Ribosomal protein L2 domain protein
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30025110 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Human
Match: MRPL2 (mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]) HSP 1 Score: 127.487 bits (319), Expect = 3.059e-33 Identity = 79/231 (34.20%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 220 TTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 T YT P+ K+GGR TGR+ + IGGG K+ ++ R E++I + + RS +IALVA G KRWI AT +M+ GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ C A +G++SN +HNK K G RWLG R SG +K G GR+I L P + + + Sbjct: 70 TKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMKSYVKLPS 300
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Human
Match: AL355385.2 (pep chromosome:GRCh38:6:43051066:43058185:-1 gene:ENSG00000288564.1 transcript:ENST00000673761.1 gene_biotype:protein_coding transcript_biotype:nonsense_mediated_decay gene_symbol:AL355385.2) HSP 1 Score: 107.071 bits (266), Expect = 2.435e-26 Identity = 63/185 (34.05%), Postives = 102/185 (55.14%), Query Frame = 1 Query: 220 TTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNK 774 T YT P+ K+GGR TGR+ + IGGG K+ ++ R E++I + + RS +IALVA G KRWI AT +M+ GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ C A +G++SN +HNK Sbjct: 22 TKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNK 206
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Human
Match: MRPL2 (mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:HGNC:14056]) HSP 1 Score: 88.1965 bits (217), Expect = 1.607e-19 Identity = 54/153 (35.29%), Postives = 81/153 (52.94%), Query Frame = 1 Query: 190 AWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGT 648 +WK+ T YT P+ K+GGR TGR+ + IGGG K+ ++ R E++I + + RS +IALVA G KRWI AT +M+ GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AG Sbjct: 65 SWKS-----RTKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGA 212
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Celegans
Match: mrpl-2 (Mitochondrial Ribosomal Protein, Large [Source:UniProtKB/TrEMBL;Acc:U4PFC3]) HSP 1 Score: 115.546 bits (288), Expect = 4.739e-29 Identity = 84/226 (37.17%), Postives = 121/226 (53.54%), Query Frame = 1 Query: 226 YTHLPLPTVKTGGRGP-TGRVELKHIGGGLKKPTFLVSKYRGGLSN-GAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAH-FAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGEL---RWLGYRQRSGLRQKKTGRYGRRIYNLRP 885 YTH PL + GGR P TGR +HIGGG+K F++ +R G ++ GA + E+I+ I ++ R+ +IAL A KRWI AT +MK GD +++ G + + G+AY IG L+ G + +E+YP + F AGT A I + D +VV K L C A +G++S H I + FG R GY+ SGL KK G +GR++ L P Sbjct: 53 YTHKPLRINRLGGRDPETGRKVNQHIGGGVKFDYFMIDFHRRGPADQGATY--DERILEIRRDPNRTCHIALCAGINGKRWILATENMKAGDVISTSGHLSENPVIGVEGNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDFTVVKLPHKHEFSLHRTCMATVGRLS---HADIDGKIFGSAQMHRRFGYKMSSGLFHKKDGYFGRKVRALPP 273
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Fly
Match: mRpL2 (gene:FBgn0036135 transcript:FBtr0076211) HSP 1 Score: 132.109 bits (331), Expect = 2.946e-35 Identity = 87/243 (35.80%), Postives = 128/243 (52.67%), Query Frame = 1 Query: 226 YTHLPLPTVKTGGRGP-TGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKI-GKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKP 948 YT PL GR P +GR+ K IGGG+K+ V R G + GA+ E ++ + ++ R+ +ALVA G ++I AT +MK GD + + + +I +P GDAY +G L VG + +EK PGQ H AGT I + D+ VV+++ KR C A +G++SNPEHNK +R +G R RSGL ++K G++GR+I L P + PK I + P Sbjct: 56 YTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKWVRDGPTEGAQE---ELVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILRKF-DEKVVVQLPSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGNRPRSGLWKRKEGKHGRKIRRLPPMTTISP-PAPPKEEAIKLTLP 293
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Zebrafish
Match: mrpl2 (mitochondrial ribosomal protein L2 [Source:ZFIN;Acc:ZDB-GENE-050809-12]) HSP 1 Score: 122.094 bits (305), Expect = 1.623e-31 Identity = 79/230 (34.35%), Postives = 126/230 (54.78%), Query Frame = 1 Query: 226 YTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEH-VISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 YT P+ KTGGR TGR++ IGGG K+ ++ R G E V+ E+++ + + RS +IALVA G KRWI A+ +M+ GD + S + ++ + GDA+ +G L VG + +E +PG+GA + AGT ++ + + +++ K +++ C A +G++SN +HNK K G RWLG R SG Q+K G GR+I L + ++ T Sbjct: 60 YTIRPIGMKKTGGRDHTGRIKTHGIGGGHKQRHRIIDFQRLRSEPGKEQPVMVEKVLEVRYDPCRSADIALVAGGNRKRWIIASQNMEAGDLIQSCRGIGRMAVLAQEGDAHPVGALPVGTLIHNLELFPGRGAQYIRAAGTCGVLLRKVSGTAIIQLPSKHQIQVLETCVATVGRVSNVDHNKRIIGKAGTNRWLGIRPSSGRWQRKGGWAGRKIRPLPAMKSYINLPT 289
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Mouse
Match: Mrpl2 (mitochondrial ribosomal protein L2 [Source:MGI Symbol;Acc:MGI:1351622]) HSP 1 Score: 133.265 bits (334), Expect = 1.546e-35 Identity = 87/259 (33.59%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 142 SFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS--KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 S+RP + + + +WK+ T YT P+ K+GGR TGR+ + IGGG K+ ++ ++R E E+++ + + RS +IALVA G KRWI AT +MK GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ CTA +G++SN HN+ K G RWLG R SGL Q+K G GR+I L P + + + Sbjct: 47 SYRPVHMSADRSAKFVSWKS-----RTKYTVKPVKMRKSGGRDHTGRIRVHGIGGGHKQNYRMIDFLRFRPEKEKAPEP-FEEKVVVVRYDPCRSADIALVAGGSRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGGWAGRKIRPLPPMKSYVKLPS 299
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Mouse
Match: Mrpl2 (mitochondrial ribosomal protein L2 [Source:MGI Symbol;Acc:MGI:1351622]) HSP 1 Score: 133.265 bits (334), Expect = 1.757e-35 Identity = 87/259 (33.59%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 142 SFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS--KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 S+RP + + + +WK+ T YT P+ K+GGR TGR+ + IGGG K+ ++ ++R E E+++ + + RS +IALVA G KRWI AT +MK GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ CTA +G++SN HN+ K G RWLG R SGL Q+K G GR+I L P + + + Sbjct: 49 SYRPVHMSADRSAKFVSWKS-----RTKYTVKPVKMRKSGGRDHTGRIRVHGIGGGHKQNYRMIDFLRFRPEKEKAPEP-FEEKVVVVRYDPCRSADIALVAGGSRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGGWAGRKIRPLPPMKSYVKLPS 301
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Mouse
Match: Mrpl2 (mitochondrial ribosomal protein L2 [Source:MGI Symbol;Acc:MGI:1351622]) HSP 1 Score: 65.4698 bits (158), Expect = 1.199e-11 Identity = 51/154 (33.12%), Postives = 76/154 (49.35%), Query Frame = 1 Query: 142 SFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS--KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTV-NSYGIMKQIKGQPKPGDAYNIGCLSVGMSVC 594 S+RP + + + +WK+ T YT P+ K+GGR TGR+ + IGGG K+ ++ ++R E E+++ + + RS +IALVA G KRWI AT +MK GDT+ NS I + G GC S + C Sbjct: 49 SYRPVHMSADRSAKFVSWKS-----RTKYTVKPVKMRKSGGRDHTGRIRVHGIGGGHKQNYRMIDFLRFRPEKEKAPE-PFEEKVVVVRYDPCRSADIALVAGGSRKRWIIATENMKAGDTILNSNHIGRMAGG----------GCTSTWGAAC 186
BLAST of Ribosomal protein L2 domain protein vs. UniProt/SwissProt
Match: sp|Q498T4|RM02_RAT (39S ribosomal protein L2, mitochondrial OS=Rattus norvegicus OX=10116 GN=Mrpl2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.531e-35 Identity = 85/242 (35.12%), Postives = 131/242 (54.13%), Query Frame = 1 Query: 190 AWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAE-HVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 +WK+ I YT P+ K+GGR TGR+ + IGGG K+ ++ R G E E+++ + + RS +IALVA G KRWI AT +MK GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ CTA +G++SN HN+ K G RWLG R SGL Q+K G GR+I L P + + + Sbjct: 63 SWKSRI-----KYTVKPVKMRKSGGRDHTGRIRVHGIGGGHKQNYRMIDFLRFRPEKGTEPEPFEEKVVVVRYDPCRSADIALVAGGSRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGGWAGRKIRPLPPMKSYVKLPS 299
BLAST of Ribosomal protein L2 domain protein vs. UniProt/SwissProt
Match: sp|Q9D773|RM02_MOUSE (39S ribosomal protein L2, mitochondrial OS=Mus musculus OX=10090 GN=Mrpl2 PE=1 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.229e-34 Identity = 87/259 (33.59%), Postives = 139/259 (53.67%), Query Frame = 1 Query: 142 SFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS--KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 S+RP + + + +WK+ T YT P+ K+GGR TGR+ + IGGG K+ ++ ++R E E+++ + + RS +IALVA G KRWI AT +MK GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ CTA +G++SN HN+ K G RWLG R SGL Q+K G GR+I L P + + + Sbjct: 49 SYRPVHMSADRSAKFVSWKS-----RTKYTVKPVKMRKSGGRDHTGRIRVHGIGGGHKQNYRMIDFLRFRPEKEKAPEP-FEEKVVVVRYDPCRSADIALVAGGSRKRWIIATENMKAGDTILNSNHIGRMAVAAQEGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLESCTATVGRVSNVNHNQRVIGKAGRNRWLGKRPNSGLWQRKGGWAGRKIRPLPPMKSYVKLPS 301
BLAST of Ribosomal protein L2 domain protein vs. UniProt/SwissProt
Match: sp|Q2TA12|RM02_BOVIN (39S ribosomal protein L2, mitochondrial OS=Bos taurus OX=9913 GN=MRPL2 PE=1 SV=2) HSP 1 Score: 129.798 bits (325), Expect = 2.058e-33 Identity = 81/232 (34.91%), Postives = 128/232 (55.17%), Query Frame = 1 Query: 220 TTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEH-VISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 T YT +P+ K+GGR TGR+++ IGGG K+ ++ R ++ E++I + + RS +IALVA G KRWI AT +MK GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ CTA +G++SN +HNK K G RWLG R SG +K G GR+I L P + + + Sbjct: 70 TKYTTMPVKMRKSGGRNHTGRIQVHGIGGGHKQRYRMIDFLRFRPEQESKPGPFEEKVIVVRYDPCRSADIALVAGGNRKRWIIATENMKAGDTILNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCTATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMKSYVKLPS 301
BLAST of Ribosomal protein L2 domain protein vs. UniProt/SwissProt
Match: sp|Q5T653|RM02_HUMAN (39S ribosomal protein L2, mitochondrial OS=Homo sapiens OX=9606 GN=MRPL2 PE=1 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.469e-32 Identity = 79/231 (34.20%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 220 TTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVET 912 T YT P+ K+GGR TGR+ + IGGG K+ ++ R E++I + + RS +IALVA G KRWI AT +M+ GDT+ + + ++ + GDA+ +G L VG + VE PG+GA + AGT ++ + + +++ KR +++ C A +G++SN +HNK K G RWLG R SG +K G GR+I L P + + + Sbjct: 70 TKYTITPVKMRKSGGRDHTGRIRVHGIGGGHKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALVAGGSRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSGRWHRKGGWAGRKIRPLPPMKSYVKLPS 300
BLAST of Ribosomal protein L2 domain protein vs. UniProt/SwissProt
Match: sp|B8D0C7|RL2_HALOH (50S ribosomal protein L2 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) OX=373903 GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.025e-16 Identity = 71/204 (34.80%), Postives = 96/204 (47.06%), Query Frame = 1 Query: 235 LPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVAR-GLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALI--------HQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYR 819 L P KTGGR GRV ++H GGG K+ ++ R + + ++ I + RS IAL+ KR+I A ++VGDTV S G +IK PG+A + + VG + +E PG+G A AGT A I H LP V RL+ L C A +GQ+ N +H I K G RWLG R Sbjct: 33 LLAPLKKTGGRNSYGRVTVRHRGGGHKRRYRIIDFKRD------KDGVPARVASIEYDPNRSARIALLHYVDGEKRYILAPNKLQVGDTVKS-GEDAEIK----PGNALKLKNIPVGTIIHNIELKPGKGGQLARAAGTMAQILAKEGKYAHIKLPSGEV------RLISLE--CKATIGQVGNIDHENISIGKAGRKRWLGKR 217
BLAST of Ribosomal protein L2 domain protein vs. TrEMBL
Match: A0A4S2MD51 (Ribosomal_L2_C domain-containing protein OS=Opisthorchis felineus OX=147828 GN=CRM22_000870 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 6.096e-59 Identity = 142/371 (38.27%), Postives = 190/371 (51.21%), Query Frame = 1 Query: 46 TTIIQSSLSRANVNALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS-KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALI-----HQILPD------------DSVVI---KIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKRE----YTFDNPVNVKPL---PVDEN---ETHPRFKWYTWAT 1065 T+ I SL A + L F ++ + G + PGI P S WA K YT + V+TGGRGP G ++ KH GL +P F+V Y + G V+ E ++ I +NWWR+ +ALVA G KRWI ATTSMK GD V S+ + I P+ GDAY +G L VG SVC VE +PG+GA AGT A + H PD + VV+ ++L++L C V+GQ+SN EHNK +YRKFGE W G +QRSGL Q+KTGR+GR+I + P DF + E ++ +KPG P + Y NP KP P N + PRF W +W + Sbjct: 9 TSSIFKSLELA-ASKLEFSVQILRQFGTTTTAHRHPGITFPYHVSKQWAVKRLFD--PEQYTVDAVKLVRTGGRGPDGIIQYKHRTTGLNRPWFMVDYNYSRHIPTGK--VVDEIVLKITRNWWRTPFLALVASGEVKRWIVATTSMKPGDIVRSHVDIPLIPVSPREGDAYPVGALPVGTSVCLVELHPGEGAIRCRAAGTSASVIRRGKHVGDPDCPRPDTLSDVTEEHVVLLRDNGTRKLMRLLPECMVVVGQVSNNEHNKEKYRKFGEKYWHGIKQRSGLWQRKTGRFGRKIRPIGPPLDFVNPEVSAGQMILKVTKPGTPLHNRENERNLYALMNPGKQKPFQPTPKAYNGLPDNQPRFCWSSWTS 374
BLAST of Ribosomal protein L2 domain protein vs. TrEMBL
Match: A0A074ZLB4 (Ribosomal_L2_C domain-containing protein OS=Opisthorchis viverrini OX=6198 GN=T265_08128 PE=4 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 6.228e-59 Identity = 138/358 (38.55%), Postives = 183/358 (51.12%), Query Frame = 1 Query: 85 NALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS-KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALI-----HQILPD------------DSVVI---KIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKRE----YTFDNPVNVKPL---PVDEN---ETHPRFKWYTWAT 1065 N L F M+ + G + PGI+ P S WA K YT + V+TGGRGP G + KH GL +P F+V Y + G V+ E ++ I +NWWR+ +ALVA G KRWI ATTSMK GD + S+ + I P+ GDAY +G L VG SVC VE YPG+GA AGT A + H PD + VV+ ++L++L C V+GQ+SN EH+K +YRKFGE W G +QRSGL Q+KTGR+GR+I + P DF E ++ +KPG P + Y NP KP P N + PRF W +W + Sbjct: 21 NKLEFPMQILRQFGTTTTAHRHPGIIFPYPVSKQWAVKRLFD--PEQYTVDAVKLVRTGGRGPDGITQYKHRTTGLNRPWFMVDYNYSRHIPTGK--VVDEIVLKITRNWWRTPFLALVASGEVKRWIVATTSMKPGDIIRSHVDIPLIPVSPREGDAYPVGALPVGTSVCLVELYPGEGAIRCRAAGTSASVVRRGKHVGDPDCPRPDTLSDVTEEHVVLLRDNGTRKLMRLLPECMVVVGQVSNNEHSKEKYRKFGEKYWHGIKQRSGLWQRKTGRFGRKIRPIGPPLDFVSPEVSASEMILKVTKPGTPLHNRENERDLYAQMNPGKQKPFQPTPKAYNGLPDNQPRFCWSSWTS 374
BLAST of Ribosomal protein L2 domain protein vs. TrEMBL
Match: A0A095AT71 (39S ribosomal protein L2, mitochondrial OS=Schistosoma haematobium OX=6185 GN=MS3_05994 PE=4 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 1.112e-57 Identity = 137/377 (36.34%), Postives = 193/377 (51.19%), Query Frame = 1 Query: 40 LGTTIIQS-SLSRANVNALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAW-KAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQ----------------ILPD---DSVVIKI---GKR-LLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPA-AMKREYTFDNPVNVK------PLPVDENE---THPRFKWYTWAT 1065 LG + +S + S N+ L L + + RPGI +P S WA K P+ YT PLP V+TGGRGP G+++LKH+ GL +P F+V R + + E ++ + K WWR IALVA G KRWI AT SMK GD + S+ + I PK GDAY IG L VG + Q E PGQGA F AG+ A I + L D D V+ + GKR + +L C V+GQ+SN H++ R+RKFGE +W G +QRSGL Q+KTGR+GR++ + P D ++ P + S PG M+++ ++ K P+P NE PR++W +W++ Sbjct: 19 LGNKLFKSFNFSTLNLTKLNPLQIYKHELSTSCSLNRRPGITYPRPVSRYWAISKMRDPH---QYTVDPLPLVRTGGRGPDGKIQLKHVTTGLNRPWFMVDHNRSR-QVLTKTIHEELVLQVKKTWWRHPFIALVASGEVKRWIIATASMKPGDIIRSHVDIPTIPVDPKEGDAYPIGALPVGTIISQFEIKPGQGALFCRTAGSSATIFRRGKYVGSKLNEELNFTSLTDEREDEYVVFVRTNGKRKIYRLLPTCMCVVGQVSNENHDQFRFRKFGEKKWRGIKQRSGLWQRKTGRFGRKVRPIGPPIDLVPCQSSPDYFRLKCSYPGRSEYTMRKKQDMYEALHAKNKPRPQPIPGRHNELPDKMPRYRWCSWSS 391
BLAST of Ribosomal protein L2 domain protein vs. TrEMBL
Match: A0A1S8WZ36 (Ribosomal protein L2 domain protein OS=Opisthorchis viverrini OX=6198 GN=X801_04366 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.286e-57 Identity = 133/336 (39.58%), Postives = 175/336 (52.08%), Query Frame = 1 Query: 151 PGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS-KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALI-----HQILPD------------DSVVIKIG---KRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKRE----YTFDNPVNVKPL---PVDEN---ETHPRFKWYTWAT 1065 PGI+ P S WA K YT + V+TGGRGP G + KH GL +P F+V Y + G V+ E ++ I +NWWR+ +ALVA G KRWI ATTSMK GD + S+ + I P+ GDAY +G L VG SVC VE YPG+GA AGT A + H PD + VV+ ++L++L C V+GQ+SN EH+K +YRKFGE W G +QRSGL Q+KTGR+GR+I + P DF E ++ +KPG P + Y NP KP P N + PRF W +W + Sbjct: 57 PGIIFPYPVSKQWAVKRLFD--PEQYTVDAVKLVRTGGRGPDGITQYKHRTTGLNRPWFMVDYNYSRHIPTGK--VVDEIVLKITRNWWRTPFLALVASGEVKRWIVATTSMKPGDIIRSHVDIPLIPVSPREGDAYPVGALPVGTSVCLVELYPGEGAIRCRAAGTSASVVRRGKHVGDPDCPRPDTLSDVTEEHVVLLRDNGTRKLMRLLPECMVVVGQVSNNEHSKEKYRKFGEKYWHGIKQRSGLWQRKTGRFGRKIRPIGPPLDFVSPEVSASEMILKVTKPGTPLHNRENERDLYAQMNPGKQKPFQPTPKAYNGLPDNQPRFCWSSWTS 388
BLAST of Ribosomal protein L2 domain protein vs. TrEMBL
Match: H2KUG3 (39S ribosomal protein L2 OS=Clonorchis sinensis OX=79923 GN=MRPL2 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 2.665e-56 Identity = 135/358 (37.71%), Postives = 183/358 (51.12%), Query Frame = 1 Query: 85 NALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS-KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALI-----HQILPD------------DSVVI---KIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKRE----YTFDNPVNVKPL---PVDEN---ETHPRFKWYTWAT 1065 N L F ++ + G + PGI P S WA K YT + V+TGGRGP G + KH GL +P F+V Y + G V+ E ++ I +NWWR+ +ALVA G KRWI ATTSMK GD + S+ + I P+ GDAY +G L VG SVC VE +PG+GA AGT A + H PD + VV+ ++L++L C V+GQ+SN EH+K +Y+KFGE W G +QRSGL Q+KTGR+GR+I + P DF + E ++ +KPG P + Y NP KP P N + PRF W +W + Sbjct: 21 NKLEFSVQILRQFGTTTTAHRHPGITFPYPMSKQWAVKRLFD--PEQYTVDAVKLVRTGGRGPDGVTQYKHRTTGLNRPWFMVDYNYSRHIPTGK--VMDEIVLKITRNWWRTPFLALVASGEVKRWIVATTSMKPGDIIRSHVDIPLIPVSPREGDAYPVGALPVGTSVCLVELHPGEGAIRCRAAGTSASVVRRGKHVGDPDCPRPDTLSDVTEEHVVLLRDNGTRKLMRLLPECMVVVGQVSNNEHSKEKYKKFGEKYWHGIKQRSGLWQRKTGRFGRKIRPIGPPLDFVNPEASAGQMILKVTKPGTPLHNRENERDLYAQVNPGKQKPFQPTPKAYNGLPDNQPRFCWSSWTS 374
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Cavefish
Match: mrpl2 (mitochondrial ribosomal protein L2 [Source:NCBI gene;Acc:103037714]) HSP 1 Score: 130.954 bits (328), Expect = 1.110e-34 Identity = 83/228 (36.40%), Postives = 125/228 (54.82%), Query Frame = 1 Query: 226 YTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAE-HVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHV 906 YT P+ KTGGR TGRV IGGG K+ ++ R G E I E+++ + + RS +IALVA G KRWI AT +M+ GD + + ++ ++ GDA+ +G L VG + +E YPG+GA + AGT ++ + + ++V K +++ C A +G++SN +HNK K G RWLG R SGL ++K G GR+I L P F ++ Sbjct: 71 YTIRPIGIKKTGGRDYTGRVIRHRIGGGHKQKYRMIDFQRLRYEAGKEGEQIVEKVVEVRYDPCRSADIALVAGGNRKRWIIATENMQAGDLIKTSSVIGRMAVLANEGDAHPLGALPVGTLINNLELYPGKGAQYIRAAGTCGVLLRKVNGTAIVQLPSKHQIQVLETCVATVGKVSNIDHNKRVIGKAGRNRWLGIRPSSGLWKRKGGWAGRKIRPLPPMKSFINL 298
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Sea Lamprey
Match: mrpl2 (mitochondrial ribosomal protein L2 [Source:ZFIN;Acc:ZDB-GENE-050809-12]) HSP 1 Score: 125.176 bits (313), Expect = 3.249e-33 Identity = 81/232 (34.91%), Postives = 123/232 (53.02%), Query Frame = 1 Query: 223 TYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYR------GGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFT 900 TYT P+ KTGGR TGR+ IGGG ++ ++ R G + + V+ E+++ + + RS +IALVA G KRWI AT SM+ GD + + G + ++ GDAY +G L VG + +E PG GA AGT L+ + + +++ K ++++ C A +G++S EHNK K G R G R +SGL Q+K G GR+I L P ++ Sbjct: 70 TYTIRPIGRKKTGGRDHTGRIRTHGIGGGHRQCYRMIDFKRLPEGLMAGRLDENKKVMEEKVMEVRYDPLRSADIALVAGGTHKRWIIATQSMQPGDVIKTSGFIGRMAVLAHEGDAYPVGALPVGTLINNLEVKPGAGAQLIRAAGTCGLLIRKVEGTAIIQLPSKHQIQVAETCMATVGRVSRVEHNKEPIGKAGRNRRFGRRPQSGLWQRKGGWAGRKIRPLPPIKNYA 301
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Yeast
Match: RML2 (Mitochondrial ribosomal protein of the large subunit (L2); has similarity to E. coli L2 ribosomal protein; mutant allele (fat21) causes inability to utilize oleate, and induce oleic acid oxidation; may interfere with activity of the Adr1p transcription factor [Source:SGD;Acc:S000000776]) HSP 1 Score: 54.6842 bits (130), Expect = 9.789e-9 Identity = 57/213 (26.76%), Postives = 96/213 (45.07%), Query Frame = 1 Query: 253 KTGGRGPTGRVELKHIGGGLKKPTFLV--SKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKR--WIYATTSMKVGDTVNSY------GIMKQIKGQPKP----------GDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDS---VVIKIGK-RLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYR 819 K GGR +G++ ++H GGG + T L+ +++ GG ++ + I + RS +IAL+ T +I A ++ GD V S+ ++ ++ G+ P G+ I + +G + V P F +AGT A + LP+ V ++ G+ R + L A A +G +SN +H K G RWLG R Sbjct: 129 KHGGRNNSGKITVRHQGGGHRNRTRLIDFNRWEGG---------AQTVQRIEYDPGRSSHIALLKHNTTGELSYIIACDGLRPGDVVESFRRGIPQTLLNEMGGKVDPAILSVKTTQRGNCLPISMIPIGTIIHNVGITPVGPGKFCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEA--VATIGVVSNIDHQNRSLGKAGRSRWLGIR 330
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Nematostella
Match: EDO48947 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI04]) HSP 1 Score: 82.0333 bits (201), Expect = 1.928e-18 Identity = 64/198 (32.32%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 262 GRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHV--ISEQIIYIHKNWWRSENIALVARGLT--KRWIYATTSMKVGDTVNSYGIMKQIKGQP------KPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQA-LIHQILPDDSVVIKIGKRLLK-LSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYR 819 GR +G++ L+H GGG + ++ R L E V I ++++ + + RS IALVA + ++ + A ++VGD +M +G+P KPGDAY + L +G V +E YPG+GA A AGT A LI + +++ V+++ ++ K +S+ C A +G++SN E K G RWL R Sbjct: 1 GRNSSGQIVLRHRGGGHSQNYRIIDFIRAPLCITGEAVTPIKDKVLQVGYDPCRSARIALVAGNGSNQEKLVIAPDEIQVGD------VMTASRGKPESLALLKPGDAYPLCFLPIGTVVHNIELYPGKGAQLARAAGTSAQLIRKT--NETAVVRLPSKVEKEVSSKCLASVGRVSNIERKNRVIGKAGRNRWLNRR 190
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Medaka
Match: mrpl2 (mitochondrial ribosomal protein L2 [Source:NCBI gene;Acc:101171275]) HSP 1 Score: 126.331 bits (316), Expect = 4.140e-33 Identity = 80/228 (35.09%), Postives = 124/228 (54.39%), Query Frame = 1 Query: 226 YTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVS--KYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTH 903 Y+ P+ KTGGR TGRV IGGG K+ ++ + R +G E+++ + + RS +IALVA G KRWI AT +M+ G+ + + G++ ++ GDAY +G L VG V +E PG+GA + AGT ++ + + ++V K+ +++ C +G++SN +HNK K G RWLG R SGL Q+K G GR+I L P + + Sbjct: 64 YSIRPMGMKKTGGRDHTGRVRTHGIGGGHKQKYRMIDFQRLRYEAPDGGRP-FEEKVVEVRYDPCRSADIALVAGGNRKRWIIATETMQAGNIIKTSGVIGRMAVSANEGDAYPLGALPVGTLVNNLEVQPGRGAEYIRAAGTSGVLLRKVNGTAIVQLPSKQQVQVLETCMVTVGRVSNVDHNKRVIGKAGRNRWLGIRPSSGLWQRKGGWAGRKIKPLPPMKSYVN 290
BLAST of Ribosomal protein L2 domain protein vs. Planmine SMEST
Match: SMESG000000489.1 (SMESG000000489.1) HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0 Identity = 345/347 (99.42%), Postives = 347/347 (100.00%), Query Frame = 1 Query: 28 MFKLLGTTIIQSSLSRANVNALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHFAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRYGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKREYTFDNPVNVKPLPVDENETHPRFKWYTWATR 1068 MFKLLGTTIIQSSLSRANVNALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAH+AVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGR+GRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKREYTFDNPVNVKPLPVDENETHPRFKWYTWATR Sbjct: 1 MFKLLGTTIIQSSLSRANVNALGFLMRQPKLGGIASERSFRPGILHPNGYSFDWAWKAAIPNIDTTYTHLPLPTVKTGGRGPTGRVELKHIGGGLKKPTFLVSKYRGGLSNGAEHVISEQIIYIHKNWWRSENIALVARGLTKRWIYATTSMKVGDTVNSYGIMKQIKGQPKPGDAYNIGCLSVGMSVCQVEKYPGQGAHYAVNAGTQALIHQILPDDSVVIKIGKRLLKLSAGCTAVLGQMSNPEHNKIRYRKFGELRWLGYRQRSGLRQKKTGRFGRRIYNLRPAADFTHVETEPKSGVISYSKPGMPAAMKREYTFDNPVNVKPLPVDENETHPRFKWYTWATR 347 The following BLAST results are available for this feature:
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 3
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 3
BLAST of Ribosomal protein L2 domain protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Ribosomal protein L2 domain protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 1
BLAST of Ribosomal protein L2 domain protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 1
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30025110 ID=SMED30025110|Name=Ribosomal protein L2 domain protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1183bpback to top protein sequence of SMED30025110-orf-1 >SMED30025110-orf-1 ID=SMED30025110-orf-1|Name=SMED30025110-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=348bp MFKLLGTTIIQSSLSRANVNALGFLMRQPKLGGIASERSFRPGILHPNGYback to top Annotated Terms
The following terms have been associated with this transcript:
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