SOXB1-1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30025778 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of SOXB1-1 vs. Ensembl Human
Match: SOX2 (SRY-box transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:11195]) HSP 1 Score: 151.754 bits (382), Expect = 9.386e-41 Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ Sbjct: 39 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 125
BLAST of SOXB1-1 vs. Ensembl Human
Match: SOX14 (SRY-box transcription factor 14 [Source:HGNC Symbol;Acc:HGNC:11193]) HSP 1 Score: 149.058 bits (375), Expect = 1.382e-40 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL 1109 K D +KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+ +++ Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYV 93
BLAST of SOXB1-1 vs. Ensembl Human
Match: SOX21 (SRY-box transcription factor 21 [Source:HGNC Symbol;Acc:HGNC:11197]) HSP 1 Score: 148.673 bits (374), Expect = 4.667e-40 Identity = 73/109 (66.97%), Postives = 82/109 (75.23%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF-------LGSAAMANVTAL 1142 K D VKRPMNAFMVWSR QRR+MAQ+NPKMHNSEISKRLG WK L+E +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ KF LG A A AL Sbjct: 3 KPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPAL 111
BLAST of SOXB1-1 vs. Ensembl Human
Match: SOX1 (SRY-box transcription factor 1 [Source:HGNC Symbol;Acc:HGNC:11189]) HSP 1 Score: 143.665 bits (361), Expect = 3.805e-37 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK +SE +K+PFIDEAKRLRA HM ++PDYKYRPRR Sbjct: 49 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
BLAST of SOXB1-1 vs. Ensembl Human
Match: SOX15 (SRY-box transcription factor 15 [Source:HGNC Symbol;Acc:HGNC:11196]) HSP 1 Score: 134.806 bits (338), Expect = 3.896e-36 Identity = 59/80 (73.75%), Postives = 69/80 (86.25%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKA 1085 ++VKRPMNAFMVWS QRR+MAQ NPKMHNSEISKRLG WK L E++K+PF++EAKRLRA H+ YPDYKYRPRRK K+ Sbjct: 47 EKVKRPMNAFMVWSSAQRRQMAQQNPKMHNSEISKRLGAQWKLLDEDEKRPFVEEAKRLRARHLRDYPDYKYRPRRKAKS 126
BLAST of SOXB1-1 vs. Ensembl Celegans
Match: sox-3 (SOX (Mammalian SRY box) family [Source:UniProtKB/TrEMBL;Acc:Q20201]) HSP 1 Score: 150.214 bits (378), Expect = 6.961e-42 Identity = 68/96 (70.83%), Postives = 81/96 (84.38%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANV 1133 D VKRPMNAFMVWSRGQRR+MAQDNPKMHNSEISKRLG WK LSE++K+PFIDEAKRLRA HM ++PDYKYRPRRK K+ + +++ + AM + Sbjct: 46 DHVKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKQLSEQEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKSSNLKQQPRLNIAMPTI 141
BLAST of SOXB1-1 vs. Ensembl Celegans
Match: sox-2 (Transcription factor sox-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21305]) HSP 1 Score: 151.754 bits (382), Expect = 1.286e-41 Identity = 67/87 (77.01%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 K DDRVKRPMNAFMVWSRGQR++MA +NPKMHNSEISKRLG WK LSE++K+PFIDEAKRLRA HM ++PDYKYRPRRK K+++K+ Sbjct: 55 KNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK 141
BLAST of SOXB1-1 vs. Ensembl Celegans
Match: sox-2 (Transcription factor sox-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21305]) HSP 1 Score: 151.754 bits (382), Expect = 1.286e-41 Identity = 67/87 (77.01%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 K DDRVKRPMNAFMVWSRGQR++MA +NPKMHNSEISKRLG WK LSE++K+PFIDEAKRLRA HM ++PDYKYRPRRK K+++K+ Sbjct: 55 KNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK 141
BLAST of SOXB1-1 vs. Ensembl Celegans
Match: sox-2 (Transcription factor sox-2 [Source:UniProtKB/Swiss-Prot;Acc:Q21305]) HSP 1 Score: 151.754 bits (382), Expect = 1.286e-41 Identity = 67/87 (77.01%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 K DDRVKRPMNAFMVWSRGQR++MA +NPKMHNSEISKRLG WK LSE++K+PFIDEAKRLRA HM ++PDYKYRPRRK K+++K+ Sbjct: 55 KNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK 141
BLAST of SOXB1-1 vs. Ensembl Celegans
Match: sox-4 (SOX (Mammalian SRY box) family [Source:UniProtKB/TrEMBL;Acc:Q17922]) HSP 1 Score: 103.219 bits (256), Expect = 1.573e-24 Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 3 Query: 840 KDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKA 1085 ++ R+KRPMNAFMVWS+ +R+++A K HNS+ISK LG W+ + E +K PF++ AK+LR H +PDY YRPRR+ + Sbjct: 117 REPRIKRPMNAFMVWSQQRRQQIAATGQKFHNSDISKMLGAEWRKMEEHEKVPFVERAKQLREEHFNAHPDYVYRPRRRKRV 198
BLAST of SOXB1-1 vs. Ensembl Fly
Match: Sox21a (gene:FBgn0036411 transcript:FBtr0330178) HSP 1 Score: 149.058 bits (375), Expect = 2.588e-39 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDK 1094 D +KRPMNAFMVWSRGQRR+MAQDNPKMHNSEISKRLG WK L+E K+PFIDEAKRLRA HM ++PDYKYRPRRK K ++K Sbjct: 119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNK 201
BLAST of SOXB1-1 vs. Ensembl Fly
Match: Sox21a (gene:FBgn0036411 transcript:FBtr0075748) HSP 1 Score: 148.673 bits (374), Expect = 2.730e-39 Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDK 1094 D +KRPMNAFMVWSRGQRR+MAQDNPKMHNSEISKRLG WK L+E K+PFIDEAKRLRA HM ++PDYKYRPRRK K ++K Sbjct: 119 DHIKRPMNAFMVWSRGQRRKMAQDNPKMHNSEISKRLGAEWKLLTEGQKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLNK 201
BLAST of SOXB1-1 vs. Ensembl Fly
Match: SoxN (gene:FBgn0029123 transcript:FBtr0079733) HSP 1 Score: 149.828 bits (377), Expect = 1.941e-38 Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 DRVKRPMNAFMVWSRGQRR+MA DNPKMHNSEISKRLG WK+LSE +K+PFIDEAKRLRA HM ++PDYKYRPRR Sbjct: 177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRR 252
BLAST of SOXB1-1 vs. Ensembl Fly
Match: SoxN (gene:FBgn0029123 transcript:FBtr0330210) HSP 1 Score: 150.599 bits (379), Expect = 3.986e-38 Identity = 64/76 (84.21%), Postives = 70/76 (92.11%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 DRVKRPMNAFMVWSRGQRR+MA DNPKMHNSEISKRLG WK+LSE +K+PFIDEAKRLRA HM ++PDYKYRPRR Sbjct: 177 DRVKRPMNAFMVWSRGQRRKMASDNPKMHNSEISKRLGAQWKDLSESEKRPFIDEAKRLRAVHMKEHPDYKYRPRR 252
BLAST of SOXB1-1 vs. Ensembl Fly
Match: Sox21b (gene:FBgn0042630 transcript:FBtr0075747) HSP 1 Score: 146.747 bits (369), Expect = 2.204e-37 Identity = 63/84 (75.00%), Postives = 75/84 (89.29%), Query Frame = 3 Query: 843 DDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDK 1094 ++ +KRPMNAFMVWSR QRR++AQDNPKMHNSEISKRLG WK L+EE+K+PFIDEAKRLRA HM ++PDYKYRPRRK KA+ + Sbjct: 245 EEHIKRPMNAFMVWSRLQRRKIAQDNPKMHNSEISKRLGAEWKLLTEEEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKALRR 328
BLAST of SOXB1-1 vs. Ensembl Zebrafish
Match: sox2 (SRY-box transcription factor 2 [Source:NCBI gene;Acc:378723]) HSP 1 Score: 151.369 bits (381), Expect = 7.105e-41 Identity = 67/87 (77.01%), Postives = 77/87 (88.51%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 DR+KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ Sbjct: 36 DRIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 122
BLAST of SOXB1-1 vs. Ensembl Zebrafish
Match: sox14 (SRY-box transcription factor 14 [Source:NCBI gene;Acc:557661]) HSP 1 Score: 148.288 bits (373), Expect = 1.328e-40 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL 1109 K D +KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+ +++ Sbjct: 3 KPADHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYV 93
BLAST of SOXB1-1 vs. Ensembl Zebrafish
Match: sox21b (SRY-box transcription factor 21b [Source:NCBI gene;Acc:406246]) HSP 1 Score: 147.902 bits (372), Expect = 2.162e-40 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 K D VKRPMNAFMVWSR QRR+MAQ+NPKMHNSEISKRLG WK L+E +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ KF Sbjct: 3 KPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKF 92
BLAST of SOXB1-1 vs. Ensembl Zebrafish
Match: sox19b (SRY-box transcription factor 19b [Source:NCBI gene;Acc:64812]) HSP 1 Score: 149.058 bits (375), Expect = 3.118e-40 Identity = 69/108 (63.89%), Postives = 85/108 (78.70%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMG 1169 D+VKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK L++ +K+PFIDEAKRLRA HM +YPDYKY+PRRK KA+ K+ +G +A L+ + + G Sbjct: 51 DKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDVEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTKALMKKDNPVGKYPLAAGNLLASAVAQGQG 158
BLAST of SOXB1-1 vs. Ensembl Zebrafish
Match: sox21a (SRY-box transcription factor 21a [Source:NCBI gene;Acc:30543]) HSP 1 Score: 144.05 bits (362), Expect = 5.946e-39 Identity = 66/90 (73.33%), Postives = 76/90 (84.44%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 K D VKRPMNAFMVWSR QRR+MA DNPKMHNSEISKRLGG WK LS+ +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ ++ Sbjct: 3 KPMDHVKRPMNAFMVWSRVQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDEAKRLRAVHMKEHPDYKYRPRRKPKNLIKKDRY 92
BLAST of SOXB1-1 vs. Ensembl Xenopus
Match: sox2 (SRY-box 2 [Source:NCBI gene;Acc:407873]) HSP 1 Score: 153.295 bits (386), Expect = 1.932e-41 Identity = 76/138 (55.07%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL--GSAAMANVTALSHQLGREMGY-----FNSGASGNGYLASGYASLAHSI 1238 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ G ++ +G +G ++ A NG+ GY + + Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGANPMTSGVGASLGAGVNQRMDTYAHMNGWTNGGYGMMQEQL 172
BLAST of SOXB1-1 vs. Ensembl Xenopus
Match: spag16 (sperm associated antigen 16 [Source:Xenbase;Acc:XB-GENE-949128]) HSP 1 Score: 147.902 bits (372), Expect = 2.982e-40 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL 1109 K D +KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+ +++ Sbjct: 3 KPVDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYV 93
BLAST of SOXB1-1 vs. Ensembl Xenopus
Match: gsr (glutathione reductase [Source:Xenbase;Acc:XB-GENE-997099]) HSP 1 Score: 145.976 bits (367), Expect = 3.585e-39 Identity = 67/90 (74.44%), Postives = 76/90 (84.44%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 K D VKRPMNAFMVWSR QRR+MAQ+NPKMHNSEISKRLG WK L+E +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ KF Sbjct: 3 KPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKF 92
BLAST of SOXB1-1 vs. Ensembl Xenopus
Match: sox3 (SRY-box 3 [Source:NCBI gene;Acc:493228]) HSP 1 Score: 144.436 bits (363), Expect = 2.797e-38 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 +RVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LS+ +K+PFIDEAKRLRA HM +YPDYKYRPRR Sbjct: 38 ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGADWKLLSDSEKRPFIDEAKRLRAVHMKEYPDYKYRPRR 113
BLAST of SOXB1-1 vs. Ensembl Xenopus
Match: sox17b.3 (SRY-box 17 alpha [Source:NCBI gene;Acc:395066]) HSP 1 Score: 124.79 bits (312), Expect = 1.209e-30 Identity = 51/94 (54.26%), Postives = 72/94 (76.60%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSA 1118 K + R++RPMNAFMVW++ +R+R+AQ NP +HN+E+SK LG WK+L+ K+PF+ EA+RLR H+ YPDYKYRPRRK + +++ FL SA Sbjct: 56 KAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLASKRPFVKEAERLRVQHIQDYPDYKYRPRRKKQVKREEEGFLPSA 149
BLAST of SOXB1-1 vs. Ensembl Mouse
Match: Sox2 (SRY (sex determining region Y)-box 2 [Source:MGI Symbol;Acc:MGI:98364]) HSP 1 Score: 152.14 bits (383), Expect = 5.638e-41 Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ Sbjct: 41 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 127
BLAST of SOXB1-1 vs. Ensembl Mouse
Match: Sox21 (SRY (sex determining region Y)-box 21 [Source:MGI Symbol;Acc:MGI:2654070]) HSP 1 Score: 150.214 bits (378), Expect = 8.756e-41 Identity = 74/109 (67.89%), Postives = 83/109 (76.15%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF-------LGSAAMANVTAL 1142 K D VKRPMNAFMVWSR QRR+MAQ+NPKMHNSEISKRLG WK L+E +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ KF LGS A A AL Sbjct: 3 KPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGSVADAEHPAL 111
BLAST of SOXB1-1 vs. Ensembl Mouse
Match: Sox14 (SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]) HSP 1 Score: 149.058 bits (375), Expect = 9.204e-41 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL 1109 K D +KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+ +++ Sbjct: 3 KPSDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYV 93
BLAST of SOXB1-1 vs. Ensembl Mouse
Match: Sox14 (SRY (sex determining region Y)-box 14 [Source:MGI Symbol;Acc:MGI:98362]) HSP 1 Score: 139.813 bits (351), Expect = 2.912e-38 Identity = 71/123 (57.72%), Postives = 87/123 (70.73%), Query Frame = 3 Query: 861 PMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLA 1229 PMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+ S+A+ + + H L + AS GY + SL+ Sbjct: 2 PMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKD---SSSAIQKMGEVPHTLATSALPY---ASTLGYQNGAFGSLS 118
BLAST of SOXB1-1 vs. Ensembl Mouse
Match: Sox1 (SRY (sex determining region Y)-box 1 [Source:MGI Symbol;Acc:MGI:98357]) HSP 1 Score: 143.665 bits (361), Expect = 2.462e-37 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK +SE +K+PFIDEAKRLRA HM ++PDYKYRPRR Sbjct: 49 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR 124
BLAST of SOXB1-1 vs. UniProt/SwissProt
Match: sp|O42569|SOX2_XENLA (Transcription factor Sox-2 OS=Xenopus laevis OX=8355 GN=sox2 PE=1 SV=1) HSP 1 Score: 155.221 bits (391), Expect = 2.105e-41 Identity = 77/138 (55.80%), Postives = 95/138 (68.84%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL--GSAAMANVTALSHQLGREMG-----YFNSGASGNGYLASGYASLAHSI 1238 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ G A++ +G +G ++ A NG+ GY + + Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGANAMTSGVGGSLGAGVNQRMDTYAHMNGWTNGGYGMMQEQL 172
BLAST of SOXB1-1 vs. UniProt/SwissProt
Match: sp|P48430|SOX2_CHICK (Transcription factor SOX-2 OS=Gallus gallus OX=9031 GN=SOX2 PE=1 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.668e-41 Identity = 78/140 (55.71%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL--------GSAAMANVTALSHQLGREMG-YFNSGASGNGYLASGYASLAHSI 1238 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ G+ M + LG + +S A NG+ GY + + Sbjct: 37 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGTNTMTTGVGVGATLGAGVNQRMDSYAHMNGWTNGGYGMMQEQL 176
BLAST of SOXB1-1 vs. UniProt/SwissProt
Match: sp|Q6NVN0|SOX2_XENTR (Transcription factor Sox-2 OS=Xenopus tropicalis OX=8364 GN=sox2 PE=2 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.024e-40 Identity = 76/138 (55.07%), Postives = 94/138 (68.12%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL--GSAAMANVTALSHQLGREMGY-----FNSGASGNGYLASGYASLAHSI 1238 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ G ++ +G +G ++ A NG+ GY + + Sbjct: 35 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKYTLPGGLLAPGANPMTSGVGASLGAGVNQRMDTYAHMNGWTNGGYGMMQEQL 172
BLAST of SOXB1-1 vs. UniProt/SwissProt
Match: sp|Q21305|SOX2_CAEEL (Transcription factor sox-2 OS=Caenorhabditis elegans OX=6239 GN=sox-2 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 1.636e-40 Identity = 67/87 (77.01%), Postives = 79/87 (90.80%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 K DDRVKRPMNAFMVWSRGQR++MA +NPKMHNSEISKRLG WK LSE++K+PFIDEAKRLRA HM ++PDYKYRPRRK K+++K+ Sbjct: 55 KNDDRVKRPMNAFMVWSRGQRKKMALENPKMHNSEISKRLGTEWKMLSEQEKRPFIDEAKRLRAIHMKEHPDYKYRPRRKTKSINKK 141
BLAST of SOXB1-1 vs. UniProt/SwissProt
Match: sp|P48432|SOX2_MOUSE (Transcription factor SOX-2 OS=Mus musculus OX=10090 GN=Sox2 PE=1 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 3.601e-40 Identity = 68/87 (78.16%), Postives = 77/87 (88.51%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ Sbjct: 41 DRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 127
BLAST of SOXB1-1 vs. TrEMBL
Match: A0A0A7M699 (SOXB1-1 (Fragment) OS=Schmidtea polychroa OX=50054 GN=soxb1-1 PE=2 SV=1) HSP 1 Score: 957.977 bits (2475), Expect = 0.000e+0 Identity = 548/553 (99.10%), Postives = 549/553 (99.28%), Query Frame = 3 Query: 42 VFIDQYLSLLNSILMMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTXXXXXXXXXXXXXQTNNFDCLKQFSQIDTNTLQTVQTIAAXXXXXXXXXXXXIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDXXXXXXXXXXXXXXXXXXXXXXKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNXXXXXXMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQXXXXXXXXXXXXXXXXXXXXXXXXLTASYNEGTQPL 1700 VFIDQYLSLLNSILMMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSSSSIDGNNVE NHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITS+SQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF GSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHS YPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEG QPL Sbjct: 1 VFIDQYLSLLNSILMMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSSSSIDGNNVETNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSNSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFXGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSXYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGAQPL 553
BLAST of SOXB1-1 vs. TrEMBL
Match: J7FQ58 (SoxB OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 941.799 bits (2433), Expect = 0.000e+0 Identity = 538/539 (99.81%), Postives = 539/539 (100.00%), Query Frame = 3 Query: 84 MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTXXXXXXXXXXXXXQTNNFDCLKQFSQIDTNTLQTVQTIAAXXXXXXXXXXXXIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDXXXXXXXXXXXXXXXXXXXXXXKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNXXXXXXMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQXXXXXXXXXXXXXXXXXXXXXXXXLTASYNEGTQPL 1700 MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSS+SSIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSSSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGTQPL Sbjct: 1 MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSTSSIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSSSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGTQPL 539
BLAST of SOXB1-1 vs. TrEMBL
Match: A0A2H1CRL6 (HMG box OS=Fasciola hepatica OX=6192 GN=D915_02355 PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 1.207e-46 Identity = 92/142 (64.79%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREM-GYFNSGASGNGYLASGYASLAHSIDSTPYSS 1259 KK+DRVKRPMNAFMVWSRGQRRRMAQ+NPKMHNSEISKRLG MWK L E +KKPFIDEAKRLRANHM QYPDYKYRPRRKHK +D+QKK G N T + + +G + G G +G G LA G ++ D+ SS Sbjct: 30 KKEDRVKRPMNAFMVWSRGQRRRMAQENPKMHNSEISKRLGSMWKGLGETEKKPFIDEAKRLRANHMAQYPDYKYRPRRKHKPLDRQKKTTG----LNATVMGNYMGSSLAGSGLVGRAGVG-LAPGSRTMTSLFDALGSSS 166
BLAST of SOXB1-1 vs. TrEMBL
Match: A0A183SQT9 (HMG box domain-containing protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS6587 PE=4 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 6.211e-46 Identity = 80/102 (78.43%), Postives = 92/102 (90.20%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTAL 1142 K+D+RVKRPMNAFMVWSRGQRRRMAQ+NPKMHNSEISKRLG MWK L+E DKKPFIDEAKRLRANHM+QYPDYKYRPRR+H+ ++KQKK + + A A V+ L Sbjct: 5 KRDERVKRPMNAFMVWSRGQRRRMAQENPKMHNSEISKRLGTMWKALNESDKKPFIDEAKRLRANHMSQYPDYKYRPRRRHRPLEKQKKAVAAMAAATVSGL 106
BLAST of SOXB1-1 vs. TrEMBL
Match: A0A504YLM5 (Transcription factor SOX-2 OS=Fasciola gigantica OX=46835 GN=FGIG_02653 PE=4 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 7.827e-46 Identity = 92/142 (64.79%), Postives = 105/142 (73.94%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREM-GYFNSGASGNGYLASGYASLAHSIDSTPYSS 1259 KK+DRVKRPMNAFMVWSRGQRRRMAQ+NPKMHNSEISKRLG MWK L E +KKPFIDEAKRLRANHM QYPDYKYRPRRKHK +D+QKK G N T + + +G + G G +G G LA G ++ D+ SS Sbjct: 410 KKEDRVKRPMNAFMVWSRGQRRRMAQENPKMHNSEISKRLGSMWKGLGETEKKPFIDEAKRLRANHMAQYPDYKYRPRRKHKPLDRQKKTTG----LNATVMGNYMGSSLAGTGLVGRAGVG-LAPGSRTMTSLFDALGSSS 546
BLAST of SOXB1-1 vs. Ensembl Cavefish
Match: sox19b (transcription factor Sox-19b [Source:NCBI gene;Acc:103045346]) HSP 1 Score: 150.214 bits (378), Expect = 7.682e-41 Identity = 84/151 (55.63%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREM-GYFNSGASGNGYLAS-----GYASLAHSID--STPYSSHMYYN 1274 D+VKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK L++ +K+PFIDEAKRLRA HM +YPDYKY+PRRK K + K+ G + TA L M GY A G GY A GY H D Y +H Y N Sbjct: 52 DKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTKPLLKKDAPPGKYPL--TTAQGQALSPRMDGY--GWAPGGGYTAMQSDALGYTQQLHRYDLSGLQYPTHTYMN 198
BLAST of SOXB1-1 vs. Ensembl Cavefish
Match: sox2 (SRY-box transcription factor 2 [Source:NCBI gene;Acc:378723]) HSP 1 Score: 149.058 bits (375), Expect = 1.082e-40 Identity = 67/87 (77.01%), Postives = 77/87 (88.51%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 +RVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ Sbjct: 37 ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 123
BLAST of SOXB1-1 vs. Ensembl Cavefish
Match: ENSAMXT00000004288.2 (pep primary_assembly:Astyanax_mexicanus-2.0:13:15067225:15068019:-1 gene:ENSAMXG00000004192.2 transcript:ENSAMXT00000004288.2 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 147.517 bits (371), Expect = 1.697e-40 Identity = 64/91 (70.33%), Postives = 79/91 (86.81%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL 1109 K D +KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK L+E +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+++++ Sbjct: 3 KPVDHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKERYV 93
BLAST of SOXB1-1 vs. Ensembl Cavefish
Match: sox21b (SRY-box transcription factor 21b [Source:NCBI gene;Acc:406246]) HSP 1 Score: 147.132 bits (370), Expect = 2.344e-40 Identity = 78/143 (54.55%), Postives = 96/143 (67.13%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQK---KFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYS 1256 K + VKRPMNAFMVWSR QRR+MAQ+NPKMHNSEISKRLG WK L+E +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K++ F +A A + ++G +G F S A +L SI + PYS Sbjct: 3 KSGEHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLRALHMKEHPDYKYRPRRKPKTLLKKEGKFAFPVPYGLAEHEA-ALKVGAGLGSFPSAALSEVFLNP-------SIPAHPYS 137
BLAST of SOXB1-1 vs. Ensembl Cavefish
Match: ENSAMXT00000026650.2 (transcription factor Sox-14-like [Source:NCBI gene;Acc:103039590]) HSP 1 Score: 144.821 bits (364), Expect = 1.314e-39 Identity = 65/90 (72.22%), Postives = 74/90 (82.22%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 K D VKRPMNAFMVWSRGQRRRMA +NPKMHNSEISKRLG WK LSE K+P+IDEAKRLRA HM ++P+YKYRPRRK K + + +F Sbjct: 3 KSVDHVKRPMNAFMVWSRGQRRRMAMENPKMHNSEISKRLGAEWKLLSEAQKRPYIDEAKRLRAQHMKEHPNYKYRPRRKSKGLLRNDRF 92
BLAST of SOXB1-1 vs. Ensembl Sea Lamprey
Match: sox1b (SRY-box transcription factor 1b [Source:NCBI gene;Acc:562710]) HSP 1 Score: 149.443 bits (376), Expect = 5.328e-40 Identity = 63/77 (81.82%), Postives = 71/77 (92.21%), Query Frame = 3 Query: 843 DDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 +DRVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK L+E +K+PFIDEAKRLRA HM ++PDYKYRPRR Sbjct: 56 NDRVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTEAEKRPFIDEAKRLRALHMKEHPDYKYRPRR 132
BLAST of SOXB1-1 vs. Ensembl Sea Lamprey
Match: sox4b (SRY-box transcription factor 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1274]) HSP 1 Score: 117.857 bits (294), Expect = 4.768e-29 Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = 3 Query: 852 VKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGS 1115 +KRPMNAFMVWS+ +RR++ + +P MHN+EISKRLG WK L E +K PFI EA+RLR HM YPDYKYRPR+K K +Q++ GS Sbjct: 62 IKRPMNAFMVWSQIERRKIMEQSPDMHNAEISKRLGRRWKQLKESEKVPFIREAERLRLKHMADYPDYKYRPRKKAKLAQQQQQQQGS 149
BLAST of SOXB1-1 vs. Ensembl Sea Lamprey
Match: sox12 (SRY-box transcription factor 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]) HSP 1 Score: 112.079 bits (279), Expect = 4.385e-27 Identity = 47/77 (61.04%), Postives = 61/77 (79.22%), Query Frame = 3 Query: 852 VKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHK 1082 +KRPMNAFMVWS+ +RR++ ++P +HN+EISKRLG WK L + +K PF+ EA+RLR HM YPDYKYRPR+K K Sbjct: 60 IKRPMNAFMVWSQIERRKIMMESPDVHNAEISKRLGRRWKQLKDCEKVPFMREAERLRLKHMADYPDYKYRPRKKAK 136
BLAST of SOXB1-1 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000010223.1 (pep scaffold:Pmarinus_7.0:GL478813:2555:9375:-1 gene:ENSPMAG00000009255.1 transcript:ENSPMAT00000010223.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 103.219 bits (256), Expect = 8.198e-27 Identity = 43/80 (53.75%), Postives = 65/80 (81.25%), Query Frame = 3 Query: 843 DDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHK 1082 + R+ RPMNAFMVW++ +RRR+A+ NP +HN+E+SK LG W+ L+ E ++P ++EA+RLR H++++PDYKYRPRRK + Sbjct: 3 EPRIPRPMNAFMVWAKDERRRLAKQNPDLHNAELSKMLGKSWRALTPESRRPCVEEAERLRLLHLSEHPDYKYRPRRKKQ 82
BLAST of SOXB1-1 vs. Ensembl Sea Lamprey
Match: sox10 (SRY-box transcription factor 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]) HSP 1 Score: 105.145 bits (261), Expect = 3.714e-25 Identity = 41/75 (54.67%), Postives = 61/75 (81.33%), Query Frame = 3 Query: 852 VKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRK 1076 VKRPMNAFMVW++ RR+++ P++HN+E+SK LG +W+ L+E +K+PF++EA+RLR H +PDYKY+PRR+ Sbjct: 112 VKRPMNAFMVWAQAARRKLSDQYPQLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRMQHKKDHPDYKYQPRRR 186
BLAST of SOXB1-1 vs. Ensembl Yeast
Match: ROX1 (Heme-dependent repressor of hypoxic genes; mediates aerobic transcriptional repression of hypoxia induced genes such as COX5b and CYC7; repressor function regulated through decreased promoter occupancy in response to oxidative stress; contains an HMG domain that is responsible for DNA bending activity; involved in the hyperosmotic stress resistance [Source:SGD;Acc:S000006269]) HSP 1 Score: 58.151 bits (139), Expect = 1.319e-9 Identity = 30/80 (37.50%), Postives = 46/80 (57.50%), Query Frame = 3 Query: 849 RVKRPMNAFMVWSRGQRRRM-----AQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRR 1073 ++ RP NAF+++ + R + AQ HNS ISK +G WK L EDK + + A++ + H +YP+YKY+P R Sbjct: 9 KIPRPKNAFILFRQHYHRILIDEWTAQGVEIPHNSNISKIIGTKWKGLQPEDKAHWENLAEKEKLEHERKYPEYKYKPVR 88
BLAST of SOXB1-1 vs. Ensembl Yeast
Match: ABF2 (Mitochondrial DNA-binding protein; involved in mitochondrial DNA replication and recombination, member of HMG1 DNA-binding protein family; activity may be regulated by protein kinase A phosphorylation; ABF2 has a paralog, IXR1, that arose from the whole genome duplication; human homolog TFAM can complement yeast abf2 mutant, rescuing the loss-of-mitochondrial DNA phenotype in a yeast abf2 strain [Source:SGD;Acc:S000004676]) HSP 1 Score: 45.4394 bits (106), Expect = 4.545e-6 Identity = 20/56 (35.71%), Postives = 35/56 (62.50%), Query Frame = 3 Query: 855 KRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRL 1022 KRP +A+ ++ + R + ++NP + +EISK G W+NL + K+ +I E K+L Sbjct: 44 KRPTSAYFLYLQDHRSQFVKENPTLRPAEISKIAGEKWQNLEADIKEKYISERKKL 99
BLAST of SOXB1-1 vs. Ensembl Nematostella
Match: EDO40934 (Predicted protein; Sox family protein B1 [Source:UniProtKB/TrEMBL;Acc:Q3S381]) HSP 1 Score: 147.132 bits (370), Expect = 1.801e-39 Identity = 64/84 (76.19%), Postives = 75/84 (89.29%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 DRVKRPMNAFMVWSR +RR+MAQDNPKMHNSEISKRLG WK LSE++K+P+IDEA+RLRA HM ++PDYKYRPRRK K + K+ Sbjct: 31 DRVKRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQEKRPYIDEARRLRAVHMKEHPDYKYRPRRKSKTLLKK 114
BLAST of SOXB1-1 vs. Ensembl Nematostella
Match: EDO32666 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUF3]) HSP 1 Score: 139.043 bits (349), Expect = 1.095e-37 Identity = 60/87 (68.97%), Postives = 76/87 (87.36%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 K + VKRPMNAFMVWSR +RR++AQ+NPKMHNSEISKRLG WK L+++DKKPF++EAK+LRA HM ++PDYKYRPRRK K++ K+ Sbjct: 5 KPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLADDDKKPFVEEAKKLRAQHMKEHPDYKYRPRRKPKSLLKK 91
BLAST of SOXB1-1 vs. Ensembl Nematostella
Match: EDO44142 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RWK8]) HSP 1 Score: 123.635 bits (309), Expect = 4.618e-31 Identity = 60/120 (50.00%), Postives = 83/120 (69.17%), Query Frame = 3 Query: 837 KKDD---RVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANV--TALSHQLGRE-MGYFN 1178 +KDD R+KRPMNAFMVW++ +RRR+A NP++HN+E+SK LG W+ L+ K+PF+DEA+RLR HM YP+YKYRPRR+ + K+ G+AA + V TA G+E + FN Sbjct: 65 EKDDETERIKRPMNAFMVWAQVERRRLADANPELHNAELSKMLGLTWRALNSTQKRPFVDEAERLRLQHMQDYPNYKYRPRRRKHSKRAAKRSTGAAAGSKVNGTACQKSSGQETVSRFN 184
BLAST of SOXB1-1 vs. Ensembl Nematostella
Match: EDO47688 (Predicted protein; Sox family protein 2 [Source:UniProtKB/TrEMBL;Acc:Q3S383]) HSP 1 Score: 112.464 bits (280), Expect = 2.779e-28 Identity = 50/88 (56.82%), Postives = 68/88 (77.27%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQK 1100 K D +KRPMNA+MVWSR +RRR+A++ P+M NSEISKRLG W +L+ ++K+P+++EAKRLR H +PDYKY+P+RK K K K Sbjct: 3 KPGDHIKRPMNAYMVWSRKERRRIAEECPRMLNSEISKRLGLEWNSLTLDEKQPYVEEAKRLRELHKKDHPDYKYQPKRKPKTSPKLK 90
BLAST of SOXB1-1 vs. Ensembl Nematostella
Match: EDO39449 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9V3]) HSP 1 Score: 107.071 bits (266), Expect = 4.212e-28 Identity = 48/78 (61.54%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 843 DDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRK 1076 D +KRPMNAFMVWSR +RR++A P M N EISK LG W LSEE+K+PF+ EAKRLR H +YPDY Y+PRR+ Sbjct: 6 DQHIKRPMNAFMVWSRTERRKLALKYPNMLNCEISKLLGAEWSRLSEEEKRPFVTEAKRLRTIHNQKYPDYSYKPRRR 83
BLAST of SOXB1-1 vs. Ensembl Medaka
Match: sox14 (SRY-box transcription factor 14 [Source:NCBI gene;Acc:100304454]) HSP 1 Score: 148.288 bits (373), Expect = 1.119e-40 Identity = 65/91 (71.43%), Postives = 78/91 (85.71%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFL 1109 K D +KRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+P+IDEAKRLRA HM ++PDYKYRPRRK K + K+ +++ Sbjct: 3 KPADHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYV 93
BLAST of SOXB1-1 vs. Ensembl Medaka
Match: sox2 (SRY-box transcription factor 2 [Source:NCBI gene;Acc:378723]) HSP 1 Score: 148.673 bits (374), Expect = 1.125e-40 Identity = 67/87 (77.01%), Postives = 77/87 (88.51%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 +RVKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ K+ Sbjct: 38 ERVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTKTLMKKDKY 124
BLAST of SOXB1-1 vs. Ensembl Medaka
Match: sox21 (SRY-box transcription factor 21 [Source:NCBI gene;Acc:100304456]) HSP 1 Score: 147.902 bits (372), Expect = 2.001e-40 Identity = 68/90 (75.56%), Postives = 76/90 (84.44%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 K D VKRPMNAFMVWSR QRR+MAQ+NPKMHNSEISKRLG WK LSE +K+PFIDEAKRLRA HM ++PDYKYRPRRK K + K+ KF Sbjct: 3 KPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKF 92
BLAST of SOXB1-1 vs. Ensembl Medaka
Match: sox19b (transcription factor Sox-19a [Source:NCBI gene;Acc:110017107]) HSP 1 Score: 147.132 bits (370), Expect = 1.771e-39 Identity = 65/84 (77.38%), Postives = 75/84 (89.29%), Query Frame = 3 Query: 846 DRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 D+VKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK LS+ +K+PFIDEAKRLRA HM +YPDYKY+PRRK K + K+ Sbjct: 53 DKVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSDAEKRPFIDEAKRLRAVHMKEYPDYKYKPRRKTKPLLKK 136
BLAST of SOXB1-1 vs. Ensembl Medaka
Match: ENSORLT00000029054.1 (transcription factor Sox-14-like [Source:NCBI gene;Acc:111949029]) HSP 1 Score: 144.05 bits (362), Expect = 2.993e-39 Identity = 62/87 (71.26%), Postives = 76/87 (87.36%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQ 1097 K + +KRPMNAFMVWSRGQRR+MA++NPKMHNSEISKRLG WK LS+ DK+PFIDEAKRLRA H+ ++PDYKYRPRRK +A+ ++ Sbjct: 3 KPVEHIKRPMNAFMVWSRGQRRKMARENPKMHNSEISKRLGAEWKTLSDSDKRPFIDEAKRLRAQHLREHPDYKYRPRRKPRALLRR 89
BLAST of SOXB1-1 vs. Planmine SMEST
Match: SMESG000011244.1 (SMESG000011244.1) HSP 1 Score: 939.102 bits (2426), Expect = 0.000e+0 Identity = 539/539 (100.00%), Postives = 539/539 (100.00%), Query Frame = 3 Query: 84 MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTXXXXXXXXXXXXXQTNNFDCLKQFSQIDTNTLQTVQTIAAXXXXXXXXXXXXIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDXXXXXXXXXXXXXXXXXXXXXXKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNXXXXXXMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQXXXXXXXXXXXXXXXXXXXXXXXXLTASYNEGTQPL 1700 MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSSSSIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSSSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGTQPL Sbjct: 1 MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSSSSIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSSSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGTQPL 539
BLAST of SOXB1-1 vs. Planmine SMEST
Match: SMESG000011244.1 (SMESG000011244.1) HSP 1 Score: 937.562 bits (2422), Expect = 0.000e+0 Identity = 538/538 (100.00%), Postives = 538/538 (100.00%), Query Frame = 3 Query: 87 MSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTXXXXXXXXXXXXXQTNNFDCLKQFSQIDTNTLQTVQTIAAXXXXXXXXXXXXIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDXXXXXXXXXXXXXXXXXXXXXXKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNXXXXXXMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQXXXXXXXXXXXXXXXXXXXXXXXXLTASYNEGTQPL 1700 MSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSSSSIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSSSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGTQPL Sbjct: 1 MSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYLSFLEHNDPANYSSALSSYYQKLRNTSVNFDVPNDVYDNIYSNSLQSEKNPYGSYFSSPTLDSKSFDDSKLSSQTNNFDCLKQFSQIDTNTLQTVQTIAALHSRHHLSSSSSIDGNNVEPNHKSDSSPNPPTTQCQGAHSFPTLNNSSCQQRPGLRTPKSEDIDRNQNDYFDDCEFSKDQTQNVTTANSQTSQSNITSSSQKKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKFLGSAAMANVTALSHQLGREMGYFNSGASGNGYLASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQSHLSSTPNAVSNYMSGLVSPHSASDYSLPPYGSNYISNSSAASAMTQNGLKMNCSSDPIDFDMTQSLYMQMPPSAAMYDLPDMSGMLAGVPQSIYHPSYHHHSSSSSSAASGKPHSLTASYNEGTQPL 538
BLAST of SOXB1-1 vs. Planmine SMEST
Match: SMESG000067682.1 (SMESG000067682.1) HSP 1 Score: 153.68 bits (387), Expect = 7.839e-40 Identity = 91/181 (50.28%), Postives = 109/181 (60.22%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKA-----------MDKQ-KKFLG--SAAMANVTALSHQLGREMGYFN-SGASGNGYL------ASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQ 1316 KK+ R++RPMNAFMVWSRGQRR+M+ +NPKMHNSEISKRLG MWK+LSE DKKPFIDEAKRLRANH ++PDYKYRPRRK K DK KK++ S N S L + + S N YL +GY++ +D P MYY +YP QGP Q Sbjct: 218 KKEARIRRPMNAFMVWSRGQRRKMSVENPKMHNSEISKRLGSMWKSLSEIDKKPFIDEAKRLRANHQKEHPDYKYRPRRKSKIAANSHPPTNMPQDKHGKKYVNPTSGHHNNQNIASTSLSSDFHFQQLQQDSANIYLGQQTGQGTGYSNYPVCLD--PNYGTMYYTPNGVIYP--QGPLQ 394
BLAST of SOXB1-1 vs. Planmine SMEST
Match: SMESG000060099.1 (SMESG000060099.1) HSP 1 Score: 153.68 bits (387), Expect = 7.839e-40 Identity = 91/181 (50.28%), Postives = 109/181 (60.22%), Query Frame = 3 Query: 837 KKDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKA-----------MDKQ-KKFLG--SAAMANVTALSHQLGREMGYFN-SGASGNGYL------ASGYASLAHSIDSTPYSSHMYYNMRHSLYPNNQGPFQ 1316 KK+ R++RPMNAFMVWSRGQRR+M+ +NPKMHNSEISKRLG MWK+LSE DKKPFIDEAKRLRANH ++PDYKYRPRRK K DK KK++ S N S L + + S N YL +GY++ +D P MYY +YP QGP Q Sbjct: 218 KKEARIRRPMNAFMVWSRGQRRKMSVENPKMHNSEISKRLGSMWKSLSEIDKKPFIDEAKRLRANHQKEHPDYKYRPRRKSKIAANSHPPTNMPQDKHGKKYVNPTSGHHNNQNIASTSLSSDFHFQQLQQDSANIYLGQQTGQGTGYSNYPVCLD--PNYGTMYYTPNGVIYP--QGPLQ 394
BLAST of SOXB1-1 vs. Planmine SMEST
Match: SMESG000077970.1 (SMESG000077970.1) HSP 1 Score: 148.673 bits (374), Expect = 1.176e-39 Identity = 66/89 (74.16%), Postives = 78/89 (87.64%), Query Frame = 3 Query: 840 KDDRVKRPMNAFMVWSRGQRRRMAQDNPKMHNSEISKRLGGMWKNLSEEDKKPFIDEAKRLRANHMTQYPDYKYRPRRKHKAMDKQKKF 1106 K+D VKRPMNAFMVWSRGQRR+MAQ+NPKMHNSEISKRLG WK+L+E K+PFIDEAKRLRA HM +PDYKYRPRRK K++ ++ K+ Sbjct: 65 KEDHVKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKHLTELQKRPFIDEAKRLRAIHMKDHPDYKYRPRRKPKSIFRKDKY 153 The following BLAST results are available for this feature:
BLAST of SOXB1-1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SOXB1-1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SOXB1-1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 2
BLAST of SOXB1-1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of SOXB1-1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SOXB1-1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30025778 ID=SMED30025778|Name=SOXB1-1|organism=Schmidtea mediterranea sexual|type=transcript|length=1738bpback to top protein sequence of SMED30025778-orf-1 >SMED30025778-orf-1 ID=SMED30025778-orf-1|Name=SMED30025778-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=540bp MMSATDYTKINSKFHLSTDIRGISTQSPKSHLFPQDSITPYSYSGPESYYback to top Aliases
The feature 'SOXB1-1' has the following synonyms
Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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