histone-lysine N-methyltransferase SETD1B-A
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30025052 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 12
Homology
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. TrEMBL
Match: A0A2T7P701 (Uncharacterized protein OS=Pomacea canaliculata OX=400727 GN=C0Q70_11802 PE=4 SV=1) HSP 1 Score: 277.33 bits (708), Expect = 9.161e-76 Identity = 239/869 (27.50%), Postives = 414/869 (47.64%), Query Frame = 1 Query: 205 RFSELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSXXXXXXXXXXXXXNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDG----IKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDL--------------------------FTKE-----LEDNKSXXXXXXXXXXXXXXXXXXXXXXXTVDVSVGTSDLNFSQTLVMKIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNN--LYRSIKI-ILLTNDKSEKKIAHATIDWDEIKDL-------------------------DLKIFKEYNFRGDMVTPPPLSDEKPFSNLEP--------MMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKVDESLSPRSETP--KPATVLKSEFDAISNKFEEKLNSIREYYENKISEI-------SENNVKLSEKEP-----VRPPTVYHKDCAVS--------PIFPYRHVPGNRRLEKRETREVDNVNENRFSSKSRETLSTSGPDNQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNN---QLSVLNLFEM 2523 +F LC V+N + +V NS ++ + K LL + P VL++L++ + +LFRSISD+ ++EL+RLVR++S PWE+KS AL+KLH DYE K QL++A++ L + KR+ +++ + NWE LFT+ + HGRRWK+ + K KA+ G+ ++ Y Q L + + + +K+ E + S+ ++ +S T+ E+ T E L+D S + E+ + +V T + + ++L +++Y P+G++ + LR + D I+ T LD +D+ E E AV G+ R + +V ++ +K +E I +P +V G Q N + I + + + + E+ A A+I++ +IK+ DL F + +++ P SD K + L+ + FPLY + S++ G +P+ F+ ++ER ++ R T T +N LV ELTG++L +K +L +E +D S S TP + TV K E+D + + +E+L I+E YE ++ E+ E N+ LS+++ +RP + + +S P+ + +P + + R + ++ + + L + G +++E A + + +LP+ F ER+ F E+S +K++L+ R E+ ++E KLA +KL+ EE V AL D+ LPA+FMP TG I+NPRAHQYFHP G + RL+Q PS+F+LPP+ +N +L V+NLFE+ Sbjct: 54 KFDGLCDGVLNAIALVHNSFKEMLDLKDKLLNHALPPPVLIQLAMTSSRLFRSISDLNMTVNELVRLVRLFSTPWEEKSAALKKLHEDYESKQRQLNIAIKRLQLVDAHSKRIAREKRIMNWEKLFTKVTSSKGHGRRWKFLIETIKQKARMGLEHVQAYTQALEESSESEDEDVADKAPIARAESGLKGSKDTDEQEDSDDTDNEEADEESGFEGSEIKLNGFEATHIPIVIHVTAEDEEENLDDTFSRVGSPKKVRFNEETVVTQAVKPPVAESAVWTGEPEYDRSLFVRVYCPDGLQQTQ-LRCTLTCNDQIFKTGILDPA-----DDEESEVEQPAKRPKAAVH-----GMSTTRPSPEVSLTNYG-----------GVKKHKKFKEFEILVPEEVPKGALQLNKQVAEPANIQVAVHHGQYEELFAMASINFQDIKESNLQTVYLQPVYGNDTSLQLELGSSSDLADFDSVSDSVELMLPDDNSDNKMHTVLQEDQARDINILPFPLYP-LHAGRSDALHKPCGTVPLMLFWGKRERPRMYTRQTGTLGLNDLVFELTGIDLSTTTKEDLHKEAMDRSTSAVIFTPDVQEETVTKLEYDQLVYRHQEELQYIQEEYERRLQELMQSLEAMQEENLALSQQQQQQQQILRPLSTSSHNSRISRGSASSPGPVH-FIPMPPKKTMTPRSSSAEKTMSRLTTPVEVKSMLESGGTKSRSEPPRTAKSQRKVKVGHALPKWGESLPQDFFERLRLFQEESKIHKQELSERTLKELKDSLEKKLAGQHKLSKQ--EELVYDALKDVSLPALFMPL--KTGNIFNPRAHQYFHPTGTTDVRLTQPPSVFQLPPLPSNNRQKLPVVNLFEL 894
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. TrEMBL
Match: A0A1W2W622 (uncharacterized protein LOC100180644 OS=Ciona intestinalis OX=7719 GN=LOC100180644 PE=4 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.128e-62 Identity = 235/853 (27.55%), Postives = 396/853 (46.42%), Query Frame = 1 Query: 205 RFSELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSXXXXXXXXXXXXXNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDE-------------DDGIKEK-----SIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSXXXXXXXXXXXXXXXXX----------------XXXXXXTVDVSVGTSDLNFSQTLVMKIYNPNGIEHFE--NLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSE------------KKIAHATIDWDEIKDLDLKI----------FKEYNFRGDMVTPPPLSDEKP-------FSNLEPMMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKVDE--------SLSPRSETPKPATVLKSEFDAISNKFEEKLNSIREYYENKISEISENNVKLSEKEPVRPPTVYHKDCAVSPIFPYRHVPGNRRLEKRETREVDNVNENRFSSKSRETLSTSGPDNQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKN-FRLSQAPSIFKLPPI-KNNQLSVLNLFEMGNHMQ 2538 +F LC V NC+ +V +S S+L + K LL+ + PS+LV ++L+ GK+FRSI+D++ P+ EL RLV +YS PWE++SEAL+KLH DYE K QL++A+R L + +R+ ++ + NWE F + + HGRRWK+ + FK K ++G+ NLH+ L D+ DDG+ EK S+ A P D T + S + D E+ D+ ++ + + K + + D SV T + F Q LV++I+ P ++ E +L + +G + T L + + +E+ + V ++S+ KLG G+ ++ K+ ++ ++ + ++ +N N + +++ DK++ K IA ATI WDEI++ +I KE + T SDE+ +N E M PL I S LGQLP+ C++ E+ T+ I LV+++TGV+++ I+K+EL + E S + K + E + I + + +L +I++ YE K+ ++ L E E ++ + + +F + G R E ++ +VD+ ++ + R P + + + A + NLP++ R+ +E+ ++ L RI++ I+ IE KLA YKL +E++ L D+ LPA+FMP + G +YNPRAHQYFHP G RL+Q PSIF+LPP+ + +LSV+NLFE+ + Q Sbjct: 43 KFDCLCDGVNNCLSMVDSSFSELLDLKDELLQHELPPSLLVAITLVTGKMFRSITDLHTPIQELTRLVNIYSIPWEQRSEALKKLHTDYESKQRQLNIAIRRLQLIDAHTRRLDMEKRIMNWEKAFAKVTSSKTHGRRWKFLIEAFKKKLKDGV-NLHELEVELSDDESELDQDEPEHIVDDGVSEKQRFMLSVITASPPADDDG---TPQAGSDIESEADGIPSEISDSTGNVDDGSPDVKQRKRGVSFGPESDEPEIREVIREVVVKPPSEDKSVWTHEPEFDQHLVVRIFRPVELKDDEGLDLSCNVSFGGINKKTPTLASSSAHHTP-QTMEQVVQAEEAEVELKSQGKLG--GKSGRRKSIGFAKTPSSPAVPSSPSKVAAKPSSILKKVKVDDEPSDALNINR-SKYQEVMFDVGDKTDALRISVHQGEQAKMIAMATITWDEIQEKKFRIKMDEDNSSSQHKEKTTNNE--TGKTESDERDELTFEDRLANDELSMLPLQGIKLGIGGHSHGV-LGQLPVLCYWVMNEKMRYSDVQVNTDGIRELVQDVTGVDMNEITKDELVKMLSKEYNDVCTSAMSFVSSSSHKSGFIPVEEIEVIREQHDLELKNIQDEYEVKVQQL------LVEVERLQ--------TSQTQMFVQPAIDGESRYETKD--KVDHKHQ-KLPGIPRPPSPEGRPHSPSSHWRAP-------KIPQLPDWGANLPKNVWVRMRLLTEEMIIKRQQLDARIRSRIASNIEKKLASQYKLQR--SEKNFHGPLQDVSLPALFMP--SKGGNVYNPRAHQYFHPTGTSGELRLTQPPSIFQLPPLPEKAKLSVVNLFELSKNFQ 856
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. TrEMBL
Match: A0A3M7QIP5 (Outer dense fiber 3 (Fragment) OS=Brachionus plicatilis OX=10195 GN=BpHYR1_018577 PE=4 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.477e-50 Identity = 224/861 (26.02%), Postives = 406/861 (47.15%), Query Frame = 1 Query: 214 ELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSXXXXXXXXXXXXXNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKE------KSIFVAREPQMYDSRSKTQRNESSRTNY----------EDLFTKELEDN--------------KSXXXXXXXXXXXXXXXXXXXXXXXTVDVSVGTSDLNFSQTLVMKIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLR-YLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLS-------------------DEKPFSNLE------PMMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKV-----DESLSPRSETPK-------PATVLKSEFDAISNKFEEKLNSIREYYENKISEISENNVKLSEKEPVRPPTVYHKDCAVSPIFPYRHVPGNRRLEKRETREVDNVN-ENRFSSKSRETLSTSGPDNQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNN-QLSVLNLFEMGNHMQIKHYENDFNNHMNKKA 2586 E C + M I + D+ + K LL + P +L KL++I GK+FRS SD+ P++E++RLV++YS WEK S L+K+H YE K L+LA++ LA ++ K +++ + NWE LF R + HGRRW++++ F+ K L + +L + +D ++E K + A E Q D K + ++N ED K E+N +S+E+ + ++ ++ V+ E D S+ T + ++S+ L+++++ P + + + ++ +I G++ ++ + + K++ I D + T +KSK I KNK+ E+ +D + E +++ Y EK E + I + SI I L D++E+ ++ + D++ LDL I F D + L E+ FS+ E P F +Y+ + S + LP+ F+ RK + +++T T+ I L+E+LTG +++ SK E+Q+ D + SP P+ P++ +S I N +KL+ I E Y+ K+ E+ KL +Y + +S I + +EK + + +N +N K+ S + ++NL +++K ++ S++ L E F ER+ F++KSY +++++ + ++ + +E ++A L++L+ + E L D CLPA+FMP S +YNPRA QYFH G + R++Q PSIF+LPP+ + LSV+NL+++G + + N ++N A Sbjct: 44 ETCQTSFSEMQI---AIQDMLKLKDELLMHFLPPPLLFKLTVIFGKIFRSFSDLNTPVNEMLRLVKIYSTSWEKNSIVLKKIHDLYENKKQLLNLAIKRLAMVDKKTKLFAREKRVLNWEKLFVRLSESKGHGRRWRFQIDNFRKKTSLNYEELVKW--VLRESNDQLEENLKRDIKELSKANEKQFVDPDKKISNEKFEKSNLCIEMDKSNFSEDPIKKMNEENYINEVDSVQDFFSEESSEDGKKEKETKQVVDINIQTEPEMFDKSIWTGEPSYSRFLIIRLFKPTEL-YNKKIKFKITLGNISQYSKSFEIIKKVVIVDNK----------TQFRNNKSKNSRIEIEKNKEES--ERKIDLNKYEDFVFQVKDYSEKKEILCTSIDD-------------SIGIELAGADENEELFGYSLLQLDDVHTLDLPILYHKEFLQDEIADHVLETKEDLKNYDASKFLDSNELTEESFSSYEILSKRSPFTFEMYK----TKTVKSGDNICMLPLMFFWVRKPNTLNCNKNTNTKSIKDLIEDLTGFDIEKQSKEEIQELSRPKNLHDIACSPIQIEPEYSSIKKTPSSPTESRISFIKN---DKLDEIHEEYQMKMDEL-----KL---------VIYRLENEISKIKSLNELKPVEMIEKSKKK----MNPQNPAQKKNNLQKSNEKKEISSDNL-----IYKKNDTKKQSLWSEKLQEGFYERLRQFNQKSYLHQKEMIEKYVSQEAAILEQQMAVLHRLDRNNYNEK---QLDDFCLPAVFMPI-KSNNNVYNPRARQYFHATGT-DVRITQPPSIFQLPPLPSRPTLSVINLYDLGKRYESGEPDFYINEYINSTA 838
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. TrEMBL
Match: A0A210PMG8 (Uncharacterized protein OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT07872 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.580e-40 Identity = 172/672 (25.60%), Postives = 292/672 (43.45%), Query Frame = 1 Query: 205 RFSELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSXXXXXXXXXXXXXNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLD------------------EDDG--------IKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSXXXXXXXXXXXXXXXXXXXXXXXTVDVSVGTSDLNFSQTLVMKIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGI-------NQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLK--IFKEYNFRGDMVTPP-------------PLSD--------------EKPFSN-----LEPMMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKVDESLSP-----------------------------------------------RSETPKPATVLKSEFDAISNKFEEKLNSIREYYENKISEISEN 1878 +F LC V+N M +V S +L + K +LK + P++L+KL+ I GK+FRSISD+ P++EL+RLV VYS PWE+KS AL+KLH DYE K QL++A++ L + KR+ +++ + NWE LF + ++ HGRRWK+ + K KAQ G+ ++ +Y + L + +DDG ++E+ + + + E S N E+ +E ED S + ++ + E T +VS T + + L M+++ P G++ ++++ I YG + T LD + GLIG K K ++ D++ K++ + + EE+ IP +V G+ N+ S+ + E+ A ATID ++IK LDLK E + D+ T P LSD ++P +N +E + FPL V +S G LP+ + ++ + F+R T +N LV +L G++LD K +L +E D++ S + PK +LK +FD + +K L++I+E YE ++ +++++ Sbjct: 49 KFDNLCDGVLNSMALVHGSIRELLDMKDEMLKHALPPTLLIKLATITGKVFRSISDLNMPVNELVRLVHVYSTPWEEKSTALKKLHEDYESKQRQLNIAIKRLQLVDAHSKRIAREKRIMNWEKLFAKIMSNKGHGRRWKFLIETIKQKAQLGLEHVQEYSKALEESSEEEGEDDDEIPIKLNRQDDGGDSDKLSDLEEEENEEGGVEEESEKADTEEGGEESAENQEEDGKEETEDPSSRVGTPKKVRFADEKKVEP-----TKEVSTWTHEPQYDNFLYMRVFTPTGLDQ-KDIKCMIKYGAKTHKTGRLDPEE---------------QEPPPEEPKPKAKGLIGS-KGKALQ------DKLEKKKKAEEKATKSRFEEMSFDIPEEVPDGVWTKPTKEEPQNIQVSVHV-----GPQEEIFAMATIDMEDIKALDLKEVYLPEPHGDDDVPTTPRGRGGRSDVGDFDSLSDDVEISLPGEDVKKQQEPVANELVKDIEAVPFPLLS-VNPAKGDSMHASCGTLPLVMYIGKRLKPQEFNRQCGTMTLNSLVFDLAGIDLDTWRKEDLNKELRDQASSALRLTPEPPKEPTPPPPPPKEPTPPPPPPKELTPPPPKEPTPPPPSKELTPEPKEEMILKRDFDEMMDKHNNDLHNIQEEYEKRLQQLTDS 686 HSP 2 Score: 123.635 bits (309), Expect = 6.776e-25 Identity = 59/123 (47.97%), Postives = 91/123 (73.98%), Query Frame = 1 Query: 2158 NLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKN-NQLSVLNLFEM 2523 +PE FL+R+++F E+S K+KE++ ++I +I + IE KLA +KL+ EE++ AL ++ LPA+FMP+ GT++NPRAHQYFHP G + RL+Q PS+ +LPP+ N +++SVLNLFE+ Sbjct: 814 GIPEDFLDRLAWFEEESNKHKEEMVSKISKQIQEDIERKLAGQHKLSK--KEEEIYDALKEVSLPALFMPYKR--GTVFNPRAHQYFHPNGSSDLRLTQPPSMIQLPPLPNKSKMSVLNLFEL 932
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. TrEMBL
Match: A0A0B7A583 (Uncharacterized protein (Fragment) OS=Arion vulgaris OX=1028688 GN=ORF98547 PE=4 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 3.284e-39 Identity = 162/620 (26.13%), Postives = 281/620 (45.32%), Query Frame = 1 Query: 922 DVSVGTSDLNFSQTLVMKIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRR---KNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGI---NQNNLYRSIKIILLTN-DKSEKKIAHATIDWDEIKDLDLKIFK------------------EYNFRGDMVT-----PPPLSD-----------EKPFSNLEPMMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKVDESLSPRSETPK--PATVLKSEFDAISNKFEEKLNSIREYYENKISEISENNVKLSEKEPVRP-PTVYHKDCAVSPIFPYRHVPGNRRLEKRETREVDNV----NENRFSSKSRETLSTSGPDNQNENLYAAFDLHEKTNSANTSVFKI-------------------------------NLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFEMGNHMQIK 2544 D T + F + L ++I++P G++ E L+ + Y ++ T L+ + +D N+ + + L R+ K++ + L+ RK++ E +I +P+++ G+ N+ L ++ + K E+ IA +I + +IK + L+ ++F GD + P + D E N EP F LY +++ S++ G LP+ ++ + R + F+R T I+ LV ++TG++L S+ +L +E VDE+LS S TP+ V KSE D + + ++++ ++E YE ++ E+++ N+++++ + + P H+ VS + G R ++ +D V EN F + TS P N + L TNS T V NLP+ F ER+ + E+S ++K++L R EI +E KLA +KL+ EE + AL D+ LPA+FMP+ TG +YNPRAH YF P G N RL+Q PS+F+LPP+ + +LSV+NLFE+ + I+ Sbjct: 7 DAQSWTQEPEFDRVLFVRIFSPEGLKQSE-LKCSLSYNGNMFKTPILESQNDENSDD---------NIPGIMTSRPKERPLAARKILDKSQGITNLKPGSSSGRKKRF----------YEFQIKLPDEIKDGVSLLNEKPLPEPQELRFAVHMGKFEEIIAVTSIAFHDIKKMSLETISLPPPHGDNDAPGRSSRPGSFSFDGDSLGDSLDIPIIMDDHFDHLTSSSPHEDLIKNKEPHNFSLYS-LQSGKSDAVRAPCGNLPVLMYWGKCVRPLYFNRQCGTRGISDLVFDMTGIDLTTASQEKLHKEMVDEALSVVSFTPRIEQDMVSKSELDKLVEQHQQEMVDLQEVYEKRLQELTD-NLQVTQSDYTKSLPLENHRSRPVSTTSEFNRT-GTLSPGIRLSKSLDPVLMENGENVFPKE------TSLPLNLDRTL---------TNSVRTPVLSASLSTKQRSLPPRTHKPSKNYRVGQRLPRWGENLPQDFFERLRLWEEESKQHKQELNERTLKEIKDNLERKLAGQHKLSKH--EEQMYDALKDVSLPALFMPY--KTGHVYNPRAHNYFQPTGATNVRLTQPPSVFQLPPLPDTKLSVVNLFELSKNFHIQ 584
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Planmine SMEST
Match: SMESG000062286.1 (SMESG000062286.1) HSP 1 Score: 1559.27 bits (4036), Expect = 0.000e+0 Identity = 823/835 (98.56%), Postives = 828/835 (99.16%), Query Frame = 1 Query: 124 MSVKFSGQDXXXXXXXXXXXXXXXXXXRFSELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSXXXXXXXXXXXXXNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSXXXXXXXXXXXXXXXXXXXXXXXTVDVSVGTSDLNFSQTLVMKIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLSDEKPFSNLEPMMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKVDESLSPRSETPKPATVLKSEFDAISNKFEEKLNSIREYYENKISEISENNVKLSEKEPVRPPTVYHKDCAVSPIFPYRHVPGNRRLEKRETREVDNVNENRFSSKSRETLSTSGPDNQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFEMGNHMQIKHYENDFNNHMNKKALNASESAKIFSVDN 2628 MSVKFSGQDENIVFEEEINEISKEEENRFSELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSAQLDLAL+ALARQNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSTENEEYQESVEEKVETESIEPIETVDVSVGTSDLNFSQTLVM+IYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIE ELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLSDE PFSNLEPM FPLYEYVENINSE SPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLD ISKNELQQEKVDESLSPRSETPKPATVLKSEFDAISNKFEEKLN+IREYYENKISEISENNVKLSEKEPVRP TVYHKDCAVSPIFPYRHVPGN RLEKRETREVDNVNENRFSSKSRETLSTSGPD+QNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFE+GNHMQIKHYENDFNNHMNKKALNASESAKIFSVDN Sbjct: 1 MSVKFSGQDENIVFEEEINEISKEEENRFSELCSNVINCMVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSAQLDLALKALARQNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSTENEEYQESVEEKVETESIEPIETVDVSVGTSDLNFSQTLVMRIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIENELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLSDENPFSNLEPMTFPLYEYVENINSECSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDTISKNELQQEKVDESLSPRSETPKPATVLKSEFDAISNKFEEKLNAIREYYENKISEISENNVKLSEKEPVRPQTVYHKDCAVSPIFPYRHVPGNTRLEKRETREVDNVNENRFSSKSRETLSTSGPDDQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFEIGNHMQIKHYENDFNNHMNKKALNASESAKIFSVDN 835
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Planmine SMEST
Match: SMESG000062286.1 (SMESG000062286.1) HSP 1 Score: 1519.6 bits (3933), Expect = 0.000e+0 Identity = 784/796 (98.49%), Postives = 789/796 (99.12%), Query Frame = 1 Query: 241 MVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSXXXXXXXXXXXXXNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSXXXXXXXXXXXXXXXXXXXXXXXTVDVSVGTSDLNFSQTLVMKIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIEKELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLSDEKPFSNLEPMMFPLYEYVENINSESSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDAISKNELQQEKVDESLSPRSETPKPATVLKSEFDAISNKFEEKLNSIREYYENKISEISENNVKLSEKEPVRPPTVYHKDCAVSPIFPYRHVPGNRRLEKRETREVDNVNENRFSSKSRETLSTSGPDNQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFEMGNHMQIKHYENDFNNHMNKKALNASESAKIFSVDN 2628 MVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSAQLDLAL+ALARQNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSTENEEYQESVEEKVETESIEPIETVDVSVGTSDLNFSQTLVM+IYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIE ELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLSDE PFSNLEPM FPLYEYVENINSE SPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLD ISKNELQQEKVDESLSPRSETPKPATVLKSEFDAISNKFEEKLN+IREYYENKISEISENNVKLSEKEPVRP TVYHKDCAVSPIFPYRHVPGN RLEKRETREVDNVNENRFSSKSRETLSTSGPD+QNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFE+GNHMQIKHYENDFNNHMNKKALNASESAKIFSVDN Sbjct: 1 MVIVQNSQSDLSEFKSLLLKENIAPSVLVKLSLINGKLFRSISDMYNPLSELIRLVRVYSEPWEKKSEALRKLHVDYEKKSAQLDLALKALARQNEDMKRVTKKETLQNWEFLFTRAQVHRNHGRRWKYKMFEFKMKAQEGINNLHDYFQILLDEDDGIKEKSIFVAREPQMYDSRSKTQRNESSRTNYEDLFTKELEDNKSTENEEYQESVEEKVETESIEPIETVDVSVGTSDLNFSQTLVMRIYNPNGIEHFENLRARIIYGDMIYHTNNLDKTKELEIEDKRIENELSGNLTTVAVESKSKLGLIGRRKNKQVKPLEKSVDQIRKEQLDKRLRYLEKHEEIRIPIPNDVVSGINQNNLYRSIKIILLTNDKSEKKIAHATIDWDEIKDLDLKIFKEYNFRGDMVTPPPLSDENPFSNLEPMTFPLYEYVENINSECSPTQLGQLPISCFYSRKERQILFHRSTETEPINRLVEELTGVNLDTISKNELQQEKVDESLSPRSETPKPATVLKSEFDAISNKFEEKLNAIREYYENKISEISENNVKLSEKEPVRPQTVYHKDCAVSPIFPYRHVPGNTRLEKRETREVDNVNENRFSSKSRETLSTSGPDDQNENLYAAFDLHEKTNSANTSVFKINLPESFLERVSFFSEKSYKYKEDLANRIKTEISKAIEDKLAELYKLNSDLTEEDVSLALSDMCLPAMFMPFTNSTGTIYNPRAHQYFHPIGLKNFRLSQAPSIFKLPPIKNNQLSVLNLFEIGNHMQIKHYENDFNNHMNKKALNASESAKIFSVDN 796 The following BLAST results are available for this feature:
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of histone-lysine N-methyltransferase SETD1B-A vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30025052 ID=SMED30025052|Name=histone-lysine N-methyltransferase SETD1B-A|organism=Schmidtea mediterranea sexual|type=transcript|length=2671bpback to top protein sequence of SMED30025052-orf-1 >SMED30025052-orf-1 ID=SMED30025052-orf-1|Name=SMED30025052-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=836bp MSVKFSGQDENIVFEEEINEISKEEENRFSELCSNVINCMVIVQNSQSDLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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