B box-type domain-containing protein

Overview


Name	B box-type domain-containing protein
Smed ID	SMED30025791
Length (bp)	2428

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of B box-type domain-containing protein (SMED30025791) t-SNE clustered cells

Violin plots show distribution of expression levels for B box-type domain-containing protein (SMED30025791) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of B box-type domain-containing protein (SMED30025791) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for B box-type domain-containing protein (SMED30025791) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30025791

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
head region	SMED30025791	SMESG000078465.1	SmedASXL_013226	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
pharynx	SMED30025791	SMESG000078465.1	dd_Smed_v4_11048_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30025791	SMESG000078465.1	dd_Smed_v4_11048_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30025791	SMESG000078465.1	dd_Smed_v4_11048_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30025791	SMESG000078465.1	dd_Smed_v4_11048_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
head region	SMED30025791	SMESG000078465.1	dd_Smed_v6_11048_0_1	dd_Smed_v6	PMID:28171748 Stückemann et al., 2017
reproductive organ	SMED30025791	SMESG000078465.1	Contig53925	newmark_ests	PMID:28434803 Rouhana et al., 2017
reproductive organ	SMED30025791	SMESG000078465.1	Contig53925	uc_Smed_v2	PMID:28434803 Rouhana et al., 2017
epidermis	SMED30025791	SMESG000078465.1	dd_Smed_v4_11048_0_1	dd_Smed_v4	PMID:28292427 Wurtzel et al., 2017

Note: Hover over icons to view figure legend

Homology

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BLAST of B box-type domain-containing protein vs. Ensembl Human
Match: ZBBX (zinc finger B-box domain containing [Source:HGNC Symbol;Acc:HGNC:26245])

HSP 1 Score: 107.842 bits (268), Expect = 2.452e-23
Identity = 96/319 (30.09%), Postives = 142/319 (44.51%), Query Frame = 2

Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTIS------AIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPIST----LNNRVSIPSPLFKA--PDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPS---LTYAEQLLLRKHR 1036
            +L  EN++ME +LQ+ +    KEKEDR S+  +  W +G  G L+N    +S         S  K++LK+LK++    V  T + K          E   PK      +NG       + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T +      L N + +     K   PD         +    +  ++ K K  +L+ S+++      K         SLL EG ++EE S Q FQE ++ WR G     K  NL     ++ S E         +  + +        L+Y E+L L+KHR
Sbjct:    5 QLEFENQEMEKKLQEFRSTRNKEKEDRESS--EYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKM-----ANSSECEKPK------ING-------KVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPD---EPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHA--AVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHR 298

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Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTIS------AIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPIST----LNNRVSIPSPLFKA--PDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPS---LTYAEQLLLRKHR 1036
            +L  EN++ME +LQ+ +    KEKEDR S+  +  W +G  G L+N    +S         S  K++LK+LK++    V  T + K          E   PK      +NG       + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T +      L N + +     K   PD         +    +  ++ K K  +L+ S+++      K         SLL EG ++EE S Q FQE ++ WR G     K  NL     ++ S E         +  + +        L+Y E+L L+KHR
Sbjct:    5 QLEFENQEMEKKLQEFRSTRNKEKEDRESS--EYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKM-----ANSSECEKPK------ING-------KVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPD---EPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHA--AVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHR 298

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Human
Match: ZBBX (zinc finger B-box domain containing [Source:HGNC Symbol;Acc:HGNC:26245])

HSP 1 Score: 107.457 bits (267), Expect = 2.761e-23
Identity = 96/319 (30.09%), Postives = 142/319 (44.51%), Query Frame = 2

Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTIS------AIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPIST----LNNRVSIPSPLFKA--PDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPS---LTYAEQLLLRKHR 1036
            +L  EN++ME +LQ+ +    KEKEDR S+  +  W +G  G L+N    +S         S  K++LK+LK++    V  T + K          E   PK      +NG       + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T +      L N + +     K   PD         +    +  ++ K K  +L+ S+++      K         SLL EG ++EE S Q FQE ++ WR G     K  NL     ++ S E         +  + +        L+Y E+L L+KHR
Sbjct:   34 QLEFENQEMEKKLQEFRSTRNKEKEDRESS--EYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKM-----ANSSECEKPK------ING-------KVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPD---EPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHA--AVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHR 327

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Human
Match: ZBBX (zinc finger B-box domain containing [Source:HGNC Symbol;Acc:HGNC:26245])

HSP 1 Score: 107.457 bits (267), Expect = 3.388e-23
Identity = 96/319 (30.09%), Postives = 142/319 (44.51%), Query Frame = 2

Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTIS------AIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPIST----LNNRVSIPSPLFKA--PDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQF---TPSLTYAEQLLLRKHR 1036
            +L  EN++ME +LQ+ +    KEKEDR S+  +  W +G  G L+N    +S         S  K++LK+LK++    V  T + K          E   PK      +NG       + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T +      L N + +     K   PD         +    +  ++ K K  +L+ S+++      K         SLL EG ++EE S Q FQE ++ WR G     K  NL     ++ S E         +  + +        L+Y E+L L+KHR
Sbjct:   34 QLEFENQEMEKKLQEFRSTRNKEKEDRESS--EYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKM-----ANSSECEKPK------ING-------KVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPD---EPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHA--AVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHR 327

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Human
Match: ZBBX (zinc finger B-box domain containing [Source:HGNC Symbol;Acc:HGNC:26245])

HSP 1 Score: 107.457 bits (267), Expect = 3.388e-23
Identity = 96/319 (30.09%), Postives = 142/319 (44.51%), Query Frame = 2

Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTIS------AIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPIST----LNNRVSIPSPLFKA--PDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQF---TPSLTYAEQLLLRKHR 1036
            +L  EN++ME +LQ+ +    KEKEDR S+  +  W +G  G L+N    +S         S  K++LK+LK++    V  T + K          E   PK      +NG       + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T +      L N + +     K   PD         +    +  ++ K K  +L+ S+++      K         SLL EG ++EE S Q FQE ++ WR G     K  NL     ++ S E         +  + +        L+Y E+L L+KHR
Sbjct:   34 QLEFENQEMEKKLQEFRSTRNKEKEDRESS--EYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKM-----ANSSECEKPK------ING-------KVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPD---EPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHA--AVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHR 327

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BLAST of B box-type domain-containing protein vs. Ensembl Zebrafish
Match: zbbx (zinc finger, B-box domain containing [Source:ZFIN;Acc:ZDB-GENE-061207-76])

HSP 1 Score: 103.99 bits (258), Expect = 1.805e-23
Identity = 98/347 (28.24%), Postives = 161/347 (46.40%), Query Frame = 2

Query:   77 MNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGK-------KIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPI-STLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEP-AENSKENLSPMV-----------------NGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTP-SLTYAEQLLLRKHR 1036
            M L    L++ +  + +L    K+ME RL++L+  M +EKE+R   G  S W +G PG L    P+   +   K       K+++++LK E +P+  +               E +    G+N +L   GK      CGQCE   A + C EC EDYC  CF  FH KGAL++HR  P+ + L   VS    L +     +   +  ++ +S ++ ++ +       + + +P AEN      P V                 +GSLL  G ++EE S + FQEA+  WR            Q+ +++    ET +  + + L+   ++F   +L+Y E+LLL+KHR
Sbjct:   16 MKLNVRNLRELRMETVQLDQHAKEMESRLEELRQRMNQEKEEREKMG-ASRWHSGQPGVL---APSFQNVRMNKENRLSPGKMKIRVLKDEPVPAAQKQVM-----------AEPVAKAHGVNRKLKLKGK-----VCGQCEVQLAGLMCVECGEDYCAGCFVRFHQKGALKRHRLVPVQAELQTPVSTRDVLGRLQQQVHGVENQLAQGASPKSTDETDDAEERSATGSLQPMAENQIYRTQPEVLFMNDGVDVEEDEEEEEDGSLL-RGSFDEEESARSFQEALKEWRE---------RGQRPVSV---METQTEKRSQQLIH--VEFNEDALSYMEKLLLKKHR 327

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Query:   77 MNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGK-------KIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPI-STLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEP-AENSKENLSPMV-----------------NGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTP-SLTYAEQLLLRKHR 1036
            M L    L++ +  + +L    K+ME RL++L+  M +EKE+R   G  S W +G PG L    P+   +   K       K+++++LK E +P+  +               E +    G+N +L   GK      CGQCE   A + C EC EDYC  CF  FH KGAL++HR  P+ + L   VS    L +     +   +  ++ +S ++ ++ +       + + +P AEN      P V                 +GSLL  G ++EE S + FQEA+  WR            Q+ +++    ET +  + + L+   ++F   +L+Y E+LLL+KHR
Sbjct:   16 MKLNVRNLRELRMETVQLDQHAKEMESRLEELRQRMNQEKEEREKMG-ASRWHSGQPGVL---APSFQNVRMNKENRLSPGKMKIRVLKDEPVPAAQKQVM-----------AEPVAKAHGVNRKLKLKGK-----VCGQCEVQLAGLMCVECGEDYCAGCFVRFHQKGALKRHRLVPVQAELQTPVSTRDVLGRLQQQVHGVENQLAQGASPKSTDETDDAEERSATGSLQPMAENQIYRTQPEVLFMNDGVDVEEDEEEEEDGSLL-RGSFDEEESARSFQEALKEWRE---------RGQRPVSV---METQTEKRSQQLIH--VEFNEDALSYMEKLLLKKHR 327

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BLAST of B box-type domain-containing protein vs. Ensembl Xenopus
Match: fanci (FA complementation group I [Source:Xenbase;Acc:XB-GENE-981363])

HSP 1 Score: 114.39 bits (285), Expect = 1.980e-25
Identity = 95/329 (28.88%), Postives = 157/329 (47.72%), Query Frame = 2

Query:   77 MNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETL-PSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGK-NMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNR-VSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADL-----IQFTP-SLTYAEQLLLRKHR 1036
            + LKA  +++ +  + +L ++N+ ME +L+QL  +M KEKE+R+ +    +W +G  G     K  +  + SG+ I+LK+LK     P + +  S   NV+                    G  +  +  ++CGQCE   A + C EC EDYCP C+A  H KGAL+ HR+ PI     R VS  S    + + K+   S     +      +K +V        KE   +   N     N   L +G +NEE S + F + +  WR G        N +K  +++ +T+   N++ + ++  L     ++F   SLTY E+L+L+KHR
Sbjct:   17 VKLKAKNIQELRVENMQLEMQNQDMEEKLKQLLESMSKEKEERVQSKG-YHWKSGQAGNQSQDKENMVKVSSGR-IKLKILKDSMPEPEMQKVDSKMDNVI--------------------GPDRPKVKGKACGQCEAKSALLMCLECGEDYCPACYAKIHQKGALKLHRTRPIQKKTQREVSQQSRERNSNEPKDKPTSGNKVSTGFTAFNEKQEV--------KEQVPSVAVNRDASGNRESLLQGTFNEEESAKSFNDVLMEWRRGQQ------NPKKHCSLQAATDCTGNSESQTVMTVLTKPFKVEFAENSLTYMEKLMLKKHR 309

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BLAST of B box-type domain-containing protein vs. Ensembl Mouse
Match: Zbbx (zinc finger, B-box domain containing [Source:MGI Symbol;Acc:MGI:2674085])

HSP 1 Score: 69.707 bits (169), Expect = 5.096e-13
Identity = 55/183 (30.05%), Postives = 85/183 (46.45%), Query Frame = 2

Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAID------SGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIEL---NGSGKNMSNRS-CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRST---PISTLNNRVSIPSPLF 634
            +L +EN++ME +L++ +    K KE+  ++G   +W +G    L N     S         S  K++LK+LK+E                       I +P   ++ ++    GS    + R  CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T   P S + + + I +  F
Sbjct:   34 QLELENQKMEKKLREFQSTWNKGKEELTTSG--YHWKSGNVSKLRNLSRMTSQSKGNPTKLSAGKVKLKLLKEE-----------------------IQVPAKQLSYKMAHSTGSENPKTKRKVCGQCENKAALLVCLECGEDYCSGCFAKMHQKGALKFHRTTLLQPKSQILSNILIAAHQF 191

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BLAST of B box-type domain-containing protein vs. Ensembl Mouse
Match: Zbbx (zinc finger, B-box domain containing [Source:MGI Symbol;Acc:MGI:2674085])

HSP 1 Score: 72.4034 bits (176), Expect = 1.676e-12
Identity = 63/205 (30.73%), Postives = 96/205 (46.83%), Query Frame = 2

Query:  467 CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRST---PISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGI-------DLSTKLPNLQKTLTIEHS----TETLSNNQEKNLLADLIQFT-PSLTYAEQLLLRKHR 1036
            CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T   P S + + + I +  F   +  N  N       +S   ++K K  +  +S     A    E  +P     ++ E  ++EE S Q F+EA+  WR G        ++  K P+  +   ++ +    TE ++           I+FT  SL+Y E L L+K+R
Sbjct:   17 CGQCENKAALLVCLECGEDYCSGCFAKMHQKGALKFHRTTLLQPKSQILSNILIAAHQFIKEE--NPPNEGNHPAEASSKSQQKPKALLQNSSEVGATASEGGEGENPRCK--VMWEMPFDEEASAQSFREALTQWRAGHQEENKEEEVHAKKPDSVEECEVQTNLKMWTEPIN-----------IEFTEDSLSYMETLWLKKYR 206

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Mouse
Match: Zbbx (zinc finger, B-box domain containing [Source:MGI Symbol;Acc:MGI:2674085])

HSP 1 Score: 71.633 bits (174), Expect = 1.945e-12
Identity = 63/207 (30.43%), Postives = 97/207 (46.86%), Query Frame = 2

Query:  461 RSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRST---PISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGI-------DLSTKLPNLQKTLTIEHS----TETLSNNQEKNLLADLIQFT-PSLTYAEQLLLRKHR 1036
            + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T   P S + + + I +  F   +  N  N       +S   ++K K  +  +S     A    E  +P     ++ E  ++EE S Q F+EA+  WR G        ++  K P+  +   ++ +    TE ++           I+FT  SL+Y E L L+K+R
Sbjct:   15 KVCGQCENKAALLVCLECGEDYCSGCFAKMHQKGALKFHRTTLLQPKSQILSNILIAAHQFIKEE--NPPNEGNHPAEASSKSQQKPKALLQNSSEVGATASEGGEGENPRCK--VMWEMPFDEEASAQSFREALTQWRAGHQEENKEEEVHAKKPDSVEECEVQTNLKMWTEPIN-----------IEFTEDSLSYMETLWLKKYR 206

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Mouse
Match: Zbbx (zinc finger, B-box domain containing [Source:MGI Symbol;Acc:MGI:2674085])

HSP 1 Score: 70.4774 bits (171), Expect = 2.349e-12
Identity = 65/206 (31.55%), Postives = 97/206 (47.09%), Query Frame = 2

Query:  461 RSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRST---PISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNL--QKTLTIEHSTETLSNNQEKNLLADL--------IQFT-PSLTYAEQLLLRKHR 1036
            + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T   P S + + + I +  F   +  N  N       +S   ++K K  +  +S     A    E  +P     ++ E  ++EE S Q F+EA+  WR G     K   +  +K + I      L + +E  +  +L        I+FT  SL+Y E L L+K+R
Sbjct:   15 KVCGQCENKAALLVCLECGEDYCSGCFAKMHQKGALKFHRTTLLQPKSQILSNILIAAHQFIKEE--NPPNEGNHPAEASSKSQQKPKALLQNSSEVGATASEGGEGENPRCK--VMWEMPFDEEASAQSFREALTQWRAGHQEENKEEEVHAKKPVFI-----FLDSVEECEVQTNLKMWTEPINIEFTEDSLSYMETLWLKKYR 211

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Mouse
Match: Zbbx (zinc finger, B-box domain containing [Source:MGI Symbol;Acc:MGI:2674085])

HSP 1 Score: 71.633 bits (174), Expect = 2.354e-12
Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 2

Query:  467 CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRST---PISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNL--QKTLTIEHSTETLSNNQEKNLLADL--------IQFT-PSLTYAEQLLLRKHR 1036
            CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T   P S + + + I +  F   +  N  N       +S   ++K K  +  +S     A    E  +P     ++ E  ++EE S Q F+EA+  WR G     K   +  +K + I      L + +E  +  +L        I+FT  SL+Y E L L+K+R
Sbjct:   17 CGQCENKAALLVCLECGEDYCSGCFAKMHQKGALKFHRTTLLQPKSQILSNILIAAHQFIKEE--NPPNEGNHPAEASSKSQQKPKALLQNSSEVGATASEGGEGENPRCK--VMWEMPFDEEASAQSFREALTQWRAGHQEENKEEEVHAKKPVFI-----FLDSVEECEVQTNLKMWTEPINIEFTEDSLSYMETLWLKKYR 211

[Close]

BLAST of B box-type domain-containing protein vs. UniProt/SwissProt
Match: sp|A8MT70|ZBBX_HUMAN (Zinc finger B-box domain-containing protein 1 OS=Homo sapiens OX=9606 GN=ZBBX PE=2 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.326e-22
Identity = 96/319 (30.09%), Postives = 142/319 (44.51%), Query Frame = 2

Query:  125 KLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTIS------AIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPIST----LNNRVSIPSPLFKA--PDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPS---LTYAEQLLLRKHR 1036
            +L  EN++ME +LQ+ +    KEKEDR S+  +  W +G  G L+N    +S         S  K++LK+LK++    V  T + K          E   PK      +NG       + CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T +      L N + +     K   PD         +    +  ++ K K  +L+ S+++      K         SLL EG ++EE S Q FQE ++ WR G     K  NL     ++ S E         +  + +        L+Y E+L L+KHR
Sbjct:   34 QLEFENQEMEKKLQEFRSTRNKEKEDRESS--EYYWKSGKVGKLVNQSYMMSQNKGNVVKFSAGKVKLKLLKEQIQEPVKPTVNYKM-----ANSSECEKPK------ING-------KVCGQCENKAALLVCLECGEDYCSGCFAKVHQKGALKLHRTTLLQAKSQILFNVLDVAHQFIKDVNPD---EPKEENNSTKETSKIQHKPKSVLLQRSSSEVEITTMKRAQRTKPRKSLLCEGSFDEEASAQSFQEVLSQWRTGNHDDNKKQNLHA--AVKDSLEECEVQTNLKIWREPLNIELKEDILSYMEKLWLKKHR 327

[Close]

BLAST of B box-type domain-containing protein vs. UniProt/SwissProt
Match: sp|Q0P5X5|ZBBX_MOUSE (Zinc finger B-box domain-containing protein 1 OS=Mus musculus OX=10090 GN=Zbbx PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.647e-11
Identity = 65/204 (31.86%), Postives = 96/204 (47.06%), Query Frame = 2

Query:  467 CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRST---PISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNL--QKTLTIEHSTETLSNNQEKNLLADL--------IQFT-PSLTYAEQLLLRKHR 1036
            CGQCE   A + C EC EDYC  CFA  H KGAL+ HR+T   P S + + + I +  F   +  N  N       +S   ++K K  +  +S     A    E  +P     ++ E  ++EE S Q F+EA+  WR G     K   +  +K + I      L + +E  +  +L        I+FT  SL+Y E L L+K+R
Sbjct:   17 CGQCENKAALLVCLECGEDYCSGCFAKMHQKGALKFHRTTLLQPKSQILSNILIAAHQFIKEE--NPPNEGNHPAEASSKSQQKPKALLQNSSEVGATASEGGEGENPRCK--VMWEMPFDEEASAQSFREALTQWRAGHQEENKEEEVHAKKPVFI-----FLDSVEECEVQTNLKMWTEPINIEFTEDSLSYMETLWLKKYR 211

[Close]

BLAST of B box-type domain-containing protein vs. TrEMBL
Match: K1QG02 (Zinc finger B-box domain containing protein 1 OS=Crassostrea gigas OX=29159 GN=CGI_10019098 PE=4 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 2.756e-33
Identity = 113/348 (32.47%), Postives = 171/348 (49.14%), Query Frame = 2

Query:   68 DIKMNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNY------KPTISAIDSGKKIR-LKMLKQETLPSVVRTTSLKSNVLRDVADGEI-LLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNK----EPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRN----GIDLSTKLPNLQKTLTIEHSTETL-----SNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQL 1048
            DI   LK   +K  +  + KL  E+++ME RL +L+LAM KEKE+R   G    WS G  G L +Y      KP+ S+   G   + +K+LK   L    R +  +   +  +A  E+ L P+           + +    CGQCEE +AAV+C +C+E YCP CF AFHLKGAL+KHRS P+S    R  + SP    P      +       +  +   +  ++   ++ N+    +   NS E  S   +G  L  G YNE  S   FQ+A+ AWR     G + +++ P   + L +E   +T      S  + K      I+F+ +L+YAE+LLL+KHR   +
Sbjct:   14 DISFRLKQHNVKRARDETRKLETESRKMEERLAELRLAMNKEKEERERQGG-GYWSRGQTGNLNSYATDVLNKPSSSSSSKGSGKKKVKILKDTPLDIPERPS--QPGTMAYIAKQEVSLTPR-----------QKVKGPKCGQCEEKKAAVSCVQCSELYCPGCFTAFHLKGALKKHRSLPVSATGPRQCM-SPRPAPPVTNGNGDFDTHSSENFDSYPSEGAIHPTNSAINRVRFDDHGRNSPEGASGSFDGPSLFTGNYNEAESAASFQQALAAWRTGKSEGGEPASETPRQPQVLKVETPRQTAPVGIDSGTETKKPPPVEIKFSSNLSYAERLLLKKHRRTDV 346

[Close]

BLAST of B box-type domain-containing protein vs. TrEMBL
Match: A0A3S1B5M1 (B box-type domain-containing protein (Fragment) OS=Elysia chlorotica OX=188477 GN=EGW08_016700 PE=4 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 5.206e-33
Identity = 115/367 (31.34%), Postives = 182/367 (49.59%), Query Frame = 2

Query:   68 DIKMNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTP--GALLNYKPTISAIDS------GKKIRLKMLKQETLPSVVRTT---SLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGI-----------------------DLSTKL---PNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPV 1057
            D+ M L+A  +++ +  +++L  +N++ME RL++LK  M KEKE+R   G    W  G    G+L  Y   + A  +      GKK ++K+L+ E +    R+    ++K    R +  G   +P+           K    R CGQCE+  A ++C +C+E YCP CFAAFH+KGAL++HRS PIS    RV + SP    P      +   S+ S S   +  + V     S+ ++P   ++   +P    SLL +G Y+E  S   FQ A+ AWR G                        + S +L   P     + ++ ST TL    E++ + + I+FT +L+YAE+LLL++HR  +LA V
Sbjct:   54 DMSMRLRAQNMRNARDQTKRLEEDNRKMEDRLRELKTVMTKEKEERERQGG-GFWGRGQAQVGSLTKYANEVLASKAERPPREGKKKKIKVLQDEPIEVPKRSAQPGTMKYIAQRKLPQGPGPVPRD----------KQKGPR-CGQCEDRVATLSCVQCSEIYCPGCFAAFHVKGALKQHRSVPISASGPRVCM-SP---HPSIDPQQSPRGSQASGSIVSQSASSVEGSGASSGRQPP-MAQAGAAPTAGRSLL-DGAYDESQSAASFQAALMAWREGPSSSPSNSSNSSSPSKDGERSARSNHSRRLVASPIKSPVIAVDESTGTL----EQSRVPE-IKFTSTLSYAERLLLKRHRRTELAEV 397

[Close]

BLAST of B box-type domain-containing protein vs. TrEMBL
Match: A0A267FB35 (B box-type domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig012047g1 PE=4 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 2.350e-32
Identity = 118/379 (31.13%), Postives = 175/379 (46.17%), Query Frame = 2

Query:   86 KASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLP-KSGINIELNGSGKNMSNRS------------------------------------CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNN-RVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLE------KKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTL-----------------TIEHSTETLSNNQEKNLLADL-IQFTPSLTYAEQLLLRKHR 1036
            K +LL   K +++++  E K+ME+RLQ+LKLAM  E++ R  +GN   WS G  GAL NYK    ++ +G K               +  +     ++ + D  I LP ++     + G+  +++NR                                     CGQCE+  AAV C ECAE+YC +CFAAFHLKGALRKHRS P+S +N  R S+   L         S+SS          E      ++N V  L +    E + ++ E ++    G+LL  GE +E  + + F+ A+  WR+G     + P  +                    T  H T T  +N  + L + L I+FT SL+YAEQLLL+KHR
Sbjct:   15 KQALLHQTKQSTKQMEEETKKMEVRLQELKLAMENERQQRAVSGNPGFWSRGQAGALTNYK----SVSAGAKKPAPPSSGPPPAGSTKAAASSVRKVKLIKDEPINLPDRTAAAAAIPGTLAHLANRGAAVANEDSNVRKPTGGRTRGGGGGGGVSAAGGGAPRCGQCEDRAAAVLCPECAEEYCARCFAAFHLKGALRKHRSLPLSAVNTPRQSLGQNLSTGAPAAAASSSSGGGGGGDGVFEDTSRQTRRNMVRQLLHGDEGESSSSTSEAMASNGGGALLT-GEVDERQNAEEFRRALAEWRSGGGGEAQKPTAEPAAARKKPAGQQQRQQPRQQTSSHGTATEDDNGGR-LSSRLEIKFTSSLSYAEQLLLQKHR 387

[Close]

BLAST of B box-type domain-containing protein vs. TrEMBL
Match: A0A1I8FXC8 (B box-type domain-containing protein OS=Macrostomum lignano OX=282301 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 5.959e-32
Identity = 116/379 (30.61%), Postives = 176/379 (46.44%), Query Frame = 2

Query:   86 KASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLP-KSGINIELNGSGKNMSNRS------------------------------------CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNN-RVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLE------KKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTL-----------------TIEHSTETLSNNQEKNLLADL-IQFTPSLTYAEQLLLRKHR 1036
            K +LL   K +++++  E K+ME+RLQ+LKLAM  E++ R  +GN   WS G  GAL NYK    ++ +G K               +  +     ++ + D  I LP ++     + G+  ++++R                                     CGQCE+  AAV C ECAE+YC +CFAAFHLKGALRKHRS P+S +N  R S+   L         S++S          E      ++N V  L +    E + ++ E ++    G+LL  GE +E  + + F+ A+  WR+G    ++ P  +                    T  H T T  +N  + L + L I+FT SL+YAEQLLL+KHR
Sbjct:   10 KQALLHQTKQSTKQMEEETKKMEVRLQELKLAMENERQQRAVSGNPGFWSRGQAGALTNYK----SVSAGAKKPAPPSSGPPPAGSTKAAASSVRKVKLIKDEPINLPDRTAAAAAIPGTLAHLASRGAAVANEDSNVRKPTGGRTRGGGGGGGVSAAGGGAPRCGQCEDRTAAVLCPECAEEYCARCFAAFHLKGALRKHRSLPLSAVNTPRQSLGQNLSTGAPAAAASSNSGGGGGGDGVFEDTSRQTRRNMVRQLLHGDEGESSSSTSEAMASNGGGALLT-GEVDERQNAEEFRRALAEWRSGGGGESQKPTAEPAAARKKPAGQQQRQQPRQQTSSHGTATEDDNGAR-LSSRLEIKFTSSLSYAEQLLLQKHR 382

[Close]

BLAST of B box-type domain-containing protein vs. TrEMBL
Match: A0A267H3C5 (B box-type domain-containing protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig021903g2 PE=4 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 7.307e-32
Identity = 116/379 (30.61%), Postives = 176/379 (46.44%), Query Frame = 2

Query:   86 KASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLP-KSGINIELNGSGKNMSNRS------------------------------------CGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNN-RVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLE------KKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTL-----------------TIEHSTETLSNNQEKNLLADL-IQFTPSLTYAEQLLLRKHR 1036
            K +LL   K +++++  E K+ME+RLQ+LKLAM  E++ R  +GN   WS G  GAL NYK    ++ +G K               +  +     ++ + D  I LP ++     + G+  ++++R                                     CGQCE+  AAV C ECAE+YC +CFAAFHLKGALRKHRS P+S +N  R S+   L         S++S          E      ++N V  L +    E + ++ E ++    G+LL  GE +E  + + F+ A+  WR+G    ++ P  +                    T  H T T  +N  + L + L I+FT SL+YAEQLLL+KHR
Sbjct:   15 KQALLHQTKQSTKQMEEETKKMEVRLQELKLAMENERQQRAVSGNPGFWSRGQAGALTNYK----SVSAGAKKPAPPSSGPPPAGSTKAAASSVRKVKLIKDEPINLPDRTAAAAAIPGTLAHLASRGAAVANEDSNVRKPTGGRTRGGGGGGGVSAAGGGAPRCGQCEDRTAAVLCPECAEEYCARCFAAFHLKGALRKHRSLPLSAVNTPRQSLGQNLSTGAPAAAASSNSGGGGGGDGVFEDTSRQTRRNMVRQLLHGDEGESSSSTSEAMASNGGGALLT-GEVDERQNAEEFRRALAEWRSGGGGESQKPTAEPAAARKKPAGQQQRQQPRQQTSSHGTATEDDNGAR-LSSRLEIKFTSSLSYAEQLLLQKHR 387

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000056392.1 (zinc finger B-box domain containing [Source:NCBI gene;Acc:103030668])

HSP 1 Score: 90.1225 bits (222), Expect = 8.175e-19
Identity = 93/327 (28.44%), Postives = 144/327 (44.04%), Query Frame = 2

Query:  137 ENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPI-STLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPM--VNGSL-----------LAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADL-IQFTP-SLTYAEQLLLRKHRNNQLAPVDMKY 1069
            ENK ME RLQ+L+  M +EKE+R  +G    W +    +    K     + +GK +++++LK+++LP   R    K    + V       P S     L G       + CGQCE   A + C EC EDYC  CFA FH KGAL+ HR   I + L   VS    L +   F+      +    S     K     +       EPA +++   + +  VN              L  G ++E  S++ FQ+A+N WR G     +         +  + E +    E+++   + I+F    L+Y E+LLL+KHR     P++  Y
Sbjct:   36 ENKDMENRLQELREIMRREKEEREKSG-ALRWKSAQASSGPRSKENRVKLSAGK-MKIRVLKEDSLPET-RKPPEKVPGPQPVDQ----TPGSSRKPRLKG-------KLCGQCEAKTAGLVCAECGEDYCVGCFARFHQKGALKHHRMISIQAELQTTVSSLDVLSR---FQK-QIGEERETPSQSTTSKVISPAVWRTHPAGEPACDTQTQKAQVLFVNEGDEIEDDEEDEGSLLNGCFDEVESSRSFQQALNEWRQGKQAEER--------RVPVTMEVMGTQAEESIQQPIHIEFREHGLSYMEKLLLKKHRRT---PIESYY 333

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Cavefish
Match: ENSAMXT00000050745.1 (zinc finger B-box domain containing [Source:NCBI gene;Acc:103030668])

HSP 1 Score: 82.0333 bits (201), Expect = 2.084e-15
Identity = 50/151 (33.11%), Postives = 75/151 (49.67%), Query Frame = 2

Query:  137 ENKQMELRLQQLKLAMVKEKEDRLSNGN---KSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHR 580
            ENK ME RLQ+L+  M +EKE+R  +G    KS  ++  P +  N         S  K+++++LK+++LP   +               ++  P+       +     +  + CGQCE   A + C EC EDYC  CFA FH KGAL+ HR
Sbjct:   36 ENKDMENRLQELREIMRREKEEREKSGALRWKSAQASSGPRSKENR-----VKLSAGKMKIRVLKEDSLPETRK------------PPEKVPGPQPVDQTPGSSRKPRLKGKLCGQCEAKTAGLVCAECGEDYCVGCFARFHQKGALKHHR 169

[Close]

BLAST of B box-type domain-containing protein vs. Ensembl Nematostella
Match: EDO40638 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S6L0])

HSP 1 Score: 98.9821 bits (245), Expect = 3.340e-23
Identity = 81/259 (31.27%), Postives = 122/259 (47.10%), Query Frame = 2

Query:  107 KKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGT---PGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNG 874
            K++T+E+L  E K+ME R++ LK  MVKEKEDR   G  + WS+G    P +  N K +    D G + ++K+L  E L     T + K   LR+            IN    G         CGQCE+ +A + C EC E YC  CF +FH KGALR H +  +   N          +AP                   E++++V +   ST++   +NS  +L     G+LL  G ++E+ S+  F +A+  WR+ 
Sbjct:   19 KQTTAEQLEQETKKMEERIRALKEQMVKEKEDREKIGG-TRWSSGKTINPQSAAN-KKSERKTDKGPR-KIKILTDEPLS----TYTSKKTALRE-----------SINETFTGP-------VCGQCEKAKATLACNECTESYCVSCFMSFHRKGALRAHTTRNLDQFNQGFHEEKQTSRAP-----------------KPEERSRVKLPHGSTSQ---QNS--SLEQKTGGALL-NGTFDEDESSASFAQALKEWRSA 229

[Close]

BLAST of B box-type domain-containing protein vs. Planmine SMEST
Match: SMESG000078465.1 (SMESG000078465.1)

HSP 1 Score: 1390.17 bits (3597), Expect = 0.000e+0
Identity = 749/753 (99.47%), Postives = 751/753 (99.73%), Query Frame = 2

Query:   77 MNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAEXXXXXXXXXXXXXXXXXXINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMSTRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSEIISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGKLTSEPSVLLNILANFSIYLPDNXXXXXXXXXXXXXXXXADVSLSNNKISYNFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPXXXXXXXXXXXLTKLNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDESEKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNSMDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYEDVYK 2335
            M + +SLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVSNSSQSRISSSRNLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAELLENQRLLQSNLLLETSLINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMSTRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSEIISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGKLTSEPSVLLNILANFSIYLPDNSNSSSLTQLSSKRPSSADVSLSNNKISYNFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPIDNEDDEIEEELTKLNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDESEKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNSMDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYEDVYK
Sbjct:    1 MYIFSSLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVSNSSQSRISSSRNLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAELLENQRLLQSNLLLETSLINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMSTRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSEIISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGKLTSEPSVLLNILANFSIYLPDNSNSSSLTQLSSKRPSSADVSLSNNKISYNFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPIDNEDDEIEEELTKLNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDESEKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNSMDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYEDVYK 753

[Close]

BLAST of B box-type domain-containing protein vs. Planmine SMEST
Match: SMESG000078465.1 (SMESG000078465.1)

HSP 1 Score: 1352.81 bits (3500), Expect = 0.000e+0
Identity = 729/729 (100.00%), Postives = 729/729 (100.00%), Query Frame = 2

Query:  149 MELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVXXXXXXXXXXXXXLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAEXXXXXXXXXXXXXXXXXXINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMSTRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSEIISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGKLTSEPSVLLNILANFSIYLPDNXXXXXXXXXXXXXXXXADVSLSNNKISYNFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPXXXXXXXXXXXLTKLNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDESEKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNSMDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYEDVYK 2335
            MELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVSNSSQSRISSSRNLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAELLENQRLLQSNLLLETSLINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMSTRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSEIISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGKLTSEPSVLLNILANFSIYLPDNSNSSSLTQLSSKRPSSADVSLSNNKISYNFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPIDNEDDEIEEELTKLNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDESEKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNSMDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYEDVYK
Sbjct:    1 MELRLQQLKLAMVKEKEDRLSNGNKSNWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVLRDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDYCPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVSNSSQSRISSSRNLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEEVSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLADLIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAELLENQRLLQSNLLLETSLINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMSTRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSEIISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGKLTSEPSVLLNILANFSIYLPDNSNSSSLTQLSSKRPSSADVSLSNNKISYNFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPIDNEDDEIEEELTKLNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDESEKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNSMDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYEDVYK 729

The following BLAST results are available for this feature:

BLAST of B box-type domain-containing protein vs. Ensembl Human
BLAST of B box-type domain-containing protein vs. Ensembl Celegans
BLAST of B box-type domain-containing protein vs. Ensembl Fly
BLAST of B box-type domain-containing protein vs. Ensembl Zebrafish
BLAST of B box-type domain-containing protein vs. Ensembl Xenopus
BLAST of B box-type domain-containing protein vs. Ensembl Mouse
BLAST of B box-type domain-containing protein vs. UniProt/SwissProt
BLAST of B box-type domain-containing protein vs. TrEMBL
BLAST of B box-type domain-containing protein vs. Ensembl Cavefish
BLAST of B box-type domain-containing protein vs. Ensembl Sea Lamprey
BLAST of B box-type domain-containing protein vs. Ensembl Yeast
BLAST of B box-type domain-containing protein vs. Ensembl Nematostella
BLAST of B box-type domain-containing protein vs. Ensembl Medaka
BLAST of B box-type domain-containing protein vs. Planmine SMEST

BLAST of B box-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ZBBX	2.452e-23	30.09	zinc finger B-box domain containing [Source:HGNC S...	[more]
ZBBX	2.452e-23	30.09	zinc finger B-box domain containing [Source:HGNC S...	[more]
ZBBX	2.761e-23	30.09	zinc finger B-box domain containing [Source:HGNC S...	[more]
ZBBX	3.388e-23	30.09	zinc finger B-box domain containing [Source:HGNC S...	[more]
ZBBX	3.388e-23	30.09	zinc finger B-box domain containing [Source:HGNC S...	[more]

BLAST of B box-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of B box-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of B box-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
zbbx	1.805e-23	28.24	zinc finger, B-box domain containing [Source:ZFIN;...	[more]
zbbx	1.805e-23	28.24	zinc finger, B-box domain containing [Source:ZFIN;...	[more]

BLAST of B box-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1


Match Name	E-value	Identity	Description
fanci	1.980e-25	28.88	FA complementation group I [Source:Xenbase;Acc:XB-...	[more]

BLAST of B box-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Zbbx	5.096e-13	30.05	zinc finger, B-box domain containing [Source:MGI S...	[more]
Zbbx	1.676e-12	30.73	zinc finger, B-box domain containing [Source:MGI S...	[more]
Zbbx	1.945e-12	30.43	zinc finger, B-box domain containing [Source:MGI S...	[more]
Zbbx	2.349e-12	31.55	zinc finger, B-box domain containing [Source:MGI S...	[more]
Zbbx	2.354e-12	31.86	zinc finger, B-box domain containing [Source:MGI S...	[more]

BLAST of B box-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 2


Match Name	E-value	Identity	Description
sp\|A8MT70\|ZBBX_HUMAN	1.326e-22	30.09	Zinc finger B-box domain-containing protein 1 OS=H...	[more]
sp\|Q0P5X5\|ZBBX_MOUSE	1.647e-11	31.86	Zinc finger B-box domain-containing protein 1 OS=M...	[more]

BLAST of B box-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
K1QG02	2.756e-33	32.47	Zinc finger B-box domain containing protein 1 OS=C...	[more]
A0A3S1B5M1	5.206e-33	31.34	B box-type domain-containing protein (Fragment) OS...	[more]
A0A267FB35	2.350e-32	31.13	B box-type domain-containing protein (Fragment) OS...	[more]
A0A1I8FXC8	5.959e-32	30.61	B box-type domain-containing protein OS=Macrostomu...	[more]
A0A267H3C5	7.307e-32	30.61	B box-type domain-containing protein (Fragment) OS...	[more]

BLAST of B box-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
ENSAMXT00000056392.1	8.175e-19	28.44	zinc finger B-box domain containing [Source:NCBI g...	[more]
ENSAMXT00000050745.1	2.084e-15	33.11	zinc finger B-box domain containing [Source:NCBI g...	[more]

BLAST of B box-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of B box-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of B box-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO40638	3.340e-23	31.27	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of B box-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of B box-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2


Match Name	E-value	Identity	Description
SMESG000078465.1	0.000e+0	99.47	SMESG000078465.1	[more]
SMESG000078465.1	0.000e+0	100.00	SMESG000078465.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30025791 ID=SMED30025791|Name=B box-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2428bp
TTATGTTGATTGTTTATTTTGTATCTATAGCTATTACCGCGTAATTTGAT
TTATTTGAAAATTTTATGATATTAAAATGAACTTGAAAGCTTCTTTATTA
AAAGACAAAAAATCAACTTCTGAAAAATTAAGAATTGAAAATAAGCAAAT
GGAATTAAGGTTACAGCAACTAAAATTAGCTATGGTTAAGGAAAAGGAAG
ATAGATTATCTAATGGAAATAAATCAAATTGGTCTACTGGTACGCCAGGT
GCTTTATTAAATTATAAACCAACAATATCTGCTATTGATAGTGGTAAAAA
AATTCGCTTAAAAATGCTTAAACAAGAAACTTTACCTTCTGTTGTTCGAA
CTACTAGCTTGAAATCGAATGTCCTTCGAGATGTTGCAGATGGAGAGATT
CTATTACCGAAAAGTGGCATAAATATTGAATTGAACGGTTCGGGAAAAAA
TATGTCTAATCGAAGTTGTGGTCAATGTGAAGAAATCCAAGCTGCAGTAA
ACTGTAAAGAATGCGCAGAAGATTATTGCCCAAAATGTTTTGCTGCCTTT
CATTTAAAAGGAGCTCTAAGAAAACATCGATCAACTCCGATTTCAACTTT
AAATAATCGAGTTTCTATACCTTCTCCTCTATTCAAAGCTCCAGACTTTA
AAAATGTATCAAATAGTTCTCAATCAAGAATTTCGAGCAGTCGTAATTTA
GAAAAGAAAAATAAAGTAAATATATTAGAAAATTCTACAAATAAAGAACC
TGCTGAAAATTCTAAAGAAAATCTTTCACCTATGGTCAATGGTTCATTGC
TAGCAGAGGGAGAATATAATGAAGAAGTTTCTAATCAATATTTTCAAGAA
GCAATGAATGCTTGGCGAAATGGGATAGATTTGTCAACCAAACTTCCAAA
TCTTCAAAAAACATTGACAATCGAACATTCGACCGAAACTTTATCAAATA
ATCAAGAGAAAAATCTTTTAGCAGATTTAATTCAATTTACTCCGTCTTTG
ACTTATGCAGAACAATTACTGTTGAGGAAGCACCGAAATAACCAATTAGC
TCCAGTTGATATGAAGTATATTCTCGATCGTTTGGCCAAAACAAATGAAG
CGGAACTATTAGAAAATCAAAGGCTTCTCCAATCAAATTTACTCTTAGAA
ACATCTTTAATAAACAGCAATACAGAAAAGGTTTTGAAAACTGACCAATA
TCATGTCGATTTTGACAGTGTTAATAAGTTACTGAATGAGGCTGAACTAA
TAACTGGGCGGCATTCTGCAATGTCTACCAGAAATATTTTACAATCTCCA
TTTAAAATTGAAGAGATTCCGTCCTATAGTGAAAGGAAATCGAACAATAA
TCAGTTTCCGGAAAAACTTGAAGTTGATGAAATCGAACAAGTGCAAGAAA
ATATAAGATCCAACTTCTCATCCGAAATTATTAGTCAGAAGAATAATGGA
AATGAAGAAATGATCAGAGCTATTAGTGATCTTCAACGACCAAAATCAGT
CATTAACAGAAATAATTTTTACGATAAGCCATTATCTGCTAGGCGGAAGT
CAGCACGTCAACATAAAGGGGGGAAACTTACTTCAGAACCATCGGTTTTA
TTGAACATATTAGCCAATTTCAGTATTTATCTACCTGACAACTCAAACAG
TTCCTCTCTAACTCAGTTATCCAGCAAACGTCCTTCATCAGCAGATGTGT
CATTATCAAATAATAAAATAAGCTATAATTTTTACAAAATTACTCCCAAT
TCATGGAAACCAGCTCAAGCATGGTCAGATGAATTATTAGAAAGAAAATC
GATGGTAAAATATGAAGAAAATAGCCTTTCTCCGATAGATAATGAAGATG
ATGAAATTGAAGAAGAATTAACGAAATTGAATTTATTATCAAGTCAAGCA
AAAAAGAGTGCTGAAGAAAGTTTACCTTTTTCTGAAGGTATGCCATCAAA
TAAATCTTCTATCAATGACAAAAATGACCGTAACTTACTTAGCGATGTTG
ATGGAGATTATTATGATGACGAATCGGAGAAAAATGAAATATTCGGTCAA
ATGGATACTCTCGAGCGCGAGTTGACAGTATTATCAAAACAAGAACAAGC
TATTCAGCAAAACAATTATGATGAGATGCTTATCGACTCTTTGGATATTA
ATAATGATAATATATGCCTGAATTCTATGGATTCCGATAAATTTTGTTTT
GAGGACTCACTCGACTTTCAACAGAGGTATTCCAATAATTCGAACGTGAT
TCATGAGCATTGCAATGGTGGAGATGACGAAGAAATGCAGGTGGAATGTA
GCTCAAGATTTGATGATTATGAAGATGTCTATAAATTGAATTAAAATTTG
TTATTTACTTTTTTCTGATTTTATTTTTCTTGTCATATTAATAATATATC
AATGAATGGGCTTTTAAAATATATGTTT

protein sequence of SMED30025791-orf-1

>SMED30025791-orf-1 ID=SMED30025791-orf-1|Name=SMED30025791-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=756bp
MNLKASLLKDKKSTSEKLRIENKQMELRLQQLKLAMVKEKEDRLSNGNKS
NWSTGTPGALLNYKPTISAIDSGKKIRLKMLKQETLPSVVRTTSLKSNVL
RDVADGEILLPKSGINIELNGSGKNMSNRSCGQCEEIQAAVNCKECAEDY
CPKCFAAFHLKGALRKHRSTPISTLNNRVSIPSPLFKAPDFKNVSNSSQS
RISSSRNLEKKNKVNILENSTNKEPAENSKENLSPMVNGSLLAEGEYNEE
VSNQYFQEAMNAWRNGIDLSTKLPNLQKTLTIEHSTETLSNNQEKNLLAD
LIQFTPSLTYAEQLLLRKHRNNQLAPVDMKYILDRLAKTNEAELLENQRL
LQSNLLLETSLINSNTEKVLKTDQYHVDFDSVNKLLNEAELITGRHSAMS
TRNILQSPFKIEEIPSYSERKSNNNQFPEKLEVDEIEQVQENIRSNFSSE
IISQKNNGNEEMIRAISDLQRPKSVINRNNFYDKPLSARRKSARQHKGGK
LTSEPSVLLNILANFSIYLPDNSNSSSLTQLSSKRPSSADVSLSNNKISY
NFYKITPNSWKPAQAWSDELLERKSMVKYEENSLSPIDNEDDEIEEELTK
LNLLSSQAKKSAEESLPFSEGMPSNKSSINDKNDRNLLSDVDGDYYDDES
EKNEIFGQMDTLERELTVLSKQEQAIQQNNYDEMLIDSLDINNDNICLNS
MDSDKFCFEDSLDFQQRYSNNSNVIHEHCNGGDDEEMQVECSSRFDDYED
VYKLN*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000034	epidermis
PLANA:0000099	neuron
PLANA:0000418	head
PLANA:0002089	reproductive organ

Vocabulary: **INTERPRO**
Term	Definition
IPR037688	ZBBX
IPR011528	NERD
IPR000315	Znf_B-box

Vocabulary: **cellular component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **molecular function**
Term	Definition
GO:0008270	zinc ion binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 8..42
None	No IPR available	COILS	Coil	Coil	coord: 659..679
None	No IPR available	COILS	Coil	Coil	coord: 587..607
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 612..632
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 612..634
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 218..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..234
IPR037688	Zinc finger B-box domain-containing protein	PANTHER	PTHR28634	FAMILY NOT NAMED	coord: 2..327
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 126..172 score: 9.855

Main menu

B box-type domain-containing protein

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Owlery

blazegraph-runner