G_PROTEIN_RECEP_F1_2 domain-containing protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30025775 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 3
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Match: frpr-10 (FMRFamide Peptide Receptor family [Source:UniProtKB/TrEMBL;Acc:O45096]) HSP 1 Score: 50.0618 bits (118), Expect = 1.355e-6 Identity = 53/236 (22.46%), Postives = 109/236 (46.19%), Query Frame = 3 Query: 384 FYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVG--TVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIR---RSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQE--LSILILSMKSDFSFVLHCWVCDKF-GAALKRMFC 1067 F+R+ IF L S W + ++R++ V +P + +R+ ++ IT+ + + + K+PS +E ++++ + E+ K+ E + ++ + ++P+ ++IF+NA +I +R R+ M + K E+ ERK+T + + M F IC P ++ Y N Q LS +++ + S + +++C +F AALK + C Sbjct: 27 FWRVTVSIFPLSLIAQAGSVWTYVAVTVDRFIAVCFP-IKRRVWSTRSNTITVLFVITFISAIFKLPSF-----FEVRLDHNGEVEPTELRKNEFYIEFYLFYLY-VTFIQLIPWTLIIFLNAIIIHKVRLAYRAQEAMVHNSGKLNTKREDAERKVTVMATVMTMIFIICNIP-------PGINYLVDRYSNPTVYRQRIPLSNVLVCVNSASNMMIYCVFNSRFRRAALKLLGC 248
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Match: frpr-3 (FMRFamide Peptide Receptor family; VRFamide receptor 1 [Source:UniProtKB/TrEMBL;Acc:G5EG36]) HSP 1 Score: 49.2914 bits (116), Expect = 2.711e-6 Identity = 47/171 (27.49%), Postives = 78/171 (45.61%), Query Frame = 3 Query: 393 IYQY-IFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIE-------KSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFIC 881 +Y Y + I+F++V S WL + I+RYL V +PF+ +R LIT VG V++ + L+ +E +N D + IE ++ +F LW + P VL +N ++ TI +S R+ A+ R E +MI V++ F +C Sbjct: 82 VYLYPVTIMFQSV---SVWLLVSITIDRYLAVCHPFMVNTYCTRNRALIT----VGVVVIFSVAYNLIRIWEYTINFDVAPENRTIEDLVVPKLRANPHFLLWYQNVATLVSQFAFPLTVLCVLNIQVARTIIEASEQRRELVASVKR-----EHSTAKMMIMVVLVFLVC 240
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Match: gfra3 (GDNF family receptor alpha 3 [Source:Xenbase;Acc:XB-GENE-988962]) HSP 1 Score: 49.6766 bits (117), Expect = 5.902e-6 Identity = 45/222 (20.27%), Postives = 100/222 (45.05%), Query Frame = 3 Query: 444 WLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHNFELWQ-SWIVDF-SLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNINPE-RENTIN 1100 W ++L ERY+V+ P R+ H L +F +V + + IP + +Y + + E + ++ E+ ++I+ F + + P V+ +L+ +R+ S + + R E+++T +++ +I+AF IC P+ ++ L H + L + S ++ +++ ++ +F L +MF +PE +E+ +N Sbjct: 121 WSLSVLAFERYIVICRPLGNLRLQGKHSALAIIFVWVFSFVWTIPPTMGWSSYTT------SKIGTTCEPNWYSGEMRDHTYIITFLTTCFVFPLLVIFMSYGKLMRKLRKVSDTQGRLGSTRK-----PEKEVTRMVVIMILAFLICWTPYAAFSILITAH----PTIDLDPRLAAIPAFFAKTASMYNPIIYVYMNKQFRRCLYQMFNINDPEAKESNLN 327
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Match: sp|O42490|OPSP_PETMA (Pineal opsin OS=Petromyzon marinus OX=7757 PE=1 SV=1) HSP 1 Score: 51.9878 bits (123), Expect = 6.440e-6 Identity = 50/213 (23.47%), Postives = 93/213 (43.66%), Query Frame = 3 Query: 333 IASLDYFVLNYTINMPIFYRIYQYIFILFEAVLL----------LSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINY-ESIVNNDFQQHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITY----TALSNVHL 926 +A+ D V ++ F I Y F+ A +L ++ W +L ERY V+ P R+ + H L +V ++ +P ++ +Y S++ + + E H F L + FS I P V+ F +LI ++++S R + R E+++T +++ +I+AF +C P+ T+ TA +HL Sbjct: 89 LAAADLLVSAIGGSVSFFTNIKGYFFLGVHACVLEGFAVTYFGVVALWSLALLAFERYFVICRPLGNFRLQSKHAVLGLAVVWVFSLACTLPPVLGWSSYRPSMIGTTCEPNWYSGELHDHTFIL-----MFFSTCFIFPLAVIFFSYGKLIQKLKKASETQRGLESTRR-----AEQQVTRMVVVMILAFLVCWMPYATFSIVVTACPTIHL 291
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3SPR4 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS6974 PE=4 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.274e-29 Identity = 109/362 (30.11%), Postives = 179/362 (49.45%), Query Frame = 3 Query: 171 RVIKNYLTPLMXXXXXXXXXXXXXXXHKRNL-WISTRIYITAXXXXXXXXXXXXTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHN--------------------------------------------FELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIEN---EERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNINPERENTINYSMH 1112 +VI++ +TP + +IS+ ++ TL+++H++ L I+ IY+ +G VD+L L+ + I SLDY ++ ++ +F L SNWL T IER + +S PF K+I HR+++ F+ +VL IP+L+L I + +Q+ + K FE QSW+V F LF I+PF L + L+ ++ S RF+RQ+C + N EE ++T + +C+I AFFICQ PF+ Y A ++V L + + S+++ L L L++KSD +FV HCW+ +F AL+RM C+ + NT + H Sbjct: 35 QVIRHIITPAVCLISMGALIFTLILLHRKKLVRITALIYLKCMGFVDLLSLIFIFILSLDYSSKSFFKAQKFSPALHGCLF----GFLFTSNWLMTAQAIERTIAISKPFKAKQIREKHRRIVVSVIFILSVLFTIPTLVLDI----MQTERYQEDPGDFHKDGDGFFHFFNKFKNDINLPQFDINQTYSLESFVPVSPSKDKWPRYLVIFEKVQSWLVYFVLFFILPFVCLCLTSFYLLSAVKMSGRFVRQHCIRGGVEFRNTLREEARMTVLTLCLIGAFFICQSPFVIYQAFTHVGLLSRP-SHEMSLVRALIHLALALKSDCTFVFHCWLNQRFALALRRMLCSFS---SNTASGRCH 384
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A5K3F5F3 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.906e-29 Identity = 112/391 (28.64%), Postives = 193/391 (49.36%), Query Frame = 3 Query: 105 INSSLNKSTDSLIIPTMIKIQNRVIKNYLTPLMXXXXXXXXXXXXXXXHKRNL-WISTRIYITAXXXXXXXXXXXXTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLI---------------------------------NYESIVN--------------------------NDFQQHTQEIEKS----LHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIEN---EERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNIN 1076 I S L+ S ++L+ VI++++TP + ++SI ++ TL +H+R L ++ IY+ +G +D+L L++L ++SLDYF+ + +++ + ++ +LL SNWL T IER + +S PF K+I HR++ V +L+ IP+L+L I N+E + N + Q T +E S L ++ Q+W+V F +F ++PF L + L+ +R S RF+RQ+C + N EE ++T +++C+I AFFICQ PF+ Y+A V + + +G S+L+ L L++KSD +FV HCW+ +F AL+RM C+ + Sbjct: 26 IESLLSGSDEALVT------SYHVIRHFITPAICLLSIGALIFTLFFLHRRKLVRVTALIYLKFMGFIDLLSLIVLFVSSLDYFMSSRQVHVYYTSAFARCLYGCLLGLLLTSNWLMTAQAIERTIAISRPFKAKQIREKHRRIAVSAICVLALLLTIPTLVLDIMELTRYRQCWGTPHSDKPCIDIDQVAERFQMAYNHEHMTNALNETTSMLYLKLIQQGKHSKPETFSHTGHQLTTYVEDSWPEPLKQYQAAQAWLVHFFIFFVLPFVFLCLASFCLLSAVRMSGRFVRQHCIRGGVEFRNTLREEARMTILILCLIGAFFICQSPFVAYSACHKVGILSKP-SHGHSLLRAAITLALALKSDCTFVFHCWLNQRFALALRRMLCSFS 409
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: R7TMC4 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Capitella teleta OX=283909 GN=CAPTEDRAFT_215199 PE=4 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 7.427e-29 Identity = 89/320 (27.81%), Postives = 176/320 (55.00%), Query Frame = 3 Query: 150 TMIKIQNRVIKNYLTPLMXXXXXXXXXXXXXXXHKRNLWISTRIYITAXXXXXXXXXXXXTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHR-KLITLFCFVGTVLVKIPSL---ILLINYESIVNNDFQ-QHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMR-------QYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVH--LFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFC 1067 T I RV Y+ P++ I I++T++++ ++N+ ST ++ AL + D+L L++L+ ++ + ++T F Y I L+ S WLT +L +ERY+ + PFL ++ + R ++ + +V LV++P+ ++ ++++ N + E+ ++H + W+VD L I+PF +L+ +N RLI +R+S+R+++ I+ EE +IT ++I +I+ FFICQ P++ YTA+ +++ + G + +L+I++L+ KS +F+++CW +KF A LK++FC Sbjct: 25 TAASITLRVTNQYILPIICCFGILGIILTVIVLSRKNMCTSTNCHLMALAIADLLFLLLLSTRQIENHLTHWTSGYYQFSIYLDYAVIFMHVFLMASIWLTVMLAVERYIAICQPFLAAKVCSVKRARIFVVSIYVFAFLVRLPAFWEHEVVTRFDTLSNTSISYTKSTELASNVHYLRI-NPWVVDGILMSILPFILLLVLNVRLIWEVRKSTRYLQATMVASVSAPGRSAGTIKKEELQITVMLISIIIVFFICQAPYVVYTAIFSINKDILSSGSSTGFLIFHQLAIVVLAFKSAVNFIIYCWFSEKFWATLKKIFC 343
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A210PPP6 (FMRFamide receptor OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT25244 PE=4 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.228e-25 Identity = 82/281 (29.18%), Postives = 146/281 (51.96%), Query Frame = 3 Query: 252 KRNLWISTRIYITAXXXXXXXXXXXXTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHR-KLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHN---FELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCA---NRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDY---KNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMF 1064 ++N+ ST Y+T+L + D+ LVIL+ L+Y + Y ++ Y Y IF+ LL S WLT +L IERY+ + +P I R ++I + FV + ++P+ + + + L +++ +W+VD + I+PF L+F+N RLI+ IR+S++++R + N + NE+ KIT ++I +I FF+CQ P++ A N+H + ++ + +I +L++KS +F+L+CW +KF KR F Sbjct: 84 RKNMCTSTNCYLTSLSIADLGFLVILSTKFLEYRITGYPFHVFDIYFTYAQIFL--HTFLLASVWLTVMLAIERYIAICHPLRAISICTVRRARIIIVVIFVFSFYCRVPNFFEQEIKTVTPCPGYPEFRHMVLTKLGQNLTYKISYAWVVDCIICAILPFIALLFLNIRLIIEIRKSTKYLRYHLGTDSNMQNAVSNEQLKITMMLISIIFVFFVCQAPYVITMAYRNIHQYTSRTILRSLTMEIVADATIFMLALKSAINFILYCWFSEKFWNTFKRAF 362
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A0R3VTF0 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS509 PE=4 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.904e-22 Identity = 54/143 (37.76%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 657 LHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIEN---EERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNIN 1076 L F++ Q+W+V F +F ++PF L + L+ +R S RF+RQ+C + N EE ++T +++C+I AFFICQ PF+ Y+A V + + + G S+L+ L L++KSD +FV HCW+ +F AL+RM C+ + Sbjct: 70 LKQFQIVQAWLVHFFIFFVLPFVFLCLASFCLLSAVRMSGRFVRQHCIRGGVEFRNTLREEVRMTVLILCLIGAFFICQSPFVAYSACHKVGILSKPSR-GHSLLRAAITLALALKSDCTFVFHCWLNQRFALALRRMLCSFS 211
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Match: EDO35688 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SKS2]) HSP 1 Score: 48.9062 bits (115), Expect = 1.913e-6 Identity = 21/69 (30.43%), Postives = 37/69 (53.62%), Query Frame = 3 Query: 684 WIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGP 890 W+V+ F+I+PF ++ + + +RR + + AN H + + RKI + C++ AF IC GP Sbjct: 188 WMVNAVTFIILPFAIITIFYVAIFIELRRQLKKSKGMMANSHTLRQKQNRKIAKLAFCIVFAFGICYGP 256
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Match: mlnr (growth hormone secretagogue receptor type 1-like [Source:NCBI gene;Acc:101173159]) HSP 1 Score: 53.5286 bits (127), Expect = 1.889e-7 Identity = 58/236 (24.58%), Postives = 105/236 (44.49%), Query Frame = 3 Query: 390 RIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVG-TVLVKIPSLILL-INYESIVNNDFQ----QHTQ-EIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQE----LSILILSMKSDFSFVLHCWVCDKFGAALKRMF 1064 R Y Y+F + +L T L IERYL +S+P +K + R +F G +L P+L L+ + Y++ N DF +HT I + LW S + + P L+F+ + + +S + C E R+ I++ V++AF IC ++ Y N+ DY+ +ML + S+++ + + + V++ + K+ AA +R+F Sbjct: 113 RFYHYVFEGCTSATILH---ITALSIERYLAISFPLRSKVVVTRRRVQYIIFALWGFALLSAAPTLFLVGVEYDNETNPDFNTGQCKHTSNAISSGQLHIMLWVS-----TTYFFFPMFCLVFLYGSIGCKLWKSKGDLYGPCMLAR---ERSHRQTVKILVVVVLAFIIC---WLPYHIGRNLFAQVDDYET--AMLSQNFNMASMVLCYLSASINPVVYNLMSRKYRAAARRLF 332
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000039899.1 (SMESG000039899.1) HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0 Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 3 Query: 93 MMHLINSSLNKSTDSLIIPTMIKIQNRVIKNYLTPLMXXXXXXXXXXXXXXXHKRNLWISTRIYITAXXXXXXXXXXXXTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNINPERENTINYSMHIASK 1124 MMHLINSSLNKSTDSLIIPTMIKIQNRVIKNYLTPLMSVISITVIVITLLIIHKRNLWISTRIYITALGLVDILGLVILTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNINPERENTINYSMHIASK Sbjct: 1 MMHLINSSLNKSTDSLIIPTMIKIQNRVIKNYLTPLMSVISITVIVITLLIIHKRNLWISTRIYITALGLVDILGLVILTIASLDYFVLNYTINMPIFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNINPERENTINYSMHIASK 344
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000078268.1 (SMESG000078268.1) HSP 1 Score: 135.961 bits (341), Expect = 3.226e-36 Identity = 100/303 (33.00%), Postives = 168/303 (55.45%), Query Frame = 3 Query: 252 KRNLWISTRIYITAXXXXXXXXXXXXTIASLDYFVLNYTI-NMPIFYRIYQYIFILFE---AVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHTQEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKIEN-----EERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSILILSMKSDFSFVLHCWVCDKFGAALKRMFCNINPERENTINYSMHIASK*MY 1133 K+ +W+STR+++T +G+VD+ LV+ I +++ ++ + N + + + IL E ++ +SNW+T +LG ERY+ V YP ++RI HRK+ FV ++ K+P +I++ + +D + I K + +L WI+ LFLIVPF L +N +LIL +RRSSRF+RQ C+N++ +N EE KIT ++I +I+ FF+ QGPF Y L Q + L+ +S ++LS+KS F L+CW C+KF L + C + + ++ + + MY Sbjct: 47 KKGIWLSTRMFMTIMGIVDLFALVLFIIFNIEKPLIELELLNFEMISKWFNVKMILAEFLHGLIFISNWITVLLGFERYIAVCYPLYSRRIDYIHRKIAVAVIFVVIIIFKLPLIIMIYLHRF---HDLRIQRNFIYKLYTHVQL---WIITLFLFLIVPFVCLALINFQLILAVRRSSRFLRQ-CSNQNPNYQNSNSRTEEHKITFVLIGIIVIFFVFQGPFGIYVTL-------QSFNYHSISLRGISSILLSLKSIVHFFLYCWFCEKFRQILYHLLCRSSRQEISSFTLADQSTQQLMY 335
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000061117.1 (SMESG000061117.1) HSP 1 Score: 113.62 bits (283), Expect = 7.068e-28 Identity = 66/212 (31.13%), Postives = 122/212 (57.55%), Query Frame = 3 Query: 414 LFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLILLINYESIVNNDFQQHT-----QEIEKSLHNFELWQSWIVDFSLFLIVPFCVLIFVNARLILTIRRSSRFMRQYCANRHRKI-ENEERKITCIMICVIMAFFICQGPFITYTALSNVHL--FHQDYKNGQSMLQELSILILSMKSDFSFVLHCW 1025 L + +LL SNW+TT+LG+ER + V PFL KRITN HR V +++IP+ IL I + ++ N + + + +K++ + Q+W VDF +F +VPF ++ +++ L+ IR S +F++ +N + + E+KIT + V++ F I QGP YT LS++ + ++ + Q +++ + I S+K++ +F+L+ + Sbjct: 110 LLDIILLSSNWITTLLGLERCVAVRDPFLAKRITNRHRYFSISIVIVTAAILRIPNAILAIWKQEMIFNSLENTSLVNVQSKFQKNILILQNIQNWFVDFCIFFVVPFSLMCWMSYVLLRAIRSSQQFLQYRISNEIKSFNQKNEQKITIFLFVVLLNFIIFQGPLALYTGLSSIGMANYYSIFTQYQFVIRPSCVFIFSIKNEANFILYLY 321
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000061235.1 (SMESG000061235.1) HSP 1 Score: 56.225 bits (134), Expect = 1.763e-8 Identity = 63/260 (24.23%), Postives = 117/260 (45.00%), Query Frame = 3 Query: 381 IFYRIYQYIFILFEAVLLLSNWLTTILGIERYLVVSYPFLTKRITNSHRKLITLFCFVGTVLVKIPSLI---LLINYESIVNNDFQQ----HTQEIEKSLHNFELWQSW-IVDFSLFLIVPFCVLIFVNARLILTIRRS----SRFM---RQYCANRHRKIENEERKITCIMICVIMAFFICQGPFITYTALSNVHLFHQDYKNGQSMLQELSI---LILSMKSDFSFVLHCWVCDKFGA-ALKRMFC---NINPERENT 1094 +F R+ Q+I + + L+S WL ++ IER +++ P K+IT +K I T++ SL+ ++ V F + H E ++ W I+D SL+ ++PFCVLI +N ++ I RS S M Q C+ +K+ + ++ +I V F I P + + L +H +D ++Q L + +++ +F+L+C ++F L + C ++N +NT Sbjct: 141 LFCRLTQFIGV---SSSLVSVWLIVVMTIERVIIIYLPLRAKQIT---QKKIARAVISSTIICS--SLVASHFFFTVDTHVTKQFNKTNLIHFGECTAKPQFHYFYRVWTILDASLYSLIPFCVLISLNVLIVREILRSKNNRSILMNNFNQACSKSIKKVSTDTHHLSVTLIAVSFIFLITTTPLVVHKLL--IHFRDKDEVYHSGIIQFLDVIFEMLMYTNHSINFLLYCATGNRFRQHVLSLLLCRTLSLNRPADNT 390 The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 1
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 4
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30025775 ID=SMED30025775|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1215bpback to top protein sequence of SMED30025775-orf-1 >SMED30025775-orf-1 ID=SMED30025775-orf-1|Name=SMED30025775-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=345bp MMHLINSSLNKSTDSLIIPTMIKIQNRVIKNYLTPLMSVISITVIVITLLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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