Biorientation of chromosomes in cell division protein 1-like protein

Overview


Name	Biorientation of chromosomes in cell division protein 1-like protein
Smed ID	SMED30025479
Length (bp)	2477

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Biorientation of chromosomes in cell division protein 1-like protein (SMED30025479) t-SNE clustered cells

Violin plots show distribution of expression levels for Biorientation of chromosomes in cell division protein 1-like protein (SMED30025479) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Biorientation of chromosomes in cell division protein 1-like protein (SMED30025479) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30025479

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30025479	h1SMcG0018725	SmedASXL_015765	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
X2 cell	SMED30025479	h1SMcG0018725	SmedASXL_015765	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
muscle cell	SMED30025479	h1SMcG0018725	dd_Smed_v4_7187_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Human
Match: BOD1 (biorientation of chromosomes in cell division 1 [Source:HGNC Symbol;Acc:HGNC:25114])

HSP 1 Score: 75.485 bits (184), Expect = 5.941e-15
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    E+L
Sbjct:   43 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFL 157

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Human
Match: BOD1L1 (biorientation of chromosomes in cell division 1 like 1 [Source:HGNC Symbol;Acc:HGNC:31792])

HSP 1 Score: 73.9442 bits (180), Expect = 1.105e-12
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            +V  ++  LK+QG FD  R+  L+++  K  YQNL  +V+N     L T  W P + K+QLR  +R  +  +    + I R+I Q V+ KI    +P +E    E+L
Sbjct:   53 LVAMIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFL 159

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Human
Match: BOD1 (biorientation of chromosomes in cell division 1 [Source:HGNC Symbol;Acc:HGNC:25114])

HSP 1 Score: 59.6918 bits (143), Expect = 5.026e-10
Identity = 29/75 (38.67%), Postives = 46/75 (61.33%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLR 293
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR
Sbjct:   43 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLR 116

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Human
Match: BOD1L2 (biorientation of chromosomes in cell division 1 like 2 [Source:HGNC Symbol;Acc:HGNC:28505])

HSP 1 Score: 59.3066 bits (142), Expect = 1.532e-9
Identity = 33/116 (28.45%), Postives = 58/116 (50.00%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++ +LK++G FD+ R+   +++  K  YQNL  K +N  +  L+   W P    +QL + LR  +  + +    + R+  Q V+ K+    +P IE    E+L
Sbjct:   30 SLPPGDPQLIAI-IVGQLKSRGLFDSFRRDCKADVDTKPAYQNLSQKADNFVSTHLDKQEWNPPANDNQLHDGLRQSVVQSGRSEAGVDRISSQVVDPKLNHIFRPQIEQIIHEFL 144

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
Match: BOD1 (gene:FBgn0039560 transcript:FBtr0301143)

HSP 1 Score: 75.485 bits (184), Expect = 1.688e-13
Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 3

Query:   99 VEELLEKLKAQGCFDAKR-KQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++ L+ ++K+QG FD  R    L+++  K  YQN+ T+VE     FL   +W P   K QLRE+LR H+  +D  +  + ++++Q VN K+    +P IES   +YL +
Sbjct:    5 IKTLIAEVKSQGVFDEFRFNCCLADVDTKPAYQNVRTQVETAVNDFLAKQQWTPETNKVQLRERLRKHLMDSDVLDKGVDQIVDQVVNPKVATIFEPKIESIVYKYLGI 113

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
Match: BOD1 (gene:FBgn0039560 transcript:FBtr0085252)

HSP 1 Score: 75.485 bits (184), Expect = 1.688e-13
Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 3

Query:   99 VEELLEKLKAQGCFDAKR-KQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++ L+ ++K+QG FD  R    L+++  K  YQN+ T+VE     FL   +W P   K QLRE+LR H+  +D  +  + ++++Q VN K+    +P IES   +YL +
Sbjct:    5 IKTLIAEVKSQGVFDEFRFNCCLADVDTKPAYQNVRTQVETAVNDFLAKQQWTPETNKVQLRERLRKHLMDSDVLDKGVDQIVDQVVNPKVATIFEPKIESIVYKYLGI 113

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
Match: BOD1 (gene:FBgn0039560 transcript:FBtr0335013)

HSP 1 Score: 75.485 bits (184), Expect = 1.786e-13
Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 3

Query:   99 VEELLEKLKAQGCFDAKR-KQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++ L+ ++K+QG FD  R    L+++  K  YQN+ T+VE     FL   +W P   K QLRE+LR H+  +D  +  + ++++Q VN K+    +P IES   +YL +
Sbjct:    5 IKTLIAEVKSQGVFDEFRFNCCLADVDTKPAYQNVRTQVETAVNDFLAKQQWTPETNKVQLRERLRKHLMDSDVLDKGVDQIVDQVVNPKVATIFEPKIESIVYKYLGI 113

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
Match: BOD1 (gene:FBgn0039560 transcript:FBtr0085253)

HSP 1 Score: 75.0998 bits (183), Expect = 1.895e-13
Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 3

Query:   99 VEELLEKLKAQGCFDAKR-KQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++ L+ ++K+QG FD  R    L+++  K  YQN+ T+VE     FL   +W P   K QLRE+LR H+  +D  +  + ++++Q VN K+    +P IES   +YL +
Sbjct:    5 IKTLIAEVKSQGVFDEFRFNCCLADVDTKPAYQNVRTQVETAVNDFLAKQQWTPETNKVQLRERLRKHLMDSDVLDKGVDQIVDQVVNPKVATIFEPKIESIVYKYLGI 113

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
Match: BOD1 (gene:FBgn0039560 transcript:FBtr0335012)

HSP 1 Score: 75.0998 bits (183), Expect = 1.895e-13
Identity = 38/109 (34.86%), Postives = 63/109 (57.80%), Query Frame = 3

Query:   99 VEELLEKLKAQGCFDAKR-KQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++ L+ ++K+QG FD  R    L+++  K  YQN+ T+VE     FL   +W P   K QLRE+LR H+  +D  +  + ++++Q VN K+    +P IES   +YL +
Sbjct:    5 IKTLIAEVKSQGVFDEFRFNCCLADVDTKPAYQNVRTQVETAVNDFLAKQQWTPETNKVQLRERLRKHLMDSDVLDKGVDQIVDQVVNPKVATIFEPKIESIVYKYLGI 113

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Zebrafish
Match: bod1 (biorientation of chromosomes in cell division 1 [Source:ZFIN;Acc:ZDB-GENE-060810-163])

HSP 1 Score: 70.8626 bits (172), Expect = 8.251e-14
Identity = 34/109 (31.19%), Postives = 60/109 (55.05%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++  ++E LK +G FD  R+  L+++  K  YQNL  +V    +  L T  W P++ K+Q+R  LR  +  +    + + R+I Q V  K+Q   +P+IE+   E+L+ 
Sbjct:   21 LIALIVEHLKNKGHFDEFRRDCLADVDTKPGYQNLQQRVGTYVSTHLSTQEWNPTINKNQVRNALRQSVIQSGMLESGVDRIISQVVEPKLQHIFRPIIENAIHEFLDA 129

[Close]

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEV 422
            ++  ++E LK +G FD  R+  L+++  K  YQNL  +V    +  L T  W P++ K+Q+R  LR  +  +    + + R+I Q V  K+Q   +P+IE+   E+L+ 
Sbjct:   21 LIALIVEHLKNKGHFDEFRRDCLADVDTKPGYQNLQQRVGTYVSTHLSTQEWNPTINKNQVRNALRQSVIQSGMLESGVDRIISQVVEPKLQHIFRPIIENAIHEFLDA 129

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Zebrafish
Match: bod1l1 (biorientation of chromosomes in cell division 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-111028-1])

HSP 1 Score: 60.4622 bits (145), Expect = 8.629e-9
Identity = 28/100 (28.00%), Postives = 52/100 (52.00%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIE 395
            +V  ++  LK +G FD  R+  L+++  K  Y +L  +V+N  +  L    W P + K+QLR  +R  +Q +      + R++ Q V+ K+    +P +E
Sbjct:   11 LVSVIVNHLKTEGLFDQFRRDCLADVDTKPAYLHLRQRVDNFVSNHLANHTWSPQLNKNQLRNSIRQLVQQSGMLEQGVDRIVAQVVDPKVHHTFRPQVE 110

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Xenopus
Match: rab12 (RAB12, member RAS oncogene family [Source:Xenbase;Acc:XB-GENE-492791])

HSP 1 Score: 70.8626 bits (172), Expect = 1.554e-13
Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD  R+  L+++  K  YQNL  KV+N  +  L+   W   + K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    EYL
Sbjct:   23 SLAPGDSQLIAL-IVEQLKSRGQFDGFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNADMNKNQLRNGLRQSVIQSGMLEAGVDRIISQVVDPKLNHIFRPQIEKAIQEYL 137

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Xenopus
Match: BOD1L1 (biorientation of chromosomes in cell division 1-like 1 [Source:NCBI gene;Acc:100127583])

HSP 1 Score: 76.2554 bits (186), Expect = 1.842e-13
Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMMTQIYEKLRSES 485
            +V +++  LK+QG FD  R+  L+++  K  YQNL  +V+N     L +  W P + K+QLR  +R  +  +    + I R+I Q V+ KI    +P +E    EYL +   +   N+ T+  E+ RSE+
Sbjct:   11 LVSQIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVASHLASHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIISQVVDPKINHLFRPQVEKVVKEYLAMMNNKEDGNVNTEQNEE-RSEA 139

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Xenopus
Match: BOD1L1 (biorientation of chromosomes in cell division 1-like 1 [Source:NCBI gene;Acc:100127583])

HSP 1 Score: 76.2554 bits (186), Expect = 1.907e-13
Identity = 42/130 (32.31%), Postives = 70/130 (53.85%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMMTQIYEKLRSES 485
            +V +++  LK+QG FD  R+  L+++  K  YQNL  +V+N     L +  W P + K+QLR  +R  +  +    + I R+I Q V+ KI    +P +E    EYL +   +   N+ T+  E+ RSE+
Sbjct:   11 LVSQIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVASHLASHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIISQVVDPKINHLFRPQVEKVVKEYLAMMNNKEDGNVNTEQNEE-RSEA 139

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Mouse
Match: Bod1 (biorientation of chromosomes in cell division 1 [Source:MGI Symbol;Acc:MGI:1916806])

HSP 1 Score: 75.0998 bits (183), Expect = 3.870e-15
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    E+L
Sbjct:   31 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPAMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFL 145

[Close]

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    E+L
Sbjct:   31 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPAMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFL 145

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Mouse
Match: Bod1l (biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804])

HSP 1 Score: 72.7886 bits (177), Expect = 1.960e-12
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            +V  ++  LK+QG FD  R+  L+++  K  YQNL  +V+N     L T  W P + K+QLR  +R  +  +    + I R+I Q V+ KI    +P +E    E+L
Sbjct:   51 LVAMIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFL 157

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Mouse
Match: Bod1l (biorientation of chromosomes in cell division 1-like [Source:MGI Symbol;Acc:MGI:2444804])

HSP 1 Score: 72.7886 bits (177), Expect = 2.025e-12
Identity = 36/107 (33.64%), Postives = 57/107 (53.27%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            +V  ++  LK+QG FD  R+  L+++  K  YQNL  +V+N     L T  W P + K+QLR  +R  +  +    + I R+I Q V+ KI    +P +E    E+L
Sbjct:   51 LVAMIVNHLKSQGLFDQFRRDCLADVDTKPAYQNLRQRVDNFVANHLATHTWSPHLNKNQLRNNIRQQVLKSGMLESGIDRIISQVVDPKINHTFRPQVEKAVHEFL 157

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
Match: sp|Q6AYJ2|BOD1_RAT (Biorientation of chromosomes in cell division protein 1 OS=Rattus norvegicus OX=10116 GN=Bod1 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.507e-14
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    E+L
Sbjct:   31 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPAMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFL 145

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
Match: sp|Q5SQY2|BOD1_MOUSE (Biorientation of chromosomes in cell division protein 1 OS=Mus musculus OX=10090 GN=Bod1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.707e-14
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    E+L
Sbjct:   31 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPAMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFL 145

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
Match: sp|Q96IK1|BOD1_HUMAN (Biorientation of chromosomes in cell division protein 1 OS=Homo sapiens OX=9606 GN=BOD1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.853e-14
Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD+ R+  L+++  K  YQNL  KV+N  +  L+   W P++ K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    E+L
Sbjct:   43 SLPPGDPQLIAL-IVEQLKSRGLFDSFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNPTMNKNQLRNGLRQSVVQSGMLEAGVDRIISQVVDPKLNHIFRPQIERAIHEFL 157

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
Match: sp|Q6DFL2|BOD1_XENLA (Biorientation of chromosomes in cell division protein 1 OS=Xenopus laevis OX=8355 GN=bod1 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.660e-13
Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD  R+  L+++  K  YQNL  KV+N  +  L+   W   + K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    EYL
Sbjct:   23 SLAPGDSQLIAL-IVEQLKSRGQFDGFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNADMNKNQLRNGLRQSVIQSGMLEAGVDRIISQVVDPKLNHIFRPQIEKAIHEYL 137

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
Match: sp|Q68FB1|BOD1_XENTR (Biorientation of chromosomes in cell division protein 1 OS=Xenopus tropicalis OX=8364 GN=bod1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.232e-13
Identity = 39/116 (33.62%), Postives = 61/116 (52.59%), Query Frame = 3

Query:   69 SLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            SL   D  +I   ++E+LK++G FD  R+  L+++  K  YQNL  KV+N  +  L+   W   + K+QLR  LR  +  +      + R+I Q V+ K+    +P IE    EYL
Sbjct:   23 SLAPGDSQLIAL-IVEQLKSRGQFDGFRRDCLADVDTKPAYQNLRQKVDNFVSTHLDKQEWNADMNKNQLRNGLRQSVIQSGMLEAGVDRIISQVVDPKLNHIFRPQIEKAIQEYL 137

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
Match: T1FXM7 (Uncharacterized protein OS=Helobdella robusta OX=6412 GN=20213575 PE=4 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.342e-20
Identity = 47/113 (41.59%), Postives = 68/113 (60.18%), Query Frame = 3

Query:   99 VEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERW 437
            V E++ KLK QG FD  RK+ L+++  K  YQNL T+V    +++L TV+W   + K+QLRE LR H+         I R+++Q V  KI   LKP I+   CE+L +NY+ W
Sbjct:    7 VIEVVNKLKKQGLFDQFRKECLADVDTKPAYQNLQTRVTGEVSRYLSTVKWKQDINKNQLREHLRRHLNELPMLTAGIERVVDQVVKPKIFQSLKPQIDKVVCEHLNINYDAW 119

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
Match: A0A1S3HWA3 (biorientation of chromosomes in cell division protein 1-like 1 OS=Lingula unguis OX=7574 GN=LOC106158726 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.111e-18
Identity = 47/110 (42.73%), Postives = 70/110 (63.64%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVN 425
            I EE+++KLK+QG FD  RK+ L+++  K  YQNL  +V+N  T FL   +W P + K+QLREQLR  I  +    + + R+IEQ VN KI+   KP ++   CE+L ++
Sbjct:   15 ITEEIVKKLKSQGIFDQFRKECLADVDTKPAYQNLRQRVDNYVTNFLSKQKWSPDLNKNQLREQLRRQINQSGMLASGVERIIEQVVNPKIETVFKPEVDKVVCEFLGID 124

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
Match: A0A2R2MRJ6 (biorientation of chromosomes in cell division protein 1-like 1 OS=Lingula unguis OX=7574 GN=LOC112042385 PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-18
Identity = 47/110 (42.73%), Postives = 70/110 (63.64%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVN 425
            I EE+++KLK+QG FD  RK+ L+++  K  YQNL  +V+N  T FL   +W P + K+QLREQLR  I  +    + + R+IEQ VN KI+   KP ++   CE+L ++
Sbjct:   15 ITEEIVKKLKSQGIFDQFRKECLADVDTKPAYQNLRQRVDNYVTNFLSKQKWSPDLNKNQLREQLRRQINQSGMLASGVERIIEQVVNPKIETVFKPEVDKVVCEFLGID 124

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
Match: A0A0L8HJ56 (Uncharacterized protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22013392mg PE=4 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.537e-18
Identity = 46/119 (38.66%), Postives = 79/119 (66.39%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMM 452
            +V+E+++KLK+QG FD  RK+ + ++  K  YQNL  ++E   ++FLE   W P++ K+QLR+QLR HI  +    + + R+IEQ VN KI   +KP I+   CE+LE++++  ++ ++
Sbjct:   15 LVQEIIDKLKSQGLFDQFRKEGMGDVDTKPAYQNLRQRMEGHVSRFLEKQVWSPNLNKNQLRDQLRKHINQSGILASGVERIIEQVVNPKIFLVIKPRIDEVICEHLEIDFKERQEKLL 133

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
Match: A0A0L8HJ60 (Uncharacterized protein OS=Octopus bimaculoides OX=37653 GN=OCBIM_22013392mg PE=4 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.721e-18
Identity = 46/119 (38.66%), Postives = 79/119 (66.39%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMM 452
            +V+E+++KLK+QG FD  RK+ + ++  K  YQNL  ++E   ++FLE   W P++ K+QLR+QLR HI  +    + + R+IEQ VN KI   +KP I+   CE+LE++++  ++ ++
Sbjct:   15 LVQEIIDKLKSQGLFDQFRKEGMGDVDTKPAYQNLRQRMEGHVSRFLEKQVWSPNLNKNQLRDQLRKHINQSGILASGVERIIEQVVNPKIFLVIKPRIDEVICEHLEIDFKERQEKLL 133

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Cavefish
Match: bod1 (biorientation of chromosomes in cell division 1 [Source:ZFIN;Acc:ZDB-GENE-060810-163])

HSP 1 Score: 75.8702 bits (185), Expect = 1.033e-15
Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLE 419
            ++  ++E LK +G FD  R+  L+++  K  YQNL  KV+N     L +  W PS+ K+Q+R  LR  +  +    + + R+I Q V+ K+    +P IE+   E+LE
Sbjct:   18 LIALIVEHLKNRGLFDEFRRDCLADVDTKPAYQNLRQKVDNFVATHLSSQEWSPSINKNQVRNGLRQSVVQSGMLESGVDRIITQVVDPKLNHIFRPHIETAIHEFLE 125

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Cavefish
Match: ENSAMXT00000033971.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02001246.1:99026:102977:1 gene:ENSAMXG00000043479.1 transcript:ENSAMXT00000033971.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 63.1586 bits (152), Expect = 2.332e-11
Identity = 30/107 (28.04%), Postives = 54/107 (50.47%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            +V  ++  LK QG FD  R+  L+++  K  Y +L  +V+N  +  L    W P + K+QLR  +R  +  +      + R++ Q V+ KI    +P +E    ++L
Sbjct:   17 MVAMIVNHLKTQGLFDQFRRDCLADVDTKPAYLHLRQRVDNFVSNHLSNHTWSPQLNKNQLRNSIRQLVLQSGMLEQGVDRIVAQVVDPKIHHIFRPQVERVVRQFL 123

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Sea Lamprey
Match: bod1 (biorientation of chromosomes in cell division 1 [Source:ZFIN;Acc:ZDB-GENE-060810-163])

HSP 1 Score: 52.373 bits (124), Expect = 1.288e-8
Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 3

Query:  180 KSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYE 431
            +  YQNL  ++++  +  L    W P + K+Q+R  LR  I  +    + ++R++ Q VN KI    +P IE+   EYL V+ E
Sbjct:    1 QPAYQNLRERMDSFVSNHLGHQNWTPDINKNQMRNGLRQTILQSGMLESAVNRIVHQVVNPKISTFFRPQIENVVHEYLGVDEE 84

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BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Medaka
Match: bod1 (biorientation of chromosomes in cell division protein 1 [Source:NCBI gene;Acc:101155373])

HSP 1 Score: 73.1738 bits (178), Expect = 1.141e-14
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            ++  ++E LK +G FD  R+  L+++  K  YQNL  KV+N  T  L T  W PS  K+Q+R  LR  +  +    + + R+I Q V+ K+    +P IE+   ++L
Sbjct:   20 LIGMIVEHLKNRGLFDEFRRDCLADVDTKPAYQNLRQKVDNFVTSHLSTQEWNPSNNKNQMRNGLRQSVVQSGMLESGVDRIITQVVDPKMNHIFRPQIETAIHDFL 126

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Medaka
Match: bod1 (biorientation of chromosomes in cell division protein 1 [Source:NCBI gene;Acc:101155373])

HSP 1 Score: 73.1738 bits (178), Expect = 1.295e-14
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            ++  ++E LK +G FD  R+  L+++  K  YQNL  KV+N  T  L T  W PS  K+Q+R  LR  +  +    + + R+I Q V+ K+    +P IE+   ++L
Sbjct:   27 LIGMIVEHLKNRGLFDEFRRDCLADVDTKPAYQNLRQKVDNFVTSHLSTQEWNPSNNKNQMRNGLRQSVVQSGMLESGVDRIITQVVDPKMNHIFRPQIETAIHDFL 133

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Medaka
Match: ENSORLT00000000722.2 (pep primary_assembly:ASM223467v1:10:6657496:6658174:1 gene:ENSORLG00000000588.2 transcript:ENSORLT00000000722.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 67.0106 bits (162), Expect = 1.622e-12
Identity = 32/107 (29.91%), Postives = 55/107 (51.40%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            +V  ++  LK QG FD  R++ L+++  K  Y NL  +V+N  +  L    W P + K+QLR  +R  +  +      + R++ Q V+ KI    +P +E    E+L
Sbjct:   11 LVSMIVNHLKTQGLFDQFRRECLADVDTKPAYLNLKQRVDNFVSNHLSNHTWSPHLNKNQLRNNIRQLVLQSGMLEQGVDRIVAQVVDPKINHIFRPQVERVVREFL 117

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Medaka
Match: ENSORLT00000040911.1 (pep primary_assembly:ASM223467v1:10:6657496:6660207:1 gene:ENSORLG00000000588.2 transcript:ENSORLT00000040911.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 66.2402 bits (160), Expect = 2.717e-12
Identity = 32/107 (29.91%), Postives = 55/107 (51.40%), Query Frame = 3

Query:   96 IVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYL 416
            +V  ++  LK QG FD  R++ L+++  K  Y NL  +V+N  +  L    W P + K+QLR  +R  +  +      + R++ Q V+ KI    +P +E    E+L
Sbjct:   11 LVSMIVNHLKTQGLFDQFRRECLADVDTKPAYLNLKQRVDNFVSNHLSNHTWSPHLNKNQLRNNIRQLVLQSGMLEQGVDRIVAQVVDPKINHIFRPQVERVVREFL 117

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Planmine SMEST
Match: SMESG000026008.1 (SMESG000026008.1)

HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0
Identity = 474/479 (98.96%), Postives = 477/479 (99.58%), Query Frame = 3

Query:  954 TEDYVPKFYDGSVNLEKVKIGLLKTPDKPIEKSMEKIFSPKKMIWGQLVLAIQDIXXXXXXXXXXRHEHERKRYSRKSPLPPRNHSAIRDGSTKAYDEPPRHLEIRQSDYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXENPIRSHQKSNDYTDVSSESFNELELKDNQVAVNNANNTKKQTRXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXXXQKTPNLTRXXXXXXXXXXXXXXXXXXXXQRNQSQNNFGNYDKSYRVFGHSQSEDKDMDISVGTQSPSVDTKWDSPVAEINLDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVXXXXXXXXXXXXXXXXXXXXXXXXQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNVPLETISTEDLEKTKHDXXXXXXXXXXXXRAGSIKRENNLCCEEIQTFTVNDEIEIKKDSSVKEEVQEMVDIDHSNTLSSPNNE 2390
            TEDYVPKFYDG+VNLEKVKIGLLKTPDKPIEKSMEKIFSPKKMIWGQLVLAIQDISDDSAASDSDRHEHERKRYSRKSPL PRNHSAIRDGSTKAYDEPPRH EIRQSDYNRQRRRSRPRETPRQRDPRRDADR+TSRPENPIRSHQKSNDYTDVSSESFNELELKDNQVAVNNANNTKKQTRSSSSEDSHSSNSNDQTLKIIRKINKNKTKLRKKQKTPNLTRSSSSFSSSESSSGSSSSDVSQRNQSQNNFGNYDKSYRVFGHSQSEDKDMDISVGTQSPSVDTKWDSPVAEINLDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVSASNSSSSSSSDSSSENSSSSHSSQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNVPLETISTEDLEKTKHDSEPEEGELSSESRAGSIKRENNLCCEEIQTFTVNDEIEIKKDSSVKEEVQEMVDIDHSNT+SSPNNE
Sbjct:  305 TEDYVPKFYDGNVNLEKVKIGLLKTPDKPIEKSMEKIFSPKKMIWGQLVLAIQDISDDSAASDSDRHEHERKRYSRKSPLAPRNHSAIRDGSTKAYDEPPRHSEIRQSDYNRQRRRSRPRETPRQRDPRRDADRKTSRPENPIRSHQKSNDYTDVSSESFNELELKDNQVAVNNANNTKKQTRSSSSEDSHSSNSNDQTLKIIRKINKNKTKLRKKQKTPNLTRSSSSFSSSESSSGSSSSDVSQRNQSQNNFGNYDKSYRVFGHSQSEDKDMDISVGTQSPSVDTKWDSPVAEINLDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVSASNSSSSSSSDSSSENSSSSHSSQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNVPLETISTEDLEKTKHDSEPEEGELSSESRAGSIKRENNLCCEEIQTFTVNDEIEIKKDSSVKEEVQEMVDIDHSNTVSSPNNE 783

HSP 2 Score: 457.988 bits (1177), Expect = 2.520e-149
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 3

Query:   42 MSHKDYPDYSLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMMTQIYEKLRSESPQEKYSQKEMPSTSIKSEIKQEMSYSQFKSDTESNDAEVTQSNESNIKLSSIKLEQHLXXXXXXXXXXXXXXXAPAMKFSQKSPHSNFVTS 758
            MSHKDYPDYSLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMMTQIYEKLRSESPQEKYSQKEMPSTSIKSEIKQEMSYSQFKSDTESNDAEVTQSNESNIKLSSIKLEQHLNQSNVVNSSNFSTTVAPAMKFSQKSPHSNFVTS
Sbjct:    1 MSHKDYPDYSLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTYQNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRLIEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMMTQIYEKLRSESPQEKYSQKEMPSTSIKSEIKQEMSYSQFKSDTESNDAEVTQSNESNIKLSSIKLEQHLNQSNVVNSSNFSTTVAPAMKFSQKSPHSNFVTS 239

[Close]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Planmine SMEST
Match: SMESG000026008.1 (SMESG000026008.1)

HSP 1 Score: 330.487 bits (846), Expect = 3.293e-108
Identity = 206/207 (99.52%), Postives = 207/207 (100.00%), Query Frame = 3

Query: 1770 MDISVGTQSPSVDTKWDSPVAEINLDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVXXXXXXXXXXXXXXXXXXXXXXXXQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNVPLETISTEDLEKTKHDXXXXXXXXXXXXRAGSIKRENNLCCEEIQTFTVNDEIEIKKDSSVKEEVQEMVDIDHSNTLSSPNNE 2390
            MDISVGTQSPSVDTKWDSPVAEINLDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVSASNSSSSSSSDSSSENSSSSHSSQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNVPLETISTEDLEKTKHDSEPEEGELSSESRAGSIKRENNLCCEEIQTFTVNDEIEIKKDSSVKEEVQEMVDIDHSNT+SSPNNE
Sbjct:    1 MDISVGTQSPSVDTKWDSPVAEINLDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVSASNSSSSSSSDSSSENSSSSHSSQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNVPLETISTEDLEKTKHDSEPEEGELSSESRAGSIKRENNLCCEEIQTFTVNDEIEIKKDSSVKEEVQEMVDIDHSNTVSSPNNE 207

The following BLAST results are available for this feature:

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Human
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Celegans
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Zebrafish
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Xenopus
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Mouse
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Cavefish
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Sea Lamprey
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Yeast
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Nematostella
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Medaka
BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Planmine SMEST

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4


Match Name	E-value	Identity	Description
BOD1	5.941e-15	33.62	biorientation of chromosomes in cell division 1 [S...	[more]
BOD1L1	1.105e-12	33.64	biorientation of chromosomes in cell division 1 li...	[more]
BOD1	5.026e-10	38.67	biorientation of chromosomes in cell division 1 [S...	[more]
BOD1L2	1.532e-9	28.45	biorientation of chromosomes in cell division 1 li...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
BOD1	1.688e-13	34.86	gene:FBgn0039560 transcript:FBtr0301143	[more]
BOD1	1.688e-13	34.86	gene:FBgn0039560 transcript:FBtr0085252	[more]
BOD1	1.786e-13	34.86	gene:FBgn0039560 transcript:FBtr0335013	[more]
BOD1	1.895e-13	34.86	gene:FBgn0039560 transcript:FBtr0085253	[more]
BOD1	1.895e-13	34.86	gene:FBgn0039560 transcript:FBtr0335012	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
bod1	8.251e-14	31.19	biorientation of chromosomes in cell division 1 [S...	[more]
bod1	8.251e-14	31.19	biorientation of chromosomes in cell division 1 [S...	[more]
bod1l1	8.629e-9	28.00	biorientation of chromosomes in cell division 1-li...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 3


Match Name	E-value	Identity	Description
rab12	1.554e-13	33.62	RAB12, member RAS oncogene family [Source:Xenbase;...	[more]
BOD1L1	1.842e-13	32.31	biorientation of chromosomes in cell division 1-li...	[more]
BOD1L1	1.907e-13	32.31	biorientation of chromosomes in cell division 1-li...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 4


Match Name	E-value	Identity	Description
Bod1	3.870e-15	33.62	biorientation of chromosomes in cell division 1 [S...	[more]
Bod1	3.870e-15	33.62	biorientation of chromosomes in cell division 1 [S...	[more]
Bod1l	1.960e-12	33.64	biorientation of chromosomes in cell division 1-li...	[more]
Bod1l	2.025e-12	33.64	biorientation of chromosomes in cell division 1-li...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q6AYJ2\|BOD1_RAT	2.507e-14	33.62	Biorientation of chromosomes in cell division prot...	[more]
sp\|Q5SQY2\|BOD1_MOUSE	2.707e-14	33.62	Biorientation of chromosomes in cell division prot...	[more]
sp\|Q96IK1\|BOD1_HUMAN	2.853e-14	33.62	Biorientation of chromosomes in cell division prot...	[more]
sp\|Q6DFL2\|BOD1_XENLA	5.660e-13	33.62	Biorientation of chromosomes in cell division prot...	[more]
sp\|Q68FB1\|BOD1_XENTR	8.232e-13	33.62	Biorientation of chromosomes in cell division prot...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
T1FXM7	1.342e-20	41.59	Uncharacterized protein OS=Helobdella robusta OX=6...	[more]
A0A1S3HWA3	1.111e-18	42.73	biorientation of chromosomes in cell division prot...	[more]
A0A2R2MRJ6	1.130e-18	42.73	biorientation of chromosomes in cell division prot...	[more]
A0A0L8HJ56	1.537e-18	38.66	Uncharacterized protein OS=Octopus bimaculoides OX...	[more]
A0A0L8HJ60	1.721e-18	38.66	Uncharacterized protein OS=Octopus bimaculoides OX...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
bod1	1.033e-15	33.33	biorientation of chromosomes in cell division 1 [S...	[more]
ENSAMXT00000033971.1	2.332e-11	28.04	pep primary_assembly:Astyanax_mexicanus-2.0:APWO02...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
bod1	1.288e-8	32.14	biorientation of chromosomes in cell division 1 [S...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 4


Match Name	E-value	Identity	Description
bod1	1.141e-14	33.64	biorientation of chromosomes in cell division prot...	[more]
bod1	1.295e-14	33.64	biorientation of chromosomes in cell division prot...	[more]
ENSORLT00000000722.2	1.622e-12	29.91	pep primary_assembly:ASM223467v1:10:6657496:665817...	[more]
ENSORLT00000040911.1	2.717e-12	29.91	pep primary_assembly:ASM223467v1:10:6657496:666020...	[more]

BLAST of Biorientation of chromosomes in cell division protein 1-like protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2


Match Name	E-value	Identity	Description
SMESG000026008.1	2.520e-149	98.96	SMESG000026008.1	[more]
SMESG000026008.1	3.293e-108	99.52	SMESG000026008.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30025479 ID=SMED30025479|Name=Biorientation of chromosomes in cell division protein 1-like protein|organism=Schmidtea mediterranea sexual|type=transcript|length=2477bp
TTCAAATTTTAAATAATCTATTTCTAATCATTATTTAATTAATGTCTCAT
AAAGATTACCCAGATTATTCTTTAAAATCATATGACAAAAGTATTATAGT
TGAAGAACTGTTAGAAAAATTAAAGGCACAAGGTTGCTTTGATGCTAAAC
GTAAACAGTTTTTATCTGAAATTACAAATAAATCAACTTATCAAAATTTG
CATACAAAAGTTGAAAATTTAGCAACTAAGTTCTTAGAAACGGTAAGATG
GCCTCCATCAGTTCAAAAACATCAATTAAGAGAACAATTAAGACTACATA
TACAATCTACTGATCAATTCAATAATTGTATCAGCCGATTAATTGAACAA
GAAGTTAATTGTAAAATTCAAGGTGAATTAAAACCAATGATCGAAAGTAA
AGCTTGCGAATATTTAGAGGTTAATTATGAAAGATGGAAACAAAATATGA
TGACTCAAATATATGAGAAATTACGTTCAGAATCACCACAAGAGAAATAT
TCTCAAAAGGAAATGCCATCAACATCTATTAAATCAGAAATTAAACAAGA
AATGAGTTATAGTCAATTTAAATCGGATACCGAATCAAATGATGCCGAGG
TTACACAAAGTAATGAATCAAATATCAAACTGTCCAGTATAAAACTTGAA
CAACATTTGAATCAATCCAACGTTGTAAATTCCTCCAATTTCAGTACCAC
AGTAGCTCCAGCAATGAAATTCTCTCAAAAATCTCCACACAGTAATTTCG
TTACATCGTTACCACCAACCATGCCTCCTCCCATTGGTTTGTTGCCACCA
CCACATAGAATTCCTCCAAACAGTTTGTTCCAACCCCTTCCGCCGCCTCC
ACCACCGATATTTTTGCCCATCGAAAGATTCCCACCTCCTCCACCACCAG
AAAATAAATCATTACCTCCTCCACCACCACCGGAAAACGGACCAAATACT
CCAACAGAAGACTATGTTCCGAAATTCTATGACGGAAGCGTAAACTTGGA
AAAAGTTAAAATTGGACTTTTAAAGACACCCGATAAACCAATTGAAAAAA
GTATGGAAAAAATATTCTCACCGAAAAAAATGATCTGGGGTCAATTAGTT
TTGGCAATTCAAGATATATCTGATGATTCAGCGGCTTCAGATTCTGACCG
ACATGAGCACGAACGTAAACGTTACTCGCGTAAATCTCCTTTGCCTCCGC
GAAATCACAGTGCAATTCGAGATGGATCAACAAAAGCATACGACGAACCG
CCTCGCCATTTGGAAATTCGACAATCAGACTACAATCGCCAGAGAAGGCG
GTCACGACCACGAGAAACTCCTCGACAAAGAGATCCTCGAAGAGATGCTG
ATCGAAGAACTAGTCGACCGGAAAACCCGATTCGTTCACATCAGAAATCC
AATGACTATACCGATGTCTCATCGGAGAGCTTCAATGAATTGGAACTTAA
AGATAACCAGGTTGCTGTGAACAATGCCAATAATACCAAGAAACAAACGC
GATCAAGCAGCAGTGAAGATAGCCACAGTTCTAATAGCAATGATCAAACG
TTGAAAATTATTCGAAAAATCAATAAAAATAAGACGAAATTGCGCAAAAA
ACAAAAAACTCCGAACCTGACTCGTTCATCATCATCATTTTCATCCTCAG
AATCGAGTTCTGGATCTTCTTCATCAGATGTGTCTCAGAGAAATCAGTCA
CAGAATAACTTTGGAAATTACGATAAAAGTTATCGAGTATTCGGTCATTC
ACAGTCTGAAGATAAAGATATGGATATATCTGTTGGTACTCAATCACCAT
CGGTTGATACAAAATGGGACAGTCCAGTCGCTGAAATTAATTTAGATTTG
GTCGATTCAGTTCAATTAAGGAAAGATCAGATCAAAGCTCGTTTGGAAGA
AATCGATGCCAAAAGGAGCTTGTTACAAAAACAACAAATGCTGAAAAAAC
CCGAAAGAGTTTCAGCATCGAATTCATCGTCCTCGTCCAGTAGTGATAGC
TCAAGCGAGAACAGTTCTAGTAGTCATAGTAGTCAAGGTGTCACTGGTAC
AGATAAAGAGCTAATAGATTTGAATCCCAAACCTATGGTGAGTCCGCAAA
ATAATCAGATTCCAGAAAATGAGACATCAGTTCAGAATGTACCGCTCGAA
ACAATTTCGACAGAGGATCTAGAAAAGACAAAACATGATAGTGAACCAGA
GGAAGGTGAGTTATCATCCGAGAGCAGAGCTGGATCTATTAAGCGGGAAA
ACAATTTATGTTGTGAAGAAATTCAAACTTTTACGGTCAATGATGAAATA
GAAATAAAAAAAGATTCATCGGTAAAGGAAGAAGTTCAAGAAATGGTAGA
TATAGATCATAGTAATACCCTTTCTTCTCCAAATAATGAATAATTACAAG
CTGCTAATAATTCTCGAGATCCAAATTCTTGTTGTGTGTGTAATTCTATT
ATTATTATTGTTTTTATTTTTTGCAAC

protein sequence of SMED30025479-orf-1

>SMED30025479-orf-1 ID=SMED30025479-orf-1|Name=SMED30025479-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=784bp
MSHKDYPDYSLKSYDKSIIVEELLEKLKAQGCFDAKRKQFLSEITNKSTY
QNLHTKVENLATKFLETVRWPPSVQKHQLREQLRLHIQSTDQFNNCISRL
IEQEVNCKIQGELKPMIESKACEYLEVNYERWKQNMMTQIYEKLRSESPQ
EKYSQKEMPSTSIKSEIKQEMSYSQFKSDTESNDAEVTQSNESNIKLSSI
KLEQHLNQSNVVNSSNFSTTVAPAMKFSQKSPHSNFVTSLPPTMPPPIGL
LPPPHRIPPNSLFQPLPPPPPPIFLPIERFPPPPPPENKSLPPPPPPENG
PNTPTEDYVPKFYDGSVNLEKVKIGLLKTPDKPIEKSMEKIFSPKKMIWG
QLVLAIQDISDDSAASDSDRHEHERKRYSRKSPLPPRNHSAIRDGSTKAY
DEPPRHLEIRQSDYNRQRRRSRPRETPRQRDPRRDADRRTSRPENPIRSH
QKSNDYTDVSSESFNELELKDNQVAVNNANNTKKQTRSSSSEDSHSSNSN
DQTLKIIRKINKNKTKLRKKQKTPNLTRSSSSFSSSESSSGSSSSDVSQR
NQSQNNFGNYDKSYRVFGHSQSEDKDMDISVGTQSPSVDTKWDSPVAEIN
LDLVDSVQLRKDQIKARLEEIDAKRSLLQKQQMLKKPERVSASNSSSSSS
SDSSSENSSSSHSSQGVTGTDKELIDLNPKPMVSPQNNQIPENETSVQNV
PLETISTEDLEKTKHDSEPEEGELSSESRAGSIKRENNLCCEEIQTFTVN
DEIEIKKDSSVKEEVQEMVDIDHSNTLSSPNNE*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002109	X1 cell
PLANA:0002111	X2 cell

Vocabulary: **biological process**
Term	Definition
GO:0051301	cell division

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 447..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 473..574
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..366
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..224
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 524..549
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 367..404
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 479..514
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 550..573
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 295..349
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..431

Main menu

Biorientation of chromosomes in cell division protein 1-like protein

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Owlery

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