GTP cyclohydrolase
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30025911 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of GTP cyclohydrolase vs. Ensembl Celegans
Match: T24A6.7 (pep chromosome:WBcel235:V:3525274:3526178:1 gene:WBGene00020747.1 transcript:T24A6.7.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:T24A6.7) HSP 1 Score: 121.709 bits (304), Expect = 1.302e-34 Identity = 66/167 (39.52%), Postives = 96/167 (57.49%), Query Frame = 1 Query: 79 KYIMFYK-NSVFSQFYACNFTVN--------NQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENV--WIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSEN 546 +++ FYK + VFS FY C F+ N FNC QY MY KALL D + A KILKE P +K+LGRQ+ + + W +N ++++ G KF+QN +L T G +LVE +P D IWGIG S D +E+ WRG N +G ++ VR+E+ +++ Sbjct: 14 QFVFFYKFDCVFSNFYPCEFSAQEFENDVEKNVNFNCSEQYFMYHKALLVGDSEIAGKILKETDPRKMKRLGRQLSMSKKQLEEWSQNSKEVMYNGCLEKFSQNNVCRENLFRTHGMRLVEASPMDRIWGIGLSHHDKRCENEQTWRGTNWMGSVLDKVREELWTKS 180
BLAST of GTP cyclohydrolase vs. Ensembl Celegans
Match: irg-1 (Infection Response protein [Source:UniProtKB/TrEMBL;Acc:O16327]) HSP 1 Score: 110.538 bits (275), Expect = 3.103e-30 Identity = 65/168 (38.69%), Postives = 91/168 (54.17%), Query Frame = 1 Query: 82 YIMFYKNS-VFSQFYACNF---TVNN-----------QKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENV--WIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEI 534 +++FY+ + VFS FY F V N KF C QY MY KALL D A +ILKE P+ +K LGR++ E + W + + ++ KF+QN+D + L T G KLVE +P D IWGIG + D DE+ WRG N LG+++ VR+E+ Sbjct: 15 FVLFYEAACVFSNFYPSGFEAKPVENFLKDTEKKEKLLKFTCSEQYFMYNKALLVGDMDIAEQILKETNPMKMKLLGRKLSMTKEQLKLWSQKSKDVMYRACLEKFSQNEDCRMILFRTHGMKLVEASPTDKIWGIGLDKADQRCEDERNWRGSNWLGEVLDQVREEL 182
BLAST of GTP cyclohydrolase vs. Ensembl Celegans
Match: C08E8.4 (pep chromosome:WBcel235:V:18371846:18373528:1 gene:WBGene00007440.1 transcript:C08E8.4.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C08E8.4) HSP 1 Score: 99.7525 bits (247), Expect = 4.415e-26 Identity = 62/179 (34.64%), Postives = 89/179 (49.72%), Query Frame = 1 Query: 64 AFTNEKYIMFYKN-SVFSQFYACNFTVNNQK---------------FNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQV----HDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILS 540 A + Y++FY++ SVFS F+ NF K FNC QY MY KALL D +A I+ + P+++K GRQ+ HD + W + I+ AKF+QN +L L T+ LVE + ND IWG G + D + D W G N LG+I+ +R E++ Sbjct: 8 AKNQQTYVLFYEDESVFSNFHPSNFEAETAKKLVNSGMFKEEEMLKFNCSEQYFMYHKALLVGDVDSAKVIITAKHPMVMKMTGRQLNMNRHDIDN--WTQKSRDIMYLACLAKFSQNVELRKMLFRTQDMYLVEASGNDAIWGNGIWKEDKRSDDVANWHGTNYLGEILDRIRGELIG 184
BLAST of GTP cyclohydrolase vs. Ensembl Celegans
Match: C37C3.1 (pep chromosome:WBcel235:V:7857963:7859909:1 gene:WBGene00016495.1 transcript:C37C3.1a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:C37C3.1) HSP 1 Score: 87.8113 bits (216), Expect = 2.643e-20 Identity = 56/169 (33.14%), Postives = 88/169 (52.07%), Query Frame = 1 Query: 70 TNEKYIMFYKN-SVFSQFYACNFTVNN-------QKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQ--VHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKW----RGLNLLGKIISDVRDEI 534 ++ +Y +F++ S FS + +F + + F C QY MY KA L D K IL+ P +K + + + + ++VW EN+E++++ G AKF ++ L L T GSKLVE +P D IWGIG + +W G NLLGKI+ +R+E+ Sbjct: 18 SDGEYTLFFRKVSPFSNHHPADFICDEAINCKEPKTFCCSEQYYMYNKASLLMDSKLMAAILEATCPKTMKTMCSKWSLKGWKDSVWDENKEEVMRIGCLAKFRASRHLRYALFLTTGSKLVECSPFDKIWGIG------KDMQAAQWAPLSSGKNLLGKILDGIREEL 180
BLAST of GTP cyclohydrolase vs. UniProt/SwissProt
Match: sp|Q5UR67|RIBX_MIMIV (N-glycosidase R617 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_R617 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.374e-31 Identity = 69/164 (42.07%), Postives = 96/164 (58.54%), Query Frame = 1 Query: 76 EKYIMFY---KNS----VFSQFYACNFT--VNNQKFN---CCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDE 531 +KY+ F+ KN +FSQ++ NF +N ++F QYMM KALLF D KI++ K IK LGR+V +FN +W +++ IV EGNR KF+QN DL+ LL T +VE +P+D IWGIG + E KW G NLLGK++ +R+E Sbjct: 4 DKYVFFHGANKNQAGVHIFSQWFPVNFKEYLNGEEFAEYVSAEQYMMAHKALLFGDMFHFKKIMECSKQCKIKYLGRRVRNFNPTIWDKHKFDIVTEGNRLKFSQNPDLMKRLLETGNKTIVEASPSDKIWGIGLTAQQAVNIPENKWPGKNLLGKVLMKIREE 167
BLAST of GTP cyclohydrolase vs. UniProt/SwissProt
Match: sp|P30176|RIBX_ECOLI (N-glycosidase YbiA OS=Escherichia coli (strain K12) OX=83333 GN=ybiA PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 2.421e-10 Identity = 44/157 (28.03%), Postives = 73/157 (46.50%), Query Frame = 1 Query: 85 IMFYKNSV----FSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSE 543 I FY S FS F A V+ + + Y +K F D+K +I + P++ ++GR W +E+++++ RAKF Q+ +L LL+T +KLVE ND WG D +G N LG ++ ++R+++ E Sbjct: 17 INFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQK---FLDEKYREEIRRVSSPMVAARMGRDRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYWG-----------DGGHGKGKNRLGYLLMELREQLAIE 159
BLAST of GTP cyclohydrolase vs. UniProt/SwissProt
Match: sp|Q7MGG3|RIBXA_VIBVY (Riboflavin biosynthesis protein VVA0006 OS=Vibrio vulnificus (strain YJ016) OX=196600 GN=VVA0006 PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 3.970e-9 Identity = 50/177 (28.25%), Postives = 79/177 (44.63%), Query Frame = 1 Query: 40 YILNSAIMAFTNEKYIMFYK----NSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN 558 Y + S IM E+ I FY+ + + FY C+ TV+ C Y +A F D + K+L+ +L R+ + + W + R ++++ R KF QN L LL+T ++L E + D WG D G N LG+I+ VR+E L E++ N Sbjct: 10 YDVRSNIM----EQPIYFYEPDENHGFLANFYPCSITVSG---TCWPSSEHYYQAQKFDDVRLQEKVLRAEDAAQAFRLSREYQQWQRHDWYDIRVEVMRFIVREKFLQNTPLAHQLLATGDTELKEHSHKDAFWG-----------DGGDGHGRNELGRILMMVREE-LQEHAPYN 167
BLAST of GTP cyclohydrolase vs. UniProt/SwissProt
Match: sp|Q3Z3Y7|RIBX_SHISS (N-glycosidase YbiA OS=Shigella sonnei (strain Ss046) OX=300269 GN=ybiA PE=3 SV=1) HSP 1 Score: 53.5286 bits (127), Expect = 5.041e-8 Identity = 36/120 (30.00%), Postives = 58/120 (48.33%), Query Frame = 1 Query: 85 IMFYKNSV----FSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIW 432 I FY S FS F A V+ + + Y +K F D+K +I + P++ ++GR W +E+++++ RAKF Q+ +L + LL+T +KLVE ND W Sbjct: 17 INFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQK---FLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALRAKFEQHAELRVLLLATAPAKLVEHTENDAYW 133
BLAST of GTP cyclohydrolase vs. UniProt/SwissProt
Match: sp|Q323Z6|RIBX_SHIBS (N-glycosidase YbiA OS=Shigella boydii serotype 4 (strain Sb227) OX=300268 GN=ybiA PE=3 SV=1) HSP 1 Score: 53.1434 bits (126), Expect = 8.793e-8 Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 1 Query: 85 IMFYKNSV----FSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIW 432 I FY S FS F A V+ + + Y +K F D+K +I + P++ ++GR W +E+++++ RAKF Q+ +L LL+T +KLVE ND W Sbjct: 17 INFYSTSDDYGDFSNFAAWPIKVDGKTWPTSEHYFQAQK---FLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALRAKFEQHAELRALLLATAPAKLVEHTENDAYW 133
BLAST of GTP cyclohydrolase vs. TrEMBL
Match: A0A267FK67 (DUF1768 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008561g1 PE=4 SV=1) HSP 1 Score: 176.407 bits (446), Expect = 5.491e-53 Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 70 TNEKYIMFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEI 534 T F K S FSQFY C F V+ F+C QYMMY+KA LF+D TA IL KP +K LGRQV FN++VW E+R +IV GN AKF QN +LL LL T+G+ LVE PND IWGIG +E++P+A D+ KWRGLNLLG+I++ VR+++ Sbjct: 3 TGRFTFFFTKESPFSQFYPCQFKVDGCTFSCAEQYMMYRKAKLFNDHATAEAILAATKPAKMKALGRQVDGFNDDVWKEHRWEIVHSGNMAKFGQNPELLRTLLDTEGTTLVEAAPNDCIWGIGLAESNPDARDQSKWRGLNLLGQILTRVREDL 157
BLAST of GTP cyclohydrolase vs. TrEMBL
Match: A0A267FW75 (DUF1768 domain-containing protein OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig008992g1 PE=4 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 6.057e-53 Identity = 84/155 (54.19%), Postives = 107/155 (69.03%), Query Frame = 1 Query: 70 TNEKYIMFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEI 534 T F K S FSQFY C F V+ F+C QYMMY+KA LF+D TA IL KP +K LGRQV FN++VW E+R +IV GN AKF QN +LL LL T+G+ LVE PND IWGIG +E++P+A D+ KWRGLNLLG+I++ VR+++ Sbjct: 3 TGRFTFFFTKESPFSQFYPCQFKVDGCTFSCAEQYMMYRKAKLFNDHATAEAILAATKPAKMKALGRQVDGFNDDVWKEHRWEIVHSGNMAKFGQNPELLRTLLDTEGTTLVEAAPNDCIWGIGLAESNPDARDQAKWRGLNLLGQILTRVREDL 157
BLAST of GTP cyclohydrolase vs. TrEMBL
Match: A0A0E3WHQ6 (DUF1768 domain-containing protein OS=Paenibacillus riograndensis SBR5 OX=1073571 GN=PRIO_3300 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.679e-50 Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 76 EKYIMFYKN-SVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSE 543 EK+ FY++ S FSQ+Y C FTV+ FNC QYMMY KALLF D++TA++IL+ R P K+LGR+V FN+ W + IV +GNR KF QN++LL LL TKG+ LVE +P D IWG+G +E DP WRG N LG++++ +RD++L E Sbjct: 2 EKFTYFYRSGSPFSQWYPCYFTVDEHTFNCAEQYMMYAKALLFRDEETAMQILRARTPRTQKELGRKVSGFNDTEWKNHCRDIVYQGNREKFLQNEELLQQLLDTKGTTLVEASPTDRIWGVGLTEDDPRIRSRSSWRGSNWLGEVLTKLRDDLLQE 158
BLAST of GTP cyclohydrolase vs. TrEMBL
Match: A0A132TI25 (GTP cyclohydrolase OS=Paenibacillus riograndensis OX=483937 GN=AMQ84_28310 PE=4 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 3.679e-50 Identity = 79/157 (50.32%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 76 EKYIMFYKN-SVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSE 543 EK+ FY++ S FSQ+Y C FTV+ FNC QYMMY KALLF D++TA++IL+ R P K+LGR+V FN+ W + IV +GNR KF QN++LL LL TKG+ LVE +P D IWG+G +E DP WRG N LG++++ +RD++L E Sbjct: 2 EKFTYFYRSGSPFSQWYPCYFTVDEHTFNCAEQYMMYAKALLFRDEETAMQILRARTPRTQKELGRKVSGFNDTEWKNHCRDIVYQGNREKFLQNEELLQQLLDTKGTTLVEASPTDRIWGVGLTEDDPRIRSRSSWRGSNWLGEVLTKLRDDLLQE 158
BLAST of GTP cyclohydrolase vs. TrEMBL
Match: A0A1I8JB49 (Sec3-PIP2_bind domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 1.314e-49 Identity = 83/148 (56.08%), Postives = 106/148 (71.62%), Query Frame = 1 Query: 91 FYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEI 534 F K S FSQFY C F V+ F+C QYMMY+KA LF+D TA IL KP +K LGRQV FN++VW E+R +IV GN AKF QN +LL LL T+G+ LVE PND IWGIG +E++P+A D+ KWRGLNLLG+I++ VR+++ Sbjct: 10 FTKESPFSQFYPCQFKVDGCTFSCAEQYMMYRKAKLFNDHATAEAILAATKPAKMKALGRQVDGFNDDVWKEHRWEIVHSGNMAKFGQNPELLRTLLDTEGTTLVEAAPNDCIWGIGLAESNPDARDQSKWRGLNLLGQILTRVREDL 157
BLAST of GTP cyclohydrolase vs. Planmine SMEST
Match: SMESG000049600.1 (SMESG000049600.1) HSP 1 Score: 325.094 bits (832), Expect = 2.467e-115 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 Query: 88 MFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN 558 MFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN Sbjct: 1 MFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN 157
BLAST of GTP cyclohydrolase vs. Planmine SMEST
Match: SMESG000049600.1 (SMESG000049600.1) HSP 1 Score: 261.151 bits (666), Expect = 1.376e-90 Identity = 128/128 (100.00%), Postives = 128/128 (100.00%), Query Frame = 1 Query: 175 MMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN 558 MMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN Sbjct: 1 MMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENSTAN 128
BLAST of GTP cyclohydrolase vs. Planmine SMEST
Match: SMESG000049592.1 (SMESG000049592.1) HSP 1 Score: 261.922 bits (668), Expect = 2.996e-90 Identity = 124/158 (78.48%), Postives = 137/158 (86.71%), Query Frame = 1 Query: 76 EKYIMFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDKTAVKILKERKPVIIKQLGRQVHDFNENVWIENREKIVKEGNRAKFTQNKDLLLDLLSTKGSKLVETNPNDLIWGIGYSETDPEAFDEKKWRGLNLLGKIISDVRDEILSENS 549 +KY MF+ SVFSQFY C FTVN+QKF C QYMMY KALLFHD+ A KIL+ER P IIK+LGRQVH F+E +W ENRE+IVKEGN+AKFTQNKDL +LLSTKG+KLVETNPNDLIWGIGYSETDPEA DE KWRGLNLLGKII+DVRDEILSENS Sbjct: 5 DKYTMFFSRSVFSQFYTCTFTVNDQKFISCEQYMMYSKALLFHDENIARKILQERNPKIIKKLGRQVHKFDEKIWKENRERIVKEGNKAKFTQNKDLQKELLSTKGTKLVETNPNDLIWGIGYSETDPEALDETKWRGLNLLGKIITDVRDEILSENS 162 The following BLAST results are available for this feature:
BLAST of GTP cyclohydrolase vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 4
BLAST of GTP cyclohydrolase vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of GTP cyclohydrolase vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of GTP cyclohydrolase vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of GTP cyclohydrolase vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of GTP cyclohydrolase vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 3
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30025911 ID=SMED30025911|Name=GTP cyclohydrolase|organism=Schmidtea mediterranea sexual|type=transcript|length=586bpback to top protein sequence of SMED30025911-orf-1 >SMED30025911-orf-1 ID=SMED30025911-orf-1|Name=SMED30025911-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=167bp MAFTNEKYIMFYKNSVFSQFYACNFTVNNQKFNCCLQYMMYKKALLFHDDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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