation factor 1-delta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30026092 ID=SMED30026092|Name=Elongation factor 1-delta|organism=Schmidtea mediterranea sexual|type=transcript|length=302bpback to top protein sequence of SMED30026092-orf-1 >SMED30026092-orf-1 ID=SMED30026092-orf-1|Name=SMED30026092-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=100bp MYNQKKSKNAVIIATSNIILDVKQWDDETDMAELEKAVRSIETDGLLWGSback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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