SMED30025045

Overview
NameSMED30025045
Smed IDSMED30025045
Length (bp)1633
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30025045 (SMED30025045) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30025045 (SMED30025045) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30025045 (SMED30025045) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30025045 (SMED30025045) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30025045

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 1

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
pharynxSMED30025045SMESG000069184.1 SMESG000069172.1 dd_Smed_v4_17542_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30025045 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000971:101862..117805 +7505
Homology
[Close]
BLAST of SMED30025045 vs. Planmine SMEST
Match: SMESG000069184.1 (SMESG000069184.1)

HSP 1 Score: 642.114 bits (1655), Expect = 0.000e+0
Identity = 312/319 (97.81%), Postives = 316/319 (99.06%), Query Frame = 3 
Query:  606 EFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQNFQALTNNLKKCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKSCIKYKRPEEKEDENDSIGSTCLFDFIDTEIRIIQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGGLANFTPNELFKN 1562
            EFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQ+FQALTN+LK+CNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRK+CIKYKRPEEKEDENDSIGSTCLFDFIDTEIRI QNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKG LANFTPNEL KN
Sbjct:    4 EFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQSFQALTNDLKQCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKTCIKYKRPEEKEDENDSIGSTCLFDFIDTEIRINQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGSLANFTPNELLKN 322
[Close]
BLAST of SMED30025045 vs. Planmine SMEST
Match: SMESG000069184.1 (SMESG000069184.1)

HSP 1 Score: 623.239 bits (1606), Expect = 0.000e+0
Identity = 302/309 (97.73%), Postives = 306/309 (99.03%), Query Frame = 3 
Query:  606 EFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQNFQALTNNLKKCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKSCIKYKRPEEKEDENDSIGSTCLFDFIDTEIRIIQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGGLA 1532
            EFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQ+FQALTN+LK+CNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRK+CIKYKRPEEKEDENDSIGSTCLFDFIDTEIRI QNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKG L 
Sbjct:    4 EFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQSFQALTNDLKQCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKTCIKYKRPEEKEDENDSIGSTCLFDFIDTEIRINQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGSLV 312
[Close]
BLAST of SMED30025045 vs. Planmine SMEST
Match: SMESG000069184.1 (SMESG000069184.1)

HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0
Identity = 280/287 (97.56%), Postives = 284/287 (98.95%), Query Frame = 3 
Query:  702 MKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQNFQALTNNLKKCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKSCIKYKRPEEKEDENDSIGSTCLFDFIDTEIRIIQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGGLANFTPNELFKN 1562
            MKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQ+FQALTN+LK+CNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRK+CIKYKRPEEKEDENDSIGSTCLFDFIDTEIRI QNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKG LANFTPNEL KN
Sbjct:    1 MKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQSFQALTNDLKQCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKTCIKYKRPEEKEDENDSIGSTCLFDFIDTEIRINQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGSLANFTPNELLKN 287
[Close]
BLAST of SMED30025045 vs. Planmine SMEST
Match: SMESG000069172.1 (SMESG000069172.1)

HSP 1 Score: 207.223 bits (526), Expect = 6.892e-65
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 3 
Query:   45 MKKLNRKESQVSRDFKDTLKNVKRSSQYETKNIFTXXXXXXXXXVLDNFLNGPRKSKTLSTSYKSDATIGDWRSLDSVVISNVDAIINQNEAASQNKNFQEGFNSNANESRPCQ 386
            MKKLNRKESQVSRDFKDTLKNVKRSSQYETKNIFTDSSDISSSIVLDNFLNGPRKSKTLS SYKSDATIGDWRSLDSVVISNVDAIINQNEA SQNKNFQEGFNSNANESRPCQ
Sbjct:    1 MKKLNRKESQVSRDFKDTLKNVKRSSQYETKNIFTDSSDISSSIVLDNFLNGPRKSKTLSASYKSDATIGDWRSLDSVVISNVDAIINQNEAVSQNKNFQEGFNSNANESRPCQ 114
[Close]
BLAST of SMED30025045 vs. Planmine SMEST
Match: SMESG000069206.1 (SMESG000069206.1)

HSP 1 Score: 217.238 bits (552), Expect = 8.184e-64
Identity = 174/523 (33.27%), Postives = 270/523 (51.63%), Query Frame = 3 
Query:   45 MKKLNRKESQVSRDFKDTLKNVKRS--SQYETKNIFTXXXXXXXXXVLDNFLNGPRKSK-TLSTSYKSDATIGDWRSLDSVVISNVDAIINQNEAASQNKNFQEG------FNSNANESRPCQSAITESKNKISNNFFFDRIFSNTPEE--PFEGTDISNLPFILPIIKERKEYLKIRVYKYFTXXXXXXXXXXXXXXEFYAISLYHKNTRLERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEIKLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPESTPNSTEYGKSPGFEISQNFQALTNNLKKCNCHKIRIDAMTCGFLASYGHDFQNHKCLELLDDFGSGLHRKSCIKYK-------------RPEEKEDENDSIGSTCLFDFIDTEIRIIQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLYLYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGGLANFT 1541
            M KL +K+SQVSRDF+++L  V R+    +  KN            V  +  N P  SK ++S + K D     ++++ S          N++ + S   +++           +   S+  Q+ I +   KI   FF   +FSN  +   PFE T +S+L F L I+   +E   I V KYFTI+K+I KI+KK  +++  ISLYH   RLE+ I+L+ Y I   S V++KIL+K      Y K+ +T+ IY+S+ +  +K + SK+I     L+ L++ ++ L N K+ F Y I   S I ++K     +  +     +PGFEI+Q +  +   L+ C+C K RI+A+T G LA       N     ++++F   LH KSC+K K             +  E E    S     L D I+ EI  ++  +   I  +DLE+LC  KNF+ FK FL+DK+GT+CT  S+ +LY Y   LV ++    E    I ++L YI+++F KY+E  II KGGL   T
Sbjct:    1 MSKLKKKKSQVSRDFEESLNVVIRAKFQNFSEKN-----------EVRKDTSNSPIFSKISISDTLKDDLGRISFQTIKS----------NKSSSLSTENSYEMPDIHPFPVPDDTKISKKNQNKIKDHNIKIP--FFIKNLFSNNYDYRIPFETTSVSHLSFSLNIVISEEEQFFISVRKYFTIDKLITKISKKKLLKYDEISLYHNGNRLEKQISLASYEITVKSIVQLKILNKIEIIIQYSKKLFTLLIYSSKTVEYLKTVISKKINIEIYLMNLRFNDVILKNTKELFSYGIENKSVIYVLKLISNDSNLNVPDKIAPGFEIAQQYIDMAEALETCDCRKKRINAITMGILAVLNRTLNNLD-KNIIEEFEKNLHLKSCLKNKNRCSSYSTMSGNSQSFESETSERSSKEISLNDCINAEIGRVEKKKKIVIEESDLEFLCNVKNFKEFKHFLKDKLGTECTLRSVSMLYKYGMELVAYIGSDEEKVSCIKRMLHYIKEFFHKYYETDIINKGGLVALT 499
The following BLAST results are available for this feature:
BLAST of SMED30025045 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30025045 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000069184.10.000e+097.81SMESG000069184.1[more]
SMESG000069184.10.000e+097.73SMESG000069184.1[more]
SMESG000069184.10.000e+097.56SMESG000069184.1[more]
SMESG000069172.16.892e-6598.25SMESG000069172.1[more]
SMESG000069206.18.184e-6433.27SMESG000069206.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30025045 ID=SMED30025045|Name=SMED30025045|organism=Schmidtea mediterranea sexual|type=transcript|length=1633bp
TATATCTTAACTTACGGAGTTTATTCATGAAATACAATTTATAAATGAAA
AAATTAAATCGCAAAGAAAGCCAAGTATCAAGAGATTTTAAAGATACTTT
AAAAAACGTTAAACGTTCATCACAATATGAAACTAAAAATATATTTACTG
ACAGTTCTGATATATCGTCATCTATTGTATTAGACAACTTTCTGAATGGC
CCGAGAAAATCAAAGACTTTGTCCACAAGTTATAAGAGTGATGCAACAAT
AGGCGACTGGAGATCCCTGGACAGCGTAGTTATTAGTAATGTCGATGCTA
TTATAAACCAGAATGAGGCGGCTTCACAAAATAAAAATTTCCAAGAGGGT
TTCAATTCAAATGCCAATGAAAGTCGTCCTTGTCAAAGTGCAATTACTGA
ATCTAAAAATAAAATTTCAAATAATTTCTTTTTCGATAGAATATTTTCAA
ATACACCAGAAGAACCATTCGAAGGAACTGATATTAGTAATCTTCCTTTC
ATTTTACCTATCATTAAAGAAAGAAAAGAATATTTGAAAATTAGAGTTTA
TAAATATTTCACTATTGAAAAGATTATTAAGAAAATAGCGAAGAAAATGT
CTATCGAATTTTATGCAATATCATTATATCATAAGAATACGAGACTGGAG
AGACATATCACTCTCTCTTGGTATAACATTAATTCTAATTCTCACGTCGA
AATGAAAATATTATCAAAACAGAGATACCATGGATTATATATAAAAGAAA
ATTACACAATATTCATTTACACTTCCGAAAAAATTAATGAAATAAAATTA
TTATATTCAAAGGAAATCAAAGAGAATCCAGATTTATTGGAACTAAAATA
TAAAGAGATATTTTTAAATAACTATAAACAATTTTTCTTGTATCTTATTC
CAGAAGATAGTACTATTGAAATAATTAAAAAGAAGCCAGAAAGTACTCCA
AATAGTACAGAATATGGAAAAAGTCCTGGTTTTGAAATTTCTCAAAATTT
CCAAGCTCTGACGAATAATTTGAAGAAATGTAATTGTCACAAAATCAGAA
TTGACGCCATGACATGCGGATTTCTAGCAAGTTATGGTCATGATTTTCAG
AATCACAAATGTTTGGAACTTTTAGACGATTTTGGGTCCGGTTTGCATCG
AAAAAGCTGCATTAAATATAAAAGGCCAGAGGAAAAAGAAGATGAAAATG
ATTCAATTGGTTCAACATGTCTTTTTGATTTTATTGACACCGAAATAAGA
ATAATTCAAAATCACCGTTCGAATCCAATAACTACAACAGATTTGGAATA
TTTATGTTATGCTAAAAACTTTCGAGCTTTTAAGCAATTTCTTCGCGATA
AAATTGGAACGAAGTGCACTAATGCCAGTTTACCATTGCTTTATCTTTAT
GCAAAATCTTTAGTTGATTTTTTGAATTTACGACATGAAACCGATGAAAA
AATAAATAAAATTTTAGATTATATCAGAAAATACTTCGTAAAATATTTCG
AAAAACAAATTATTGCAAAAGGAGGTCTAGCAAATTTCACACCAAACGAA
CTGTTTAAGAACTAAAAATGTCAGATAATTCTTTTTTTATATTTGTTTAA
TTCAAAAGATATATTTTTCTATTAATAAAGATT
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protein sequence of SMED30025045-orf-1

>SMED30025045-orf-1 ID=SMED30025045-orf-1|Name=SMED30025045-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=507bp
MKKLNRKESQVSRDFKDTLKNVKRSSQYETKNIFTDSSDISSSIVLDNFL
NGPRKSKTLSTSYKSDATIGDWRSLDSVVISNVDAIINQNEAASQNKNFQ
EGFNSNANESRPCQSAITESKNKISNNFFFDRIFSNTPEEPFEGTDISNL
PFILPIIKERKEYLKIRVYKYFTIEKIIKKIAKKMSIEFYAISLYHKNTR
LERHITLSWYNINSNSHVEMKILSKQRYHGLYIKENYTIFIYTSEKINEI
KLLYSKEIKENPDLLELKYKEIFLNNYKQFFLYLIPEDSTIEIIKKKPES
TPNSTEYGKSPGFEISQNFQALTNNLKKCNCHKIRIDAMTCGFLASYGHD
FQNHKCLELLDDFGSGLHRKSCIKYKRPEEKEDENDSIGSTCLFDFIDTE
IRIIQNHRSNPITTTDLEYLCYAKNFRAFKQFLRDKIGTKCTNASLPLLY
LYAKSLVDFLNLRHETDEKINKILDYIRKYFVKYFEKQIIAKGGLANFTP
NELFKN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000016pharynx
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 156..223
e-value: 2.8E-6
score: 29.1
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 141..224