Dynein light chain Tctex-type 3

Overview
NameDynein light chain Tctex-type 3
Smed IDSMED30025580
Length (bp)594
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Dynein light chain Tctex-type 3 (SMED30025580) t-SNE clustered cells

Violin plots show distribution of expression levels for Dynein light chain Tctex-type 3 (SMED30025580) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Dynein light chain Tctex-type 3 (SMED30025580) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Dynein light chain Tctex-type 3 (SMED30025580) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30025580

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 8

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
prepharyngeal regionSMED30025580h1SMcG0022718 SmedASXL_006019SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
prepharyngeal regionSMED30025580h1SMcG0022718 SmedASXL_006019SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30025580h1SMcG0022718 dd_Smed_v4_6713_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30025580h1SMcG0022718 dd_Smed_v4_6713_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parapharyngeal regionSMED30025580h1SMcG0022718 dd_Smed_v6_6713_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
parapharyngeal regionSMED30025580h1SMcG0022718 dd_Smed_v6_6713_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
head regionSMED30025580h1SMcG0022718 OX_Smed_1.0.19601ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
head regionSMED30025580h1SMcG0022718 OX_Smed_1.0.19601ox_Smed_v2PMID:24238224
Kao et al., 2013		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Human
Match: DYNLT1 (dynein light chain Tctex-type 1 [Source:HGNC Symbol;Acc:HGNC:11697])

HSP 1 Score: 101.293 bits (251), Expect = 2.259e-27
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +V+Q + QL KL K ++YIV C+I Q N AGLH+AS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Human
Match: DYNLT3 (dynein light chain Tctex-type 3 [Source:HGNC Symbol;Acc:HGNC:11694])

HSP 1 Score: 97.4413 bits (241), Expect = 8.647e-26
Identity = 41/101 (40.59%), Postives = 65/101 (64.36%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            F  +E   I K+C+  +L    YN   ++QW+A IV+Q +  LVKL K+Y+YIV C + Q +  G H+AS C+WD T+DG CT+++ N  + C++ ++ IA
Sbjct:   13 FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIA 113
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Human
Match: DYNLT3 (dynein light chain Tctex-type 3 [Source:HGNC Symbol;Acc:HGNC:11694])

HSP 1 Score: 97.4413 bits (241), Expect = 1.091e-25
Identity = 41/101 (40.59%), Postives = 65/101 (64.36%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            F  +E   I K+C+  +L    YN   ++QW+A IV+Q +  LVKL K+Y+YIV C + Q +  G H+AS C+WD T+DG CT+++ N  + C++ ++ IA
Sbjct:   19 FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIA 119
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Human
Match: DYNLT3 (dynein light chain Tctex-type 3 [Source:HGNC Symbol;Acc:HGNC:11694])

HSP 1 Score: 91.6633 bits (226), Expect = 4.092e-23
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILC 382
            F  +E   I K+C+  +L    YN   ++QW+A IV+Q +  LVKL K+Y+YIV C + Q +  G H+AS C+WD T+DG CT+++ N  + C
Sbjct:   13 FNAEEAHNIVKECVDGVLGGEDYNHNNINQWTASIVEQSLTHLVKLGKAYKYIVTCAVVQKSAYGFHTASSCFWDTTSDGTCTVRWENRTMNC 105
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Celegans
Match: dylt-1 (DYnein Light chain (Tctex type) [Source:UniProtKB/TrEMBL;Acc:Q19416])

HSP 1 Score: 49.2914 bits (116), Expect = 5.523e-8
Identity = 25/103 (24.27%), Postives = 54/103 (52.43%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSAT-YNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQ-DNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
               ++V  I K+ + +++ ++T Y      QW+   V+Q   +LV   K Y+Y+V     Q  + +GL+ +++ YW++  D     ++    +L ++Y++ IA
Sbjct:    3 LAEEDVHMIIKQVLDEVVGASTQYTHKDSVQWNQKAVEQITKKLVAAGKPYKYVVTSSFLQISSGSGLNVSTISYWNKVTDSSYMYRWEAKTMLAIVYVFAIA 105
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Fly
Match: Dlc90F (gene:FBgn0024432 transcript:FBtr0083575)

HSP 1 Score: 87.8113 bits (216), Expect = 2.219e-22
Identity = 37/106 (34.91%), Postives = 63/106 (59.43%), Query Frame = 2 
Query:   89 KKMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            ++ + F+ D+V +  K+ I   +    Y    V+ W+  +V+ C+  L K  K Y+YIV  +I Q N AGLH+AS CYW+   DG CT+++ N  + C++ ++G+A
Sbjct:    5 REESQFIVDDVSKTIKEAIETTIGGNAYQHDKVNNWTGQVVENCLTVLTKEQKPYKYIVTAMIMQKNGAGLHTASSCYWNNDTDGSCTVRWENKTMYCIVSVFGLA 110
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Zebrafish
Match: dynlt1 (dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9])

HSP 1 Score: 106.686 bits (265), Expect = 1.469e-29
Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            + F+ DEV  I K+ +  ++    Y    VSQW++ + +QC+GQL KL K ++YIV C+I Q N AGL SAS C+WD T DG CT+++ N  + C++ ++G+A
Sbjct:   10 SAFIVDEVSSIVKESLEAVIGRNMYEHNRVSQWTSSVAEQCLGQLSKLGKPFKYIVTCIIMQKNGAGLQSASSCFWDNTTDGSCTVRWENKHLYCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Zebrafish
Match: dynlt1 (dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9])

HSP 1 Score: 101.679 bits (252), Expect = 1.240e-27
Identity = 44/103 (42.72%), Postives = 68/103 (66.02%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            + F+ DEV  I K+  + ++    Y    VSQW++ + +QC+GQL KL K ++YIV C+I Q N AGL SAS C+WD T DG CT+++ N  + C++ ++G+A
Sbjct:   10 SAFIVDEVSSIVKEAKA-VIGRNMYEHNRVSQWTSSVAEQCLGQLSKLGKPFKYIVTCIIMQKNGAGLQSASSCFWDNTTDGSCTVRWENKHLYCIVSVFGLA 111
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Zebrafish
Match: dynlt3 (dynein, light chain, Tctex-type 3 [Source:ZFIN;Acc:ZDB-GENE-040927-24])

HSP 1 Score: 100.908 bits (250), Expect = 2.080e-27
Identity = 42/101 (41.58%), Postives = 67/101 (66.34%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            F PD+   + K+CI  I+    Y++  V+QW+A IV+  + QLVK  K ++YIVNC + Q + AGLH+A+ CYWD T DG CT+++ N  + C++ ++ +A
Sbjct:   12 FNPDDASNVVKECIEGIIGGVDYSQNKVNQWTASIVEHSLTQLVKQGKPFKYIVNCAVMQKSGAGLHTANSCYWDTTTDGSCTVRWENRTMYCVVSVFAVA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Zebrafish
Match: DYNLT1 (si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292])

HSP 1 Score: 100.138 bits (248), Expect = 4.531e-27
Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DE+  I K+ +   + + +Y    ++QW + I +  + QL KL K ++YIV C+I Q N AGLH+AS C+WD T DG CT+++ N  I C++ ++G+A
Sbjct:    9 TTFVVDEITTIIKETVETTIGNNSYQHEKINQWMSSIAELSLSQLTKLGKPFKYIVTCIILQKNGAGLHTASSCFWDNTTDGSCTVRWENKTIYCIVSVFGLA 111
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Zebrafish
Match: si:dkey-148f10.4 (si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292])

HSP 1 Score: 99.7525 bits (247), Expect = 6.130e-27
Identity = 42/103 (40.78%), Postives = 66/103 (64.08%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DE+  I K+ +   + + +Y    ++QW + I +  + QL KL K ++YIV C+I Q N AGLH+AS C+WD T DG CT+++ N  I C++ ++G+A
Sbjct:    9 TTFVVDEITTIIKETVETTIGNNSYQHEKINQWMSSIAELSLSQLTKLGKPFKYIVTCIILQKNGAGLHTASSCFWDNTTDGSCTVRWENKTIYCIVSVFGLA 111
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Xenopus
Match: tcf7 (transcription factor 7 [Source:Xenbase;Acc:XB-GENE-855462])

HSP 1 Score: 98.2117 bits (243), Expect = 3.461e-26
Identity = 42/101 (41.58%), Postives = 63/101 (62.38%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            FV DE+  I K+ I   +    Y    V+QW+  +V+Q + QL KL K ++YIV C+I Q N AGLH+AS C+WD   DG CT+++ N  + C++  +G+A
Sbjct:   12 FVVDEISNIIKESIESAIGGNAYQHNKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDNATDGSCTVRWENKTMYCIVSAFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Xenopus
Match: DYNLT3 (dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:101732306])

HSP 1 Score: 92.8189 bits (229), Expect = 4.536e-24
Identity = 37/106 (34.91%), Postives = 65/106 (61.32%), Query Frame = 2 
Query:   89 KKMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            K    F  DE   I K+C+  IL    Y+   +++W + +V+Q +  LVK+ K+++YIV+C + Q   +GLH+AS C+WD   DG CT+++ N  + C++ ++ +A
Sbjct:    6 KGEAAFSGDEASIIVKECVDVILGGVDYDENRINEWMSAVVEQSLTHLVKMGKAFKYIVSCTVMQKRGSGLHAASSCFWDNNTDGSCTVRWENRTMYCIVSVFAVA 111
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Xenopus
Match: tcf7 (transcription factor 7 [Source:Xenbase;Acc:XB-GENE-855462])

HSP 1 Score: 76.6406 bits (187), Expect = 1.669e-17
Identity = 36/88 (40.91%), Postives = 51/88 (57.95%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTN 367
            FV DE+  I K+ I   +    Y    V+QW+  +V+Q + QL KL K ++YIV C+I Q N AGLH+AS C+WD   D      ++N
Sbjct:   12 FVVDEISNIIKESIESAIGGNAYQHNKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDNATDENDEPPHSN 99
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Mouse
Match: Dynlt1f (dynein light chain Tctex-type 1F [Source:MGI Symbol;Acc:MGI:3780996])

HSP 1 Score: 100.908 bits (250), Expect = 2.191e-27
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +++Q + QL KL + ++YIV C+I Q N AGLHSAS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVTCVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Mouse
Match: Dynlt1c (dynein light chain Tctex-type 1C [Source:MGI Symbol;Acc:MGI:3807476])

HSP 1 Score: 100.908 bits (250), Expect = 2.191e-27
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +++Q + QL KL + ++YIV C+I Q N AGLHSAS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVTCVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Mouse
Match: Dynlt1b (dynein light chain Tctex-type 1B [Source:MGI Symbol;Acc:MGI:98643])

HSP 1 Score: 100.908 bits (250), Expect = 2.191e-27
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +++Q + QL KL + ++YIV C+I Q N AGLHSAS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVTCVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Mouse
Match: Dynlt1a (dynein light chain Tctex-type 1A [Source:MGI Symbol;Acc:MGI:3807506])

HSP 1 Score: 100.908 bits (250), Expect = 2.191e-27
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +++Q + QL KL + ++YIV C+I Q N AGLHSAS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVTCVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Mouse
Match: Dynlt3 (dynein light chain Tctex-type 3 [Source:MGI Symbol;Acc:MGI:1914367])

HSP 1 Score: 98.2117 bits (243), Expect = 2.616e-26
Identity = 42/101 (41.58%), Postives = 65/101 (64.36%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            F  DE   I K+C+  +L    YN   ++QW+A IV+Q +  LVKL K+Y+YIV C + Q +  G H+AS C+WD T+DG CTI++ N  + C++ ++ +A
Sbjct:   13 FNADEAHNIVKECVDGVLGGNDYNENNINQWTASIVEQSITHLVKLGKAYKYIVTCAVVQRSPYGFHTASSCFWDTTSDGTCTIRWENRTMNCIVNVFAVA 113
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. UniProt/SwissProt
Match: sp|Q9Z336|DYLT1_RAT (Dynein light chain Tctex-type 1 OS=Rattus norvegicus OX=10116 GN=Dynlt1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.017e-26
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +V+Q + QL KL K ++YIV C+I Q N AGLH+AS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. UniProt/SwissProt
Match: sp|P63172|DYLT1_HUMAN (Dynein light chain Tctex-type 1 OS=Homo sapiens OX=9606 GN=DYNLT1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.085e-26
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +V+Q + QL KL K ++YIV C+I Q N AGLH+AS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. UniProt/SwissProt
Match: sp|P63171|DYLT1_BOVIN (Dynein light chain Tctex-type 1 OS=Bos taurus OX=9913 GN=DYNLT1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.085e-26
Identity = 43/103 (41.75%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +V+Q + QL KL K ++YIV C+I Q N AGLH+AS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. UniProt/SwissProt
Match: sp|P51807|DYLT1_MOUSE (Dynein light chain Tctex-type 1 OS=Mus musculus OX=10090 GN=Dynlt1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.532e-26
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW+  +++Q + QL KL + ++YIV C+I Q N AGLHSAS C+WD + DG CT+++ N  + C++  +G++
Sbjct:   10 TAFVVDEVSSIVKEAIESAIGGNAYQHSKVNQWTTNVLEQTLSQLTKLGRPFKYIVTCVIMQKNGAGLHSASSCFWDSSTDGSCTVRWENKTMYCIVSTFGLS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. UniProt/SwissProt
Match: sp|Q6XXL8|DYLT3_SHEEP (Dynein light chain Tctex-type 3 OS=Ovis aries OX=9940 GN=DYNLT3 PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.752e-26
Identity = 43/101 (42.57%), Postives = 66/101 (65.35%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            F  DE   I K+CI  +L    YN+  ++QW+A IV+Q +  LVKL K+Y+YIV C + Q +  G H+AS C+WD T+DG CT+++ N  + C++ ++ IA
Sbjct:   13 FNADEAHNIVKECIDGVLGGEDYNQNNINQWTASIVEQSLAHLVKLGKAYKYIVTCAVVQRSPYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVFAIA 113
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. TrEMBL
Match: C1LDZ2 (Dynein light chain Tctex-type 1 (T-complex testis-specific protein 1 homolog) OS=Schistosoma japonicum OX=6182 GN=EWB00_010314 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.328e-28
Identity = 45/103 (43.69%), Postives = 71/103 (68.93%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FVPDEV  I K+ I  ++ S++Y+   V QW++ +++QC+  L KL K ++YIV C+I Q + AGLH+AS CYWD + DG CT+K+ N  +  ++ ++G+A
Sbjct:   10 TTFVPDEVKNIVKESIESVVGSSSYSHSKVQQWTSSVIEQCLSHLTKLGKPFKYIVTCVIMQKSGAGLHTASSCYWDSSTDGSCTVKWENKSMYFIVTVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. TrEMBL
Match: G4VSR3 (T-complex-associated-testis-expressed 1-related OS=Schistosoma mansoni OX=6183 GN=Smp_143780 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.822e-28
Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I  I+ S++Y+   V QW++ +++QC+ QL KL K ++YIV C+I Q + AGLH+AS CYWD T DG CT+K+ N  +  ++ ++G+A
Sbjct:   10 TTFVQDEVKNIVKESIEGIIGSSSYSHNKVQQWTSSVIEQCLSQLTKLGKPFKYIVTCVIMQKSGAGLHTASSCYWDSTTDGSCTVKWENKSMYFIVTVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. TrEMBL
Match: V3ZR43 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_236041 PE=4 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.658e-27
Identity = 48/103 (46.60%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ +   +   TY    V+QW++ +V+QC+ QL KL K ++YIV C+I Q N AGLH+AS CYWD T DG CTI++ N  + C++ ++G+A
Sbjct:   10 TAFVIDEVTTIIKEAVEGAIGGNTYQHNKVNQWTSNVVEQCLNQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCYWDNTTDGSCTIRWENKTMYCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. TrEMBL
Match: A0A0B6Z9T4 (Uncharacterized protein OS=Arion vulgaris OX=1028688 GN=ORF51762 PE=4 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.775e-27
Identity = 44/103 (42.72%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ +   +  + Y    V+QW++ +V+QC+ QL KL K ++YIV C+I Q N AGLH+AS C+WD + DG CT+++ N  + C++ ++G+A
Sbjct:   10 TTFVVDEVTNIIKEAVEGAIGGSGYQHNKVNQWTSTVVEQCLNQLTKLGKPFKYIVTCVIMQKNGAGLHTASSCFWDNSTDGSCTVRWENKTMFCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. TrEMBL
Match: A0A1X7UZ29 (Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.342e-27
Identity = 46/103 (44.66%), Postives = 69/103 (66.99%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV +EV  I K  + ++L + TY    V+QW++ +V+QC+ QL KL K ++YIVNC++ Q   AGLH+A  CYWD   DG CTIK+ N  + C++ ++G+A
Sbjct:   36 TTFVVEEVAAIVKDAVENVLGTVTYQHNKVNQWTSNVVEQCLNQLTKLAKPFKYIVNCVVMQKTGAGLHTAMSCYWDNNTDGSCTIKWENKSMYCIVTVFGLA 138
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Cavefish
Match: dynlt3 (dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:103026579])

HSP 1 Score: 101.293 bits (251), Expect = 1.248e-27
Identity = 42/101 (41.58%), Postives = 66/101 (65.35%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            F PDE     K+CI  ++    Y++  V+QW+A IV+  + QLVK  K ++YIVNC + Q + AGLH+A+ CYWD T DG CT+++ N  + C++ ++ +A
Sbjct:   12 FNPDEASNAVKECIEGVIGGVDYSQNKVNQWTATIVEHSLTQLVKQGKPFKYIVNCAVMQKSGAGLHTANSCYWDTTTDGSCTVRWENRTMYCVVSVFAVA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Cavefish
Match: napepld (N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:103040918])

HSP 1 Score: 100.523 bits (249), Expect = 1.286e-24
Identity = 43/103 (41.75%), Postives = 66/103 (64.08%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ +   +   +Y +  V QW+  +V+QC+ QL KL K ++YIV C+I Q N AGL +A  C+WD T DG CT+++ N  + C++ ++G+A
Sbjct:  352 TAFVVDEVSTIVKEAVEGAIGENSYQQSRVKQWTNNVVEQCLSQLNKLGKPFKYIVTCIIMQKNGAGLQTACSCFWDNTTDGSCTVRWENKSMYCIVSVFGLA 454
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Cavefish
Match: napepld (N-acyl phosphatidylethanolamine phospholipase D [Source:NCBI gene;Acc:103040918])

HSP 1 Score: 82.4185 bits (202), Expect = 3.397e-18
Identity = 44/112 (39.29%), Postives = 63/112 (56.25%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA*PDLLFLRK 433
            T FV DEV  I K+ +   +   +Y +  V QW+  +V+QC+ QL KL K ++YIV C+I Q N AGL +A  C+WD T DG      T +  L   +IY +   +LL  +K
Sbjct:  352 TAFVVDEVSTIVKEAVEGAIGENSYQQSRVKQWTNNVVEQCLSQLNKLGKPFKYIVTCIIMQKNGAGLQTACSCFWDNTTDG------TPDTTLLGYFIYKMYFKNLLVQKK 457
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Cavefish
Match: tctex1d2 (Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-081104-219])

HSP 1 Score: 46.2098 bits (108), Expect = 2.486e-6
Identity = 23/101 (22.77%), Postives = 47/101 (46.53%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLP-KSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGI 403
            F P  V    ++ + + L   +Y+    ++ +  +  +   +L +L    Y+ +V  +I +    G+  AS C+WD   D C    Y N+ + C+  ++GI
Sbjct:   42 FRPAVVSSCIRELVREQLGGESYDSERSAETAQTLSKRITDRLKELGLDRYKLVVQVVIGEQRGEGVQMASRCFWDADTDSCAKDVYMNDSLFCVAAVFGI 142
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Sea Lamprey
Match: si:dkey-148f10.4 (dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9])

HSP 1 Score: 104.375 bits (259), Expect = 1.441e-29
Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            FV DEV  I K+ +   +    Y    V+QW++ +V+QC+ QL KL K ++YIV C+I Q N AGLH+AS C+WD + DG CT+++ N  + C++ ++G+A
Sbjct:   12 FVVDEVSNIIKESVESAIGGNAYQHNKVNQWTSTVVEQCLNQLAKLNKPFKYIVTCVIMQKNGAGLHTASSCFWDNSTDGSCTVRWENKSMYCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Nematostella
Match: EDO39601 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9M2])

HSP 1 Score: 105.531 bits (262), Expect = 1.092e-29
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW++ +V+QC+ QL KL K ++YIV C+I Q N AGLH++S CYWD T DG CT+++ N  + C++ ++G+A
Sbjct:   10 TSFVVDEVSNIIKEGIEGAIGGNAYQHNKVNQWTSNVVEQCLNQLTKLGKPFKYIVTCVIMQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Nematostella
Match: EDO27866 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9M2])

HSP 1 Score: 105.531 bits (262), Expect = 1.092e-29
Identity = 46/103 (44.66%), Postives = 68/103 (66.02%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   +    Y    V+QW++ +V+QC+ QL KL K ++YIV C+I Q N AGLH++S CYWD T DG CT+++ N  + C++ ++G+A
Sbjct:   10 TSFVVDEVSNIIKEGIEGAIGGNAYQHNKVNQWTSNVVEQCLNQLTKLGKPFKYIVTCVIMQKNGAGLHTSSSCYWDNTTDGSCTVRWENKTMYCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Medaka
Match: DYNLT3 (dynein light chain Tctex-type 3 [Source:NCBI gene;Acc:101155554])

HSP 1 Score: 96.2857 bits (238), Expect = 1.009e-25
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 2 
Query:  101 VFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            +F  DE   + K+CI  ++  A Y+   V+QW+A IV+  +  LVK  +++++IVNC I Q + AGLH+A+ CYWD T DG CT+++ N  + C++ ++ +A
Sbjct:   11 LFNTDENSALVKECIEGVIGGADYDHSKVNQWTAGIVENSLTHLVKQGRAFKFIVNCAIMQKSGAGLHTANSCYWDTTTDGSCTVRWENRTMYCIVSVFAVA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Medaka
Match: dynlt3 (dynein light chain Tctex-type 1 [Source:NCBI gene;Acc:101158002])

HSP 1 Score: 86.6557 bits (213), Expect = 7.299e-22
Identity = 39/99 (39.39%), Postives = 60/99 (60.61%), Query Frame = 2 
Query:   86 YKKMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILC 382
            +K    F  +E   I K+CI +++    Y+   V++W+A IV++C+ QLVK  K Y+YIV C + Q   AGLH+A+ CYWD   DG  T+++ N  + C
Sbjct:    6 FKIQGSFNSEETDGIVKECIENVVGGDDYSANLVNKWTAGIVERCLTQLVKQGKPYKYIVTCAVMQKTGAGLHTANSCYWDTAMDGSTTVRWENRTMYC 104
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Medaka
Match: dynlt3 (dynein light chain Tctex-type 1 [Source:NCBI gene;Acc:101158002])

HSP 1 Score: 83.1889 bits (204), Expect = 1.228e-20
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 2 
Query:  107 VPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILC 382
            V      ++ KCI +++    Y+   V++W+A IV++C+ QLVK  K Y+YIV C + Q   AGLH+A+ CYWD   DG  T+++ N  + C
Sbjct:   10 VSHNTASVSMKCIENVVGGDDYSANLVNKWTAGIVERCLTQLVKQGKPYKYIVTCAVMQKTGAGLHTANSCYWDTAMDGSTTVRWENRTMYC 101
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Planmine SMEST
Match: SMESG000078291.1 (SMESG000078291.1)

HSP 1 Score: 251.906 bits (642), Expect = 5.826e-87
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 2 
Query:   41 MSFEITAIDAPKAAGYKKMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            MSFEITAIDAPKAAGYKKMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA
Sbjct:    1 MSFEITAIDAPKAAGYKKMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 122
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Planmine SMEST
Match: SMESG000026631.1 (SMESG000026631.1)

HSP 1 Score: 109.383 bits (272), Expect = 7.506e-31
Identity = 47/103 (45.63%), Postives = 71/103 (68.93%), Query Frame = 2 
Query:   98 TVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            T FV DEV  I K+ I   + ++TY    V+QW++ I++Q + QL KL K ++YIV+C+I Q N AGLH+AS CYWD + DG CT+K+ N  + C++ ++G+A
Sbjct:   10 TTFVVDEVTNIVKESIESAIGTSTYVHNKVNQWTSTIIEQSLNQLTKLNKPFKYIVSCVIMQKNGAGLHTASSCYWDNSTDGSCTVKWENKSMYCIVSVFGLA 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Planmine SMEST
Match: SMESG000023166.1 (SMESG000023166.1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.412e-17
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 2 
Query:   92 KMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            K   F  DEV+ I K+ + +IL S  Y    +  W+  I+++ V QL+ L K Y+YI+N  I     AGL+S S  YW+   DG  T+K+ N  + C++ +Y ++
Sbjct:    4 KEASFSQDEVLNILKEIVENILQSNNYIADEIPTWNKNILNKSVEQLINLDKPYKYIINSTIIDKQCAGLNSYSSSYWETLTDGSATLKWENRYLFCIVNVYALS 108
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Planmine SMEST
Match: SMESG000023166.1 (SMESG000023166.1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.701e-17
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 2 
Query:   92 KMTVFVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGIA 406
            K   F  DEV+ I K+ + +IL S  Y    +  W+  I+++ V QL+ L K Y+YI+N  I     AGL+S S  YW+   DG  T+K+ N  + C++ +Y ++
Sbjct:    8 KEASFSQDEVLNILKEIVENILQSNNYIADEIPTWNKNILNKSVEQLINLDKPYKYIINSTIIDKQCAGLNSYSSSYWETLTDGSATLKWENRYLFCIVNVYALS 112
[Close]
BLAST of Dynein light chain Tctex-type 3 vs. Planmine SMEST
Match: SMESG000027829.1 (SMESG000027829.1)

HSP 1 Score: 48.9062 bits (115), Expect = 1.132e-7
Identity = 26/100 (26.00%), Postives = 48/100 (48.00%), Query Frame = 2 
Query:  104 FVPDEVIEIAKKCISDILNSATYNRLFVSQWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETNDGCCTIKYTNNDILCLLYIYGI 403
            F P +   I K+ + + L+  TYN   +S  +  +  + +  LV            +IT+    G+  A+ CYWD  +D C    + NN ++C++ +YG+
Sbjct:   29 FRPLKANIIVKEILKEKLSDITYNAEEISDLTKELSKELMSTLV------------VITEHRAQGIKMATRCYWDSDSDNCMHESFMNNSLICIVSVYGV 116
The following BLAST results are available for this feature:
BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4
Match NameE-valueIdentityDescription
DYNLT12.259e-2741.75dynein light chain Tctex-type 1 [Source:HGNC Symbo... [more]
DYNLT38.647e-2640.59dynein light chain Tctex-type 3 [Source:HGNC Symbo... [more]
DYNLT31.091e-2540.59dynein light chain Tctex-type 3 [Source:HGNC Symbo... [more]
DYNLT34.092e-2341.94dynein light chain Tctex-type 3 [Source:HGNC Symbo... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
dylt-15.523e-824.27DYnein Light chain (Tctex type) [Source:UniProtKB... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Dlc90F2.219e-2234.91gene:FBgn0024432 transcript:FBtr0083575[more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
dynlt11.469e-2942.72dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc... [more]
dynlt11.240e-2742.72dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc... [more]
dynlt32.080e-2741.58dynein, light chain, Tctex-type 3 [Source:ZFIN;Acc... [more]
DYNLT14.531e-2740.78si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-... [more]
si:dkey-148f10.46.130e-2740.78si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3
Match NameE-valueIdentityDescription
tcf73.461e-2641.58transcription factor 7 [Source:Xenbase;Acc:XB-GENE... [more]
DYNLT34.536e-2434.91dynein light chain Tctex-type 3 [Source:NCBI gene;... [more]
tcf71.669e-1740.91transcription factor 7 [Source:Xenbase;Acc:XB-GENE... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Dynlt1f2.191e-2740.78dynein light chain Tctex-type 1F [Source:MGI Symbo... [more]
Dynlt1c2.191e-2740.78dynein light chain Tctex-type 1C [Source:MGI Symbo... [more]
Dynlt1b2.191e-2740.78dynein light chain Tctex-type 1B [Source:MGI Symbo... [more]
Dynlt1a2.191e-2740.78dynein light chain Tctex-type 1A [Source:MGI Symbo... [more]
Dynlt32.616e-2641.58dynein light chain Tctex-type 3 [Source:MGI Symbol... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9Z336|DYLT1_RAT1.017e-2641.75Dynein light chain Tctex-type 1 OS=Rattus norvegic... [more]
sp|P63172|DYLT1_HUMAN1.085e-2641.75Dynein light chain Tctex-type 1 OS=Homo sapiens OX... [more]
sp|P63171|DYLT1_BOVIN1.085e-2641.75Dynein light chain Tctex-type 1 OS=Bos taurus OX=9... [more]
sp|P51807|DYLT1_MOUSE1.532e-2640.78Dynein light chain Tctex-type 1 OS=Mus musculus OX... [more]
sp|Q6XXL8|DYLT3_SHEEP4.752e-2642.57Dynein light chain Tctex-type 3 OS=Ovis aries OX=9... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
C1LDZ24.328e-2843.69Dynein light chain Tctex-type 1 (T-complex testis-... [more]
G4VSR36.822e-2845.63T-complex-associated-testis-expressed 1-related OS... [more]
V3ZR431.658e-2746.60Uncharacterized protein OS=Lottia gigantea OX=2251... [more]
A0A0B6Z9T43.775e-2742.72Uncharacterized protein OS=Arion vulgaris OX=10286... [more]
A0A1X7UZ294.342e-2744.66Uncharacterized protein OS=Amphimedon queenslandic... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 4
Match NameE-valueIdentityDescription
dynlt31.248e-2741.58dynein light chain Tctex-type 3 [Source:NCBI gene;... [more]
napepld1.286e-2441.75N-acyl phosphatidylethanolamine phospholipase D [S... [more]
napepld3.397e-1839.29N-acyl phosphatidylethanolamine phospholipase D [S... [more]
tctex1d22.486e-622.77Tctex1 domain containing 2 [Source:ZFIN;Acc:ZDB-GE... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
si:dkey-148f10.41.441e-2942.57dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO396011.092e-2944.66Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO278661.092e-2944.66Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3
Match NameE-valueIdentityDescription
DYNLT31.009e-2539.22dynein light chain Tctex-type 3 [Source:NCBI gene;... [more]
dynlt37.299e-2239.39dynein light chain Tctex-type 1 [Source:NCBI gene;... [more]
dynlt31.228e-2039.13dynein light chain Tctex-type 1 [Source:NCBI gene;... [more]
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BLAST of Dynein light chain Tctex-type 3 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000078291.15.826e-87100.00SMESG000078291.1[more]
SMESG000026631.17.506e-3145.63SMESG000026631.1[more]
SMESG000023166.12.412e-1735.24SMESG000023166.1[more]
SMESG000023166.12.701e-1735.24SMESG000023166.1[more]
SMESG000027829.11.132e-726.00SMESG000027829.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30025580 ID=SMED30025580|Name=Dynein light chain Tctex-type 3|organism=Schmidtea mediterranea sexual|type=transcript|length=594bp
AGTTTAAGTTATACAATTTTTTACATTGCTACCTGGAAGTATGTCTTTTG
AAATTACTGCCATCGACGCACCGAAAGCGGCGGGTTACAAGAAAATGACA
GTTTTCGTGCCTGATGAAGTCATTGAAATAGCTAAAAAGTGTATTTCTGA
TATATTGAACAGCGCAACATACAACCGTTTATTCGTGTCCCAGTGGTCCG
CAGTTATAGTTGATCAATGTGTTGGACAATTGGTTAAGTTACCAAAATCT
TATCGTTATATTGTAAACTGCCTCATCACCCAGGACAACGAAGCAGGGCT
GCATTCTGCCAGTGTGTGTTATTGGGATGAAACAAATGACGGATGCTGTA
CAATCAAATATACAAATAATGATATTCTGTGTCTTTTGTACATTTATGGA
ATTGCATAGCCAGATTTATTATTTCTTCGAAAGATAGATTTATAAATTTT
ACGTGTTATATCTATTTTGGTTTTCATACACAAAAATTTATTGAATTTTT
TTTATTAATTTTATAATTGGTTGAAGTTCAATTTATTTTTAAAGCATTTA
TTTAACAAATTTTTCATTTCAATTCGGAATCGATTTTGTAATTG
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protein sequence of SMED30025580-orf-1

>SMED30025580-orf-1 ID=SMED30025580-orf-1|Name=SMED30025580-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=123bp
MSFEITAIDAPKAAGYKKMTVFVPDEVIEIAKKCISDILNSATYNRLFVS
QWSAVIVDQCVGQLVKLPKSYRYIVNCLITQDNEAGLHSASVCYWDETND
GCCTIKYTNNDILCLLYIYGIA*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000418head
PLANA:0000419prepharyngeal region
PLANA:0000420parapharyngeal region
PLANA:0003117parapharyngeal cell
Vocabulary: INTERPRO
TermDefinition
IPR005334Tctex-1-like
Vocabulary: cellular component
TermDefinition
GO:0000775chromosome, centromeric region
GO:0000776kinetochore
GO:0000777condensed chromosome kinetochore
GO:0005634nucleus
GO:0005694chromosome
GO:0005737cytoplasm
GO:0005856cytoskeleton
GO:0005868cytoplasmic dynein complex
GO:0005874microtubule
GO:0030286dynein complex
Vocabulary: molecular function
TermDefinition
GO:0003774motor activity
Vocabulary: biological process
TermDefinition
GO:0006810transport
GO:0007049cell cycle
GO:0007067mitotic nuclear division
GO:0007346regulation of mitotic cell cycle
GO:0051301cell division