Ladybird
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30025723 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 2
Homology
BLAST of Ladybird vs. Ensembl Human
Match: LBX1 (ladybird homeobox 1 [Source:HGNC Symbol;Acc:HGNC:16960]) HSP 1 Score: 108.227 bits (269), Expect = 5.272e-28 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. Ensembl Human
Match: LBX2 (ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15525]) HSP 1 Score: 97.4413 bits (241), Expect = 1.012e-24 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 +KRRKSRT F+ QV ELE+ F QKYL P +RD LAT L L+N QV+TWFQNRRAKLKR+VEE+ D+ Sbjct: 82 GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADV 151
BLAST of Ladybird vs. Ensembl Human
Match: LBX2 (ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15525]) HSP 1 Score: 96.6709 bits (239), Expect = 2.131e-24 Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 2 Query: 296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 +KRRKSRT F+ QV ELE+ F QKYL P +RD LAT L L+N QV+TWFQNRRAKLKR+VEE+ D+ Sbjct: 78 GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADV 147
BLAST of Ladybird vs. Ensembl Human
Match: TLX3 (T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13532]) HSP 1 Score: 73.9442 bits (180), Expect = 3.207e-15 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR + KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 149 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 227
BLAST of Ladybird vs. Ensembl Human
Match: TLX2 (T cell leukemia homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5057]) HSP 1 Score: 71.2478 bits (173), Expect = 3.101e-14 Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 239 CGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 G I H Y NR KR+K RT+FS QV ELE+ F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 140 SGTRRIGHP----YQNRTP-PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAE 218
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-31 (Homeobox protein ceh-31 [Source:UniProtKB/Swiss-Prot;Acc:Q22910]) HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-14 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2 Query: 290 ISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 + KK RK+RT F++ Q++ELE F+KQKYL+ DR +LA + L++ QV TW+QNRR K KR+ Sbjct: 89 VGSKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQA 153
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-30 (Homeobox protein ceh-30 [Source:UniProtKB/Swiss-Prot;Acc:Q22909]) HSP 1 Score: 69.707 bits (169), Expect = 2.147e-14 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 S KK RK+RT F++ Q++ELE F+KQKYL+ DR LA + L++ QV TW+QNRR K KR+ Sbjct: 91 SCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQA 154
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-30 (Homeobox protein ceh-30 [Source:UniProtKB/Swiss-Prot;Acc:Q22909]) HSP 1 Score: 69.707 bits (169), Expect = 2.147e-14 Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 S KK RK+RT F++ Q++ELE F+KQKYL+ DR LA + L++ QV TW+QNRR K KR+ Sbjct: 91 SCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQA 154
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-9 (Homeobox protein ceh-9 [Source:UniProtKB/Swiss-Prot;Acc:P56407]) HSP 1 Score: 67.0106 bits (162), Expect = 4.174e-14 Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 2 Query: 245 LETINHELMSF-------------YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKR 478 L T+N E+ F + KR+K+RTTFS QV ELEK F+ +KYL+ DR +LA L ++ QV WFQNRR K K+ Sbjct: 37 LPTVNGEIDEFGRCKSSLDQAKESPIEKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKK 127
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-28 (C. Elegans Homeobox; NK-2 family homeodomain protein CEH-28 [Source:UniProtKB/TrEMBL;Acc:G5EE18]) HSP 1 Score: 64.3142 bits (155), Expect = 1.123e-12 Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 2 Query: 293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKR 478 S +++RK R F+ QV ELE+ F+KQ+Y+T +R++LA L L+ QV WFQNRR K KR Sbjct: 100 SQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKR 161
BLAST of Ladybird vs. Ensembl Fly
Match: lbe (gene:FBgn0011278 transcript:FBtr0084091) HSP 1 Score: 106.301 bits (264), Expect = 1.288e-26 Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 + ++NR KK+RKSRT F+N Q+ ELEK F QKYL+P DRD++A L LSN QVITWFQNRRAK KR++EEL +D Sbjct: 341 LDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDF 419
BLAST of Ladybird vs. Ensembl Fly
Match: lbl (gene:FBgn0008651 transcript:FBtr0084092) HSP 1 Score: 103.219 bits (256), Expect = 7.145e-26 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 ++ + R + KK+RKSRT F+N Q+ ELEK F QKYL+P DRD++A L LSN QVITWFQNRRAKLKR++EEL +D+ Sbjct: 239 LNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDV 317
BLAST of Ladybird vs. Ensembl Fly
Match: lbl (gene:FBgn0008651 transcript:FBtr0332438) HSP 1 Score: 103.605 bits (257), Expect = 8.655e-26 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 ++ + R + KK+RKSRT F+N Q+ ELEK F QKYL+P DRD++A L LSN QVITWFQNRRAKLKR++EEL +D+ Sbjct: 239 LNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDV 317
BLAST of Ladybird vs. Ensembl Fly
Match: B-H2 (gene:FBgn0004854 transcript:FBtr0074429) HSP 1 Score: 75.485 bits (184), Expect = 1.242e-15 Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 2 Query: 299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKRE 481 KK+RK+RT F++ Q++ LEK F++QKYL+ DR +LA +L LS+ QV TW+QNRR K KR+ Sbjct: 378 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQ 438
BLAST of Ladybird vs. Ensembl Fly
Match: C15 (gene:FBgn0004863 transcript:FBtr0084111) HSP 1 Score: 74.3294 bits (181), Expect = 1.543e-15 Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 278 YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 Y NR KR+K RT+F+ QV ELEK F KQKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 209 YQNRTP-PKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAE 278
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx1a (ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40]) HSP 1 Score: 105.531 bits (262), Expect = 2.290e-27 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTLFGQRNTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx2 (ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]) HSP 1 Score: 104.76 bits (260), Expect = 3.636e-27 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 257 NHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 E ++ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 110 GREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 192
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx2 (ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2]) HSP 1 Score: 104.76 bits (260), Expect = 3.636e-27 Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 257 NHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 E ++ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 110 GREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 192
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx1b (ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27]) HSP 1 Score: 103.99 bits (258), Expect = 9.238e-27 Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 + + R S KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 109 LKLFGQRDSPKKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 187
BLAST of Ladybird vs. Ensembl Zebrafish
Match: CABZ01067175.1 (T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]) HSP 1 Score: 74.3294 bits (181), Expect = 1.043e-15 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR + KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 112 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 190
BLAST of Ladybird vs. Ensembl Xenopus
Match: lbx1 (ladybird homeobox 1 [Source:NCBI gene;Acc:780014]) HSP 1 Score: 106.686 bits (265), Expect = 1.365e-27 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. Ensembl Xenopus
Match: soga1 (suppressor of glucose, autophagy associated 1 [Source:Xenbase;Acc:XB-GENE-6049995]) HSP 1 Score: 76.6406 bits (187), Expect = 1.079e-16 Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 2 Query: 239 CGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 C I H Y NR + KR+K RT+FS Q+ ELEK F +QKYL +R LA L +S++QV TWFQNRR K +R+ E Sbjct: 89 CATRRIGHP----YQNR-TPPKRKKPRTSFSRLQICELEKRFHRQKYLASAERASLAKALRMSDSQVKTWFQNRRTKWRRQTAE 167
BLAST of Ladybird vs. Ensembl Xenopus
Match: jup (junction plakoglobin [Source:Xenbase;Acc:XB-GENE-489397]) HSP 1 Score: 74.3294 bits (181), Expect = 2.427e-15 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR + KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 150 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 228
BLAST of Ladybird vs. Ensembl Xenopus
Match: ENSXETT00000011915.1 (T cell leukemia homeobox 1 [Source:NCBI gene;Acc:100494864]) HSP 1 Score: 72.0182 bits (175), Expect = 1.880e-14 Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR KK+ K RT+F+ Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 165 TVTRRIGHPYQNRTPPKKK-KPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 243
BLAST of Ladybird vs. Ensembl Xenopus
Match: BARX1 (BARX homeobox 1 [Source:NCBI gene;Acc:100491751]) HSP 1 Score: 70.4774 bits (171), Expect = 2.715e-14 Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 2 Query: 299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELH 496 KK R+SRT F+ Q+ LEK F+KQKYL+ DR LA L LS QV TW+QNRR K K+ V + + Sbjct: 138 KKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVSDFY 203
BLAST of Ladybird vs. Ensembl Mouse
Match: Lbx1 (ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867]) HSP 1 Score: 108.227 bits (269), Expect = 3.691e-28 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. Ensembl Mouse
Match: Lbx2 (ladybird homeobox 2 [Source:MGI Symbol;Acc:MGI:1342288]) HSP 1 Score: 94.7449 bits (234), Expect = 7.850e-24 Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 2 Query: 299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 ++RRKSRT F+ QV ELE+ F QKYL P +RD LA L L+N QV+TWFQNRRAKLKR+VEE+ D+ Sbjct: 82 RRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADV 150
BLAST of Ladybird vs. Ensembl Mouse
Match: Tlx3 (T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209]) HSP 1 Score: 73.9442 bits (180), Expect = 2.224e-15 Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR + KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 149 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 227
BLAST of Ladybird vs. Ensembl Mouse
Match: Tlx2 (T cell leukemia, homeobox 2 [Source:MGI Symbol;Acc:MGI:1350935]) HSP 1 Score: 71.633 bits (174), Expect = 1.205e-14 Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 2 Query: 239 CGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 G I H Y NR KR+K RT+FS QV ELE+ F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 140 SGTRRIGHP----YQNRTP-PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAE 218
BLAST of Ladybird vs. Ensembl Mouse
Match: Tlx1 (T cell leukemia, homeobox 1 [Source:MGI Symbol;Acc:MGI:98769]) HSP 1 Score: 71.2478 bits (173), Expect = 2.869e-14 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 2 Query: 278 YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 Y NR KK+ K RT+F+ Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 196 YQNRTPPKKK-KPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 265
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|P52954|LBX1_HUMAN (Transcription factor LBX1 OS=Homo sapiens OX=9606 GN=LBX1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.532e-27 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|P52955|LBX1_MOUSE (Transcription factor LBX1 OS=Mus musculus OX=10090 GN=Lbx1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 2.582e-27 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|Q1XID0|LBX1_RAT (Transcription factor LBX1 OS=Rattus norvegicus OX=10116 GN=Lbx1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 2.737e-27 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|Q26604|SMOX5_SCHMA (Homeobox protein SMOX-5 OS=Schistosoma mansoni OX=6183 GN=SMOX-5 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.642e-27 Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 2 Query: 197 MTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 MT S +Q + E + FY +KRRK+RTTFSN Q+ ELE +F +Q+YLTP DRD++A L L+N QVITWFQNRRAKLKRE EEL RD+ Sbjct: 1 MTTSTMQQLKHDGDFSDELNETSTIQFYNKVSQQRKRRKTRTTFSNCQLNELENNFNRQRYLTPTDRDRIAKHLGLTNTQVITWFQNRRAKLKREAEELERDV 103
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|Q2PYN8|LBX1_XENLA (Transcription factor LBX1 OS=Xenopus laevis OX=8355 GN=lbx1 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 6.099e-27 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 115 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 193
BLAST of Ladybird vs. TrEMBL
Match: A0A291FGJ4 (Ladybird (Fragment) OS=Schmidtea mediterranea OX=79327 GN=lbx PE=2 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 1.940e-100 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 2 Query: 2 MKRSSFHIDELLIEKLXXXXXXXXXXXXXXXXXXXLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL Sbjct: 1 MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 168
BLAST of Ladybird vs. TrEMBL
Match: A0A564ZCM5 (Homeobox domain-containing protein (Fragment) OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS14540 PE=4 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.723e-29 Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 176 ALNSLINMTRS---QIQNMNESFR--------CGLETINHELMS---FYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 ALNSLI MTRS Q+ N NE+ + G+ +++ EL S +NR KRRK+RTTF++FQ+ ELE +F KQKYLTP DRD++A+EL LS+ QVITWFQNRRAK KRE EL RD+ Sbjct: 41 ALNSLIEMTRSNSYQLGNSNETSKSKSYQKQATGM-SVSEELNSRSGGMSNRA--PKRRKTRTTFTSFQLAELEVYFSKQKYLTPTDRDQIASELGLSSTQVITWFQNRRAKKKRECAELERDV 161
BLAST of Ladybird vs. TrEMBL
Match: A0A183ADJ2 (Homeobox domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS5027 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 7.273e-29 Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 107 LLRNIEQSSRM---EAAGE---KYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 + R +E+SS+ E G+ + +++AL++LI+MT S +Q +N + + + T KRRK+RTTFSN Q+ ELE +F +QKYLTP DRD++A L LSN QVITWFQNRRAKLKRE EEL RD+ Sbjct: 228 MCRGLEESSQGSGDECTGKGSRSPYGSNSALDALIHMTTSSMQRLNRKVDKPISPTDRLDLCTLTRGSQMTKRRKTRTTFSNSQLSELETNFNRQKYLTPTDRDRIAKHLGLSNTQVITWFQNRRAKLKREAEELERDI 366
BLAST of Ladybird vs. TrEMBL
Match: A0A158QD83 (Homeobox domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS2561 PE=4 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.942e-28 Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 2 Query: 176 ALNSLINMTRS---QIQNMNESFR--------CGLETINHELMS---FYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 ALNSLI MTRS Q+ N NE+ + G+ +++ EL S +NR KRRK+RTTF++FQ+ ELE +F KQKYLTP DRD++A+EL LS+ QVITWFQNRRAK KRE EL RD+ Sbjct: 159 ALNSLIEMTRSNSYQLGNSNETSKSKSYQKQATGM-SVSEELNSRSGGMSNRA--PKRRKTRTTFTSFQLAELEVYFSKQKYLTPTDRDQIASELGLSSTQVITWFQNRRAKKKRECAELERDV 279
BLAST of Ladybird vs. TrEMBL
Match: A0A0A9WFM8 (Transcription factor LBX1 (Fragment) OS=Lygus hesperus OX=30085 GN=lbx1 PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.093e-27 Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 2 Query: 167 NHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 + + L++L MT + +N + G M+ ++NR KK+RKSRT F+N Q+ ELEK F QKYL+P DRD++A +L LSN QVITWFQNRRAKLKR++EEL +D+ Sbjct: 4 DTSPLDALFQMTSKTFEELNGESQEG----QGSHMNMFSNRQQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAAQLGLSNAQVITWFQNRRAKLKRDMEELKKDV 112
BLAST of Ladybird vs. Ensembl Cavefish
Match: ENSAMXT00000051218.1 (ladybird homeobox 1 [Source:NCBI gene;Acc:103034680]) HSP 1 Score: 106.301 bits (264), Expect = 8.931e-28 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 107 MTLFGQRNTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 185
BLAST of Ladybird vs. Ensembl Cavefish
Match: lbx2 (transcription factor LBX1 [Source:NCBI gene;Acc:103021396]) HSP 1 Score: 105.531 bits (262), Expect = 1.682e-27 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 2 Query: 257 NHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 E M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 109 GREHMNAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. Ensembl Cavefish
Match: ENSAMXT00000000488.2 (transcription factor LBX1-like [Source:NCBI gene;Acc:103028441]) HSP 1 Score: 105.145 bits (261), Expect = 3.817e-27 Identity = 59/168 (35.12%), Postives = 90/168 (53.57%), Query Frame = 2 Query: 2 MKRSSFHIDELLIEKLXXXXXXXXXXXXXXXXXXXLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M RSS H+ + S S+ + + R + S ++ +AL++L +T + + M + ++ RI KKRRK+RT F+N Q+ ELEK F Q+YL+P DRD++A +L L+N QVITWFQNRRAKLKR+++E+ D+ Sbjct: 19 MPRSSDHVPPKPLTPFSIADILSKPSIKPSIPRVGTCRGVSWSVKVRGRSSGTPQEPSALSALQELTNNTFRAMELVTTAAPPAGGKDELALVAQRIHPKKRRKARTAFTNHQLCELEKRFLFQRYLSPADRDRIAQQLGLTNAQVITWFQNRRAKLKRDLDEMRADV 186
BLAST of Ladybird vs. Ensembl Cavefish
Match: tlx3b (T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1]) HSP 1 Score: 73.559 bits (179), Expect = 1.945e-15 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 140 TVARRIGHPYQNRTP-PKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWRRQTAE 218
BLAST of Ladybird vs. Ensembl Cavefish
Match: ENSAMXT00000055288.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000111.1:341656:348959:-1 gene:ENSAMXG00000038858.1 transcript:ENSAMXT00000055288.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 72.4034 bits (176), Expect = 4.292e-15 Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 2 Query: 278 YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 Y NR + KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 135 YQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 204
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: barhl2 (BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]) HSP 1 Score: 72.4034 bits (176), Expect = 6.471e-17 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 KK RK+RT FS+ Q+ +LE+ F++QKYL+ DR +LA+ L+LS+ QV TW+QNRR K KR+ Sbjct: 3 KKPRKARTAFSDHQLTQLERSFERQKYLSVQDRMELASSLSLSDTQVKTWYQNRRTKWKRQT 64
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: barhl2 (BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153]) HSP 1 Score: 72.4034 bits (176), Expect = 9.919e-17 Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 2 Query: 299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 KK RK+RT FS+ Q+ +LE+ F++QKYL+ DR +LA+ L+LS+ QV TW+QNRR K KR+ Sbjct: 3 KKPRKARTAFSDHQLTQLERSFERQKYLSVQDRMELASSLSLSDTQVKTWYQNRRTKWKRQT 64
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: hhex (pep scaffold:Pmarinus_7.0:GL476649:273574:289580:-1 gene:ENSPMAG00000009445.1 transcript:ENSPMAT00000010429.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hhex) HSP 1 Score: 70.0922 bits (170), Expect = 5.161e-15 Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2 Query: 266 LMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRD 502 L + + R +HK R+ + FS+ Q ELE+ F++QKYL+P +R LA L LS QV TWFQNRRAK +R +EL D Sbjct: 131 LWAPFLPRPAHK-RKGGQVRFSSEQTVELERKFERQKYLSPGERKGLAKLLQLSERQVKTWFQNRRAKWRRLKQELPSD 208
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: tlx1 (T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]) HSP 1 Score: 69.3218 bits (168), Expect = 1.747e-14 Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLK 475 T+ H Y NR KR+K RT+F+ Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K + Sbjct: 217 TVGHP----YQNRTP-PKRKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR 286
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001480.1 (pep scaffold:Pmarinus_7.0:GL487501:66:2428:-1 gene:ENSPMAG00000001338.1 transcript:ENSPMAT00000001480.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 63.929 bits (154), Expect = 8.497e-14 Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 2 Query: 302 KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAK 469 +RRK+RT F++ Q+ LE+ F +Q+YL+ +R LAT L LS QV TWFQNRR K Sbjct: 5 RRRKARTVFTDSQLSGLERRFVRQRYLSTPERVDLATALGLSETQVKTWFQNRRMK 60
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO42702 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0N4]) HSP 1 Score: 96.6709 bits (239), Expect = 3.739e-26 Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2 Query: 287 RISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 R+S +KRRK RT F+N Q+ ELE+ F QKYL+P DRD +A L L Q+ITWFQNRRAK++R+VEEL D+ Sbjct: 13 RLSQRKRRKPRTCFTNRQIIELERRFMYQKYLSPSDRDDIAMALGLPGAQIITWFQNRRAKMRRDVEELKSDV 85
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO34127 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ94]) HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-16 Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 2 Query: 305 RRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 ++K RT F+ Q+ ELEK FQ QKYL +R +LA L L++ QV TWFQNRR KLKR+ +E Sbjct: 1 KKKPRTAFTESQISELEKRFQSQKYLGSKERSELAGTLGLTDTQVKTWFQNRRMKLKRQRQE 62
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO49466 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG38]) HSP 1 Score: 67.781 bits (164), Expect = 1.983e-15 Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 317 RTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 R FSN Q + LEK FQ QKYLT DR +LA+ L LS+NQV WFQNRR K +++ E Sbjct: 1 RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLSDNQVKVWFQNRRMKWRQDARE 58
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO46621 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPR9]) HSP 1 Score: 73.559 bits (179), Expect = 2.697e-15 Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 2 Query: 227 ESFRCGLETINHELMSFYTNRISHKKRRK------SRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 + FR G + + M F T+ +KR++ +RT F+N Q+RELE FQK KYLT R +LA L LS+ Q+ WFQNRR KLKR++ Sbjct: 1012 DMFRTGRKGLRGRDM-FSTDVYRRRKRKRDPSKKRTRTAFTNTQIRELEAEFQKNKYLTITRRAELANSLELSDTQIKIWFQNRRTKLKRKL 1102
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO42443 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1E2]) HSP 1 Score: 67.0106 bits (162), Expect = 3.839e-15 Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 2 Query: 317 RTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 R FSN Q + LEK FQ QKYLT DR +LA+ L L++NQV WFQNRR K +++ E Sbjct: 1 RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLTDNQVKVWFQNRRMKWRQDARE 58
BLAST of Ladybird vs. Ensembl Medaka
Match: lbx1b (ladybird homeobox 1 [Source:NCBI gene;Acc:101160879]) HSP 1 Score: 107.457 bits (267), Expect = 4.135e-28 Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 M+ + R + KKRRKSRT F+N Q+ ELEK F QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+ D+ Sbjct: 113 MTLFGQRTTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191
BLAST of Ladybird vs. Ensembl Medaka
Match: ENSORLT00000004940.2 (T cell leukemia homeobox 3 [Source:NCBI gene;Acc:101161249]) HSP 1 Score: 75.485 bits (184), Expect = 4.498e-16 Identity = 47/126 (37.30%), Postives = 64/126 (50.79%), Query Frame = 2 Query: 137 MEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSF-YTNRISHK-------KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 + A G + NA+ + I N R + I+ L+ F T RI H KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 108 VTAPGPPAPV-QNAVPGFGGLCFPWIGN-----RFAKDRISAALVPFAVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 227
BLAST of Ladybird vs. Ensembl Medaka
Match: tlx1 (T cell leukemia homeobox 1 [Source:NCBI gene;Acc:101163994]) HSP 1 Score: 73.9442 bits (180), Expect = 1.824e-15 Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2 Query: 251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 T+ + Y NR KR+K RT+FS Q+ ELEK F +QKYL +R LA L +++ QV TWFQNRR K +R+ E Sbjct: 149 TVTRRIGHPYQNRTP-PKRKKPRTSFSRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 227
BLAST of Ladybird vs. Ensembl Medaka
Match: barhl1a (BarH like homeobox 1 [Source:NCBI gene;Acc:101158364]) HSP 1 Score: 72.7886 bits (177), Expect = 2.936e-15 Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 2 Query: 272 SFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKRE 481 SF + KK RK+RT FS+ Q+ LE+ FQKQKYL+ DR +LA L LS+ QV TW+QNRR K KR+ Sbjct: 129 SFDPVGVRLKKPRKARTAFSDQQLSRLERSFQKQKYLSVQDRIELAASLQLSDTQVKTWYQNRRTKWKRQ 198
BLAST of Ladybird vs. Ensembl Medaka
Match: bsx (brain specific homeobox [Source:NCBI gene;Acc:101161363]) HSP 1 Score: 69.3218 bits (168), Expect = 3.602e-14 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 2 Query: 296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 H +RRK+RT FS+ Q+ LEK F+ Q+YL+ +R +LAT L+LS QV TWFQNRR K K+++ Sbjct: 98 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQL 160
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000063219.1 (SMESG000063219.1) HSP 1 Score: 297.36 bits (760), Expect = 7.375e-104 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 2 Query: 2 MKRSSFHIDELLIEKLXXXXXXXXXXXXXXXXXXXLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505 MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL Sbjct: 1 MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 168
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000074896.1 (SMESG000074896.1) HSP 1 Score: 72.7886 bits (177), Expect = 2.964e-15 Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 2 Query: 293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 S KK RK+RT F++ Q+ ELEK+F++QKYL+ DR +LA +L L++ QV TW+QNRR K KR+ Sbjct: 85 SGKKPRKARTAFTDHQLNELEKNFEQQKYLSVQDRMELAAKLRLTDTQVKTWYQNRRTKWKRQT 148
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000030375.1 (SMESG000030375.1) HSP 1 Score: 71.633 bits (174), Expect = 7.835e-15 Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 2 Query: 284 NRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484 +R KK RK+RT F++ Q+ ELE++F +QKYL+ DR +LA L LS+ QV TW+QNRR K KR+ Sbjct: 128 DRSKSKKPRKARTAFTDLQLNELERNFDRQKYLSVQDRMELANRLRLSDTQVKTWYQNRRTKWKRQT 194
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000017206.1 (SMESG000017206.1) HSP 1 Score: 68.1662 bits (165), Expect = 4.946e-14 Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 2 Query: 278 YTNRISHK-------KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490 Y R+ H KR+K RT+F+ Q+ ELE+ F +QKYL +R LA +L ++++QV TWFQNRR K +R+ E Sbjct: 62 YPRRVGHPYQNRTPPKRKKPRTSFNRQQIMELERRFHRQKYLASSERCDLAKDLDMTDSQVKTWFQNRRTKWRRQTSE 139
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000033607.1 (SMESG000033607.1) HSP 1 Score: 68.1662 bits (165), Expect = 2.110e-13 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 2 Query: 296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKR 478 H +RRK+RT FS+ Q+ LEK F+ Q+YL+ +R +LA +L LS +QV TWFQNRR K K+ Sbjct: 197 HSRRRKARTVFSDQQLNGLEKRFESQRYLSTPERIELANQLNLSESQVKTWFQNRRMKYKK 257 The following BLAST results are available for this feature:
BLAST of Ladybird vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Ladybird vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Ladybird vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ladybird vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Ladybird vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Ladybird vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Ladybird vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Ladybird vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30025723 ID=SMED30025723|Name=Ladybird|organism=Schmidtea mediterranea sexual|type=transcript|length=632bpback to top protein sequence of SMED30025723-orf-1 >SMED30025723-orf-1 ID=SMED30025723-orf-1|Name=SMED30025723-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=180bp MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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