Ladybird

Overview
NameLadybird
Smed IDSMED30025723
Length (bp)632
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Ladybird (SMED30025723) t-SNE clustered cells

Violin plots show distribution of expression levels for Ladybird (SMED30025723) in cells (dots) of each of the 12 neoblast clusters.

 

back to top


 

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ladybird (SMED30025723) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ladybird (SMED30025723) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

back to top


 

Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

back to top
Anatomical Expression

PAGE et. al., 2020




SMED30025723

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
muscle cellSMED30025723h1SMcG0011535 dd_Smed_v4_31435_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
body wall musculatureSMED30025723h1SMcG0011535 dd_Smed_v4_31435_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Ladybird vs. Ensembl Human
Match: LBX1 (ladybird homeobox 1 [Source:HGNC Symbol;Acc:HGNC:16960])

HSP 1 Score: 108.227 bits (269), Expect = 5.272e-28
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. Ensembl Human
Match: LBX2 (ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15525])

HSP 1 Score: 97.4413 bits (241), Expect = 1.012e-24
Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
             +KRRKSRT F+  QV ELE+ F  QKYL P +RD LAT L L+N QV+TWFQNRRAKLKR+VEE+  D+
Sbjct:   82 GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADV 151          
BLAST of Ladybird vs. Ensembl Human
Match: LBX2 (ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:15525])

HSP 1 Score: 96.6709 bits (239), Expect = 2.131e-24
Identity = 45/70 (64.29%), Postives = 54/70 (77.14%), Query Frame = 2
Query:  296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
             +KRRKSRT F+  QV ELE+ F  QKYL P +RD LAT L L+N QV+TWFQNRRAKLKR+VEE+  D+
Sbjct:   78 GRKRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLATRLGLANAQVVTWFQNRRAKLKRDVEEMRADV 147          
BLAST of Ladybird vs. Ensembl Human
Match: TLX3 (T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc:HGNC:13532])

HSP 1 Score: 73.9442 bits (180), Expect = 3.207e-15
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR +  KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  149 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 227          
BLAST of Ladybird vs. Ensembl Human
Match: TLX2 (T cell leukemia homeobox 2 [Source:HGNC Symbol;Acc:HGNC:5057])

HSP 1 Score: 71.2478 bits (173), Expect = 3.101e-14
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 2
Query:  239 CGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
             G   I H     Y NR    KR+K RT+FS  QV ELE+ F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  140 SGTRRIGHP----YQNRTP-PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAE 218          
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-31 (Homeobox protein ceh-31 [Source:UniProtKB/Swiss-Prot;Acc:Q22910])

HSP 1 Score: 70.4774 bits (171), Expect = 1.725e-14
Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 2
Query:  290 ISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            +  KK RK+RT F++ Q++ELE  F+KQKYL+  DR +LA  + L++ QV TW+QNRR K KR+ 
Sbjct:   89 VGSKKARKARTIFTDKQLQELENTFEKQKYLSVQDRMELAHRMGLTDTQVKTWYQNRRTKWKRQA 153          
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-30 (Homeobox protein ceh-30 [Source:UniProtKB/Swiss-Prot;Acc:Q22909])

HSP 1 Score: 69.707 bits (169), Expect = 2.147e-14
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 2
Query:  293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            S KK RK+RT F++ Q++ELE  F+KQKYL+  DR  LA  + L++ QV TW+QNRR K KR+ 
Sbjct:   91 SCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQA 154          
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-30 (Homeobox protein ceh-30 [Source:UniProtKB/Swiss-Prot;Acc:Q22909])

HSP 1 Score: 69.707 bits (169), Expect = 2.147e-14
Identity = 34/64 (53.12%), Postives = 46/64 (71.88%), Query Frame = 2
Query:  293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            S KK RK+RT F++ Q++ELE  F+KQKYL+  DR  LA  + L++ QV TW+QNRR K KR+ 
Sbjct:   91 SCKKSRKARTIFTDKQLQELENTFEKQKYLSVQDRMDLAHRMGLTDTQVKTWYQNRRTKWKRQA 154          
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-9 (Homeobox protein ceh-9 [Source:UniProtKB/Swiss-Prot;Acc:P56407])

HSP 1 Score: 67.0106 bits (162), Expect = 4.174e-14
Identity = 38/91 (41.76%), Postives = 50/91 (54.95%), Query Frame = 2
Query:  245 LETINHELMSF-------------YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKR 478
            L T+N E+  F                +    KR+K+RTTFS  QV ELEK F+ +KYL+  DR +LA  L ++  QV  WFQNRR K K+
Sbjct:   37 LPTVNGEIDEFGRCKSSLDQAKESPIEKCQKTKRKKARTTFSGKQVFELEKQFEAKKYLSSSDRSELAKRLDVTETQVKIWFQNRRTKWKK 127          
BLAST of Ladybird vs. Ensembl Celegans
Match: ceh-28 (C. Elegans Homeobox; NK-2 family homeodomain protein CEH-28 [Source:UniProtKB/TrEMBL;Acc:G5EE18])

HSP 1 Score: 64.3142 bits (155), Expect = 1.123e-12
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 2
Query:  293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKR 478
            S +++RK R  F+  QV ELE+ F+KQ+Y+T  +R++LA  L L+  QV  WFQNRR K KR
Sbjct:  100 SQQQKRKPRVLFTQHQVNELEERFKKQRYVTATEREELAQCLGLTATQVKIWFQNRRYKCKR 161          
BLAST of Ladybird vs. Ensembl Fly
Match: lbe (gene:FBgn0011278 transcript:FBtr0084091)

HSP 1 Score: 106.301 bits (264), Expect = 1.288e-26
Identity = 48/79 (60.76%), Postives = 60/79 (75.95%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            +  ++NR   KK+RKSRT F+N Q+ ELEK F  QKYL+P DRD++A  L LSN QVITWFQNRRAK KR++EEL +D 
Sbjct:  341 LDIFSNRPQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAASLGLSNAQVITWFQNRRAKQKRDIEELKKDF 419          
BLAST of Ladybird vs. Ensembl Fly
Match: lbl (gene:FBgn0008651 transcript:FBtr0084092)

HSP 1 Score: 103.219 bits (256), Expect = 7.145e-26
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            ++ +  R + KK+RKSRT F+N Q+ ELEK F  QKYL+P DRD++A  L LSN QVITWFQNRRAKLKR++EEL +D+
Sbjct:  239 LNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDV 317          
BLAST of Ladybird vs. Ensembl Fly
Match: lbl (gene:FBgn0008651 transcript:FBtr0332438)

HSP 1 Score: 103.605 bits (257), Expect = 8.655e-26
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            ++ +  R + KK+RKSRT F+N Q+ ELEK F  QKYL+P DRD++A  L LSN QVITWFQNRRAKLKR++EEL +D+
Sbjct:  239 LNIFATRSNPKKKRKSRTAFTNQQIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKRDMEELKKDV 317          
BLAST of Ladybird vs. Ensembl Fly
Match: B-H2 (gene:FBgn0004854 transcript:FBtr0074429)

HSP 1 Score: 75.485 bits (184), Expect = 1.242e-15
Identity = 34/61 (55.74%), Postives = 48/61 (78.69%), Query Frame = 2
Query:  299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKRE 481
            KK+RK+RT F++ Q++ LEK F++QKYL+  DR +LA +L LS+ QV TW+QNRR K KR+
Sbjct:  378 KKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQ 438          
BLAST of Ladybird vs. Ensembl Fly
Match: C15 (gene:FBgn0004863 transcript:FBtr0084111)

HSP 1 Score: 74.3294 bits (181), Expect = 1.543e-15
Identity = 37/71 (52.11%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  278 YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            Y NR    KR+K RT+F+  QV ELEK F KQKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  209 YQNRTP-PKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRRQTAE 278          
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx1a (ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040724-40])

HSP 1 Score: 105.531 bits (262), Expect = 2.290e-27
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTLFGQRNTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx2 (ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2])

HSP 1 Score: 104.76 bits (260), Expect = 3.636e-27
Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 2
Query:  257 NHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
              E ++ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  110 GREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 192          
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx2 (ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-001206-2])

HSP 1 Score: 104.76 bits (260), Expect = 3.636e-27
Identity = 48/83 (57.83%), Postives = 63/83 (75.90%), Query Frame = 2
Query:  257 NHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
              E ++ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  110 GREHINAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 192          
BLAST of Ladybird vs. Ensembl Zebrafish
Match: lbx1b (ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050309-27])

HSP 1 Score: 103.99 bits (258), Expect = 9.238e-27
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            +  +  R S KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  109 LKLFGQRDSPKKRRKSRTAFTNHQLYELEKRFLHQKYLSPADRDQIAHQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 187          
BLAST of Ladybird vs. Ensembl Zebrafish
Match: CABZ01067175.1 (T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066])

HSP 1 Score: 74.3294 bits (181), Expect = 1.043e-15
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR +  KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  112 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 190          
BLAST of Ladybird vs. Ensembl Xenopus
Match: lbx1 (ladybird homeobox 1 [Source:NCBI gene;Acc:780014])

HSP 1 Score: 106.686 bits (265), Expect = 1.365e-27
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. Ensembl Xenopus
Match: soga1 (suppressor of glucose, autophagy associated 1 [Source:Xenbase;Acc:XB-GENE-6049995])

HSP 1 Score: 76.6406 bits (187), Expect = 1.079e-16
Identity = 40/84 (47.62%), Postives = 51/84 (60.71%), Query Frame = 2
Query:  239 CGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            C    I H     Y NR +  KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +S++QV TWFQNRR K +R+  E
Sbjct:   89 CATRRIGHP----YQNR-TPPKRKKPRTSFSRLQICELEKRFHRQKYLASAERASLAKALRMSDSQVKTWFQNRRTKWRRQTAE 167          
BLAST of Ladybird vs. Ensembl Xenopus
Match: jup (junction plakoglobin [Source:Xenbase;Acc:XB-GENE-489397])

HSP 1 Score: 74.3294 bits (181), Expect = 2.427e-15
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR +  KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  150 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 228          
BLAST of Ladybird vs. Ensembl Xenopus
Match: ENSXETT00000011915.1 (T cell leukemia homeobox 1 [Source:NCBI gene;Acc:100494864])

HSP 1 Score: 72.0182 bits (175), Expect = 1.880e-14
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR   KK+ K RT+F+  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  165 TVTRRIGHPYQNRTPPKKK-KPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 243          
BLAST of Ladybird vs. Ensembl Xenopus
Match: BARX1 (BARX homeobox 1 [Source:NCBI gene;Acc:100491751])

HSP 1 Score: 70.4774 bits (171), Expect = 2.715e-14
Identity = 35/66 (53.03%), Postives = 44/66 (66.67%), Query Frame = 2
Query:  299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELH 496
            KK R+SRT F+  Q+  LEK F+KQKYL+  DR  LA  L LS  QV TW+QNRR K K+ V + +
Sbjct:  138 KKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVSDFY 203          
BLAST of Ladybird vs. Ensembl Mouse
Match: Lbx1 (ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104867])

HSP 1 Score: 108.227 bits (269), Expect = 3.691e-28
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. Ensembl Mouse
Match: Lbx2 (ladybird homeobox 2 [Source:MGI Symbol;Acc:MGI:1342288])

HSP 1 Score: 94.7449 bits (234), Expect = 7.850e-24
Identity = 43/69 (62.32%), Postives = 53/69 (76.81%), Query Frame = 2
Query:  299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            ++RRKSRT F+  QV ELE+ F  QKYL P +RD LA  L L+N QV+TWFQNRRAKLKR+VEE+  D+
Sbjct:   82 RRRRKSRTAFTAQQVLELERRFVFQKYLAPSERDGLAARLGLANAQVVTWFQNRRAKLKRDVEEMRADV 150          
BLAST of Ladybird vs. Ensembl Mouse
Match: Tlx3 (T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc:MGI:1351209])

HSP 1 Score: 73.9442 bits (180), Expect = 2.224e-15
Identity = 37/80 (46.25%), Postives = 50/80 (62.50%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR +  KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  149 TVTRRIGHPYQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 227          
BLAST of Ladybird vs. Ensembl Mouse
Match: Tlx2 (T cell leukemia, homeobox 2 [Source:MGI Symbol;Acc:MGI:1350935])

HSP 1 Score: 71.633 bits (174), Expect = 1.205e-14
Identity = 39/84 (46.43%), Postives = 49/84 (58.33%), Query Frame = 2
Query:  239 CGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
             G   I H     Y NR    KR+K RT+FS  QV ELE+ F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  140 SGTRRIGHP----YQNRTP-PKRKKPRTSFSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQTAE 218          
BLAST of Ladybird vs. Ensembl Mouse
Match: Tlx1 (T cell leukemia, homeobox 1 [Source:MGI Symbol;Acc:MGI:98769])

HSP 1 Score: 71.2478 bits (173), Expect = 2.869e-14
Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 2
Query:  278 YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            Y NR   KK+ K RT+F+  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  196 YQNRTPPKKK-KPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 265          
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|P52954|LBX1_HUMAN (Transcription factor LBX1 OS=Homo sapiens OX=9606 GN=LBX1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.532e-27
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|P52955|LBX1_MOUSE (Transcription factor LBX1 OS=Mus musculus OX=10090 GN=Lbx1 PE=1 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 2.582e-27
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|Q1XID0|LBX1_RAT (Transcription factor LBX1 OS=Rattus norvegicus OX=10116 GN=Lbx1 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 2.737e-27
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|Q26604|SMOX5_SCHMA (Homeobox protein SMOX-5 OS=Schistosoma mansoni OX=6183 GN=SMOX-5 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 3.642e-27
Identity = 55/103 (53.40%), Postives = 68/103 (66.02%), Query Frame = 2
Query:  197 MTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            MT S +Q +        E      + FY      +KRRK+RTTFSN Q+ ELE +F +Q+YLTP DRD++A  L L+N QVITWFQNRRAKLKRE EEL RD+
Sbjct:    1 MTTSTMQQLKHDGDFSDELNETSTIQFYNKVSQQRKRRKTRTTFSNCQLNELENNFNRQRYLTPTDRDRIAKHLGLTNTQVITWFQNRRAKLKREAEELERDV 103          
BLAST of Ladybird vs. UniProt/SwissProt
Match: sp|Q2PYN8|LBX1_XENLA (Transcription factor LBX1 OS=Xenopus laevis OX=8355 GN=lbx1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 6.099e-27
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  115 MTIFGQRQTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 193          
BLAST of Ladybird vs. TrEMBL
Match: A0A291FGJ4 (Ladybird (Fragment) OS=Schmidtea mediterranea OX=79327 GN=lbx PE=2 SV=1)

HSP 1 Score: 297.36 bits (760), Expect = 1.940e-100
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 2
Query:    2 MKRSSFHIDELLIEKLXXXXXXXXXXXXXXXXXXXLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL
Sbjct:    1 MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 168          
BLAST of Ladybird vs. TrEMBL
Match: A0A564ZCM5 (Homeobox domain-containing protein (Fragment) OS=Hymenolepis diminuta OX=6216 GN=WMSIL1_LOCUS14540 PE=4 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.723e-29
Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 2
Query:  176 ALNSLINMTRS---QIQNMNESFR--------CGLETINHELMS---FYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            ALNSLI MTRS   Q+ N NE+ +         G+ +++ EL S     +NR    KRRK+RTTF++FQ+ ELE +F KQKYLTP DRD++A+EL LS+ QVITWFQNRRAK KRE  EL RD+
Sbjct:   41 ALNSLIEMTRSNSYQLGNSNETSKSKSYQKQATGM-SVSEELNSRSGGMSNRA--PKRRKTRTTFTSFQLAELEVYFSKQKYLTPTDRDQIASELGLSSTQVITWFQNRRAKKKRECAELERDV 161          
BLAST of Ladybird vs. TrEMBL
Match: A0A183ADJ2 (Homeobox domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS5027 PE=4 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 7.273e-29
Identity = 66/139 (47.48%), Postives = 90/139 (64.75%), Query Frame = 2
Query:  107 LLRNIEQSSRM---EAAGE---KYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            + R +E+SS+    E  G+     + +++AL++LI+MT S +Q +N      +   +   +   T      KRRK+RTTFSN Q+ ELE +F +QKYLTP DRD++A  L LSN QVITWFQNRRAKLKRE EEL RD+
Sbjct:  228 MCRGLEESSQGSGDECTGKGSRSPYGSNSALDALIHMTTSSMQRLNRKVDKPISPTDRLDLCTLTRGSQMTKRRKTRTTFSNSQLSELETNFNRQKYLTPTDRDRIAKHLGLSNTQVITWFQNRRAKLKREAEELERDI 366          
BLAST of Ladybird vs. TrEMBL
Match: A0A158QD83 (Homeobox domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS2561 PE=4 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.942e-28
Identity = 68/124 (54.84%), Postives = 86/124 (69.35%), Query Frame = 2
Query:  176 ALNSLINMTRS---QIQNMNESFR--------CGLETINHELMS---FYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            ALNSLI MTRS   Q+ N NE+ +         G+ +++ EL S     +NR    KRRK+RTTF++FQ+ ELE +F KQKYLTP DRD++A+EL LS+ QVITWFQNRRAK KRE  EL RD+
Sbjct:  159 ALNSLIEMTRSNSYQLGNSNETSKSKSYQKQATGM-SVSEELNSRSGGMSNRA--PKRRKTRTTFTSFQLAELEVYFSKQKYLTPTDRDQIASELGLSSTQVITWFQNRRAKKKRECAELERDV 279          
BLAST of Ladybird vs. TrEMBL
Match: A0A0A9WFM8 (Transcription factor LBX1 (Fragment) OS=Lygus hesperus OX=30085 GN=lbx1 PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 2.093e-27
Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 2
Query:  167 NHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            + + L++L  MT    + +N   + G        M+ ++NR   KK+RKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L LSN QVITWFQNRRAKLKR++EEL +D+
Sbjct:    4 DTSPLDALFQMTSKTFEELNGESQEG----QGSHMNMFSNRQQPKKKRKSRTAFTNHQIFELEKRFLYQKYLSPADRDEIAAQLGLSNAQVITWFQNRRAKLKRDMEELKKDV 112          
BLAST of Ladybird vs. Ensembl Cavefish
Match: ENSAMXT00000051218.1 (ladybird homeobox 1 [Source:NCBI gene;Acc:103034680])

HSP 1 Score: 106.301 bits (264), Expect = 8.931e-28
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  107 MTLFGQRNTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 185          
BLAST of Ladybird vs. Ensembl Cavefish
Match: lbx2 (transcription factor LBX1 [Source:NCBI gene;Acc:103021396])

HSP 1 Score: 105.531 bits (262), Expect = 1.682e-27
Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 2
Query:  257 NHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
              E M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  109 GREHMNAFGQRQASKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. Ensembl Cavefish
Match: ENSAMXT00000000488.2 (transcription factor LBX1-like [Source:NCBI gene;Acc:103028441])

HSP 1 Score: 105.145 bits (261), Expect = 3.817e-27
Identity = 59/168 (35.12%), Postives = 90/168 (53.57%), Query Frame = 2
Query:    2 MKRSSFHIDELLIEKLXXXXXXXXXXXXXXXXXXXLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M RSS H+    +   S     S+     +   +   R +  S ++           +AL++L  +T +  + M             + ++    RI  KKRRK+RT F+N Q+ ELEK F  Q+YL+P DRD++A +L L+N QVITWFQNRRAKLKR+++E+  D+
Sbjct:   19 MPRSSDHVPPKPLTPFSIADILSKPSIKPSIPRVGTCRGVSWSVKVRGRSSGTPQEPSALSALQELTNNTFRAMELVTTAAPPAGGKDELALVAQRIHPKKRRKARTAFTNHQLCELEKRFLFQRYLSPADRDRIAQQLGLTNAQVITWFQNRRAKLKRDLDEMRADV 186          
BLAST of Ladybird vs. Ensembl Cavefish
Match: tlx3b (T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-021021-1])

HSP 1 Score: 73.559 bits (179), Expect = 1.945e-15
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR    KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  140 TVARRIGHPYQNRTP-PKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKTLKMTDAQVKTWFQNRRTKWRRQTAE 218          
BLAST of Ladybird vs. Ensembl Cavefish
Match: ENSAMXT00000055288.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000111.1:341656:348959:-1 gene:ENSAMXG00000038858.1 transcript:ENSAMXT00000055288.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 72.4034 bits (176), Expect = 4.292e-15
Identity = 36/71 (50.70%), Postives = 47/71 (66.20%), Query Frame = 2
Query:  278 YTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            Y NR +  KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  135 YQNR-TPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 204          
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: barhl2 (BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153])

HSP 1 Score: 72.4034 bits (176), Expect = 6.471e-17
Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 2
Query:  299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            KK RK+RT FS+ Q+ +LE+ F++QKYL+  DR +LA+ L+LS+ QV TW+QNRR K KR+ 
Sbjct:    3 KKPRKARTAFSDHQLTQLERSFERQKYLSVQDRMELASSLSLSDTQVKTWYQNRRTKWKRQT 64          
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: barhl2 (BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050913-153])

HSP 1 Score: 72.4034 bits (176), Expect = 9.919e-17
Identity = 34/62 (54.84%), Postives = 48/62 (77.42%), Query Frame = 2
Query:  299 KKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            KK RK+RT FS+ Q+ +LE+ F++QKYL+  DR +LA+ L+LS+ QV TW+QNRR K KR+ 
Sbjct:    3 KKPRKARTAFSDHQLTQLERSFERQKYLSVQDRMELASSLSLSDTQVKTWYQNRRTKWKRQT 64          
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: hhex (pep scaffold:Pmarinus_7.0:GL476649:273574:289580:-1 gene:ENSPMAG00000009445.1 transcript:ENSPMAT00000010429.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:hhex)

HSP 1 Score: 70.0922 bits (170), Expect = 5.161e-15
Identity = 38/79 (48.10%), Postives = 51/79 (64.56%), Query Frame = 2
Query:  266 LMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRD 502
            L + +  R +HK R+  +  FS+ Q  ELE+ F++QKYL+P +R  LA  L LS  QV TWFQNRRAK +R  +EL  D
Sbjct:  131 LWAPFLPRPAHK-RKGGQVRFSSEQTVELERKFERQKYLSPGERKGLAKLLQLSERQVKTWFQNRRAKWRRLKQELPSD 208          
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: tlx1 (T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2])

HSP 1 Score: 69.3218 bits (168), Expect = 1.747e-14
Identity = 35/75 (46.67%), Postives = 46/75 (61.33%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLK 475
            T+ H     Y NR    KR+K RT+F+  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +
Sbjct:  217 TVGHP----YQNRTP-PKRKKPRTSFTRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWR 286          
BLAST of Ladybird vs. Ensembl Sea Lamprey
Match: ENSPMAT00000001480.1 (pep scaffold:Pmarinus_7.0:GL487501:66:2428:-1 gene:ENSPMAG00000001338.1 transcript:ENSPMAT00000001480.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 63.929 bits (154), Expect = 8.497e-14
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 2
Query:  302 KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAK 469
            +RRK+RT F++ Q+  LE+ F +Q+YL+  +R  LAT L LS  QV TWFQNRR K
Sbjct:    5 RRRKARTVFTDSQLSGLERRFVRQRYLSTPERVDLATALGLSETQVKTWFQNRRMK 60          
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO42702 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S0N4])

HSP 1 Score: 96.6709 bits (239), Expect = 3.739e-26
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 2
Query:  287 RISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            R+S +KRRK RT F+N Q+ ELE+ F  QKYL+P DRD +A  L L   Q+ITWFQNRRAK++R+VEEL  D+
Sbjct:   13 RLSQRKRRKPRTCFTNRQIIELERRFMYQKYLSPSDRDDIAMALGLPGAQIITWFQNRRAKMRRDVEELKSDV 85          
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO34127 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SQ94])

HSP 1 Score: 70.4774 bits (171), Expect = 1.445e-16
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 2
Query:  305 RRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            ++K RT F+  Q+ ELEK FQ QKYL   +R +LA  L L++ QV TWFQNRR KLKR+ +E
Sbjct:    1 KKKPRTAFTESQISELEKRFQSQKYLGSKERSELAGTLGLTDTQVKTWFQNRRMKLKRQRQE 62          
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO49466 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG38])

HSP 1 Score: 67.781 bits (164), Expect = 1.983e-15
Identity = 33/58 (56.90%), Postives = 40/58 (68.97%), Query Frame = 2
Query:  317 RTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            R  FSN Q + LEK FQ QKYLT  DR +LA+ L LS+NQV  WFQNRR K +++  E
Sbjct:    1 RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLSDNQVKVWFQNRRMKWRQDARE 58          
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO46621 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RPR9])

HSP 1 Score: 73.559 bits (179), Expect = 2.697e-15
Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  227 ESFRCGLETINHELMSFYTNRISHKKRRK------SRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            + FR G + +    M F T+    +KR++      +RT F+N Q+RELE  FQK KYLT   R +LA  L LS+ Q+  WFQNRR KLKR++
Sbjct: 1012 DMFRTGRKGLRGRDM-FSTDVYRRRKRKRDPSKKRTRTAFTNTQIRELEAEFQKNKYLTITRRAELANSLELSDTQIKIWFQNRRTKLKRKL 1102          
BLAST of Ladybird vs. Ensembl Nematostella
Match: EDO42443 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S1E2])

HSP 1 Score: 67.0106 bits (162), Expect = 3.839e-15
Identity = 32/58 (55.17%), Postives = 40/58 (68.97%), Query Frame = 2
Query:  317 RTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            R  FSN Q + LEK FQ QKYLT  DR +LA+ L L++NQV  WFQNRR K +++  E
Sbjct:    1 RAVFSNLQRKGLEKRFQVQKYLTKADRHQLASMLGLTDNQVKVWFQNRRMKWRQDARE 58          
BLAST of Ladybird vs. Ensembl Medaka
Match: lbx1b (ladybird homeobox 1 [Source:NCBI gene;Acc:101160879])

HSP 1 Score: 107.457 bits (267), Expect = 4.135e-28
Identity = 48/79 (60.76%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  269 MSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            M+ +  R + KKRRKSRT F+N Q+ ELEK F  QKYL+P DRD++A +L L+N QVITWFQNRRAKLKR++EE+  D+
Sbjct:  113 MTLFGQRTTPKKRRKSRTAFTNHQIYELEKRFLYQKYLSPADRDQIAQQLGLTNAQVITWFQNRRAKLKRDLEEMKADV 191          
BLAST of Ladybird vs. Ensembl Medaka
Match: ENSORLT00000004940.2 (T cell leukemia homeobox 3 [Source:NCBI gene;Acc:101161249])

HSP 1 Score: 75.485 bits (184), Expect = 4.498e-16
Identity = 47/126 (37.30%), Postives = 64/126 (50.79%), Query Frame = 2
Query:  137 MEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSF-YTNRISHK-------KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            + A G    +  NA+     +    I N     R   + I+  L+ F  T RI H        KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  108 VTAPGPPAPV-QNAVPGFGGLCFPWIGN-----RFAKDRISAALVPFAVTRRIGHPYQNRTPPKRKKPRTSFSRVQICELEKRFHRQKYLASAERAALAKSLKMTDAQVKTWFQNRRTKWRRQTAE 227          
BLAST of Ladybird vs. Ensembl Medaka
Match: tlx1 (T cell leukemia homeobox 1 [Source:NCBI gene;Acc:101163994])

HSP 1 Score: 73.9442 bits (180), Expect = 1.824e-15
Identity = 37/80 (46.25%), Postives = 49/80 (61.25%), Query Frame = 2
Query:  251 TINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            T+   +   Y NR    KR+K RT+FS  Q+ ELEK F +QKYL   +R  LA  L +++ QV TWFQNRR K +R+  E
Sbjct:  149 TVTRRIGHPYQNRTP-PKRKKPRTSFSRLQICELEKRFHRQKYLASAERAALAKALKMTDAQVKTWFQNRRTKWRRQTAE 227          
BLAST of Ladybird vs. Ensembl Medaka
Match: barhl1a (BarH like homeobox 1 [Source:NCBI gene;Acc:101158364])

HSP 1 Score: 72.7886 bits (177), Expect = 2.936e-15
Identity = 38/70 (54.29%), Postives = 48/70 (68.57%), Query Frame = 2
Query:  272 SFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKRE 481
            SF    +  KK RK+RT FS+ Q+  LE+ FQKQKYL+  DR +LA  L LS+ QV TW+QNRR K KR+
Sbjct:  129 SFDPVGVRLKKPRKARTAFSDQQLSRLERSFQKQKYLSVQDRIELAASLQLSDTQVKTWYQNRRTKWKRQ 198          
BLAST of Ladybird vs. Ensembl Medaka
Match: bsx (brain specific homeobox [Source:NCBI gene;Acc:101161363])

HSP 1 Score: 69.3218 bits (168), Expect = 3.602e-14
Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 2
Query:  296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            H +RRK+RT FS+ Q+  LEK F+ Q+YL+  +R +LAT L+LS  QV TWFQNRR K K+++
Sbjct:   98 HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKKQL 160          
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000063219.1 (SMESG000063219.1)

HSP 1 Score: 297.36 bits (760), Expect = 7.375e-104
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 2
Query:    2 MKRSSFHIDELLIEKLXXXXXXXXXXXXXXXXXXXLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 505
            MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL
Sbjct:    1 MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAGEKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEELHRDL 168          
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000074896.1 (SMESG000074896.1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.964e-15
Identity = 35/64 (54.69%), Postives = 49/64 (76.56%), Query Frame = 2
Query:  293 SHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            S KK RK+RT F++ Q+ ELEK+F++QKYL+  DR +LA +L L++ QV TW+QNRR K KR+ 
Sbjct:   85 SGKKPRKARTAFTDHQLNELEKNFEQQKYLSVQDRMELAAKLRLTDTQVKTWYQNRRTKWKRQT 148          
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000030375.1 (SMESG000030375.1)

HSP 1 Score: 71.633 bits (174), Expect = 7.835e-15
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 2
Query:  284 NRISHKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREV 484
            +R   KK RK+RT F++ Q+ ELE++F +QKYL+  DR +LA  L LS+ QV TW+QNRR K KR+ 
Sbjct:  128 DRSKSKKPRKARTAFTDLQLNELERNFDRQKYLSVQDRMELANRLRLSDTQVKTWYQNRRTKWKRQT 194          
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000017206.1 (SMESG000017206.1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.946e-14
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 2
Query:  278 YTNRISHK-------KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKREVEE 490
            Y  R+ H        KR+K RT+F+  Q+ ELE+ F +QKYL   +R  LA +L ++++QV TWFQNRR K +R+  E
Sbjct:   62 YPRRVGHPYQNRTPPKRKKPRTSFNRQQIMELERRFHRQKYLASSERCDLAKDLDMTDSQVKTWFQNRRTKWRRQTSE 139          
BLAST of Ladybird vs. Planmine SMEST
Match: SMESG000033607.1 (SMESG000033607.1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.110e-13
Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 2
Query:  296 HKKRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWFQNRRAKLKR 478
            H +RRK+RT FS+ Q+  LEK F+ Q+YL+  +R +LA +L LS +QV TWFQNRR K K+
Sbjct:  197 HSRRRKARTVFSDQQLNGLEKRFESQRYLSTPERIELANQLNLSESQVKTWFQNRRMKYKK 257          
The following BLAST results are available for this feature:
BLAST of Ladybird vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
LBX15.272e-2860.76ladybird homeobox 1 [Source:HGNC Symbol;Acc:HGNC:1... [more]
LBX21.012e-2464.29ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1... [more]
LBX22.131e-2464.29ladybird homeobox 2 [Source:HGNC Symbol;Acc:HGNC:1... [more]
TLX33.207e-1546.25T cell leukemia homeobox 3 [Source:HGNC Symbol;Acc... [more]
TLX23.101e-1446.43T cell leukemia homeobox 2 [Source:HGNC Symbol;Acc... [more]
back to top
BLAST of Ladybird vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ceh-311.725e-1450.77Homeobox protein ceh-31 [Source:UniProtKB/Swiss-P... [more]
ceh-302.147e-1453.13Homeobox protein ceh-30 [Source:UniProtKB/Swiss-P... [more]
ceh-302.147e-1453.13Homeobox protein ceh-30 [Source:UniProtKB/Swiss-P... [more]
ceh-94.174e-1441.76Homeobox protein ceh-9 [Source:UniProtKB/Swiss-Pr... [more]
ceh-281.123e-1250.00C. Elegans Homeobox; NK-2 family homeodomain prote... [more]
back to top
BLAST of Ladybird vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lbe1.288e-2660.76gene:FBgn0011278 transcript:FBtr0084091[more]
lbl7.145e-2660.76gene:FBgn0008651 transcript:FBtr0084092[more]
lbl8.655e-2660.76gene:FBgn0008651 transcript:FBtr0332438[more]
B-H21.242e-1555.74gene:FBgn0004854 transcript:FBtr0074429[more]
C151.543e-1552.11gene:FBgn0004863 transcript:FBtr0084111[more]
back to top
BLAST of Ladybird vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lbx1a2.290e-2760.76ladybird homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-040... [more]
lbx23.636e-2757.83ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-0012... [more]
lbx23.636e-2757.83ladybird homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-0012... [more]
lbx1b9.238e-2760.76ladybird homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050... [more]
CABZ01067175.11.043e-1546.25T-cell leukemia homeobox protein 3-like [Source:NC... [more]
back to top
BLAST of Ladybird vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lbx11.365e-2760.76ladybird homeobox 1 [Source:NCBI gene;Acc:780014][more]
soga11.079e-1647.62suppressor of glucose, autophagy associated 1 [Sou... [more]
jup2.427e-1546.25junction plakoglobin [Source:Xenbase;Acc:XB-GENE-4... [more]
ENSXETT00000011915.11.880e-1445.00T cell leukemia homeobox 1 [Source:NCBI gene;Acc:1... [more]
BARX12.715e-1453.03BARX homeobox 1 [Source:NCBI gene;Acc:100491751][more]
back to top
BLAST of Ladybird vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Lbx13.691e-2860.76ladybird homeobox 1 [Source:MGI Symbol;Acc:MGI:104... [more]
Lbx27.850e-2462.32ladybird homeobox 2 [Source:MGI Symbol;Acc:MGI:134... [more]
Tlx32.224e-1546.25T cell leukemia, homeobox 3 [Source:MGI Symbol;Acc... [more]
Tlx21.205e-1446.43T cell leukemia, homeobox 2 [Source:MGI Symbol;Acc... [more]
Tlx12.869e-1449.30T cell leukemia, homeobox 1 [Source:MGI Symbol;Acc... [more]
back to top
BLAST of Ladybird vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P52954|LBX1_HUMAN2.532e-2760.76Transcription factor LBX1 OS=Homo sapiens OX=9606 ... [more]
sp|P52955|LBX1_MOUSE2.582e-2760.76Transcription factor LBX1 OS=Mus musculus OX=10090... [more]
sp|Q1XID0|LBX1_RAT2.737e-2760.76Transcription factor LBX1 OS=Rattus norvegicus OX=... [more]
sp|Q26604|SMOX5_SCHMA3.642e-2753.40Homeobox protein SMOX-5 OS=Schistosoma mansoni OX=... [more]
sp|Q2PYN8|LBX1_XENLA6.099e-2760.76Transcription factor LBX1 OS=Xenopus laevis OX=835... [more]
back to top
BLAST of Ladybird vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A291FGJ41.940e-100100.00Ladybird (Fragment) OS=Schmidtea mediterranea OX=7... [more]
A0A564ZCM51.723e-2954.84Homeobox domain-containing protein (Fragment) OS=H... [more]
A0A183ADJ27.273e-2947.48Homeobox domain-containing protein OS=Echinostoma ... [more]
A0A158QD835.942e-2854.84Homeobox domain-containing protein OS=Hymenolepis ... [more]
A0A0A9WFM82.093e-2749.56Transcription factor LBX1 (Fragment) OS=Lygus hesp... [more]
back to top
BLAST of Ladybird vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000051218.18.931e-2860.76ladybird homeobox 1 [Source:NCBI gene;Acc:10303468... [more]
lbx21.682e-2759.04transcription factor LBX1 [Source:NCBI gene;Acc:10... [more]
ENSAMXT00000000488.23.817e-2735.12transcription factor LBX1-like [Source:NCBI gene;A... [more]
tlx3b1.945e-1546.25T cell leukemia homeobox 3b [Source:ZFIN;Acc:ZDB-G... [more]
ENSAMXT00000055288.14.292e-1550.70pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
back to top
BLAST of Ladybird vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
barhl26.471e-1754.84BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050... [more]
barhl29.919e-1754.84BarH-like homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-050... [more]
hhex5.161e-1548.10pep scaffold:Pmarinus_7.0:GL476649:273574:289580:-... [more]
tlx11.747e-1446.67T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GE... [more]
ENSPMAT00000001480.18.497e-1453.57pep scaffold:Pmarinus_7.0:GL487501:66:2428:-1 gene... [more]
back to top
BLAST of Ladybird vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Ladybird vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO427023.739e-2658.90Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO341271.445e-1654.84Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO494661.983e-1556.90Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO466212.697e-1544.57Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO424433.839e-1555.17Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
back to top
BLAST of Ladybird vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
lbx1b4.135e-2860.76ladybird homeobox 1 [Source:NCBI gene;Acc:10116087... [more]
ENSORLT00000004940.24.498e-1637.30T cell leukemia homeobox 3 [Source:NCBI gene;Acc:1... [more]
tlx11.824e-1546.25T cell leukemia homeobox 1 [Source:NCBI gene;Acc:1... [more]
barhl1a2.936e-1554.29BarH like homeobox 1 [Source:NCBI gene;Acc:1011583... [more]
bsx3.602e-1453.97brain specific homeobox [Source:NCBI gene;Acc:1011... [more]
back to top
BLAST of Ladybird vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000063219.17.375e-104100.00SMESG000063219.1[more]
SMESG000074896.12.964e-1554.69SMESG000074896.1[more]
SMESG000030375.17.835e-1552.24SMESG000030375.1[more]
SMESG000017206.14.946e-1443.59SMESG000017206.1[more]
SMESG000033607.12.110e-1354.10SMESG000033607.1[more]
back to top
Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30025723 ID=SMED30025723|Name=Ladybird|organism=Schmidtea mediterranea sexual|type=transcript|length=632bp
TATGAAACGGTCTTCATTTCACATCGATGAACTTTTAATAGAAAAATTAT
CAAAAAATAGAAAGAAATCAGAAGAATTTTCATCTAATAATAACATTAGC
ATCAAATTGTTGAGGAATATAGAACAATCATCACGAATGGAAGCAGCTGG
GGAAAAATACTTTATCAATCATAATGCACTGAATTCATTAATTAATATGA
CTCGATCGCAAATTCAAAACATGAATGAAAGTTTTCGCTGTGGACTTGAG
ACTATTAATCATGAACTGATGTCCTTTTATACCAATAGAATTTCTCACAA
GAAAAGAAGAAAGTCCAGAACAACATTTTCGAATTTCCAAGTCAGAGAAT
TAGAAAAACATTTTCAAAAACAGAAATATCTCACTCCTTTAGACAGAGAT
AAATTAGCAACAGAACTTGCTTTATCAAATAATCAAGTAATAACTTGGTT
TCAAAATCGAAGAGCCAAATTAAAGCGGGAAGTAGAAGAATTGCATAGAG
ATTTAAAAGAAGCCCACAAGATAAAAGAAATTAAACACTGATATGCCAAA
AAAGTACCAGTTGCCCATTACCCATAAGTGGGATACCTTTTATTGTAATA
ATTGTAAATTTGATTAAAAGAGATCGGAAGAG
back to top

protein sequence of SMED30025723-orf-1

>SMED30025723-orf-1 ID=SMED30025723-orf-1|Name=SMED30025723-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=180bp
MKRSSFHIDELLIEKLSKNRKKSEEFSSNNNISIKLLRNIEQSSRMEAAG
EKYFINHNALNSLINMTRSQIQNMNESFRCGLETINHELMSFYTNRISHK
KRRKSRTTFSNFQVRELEKHFQKQKYLTPLDRDKLATELALSNNQVITWF
QNRRAKLKREVEELHRDLKEAHKIKEIKH*
back to top
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000240body wall musculature
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR016030CblAdoTrfase-like
IPR009057Homeobox-like_sf
IPR017970Homeobox_CS
Vocabulary: molecular function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: biological process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: cellular component
TermDefinition
GO:0005634nucleus
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 147..174
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 90..175
e-value: 3.1E-22
score: 79.9
NoneNo IPR availablePANTHERPTHR24336:SF9TRANSCRIPTION FACTOR LBX1coord: 49..174
NoneNo IPR availablePANTHERPTHR24336FAMILY NOT NAMEDcoord: 49..174
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 102..164
e-value: 4.8E-22
score: 89.2
IPR001356Homeobox domainPFAMPF00046Homeodomaincoord: 103..159
e-value: 8.3E-20
score: 70.4
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 100..160
score: 20.504
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 103..160
e-value: 2.36464E-16
score: 67.6536
IPR017970Homeobox, conserved sitePROSITEPS00027HOMEOBOX_1coord: 135..158
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 89..160