Eukaryotic translation initiation factor 3 subunit B

Overview


Name	Eukaryotic translation initiation factor 3 subunit B
Smed ID	SMED30025010
Length (bp)	2075

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Eukaryotic translation initiation factor 3 subunit B (SMED30025010) t-SNE clustered cells

Violin plots show distribution of expression levels for Eukaryotic translation initiation factor 3 subunit B (SMED30025010) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Eukaryotic translation initiation factor 3 subunit B (SMED30025010) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30025010

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 5

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
epidermis	SMED30025010	SMESG000069603.1	dd_Smed_v4_2302_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30025010	SMESG000069603.1	dd_Smed_v4_2302_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30025010	SMESG000069603.1	dd_Smed_v4_2302_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30025010	SMESG000069603.1	Contig49256	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30025010	SMESG000069603.1	Contig49256	uc_Smed_v2	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Human
Match: EIF3B (eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280])

HSP 1 Score: 382.104 bits (980), Expect = 3.300e-121
Identity = 215/634 (33.91%), Postives = 357/634 (56.31%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K +G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+ +IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ K +    +++  +K  R+ +R   DTD L+
Sbjct:  173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDELD 788

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Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K +G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+ +IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ K +    +++  +K  R+ +R   DTD L+
Sbjct:  173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDELD 788

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Human
Match: EIF3B (eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280])

HSP 1 Score: 104.76 bits (260), Expect = 1.342e-25
Identity = 56/146 (38.36%), Postives = 87/146 (59.59%), Query Frame = 3

Query:  366 MNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREF 785
            M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F
Sbjct:    1 MTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGF 146

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Human
Match: EIF3B (eukaryotic translation initiation factor 3 subunit B [Source:HGNC Symbol;Acc:HGNC:3280])

HSP 1 Score: 68.9366 bits (167), Expect = 5.726e-12
Identity = 49/169 (28.99%), Postives = 89/169 (52.66%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIV 563
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V
Sbjct:  134 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYV 301

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Celegans
Match: eif-3.B (Eukaryotic translation initiation factor 3 subunit B [Source:UniProtKB/Swiss-Prot;Acc:Q9XWI6])

HSP 1 Score: 286.574 bits (732), Expect = 3.300e-86
Identity = 188/669 (28.10%), Postives = 326/669 (48.73%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKM-RCENVV---IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLI-HSK---SDITIFEH-SSRDLE-----TKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFL--------VNVWDVVTGTLIREF-IIPKTDEDENQYWPEFRWSFDDRYFA-----------RKQK-DKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVD-NQLRYIGLSAC---LEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKI---MDFGFSTRMTMLKWSPTGQFIA--CSMTNSSFIEFIDGHDGVVLKRVETNNLTDF------VWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTD 1931
            L  KP  ++   N + +AG+P+V   ++ +L+  ++  + R +  V   IP        G +   +     A  A K  NG AFDK+HTF      + +QL   +D W  PE   +    D+  WL   +CRDQ  I H K     + +F +    D E      K  R+++TE++  WSP G+Y++TIH +GI LWGG+ + + +RF HT V+++ FSP E +++TY+    +          + +WDV TG L + F     T   +   WP FRWSFD++YFA           R+QK + IS+++SE   + + + + I  +K F WS    +++Y+    ++ PA   L+ +P+ + + +  + NVA+  + W      LA    R+ KK+  +  +++Y+G   C   ++I+ + +K++ +  +P+SE    +  DW+  G KF  L  N    +  +Y ++ +    K+   +D G       ++++P G ++A    ++    + FID      L   +  N+ +        WDPTGRY ++         +D G    +  GR L  K    L Q  WRPRP   LSE + + IKKN+ K   +F  QD+       ++++E R+K+M  +  ++SR  +     +  RI +R   DT+
Sbjct:   34 LHKKPTIDEFEDNCVFIAGIPVVGADRLGKLQSVLKKVLERLDPAVKLYIPPSPEGGCLGVLLTEWADQRSAQFAVKSLNGYAFDKNHTFTARSFKDMKQLEAPSDHWTTPEKQAYNDVGDLWWWLQNERCRDQFAISHDKLGVPTVGVFTNMKGNDPELAGDADKAERANWTETVFTWSPHGSYLSTIHKQGIILWGGKDYARAHRFAHTNVQYIDFSPCETYLVTYAAPEESNSWGDCEKDSLRIWDVRTGELKKAFSTFELTGRTQLPTWPFFRWSFDEKYFACLKAPEKDKLEREQKINGISIFESEKFELYEGRPVNIENIKQFEWSPTSTVLAYYSECTDAVPAEFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEVKYVG--GCQYHVDIFEIDKKDVSLMNLPLSEP--FIHFDWDPEGDKFCVLVGNTAKATPQVYKIEANSHAPKLVSKLDAG--VHFNEVQFAPKGGWLAVLAKVSAGGNVYFID----TSLSEAKRTNVIEHPLFNKGYWDPTGRYFVTCSTLGGRAGADLGYRIFTFQGRELCRKNLDRLAQFKWRPRPPVKLSEQKQREIKKNLKKTAAKFIKQDDDEKCRASQEVVEKRRKIMAAFDIIRSRNREQLDATRDERISLRNGVDTE 692

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Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKM-RCENVV---IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLI-HSK---SDITIFEH-SSRDLE-----TKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFL--------VNVWDVVTGTLIREF-IIPKTDEDENQYWPEFRWSFDDRYFA-----------RKQK-DKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVD-NQLRYIGLSAC---LEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKI---MDFGFSTRMTMLKWSPTGQFIA--CSMTNSSFIEFIDGHDGVVLKRVETNNLTDF------VWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTD 1931
            L  KP  ++   N + +AG+P+V   ++ +L+  ++  + R +  V   IP        G +   +     A  A K  NG AFDK+HTF      + +QL   +D W  PE   +    D+  WL   +CRDQ  I H K     + +F +    D E      K  R+++TE++  WSP G+Y++TIH +GI LWGG+ + + +RF HT V+++ FSP E +++TY+    +          + +WDV TG L + F     T   +   WP FRWSFD++YFA           R+QK + IS+++SE   + + + + I  +K F WS    +++Y+    ++ PA   L+ +P+ + + +  + NVA+  + W      LA    R+ KK+  +  +++Y+G   C   ++I+ + +K++ +  +P+SE    +  DW+  G KF  L  N    +  +Y ++ +    K+   +D G       ++++P G ++A    ++    + FID      L   +  N+ +        WDPTGRY ++         +D G    +  GR L  K    L Q  WRPRP   LSE + + IKKN+ K   +F  QD+       ++++E R+K+M  +  ++SR  +     +  RI +R   DT+
Sbjct:   34 LHKKPTIDEFEDNCVFIAGIPVVGADRLGKLQSVLKKVLERLDPAVKLYIPPSPEGGCLGVLLTEWADQRSAQFAVKSLNGYAFDKNHTFTARSFKDMKQLEAPSDHWTTPEKQAYNDVGDLWWWLQNERCRDQFAISHDKLGVPTVGVFTNMKGNDPELAGDADKAERANWTETVFTWSPHGSYLSTIHKQGIILWGGKDYARAHRFAHTNVQYIDFSPCETYLVTYAAPEESNSWGDCEKDSLRIWDVRTGELKKAFSTFELTGRTQLPTWPFFRWSFDEKYFACLKAPEKDKLEREQKINGISIFESEKFELYEGRPVNIENIKQFEWSPTSTVLAYYSECTDAVPAEFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEVKYVG--GCQYHVDIFEIDKKDVSLMNLPLSEP--FIHFDWDPEGDKFCVLVGNTAKATPQVYKIEANSHAPKLVSKLDAG--VHFNEVQFAPKGGWLAVLAKVSAGGNVYFID----TSLSEAKRTNVIEHPLFNKGYWDPTGRYFVTCSTLGGRAGADLGYRIFTFQGRELCRKNLDRLAQFKWRPRPPVKLSEQKQREIKKNLKKTAAKFIKQDDDEKCRASQEVVEKRRKIMAAFDIIRSRNREQLDATRDERISLRNGVDTE 692

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Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKM-RCENVV---IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLI-HSK---SDITIFEH-SSRDLE-----TKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFL--------VNVWDVVTGTLIREF-IIPKTDEDENQYWPEFRWSFDDRYFA-----------RKQK-DKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVD-NQLRYIGLSAC---LEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKI---MDFGFSTRMTMLKWSPTGQFIA--CSMTNSSFIEFIDGHDGVVLKRVETNNLTDF------VWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTD 1931
            L  KP  ++   N + +AG+P+V   ++ +L+  ++  + R +  V   IP        G +   +     A  A K  NG AFDK+HTF      + +QL   +D W  PE   +    D+  WL   +CRDQ  I H K     + +F +    D E      K  R+++TE++  WSP G+Y++TIH +GI LWGG+ + + +RF HT V+++ FSP E +++TY+    +          + +WDV TG L + F     T   +   WP FRWSFD++YFA           R+QK + IS+++SE   + + + + I  +K F WS    +++Y+    ++ PA   L+ +P+ + + +  + NVA+  + W      LA    R+ KK+  +  +++Y+G   C   ++I+ + +K++ +  +P+SE    +  DW+  G KF  L  N    +  +Y ++ +    K+   +D G       ++++P G ++A    ++    + FID      L   +  N+ +        WDPTGRY ++         +D G    +  GR L  K    L Q  WRPRP   LSE + + IKKN+ K   +F  QD+       ++++E R+K+M  +  ++SR  +     +  RI +R   DT+
Sbjct:   34 LHKKPTIDEFEDNCVFIAGIPVVGADRLGKLQSVLKKVLERLDPAVKLYIPPSPEGGCLGVLLTEWADQRSAQFAVKSLNGYAFDKNHTFTARSFKDMKQLEAPSDHWTTPEKQAYNDVGDLWWWLQNERCRDQFAISHDKLGVPTVGVFTNMKGNDPELAGDADKAERANWTETVFTWSPHGSYLSTIHKQGIILWGGKDYARAHRFAHTNVQYIDFSPCETYLVTYAAPEESNSWGDCEKDSLRIWDVRTGELKKAFSTFELTGRTQLPTWPFFRWSFDEKYFACLKAPEKDKLEREQKINGISIFESEKFELYEGRPVNIENIKQFEWSPTSTVLAYYSECTDAVPAEFGLLQVPSMQRLRSARVHNVADAQMFWQKSGKRLAFYTMRFKKKEYRETGEVKYVG--GCQYHVDIFEIDKKDVSLMNLPLSEP--FIHFDWDPEGDKFCVLVGNTAKATPQVYKIEANSHAPKLVSKLDAG--VHFNEVQFAPKGGWLAVLAKVSAGGNVYFID----TSLSEAKRTNVIEHPLFNKGYWDPTGRYFVTCSTLGGRAGADLGYRIFTFQGRELCRKNLDRLAQFKWRPRPPVKLSEQKQREIKKNLKKTAAKFIKQDDDEKCRASQEVVEKRRKIMAAFDIIRSRNREQLDATRDERISLRNGVDTE 692

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Celegans
Match: eif-2A (Eukaryotic translation initiation factor 2A [Source:UniProtKB/Swiss-Prot;Acc:Q19052])

HSP 1 Score: 62.003 bits (149), Expect = 9.935e-10
Identity = 92/370 (24.86%), Postives = 147/370 (39.73%), Query Frame = 3

Query:  666 KVRHVLFSPNEKFVMTYSLSNLTFL-----------VNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWS---AKGHLISYWVGEQESTPARI----VLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTN--SSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLM----SYRLSLINESSDCGVTFHSITGRLLMDKPFQGLK---QIIWRP 1694
            + R +LFSP + F++T+    +              V V+ +  G  +  F  PK    E  + P+F  S D+   AR    ++  Y + +    D K +E  G  +F  S   A  H+  Y V    STPAR+    V  S P    V  +T F   +  + WN +   L ++    V K    NQ  Y   S  L +  ++  E  V  +P+ +K  I A  W  NG +FA + +      +  Y+ +       I D     R  +   +     + C   N     +EF D      +  +E  N T F W P G++ +    + RL +     D    F   TGR+L +  F+  K   ++ WRP
Sbjct:   78 RTRKILFSPKDNFLLTFEPWAVYGPKTAENQKPEPNVRVYSLADGKHVSTFSAPK----EASWEPQF--SDDESLAARMVGSEVFFYTNMSFDRYDHKLVE-KGATNFALSPGPAPNHVAVY-VPAVGSTPARVRVHRVSESFPV---VGNRTFFKSDKAVMTWNQRGQSLLILASVEVDKT---NQSYYGEQS--LYLINIQSGESVV--VPLEKKGPIYAAKWNPNGREFA-VCYGYMPAKVTFYNPRGV----PIFDTIEGPRNDVFYNAFGNIVLICGFGNIAKGKMEFWDVETKKEIISIEVPNTTLFDWAPDGQHFVTCTTAPRLRI-----DNSYRFWHYTGRMLAETHFESPKELWEVRWRP 419

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Query:  666 KVRHVLFSPNEKFVMTYSLSNLTFL-----------VNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWS---AKGHLISYWVGEQESTPARI----VLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTN--SSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLM----SYRLSLINESSDCGVTFHSITGRLLMDKPFQGLK---QIIWRP 1694
            + R +LFSP + F++T+    +              V V+ +  G  +  F  PK    E  + P+F  S D+   AR    ++  Y + +    D K +E  G  +F  S   A  H+  Y V    STPAR+    V  S P    V  +T F   +  + WN +   L ++    V K    NQ  Y   S  L +  ++  E  V  +P+ +K  I A  W  NG +FA + +      +  Y+ +       I D     R  +   +     + C   N     +EF D      +  +E  N T F W P G++ +    + RL +     D    F   TGR+L +  F+  K   ++ WRP
Sbjct:   78 RTRKILFSPKDNFLLTFEPWAVYGPKTAENQKPEPNVRVYSLADGKHVSTFSAPK----EASWEPQF--SDDESLAARMVGSEVFFYTNMSFDRYDHKLVE-KGATNFALSPGPAPNHVAVY-VPAVGSTPARVRVHRVSESFPV---VGNRTFFKSDKAVMTWNQRGQSLLILASVEVDKT---NQSYYGEQS--LYLINIQSGESVV--VPLEKKGPIYAAKWNPNGREFA-VCYGYMPAKVTFYNPRGV----PIFDTIEGPRNDVFYNAFGNIVLICGFGNIAKGKMEFWDVETKKEIISIEVPNTTLFDWAPDGQHFVTCTTAPRLRI-----DNSYRFWHYTGRMLAETHFESPKELWEVRWRP 419

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Fly
Match: eIF3b (gene:FBgn0034237 transcript:FBtr0086942)

HSP 1 Score: 340.117 bits (871), Expect = 1.020e-106
Identity = 200/644 (31.06%), Postives = 343/644 (53.26%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLK----KFIRSKMRCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDITIFE--------HSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERY--VKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNSSFIEFIDG-HDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKEQ 1961
            L  +P +   + + ++V  +P V   ++E+LK    K   +     NVV P+D   ++KG+ F+ +     A  A K+ N    DK+HTF   + ++FQ+  N  ++W+ P    ++ Q+D+ +++      DQ  + +++     +            +LET   R  FT++ V WSPLGTY+ T H  G+A+WGG  F ++ +F H   + V FSP E +++TY  +     + +WD+ TG   R F+      D       FRWS DD++ AR  ++ I +Y++ +  ++D KSI+I G++ F+WS   ++I+YWV EQ   PAR+ L+ +P K+E+  K LF+VA+  L W    D+L V  +RY  +KK   D  ++++G+    EI+ ++EKEIPV+ + I E   I+A  WE  G+KF+ +     S+++  Y++   G    ++        T L WSP GQFI  +       EF+D  +D ++    +    ++  WDPTGRY+++  +S      D G   ++  GR++     +   Q +WRPRP  LLSE + K IKKN+ K+   F  +D +      ++L+E R +L E + + +++    ++ +K  RI +R + DTDNLE  +  E+
Sbjct:   45 LAQRPSEADGVESVVVVDNIPKVEPVRLEKLKLVINKLFSNYGEIVNVVYPVDEEGKTKGYAFMEYKQARQAEEAVKKLNNHRLDKNHTFAVNLFTDFQKYENIPEKWEPPTVQTFKVQSDLYNFINDPDTYDQYCVAAETAPNCVQVGFWQNVLPEPFELET---RERFTDTFVKWSPLGTYVVTFHKPGVAIWGGSSFQKIQKFPHPGTQFVEFSPCENYLVTYGPTPTGQKIIIWDIRTGAEKRSFVA-----DGMSVLSMFRWSHDDKFVARMGENSIHIYETPSFYLLDLKSIKIPGIRGFSWSPTDNVIAYWVEEQNQIPARVTLMEIPKKREIRNKNLFHVADCKLHWQKSGDYLCVKVDRYSKLKKDKKDLDVKFLGMFYNFEIFHMREKEIPVDSVEIRE--LILAFAWEPVGNKFSIIHGETNSSNVSFYEV-NKGVKPSLVKRLEKKSCTHLFWSPRGQFIVMANLTMGTFEFVDSTNDYIITASPDHFRASEVEWDPTGRYVVT-GVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEYRNKRIAEWAEQKSRRIMLRGHVDTDNLETDEVDEE 676

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Fly
Match: eIF3b (gene:FBgn0034237 transcript:FBtr0086941)

HSP 1 Score: 340.117 bits (871), Expect = 1.020e-106
Identity = 200/644 (31.06%), Postives = 343/644 (53.26%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLK----KFIRSKMRCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDITIFE--------HSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERY--VKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNSSFIEFIDG-HDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKEQ 1961
            L  +P +   + + ++V  +P V   ++E+LK    K   +     NVV P+D   ++KG+ F+ +     A  A K+ N    DK+HTF   + ++FQ+  N  ++W+ P    ++ Q+D+ +++      DQ  + +++     +            +LET   R  FT++ V WSPLGTY+ T H  G+A+WGG  F ++ +F H   + V FSP E +++TY  +     + +WD+ TG   R F+      D       FRWS DD++ AR  ++ I +Y++ +  ++D KSI+I G++ F+WS   ++I+YWV EQ   PAR+ L+ +P K+E+  K LF+VA+  L W    D+L V  +RY  +KK   D  ++++G+    EI+ ++EKEIPV+ + I E   I+A  WE  G+KF+ +     S+++  Y++   G    ++        T L WSP GQFI  +       EF+D  +D ++    +    ++  WDPTGRY+++  +S      D G   ++  GR++     +   Q +WRPRP  LLSE + K IKKN+ K+   F  +D +      ++L+E R +L E + + +++    ++ +K  RI +R + DTDNLE  +  E+
Sbjct:   45 LAQRPSEADGVESVVVVDNIPKVEPVRLEKLKLVINKLFSNYGEIVNVVYPVDEEGKTKGYAFMEYKQARQAEEAVKKLNNHRLDKNHTFAVNLFTDFQKYENIPEKWEPPTVQTFKVQSDLYNFINDPDTYDQYCVAAETAPNCVQVGFWQNVLPEPFELET---RERFTDTFVKWSPLGTYVVTFHKPGVAIWGGSSFQKIQKFPHPGTQFVEFSPCENYLVTYGPTPTGQKIIIWDIRTGAEKRSFVA-----DGMSVLSMFRWSHDDKFVARMGENSIHIYETPSFYLLDLKSIKIPGIRGFSWSPTDNVIAYWVEEQNQIPARVTLMEIPKKREIRNKNLFHVADCKLHWQKSGDYLCVKVDRYSKLKKDKKDLDVKFLGMFYNFEIFHMREKEIPVDSVEIRE--LILAFAWEPVGNKFSIIHGETNSSNVSFYEV-NKGVKPSLVKRLEKKSCTHLFWSPRGQFIVMANLTMGTFEFVDSTNDYIITASPDHFRASEVEWDPTGRYVVT-GVSSWKVKEDTGFNMYTFQGRIIKRTILKNFVQFLWRPRPPTLLSEEKQKEIKKNLKKYYAAFEQKDRLRLTRASKELLEKRSQLRETFMEYRNKRIAEWAEQKSRRIMLRGHVDTDNLETDEVDEE 676

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Zebrafish
Match: eif3ba (eukaryotic translation initiation factor 3, subunit Ba [Source:ZFIN;Acc:ZDB-GENE-030131-2748])

HSP 1 Score: 358.607 bits (919), Expect = 7.281e-114
Identity = 211/634 (33.28%), Postives = 352/634 (55.52%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  KP +   I + ++V  +P V   ++E+LK  I    SK  +  N   P DA+ ++KG+IF+ +     A  A K  +G   DK HTFR  + ++F + M+  DEW+ PE   ++   ++  W+    CRDQ  ++  S     IF +  ++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++V+T+S      +    + +WDV+TG   R F       + + +WP F+WS D ++FAR  +D +S+Y++ +  +++KKS++I G+KDF+WS   ++I++WV E +  PAR+ L+  P++ E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + +  K  I+A  WE NGSKFA L       +   Y +K++G+   I  F    +   + WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGR++++  +S  +   D      +  GRLL     +   Q++WRPRP  LL++ +IK IKK++ K+++ F  +D +  ++  ++L++ R+ +MEE+ K + R   M+  ++P R+ +R   DTD L+
Sbjct:   41 LRDKPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNEFYP-DADGKTKGYIFLEYSAPSHAHEAVKNADGYKLDKQHTFRVNLFTDFDKYMSICDEWEAPEKQPFKDFGNLRHWMEDPDCRDQYSVIYDSGERTGIFANDVKEPIEVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYVVTFSPLMDTKDDPQAIIIWDVLTGQKKRGFHC-----ESSAHWPIFKWSPDGKFFARMTQDMLSIYETPSMGLLEKKSLKINGIKDFSWSPGDNIIAFWVPEDKDIPARVTLMQFPSRNEMRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEM--KDSIIAFAWEPNGSKFAVLHGESPRINSSFYHVKSNGKIDLIKMFD-KQQANSIFWSPQGQFLVLAGLRSMNGALAFVDTSDCTMMNIAEHYMASDVEWDPTGRFVVT-SVSWWSHKVDNAFWLWTFQGRLLQKNNKERFCQLLWRPRPPSLLTQEQIKLIKKDLKKYSKIFEQKDRLSQSKASKELVDKRRTMMEEYRKHRKRAMDMYQEQRPLRLELRGGVDTDELD 656

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Zebrafish
Match: eif3bb (eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175])

HSP 1 Score: 356.681 bits (914), Expect = 2.922e-113
Identity = 204/611 (33.39%), Postives = 339/611 (55.48%), Query Frame = 3

Query:  144 PESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            PE ++E+LK  I    SK  +  N   P +A   +KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + MN +D W+ PE   ++   +M  WL    CRDQ  ++  S     IF +  ++      R+ +TE+ V WSP G ++ T H +GIALWGGEKF Q+ RF H  V  + FSP E++V+T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR  +D +S+Y++ +  ++DKKS++I G+KDF+WS   ++I++WV E +  PAR+ L+  P++ E+  + LFNV +  L W  Q D+L V  +R  +           G+    EI+R++EK++PV+ + + E   I+A  WE NGS+FA L       +   Y +K++G+ + I  F    +   + WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+ +IK IKK++ K+++ F  +D +  ++  ++L++ R+ +MEE+ + K    Q++S ++  R+ +R   DTD L+
Sbjct:   51 PE-RLEKLKNVIHKIFSKFGKITNEFYP-EAAGTTKGYIFLEYASPNQALEAVKSADGYKLDKQHTFRVNLFTDFDKYMNISDLWETPEKQPFKDFGNMRHWLEDPDCRDQYSVIYESGERTAIFSNDPKEPILVEERARWTETYVRWSPKGDHL-TFHQRGIALWGGEKFKQIQRFSHQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHC-----ESSAHWPIFKWSQDGKFFARMTQDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGDNIIAFWVPEDKDIPARVTLMHFPSRSEIRVRNLFNVVDCKLHWQRQGDYLCVKVDRTPRGTQ--------GVVTNFEIFRMREKQVPVDVVEMKE--SIIAFAWEPNGSRFAVLHGESPRINASFYHVKSNGKIELIKMFD-KQQANSIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTIMYIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKAIKKDLKKYSKIFEQKDRLSQSKASKELVDKRRLMMEEYRRYKDSAIQLYSQQRELRLQLRGGVDTDELD 641

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Zebrafish
Match: eif3bb (eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175])

HSP 1 Score: 338.961 bits (868), Expect = 1.073e-106
Identity = 201/634 (31.70%), Postives = 339/634 (53.47%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P +A   +KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + MN +D W+ PE   ++   +M  WL    CRDQ  ++  S     IF +  ++      R+     +           T H +GIALWGGEKF Q+ RF H  V  + FSP E++V+T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR  +D +S+Y++ +  ++DKKS++I G+KDF+WS   ++I++WV E +  PAR+ L+  P++ E+  + LFNV +  L W  Q D+L V  +R  +           G+    EI+R++EK++PV+ + + E   I+A  WE NGS+FA L       +   Y +K++G+ + I  F    +   + WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+ +IK IKK++ K+++ F  +D +  ++  ++L++ R+ +MEE+ + K    Q++S ++  R+ +R   DTD L+
Sbjct:    7 LRDRPLEADGIDSVVVVDNVPQVGPERLEKLKNVIHKIFSKFGKITNEFYP-EAAGTTKGYIFLEYASPNQALEAVKSADGYKLDKQHTFRVNLFTDFDKYMNISDLWETPEKQPFKDFGNMRHWLEDPDCRDQYSVIYESGERTAIFSNDPKEPILVEERAALDRDLCPLVSQRRPPLTFHQRGIALWGGEKFKQIQRFSHQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHC-----ESSAHWPIFKWSQDGKFFARMTQDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGDNIIAFWVPEDKDIPARVTLMHFPSRSEIRVRNLFNVVDCKLHWQRQGDYLCVKVDRTPRGTQ--------GVVTNFEIFRMREKQVPVDVVEMKE--SIIAFAWEPNGSRFAVLHGESPRINASFYHVKSNGKIELIKMFD-KQQANSIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTIMYIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKAIKKDLKKYSKIFEQKDRLSQSKASKELVDKRRLMMEEYRRYKDSAIQLYSQQRELRLQLRGGVDTDELD 622

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Xenopus
Match: rsph3 (radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-989659])

HSP 1 Score: 366.696 bits (940), Expect = 9.648e-117
Identity = 199/582 (34.19%), Postives = 327/582 (56.19%), Query Frame = 3

Query:  219 DANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSDIT-IFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            +A   ++G+IF+ +     A  A K  +    DK HTFR  + ++F + M   DEW+ PE   ++   ++ SWL    CRDQ  +I+   D T IF    ++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LP+++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + +  K  I+A  WE NGSKFA L       S+  Y +K +G+ + I  +      T+  WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +MEE+   +   ++++  +K  R+ +R   DTD L+
Sbjct:   90 EAEGTTRGYIFLEYALPTQAQDAVKNADCYKLDKQHTFRVNLFTDFDKYMVIGDEWEAPEKQPFKDFGNLRSWLEDPDCRDQFSVIYESGDRTSIFWTDVKEPVPVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTKEEPQAIIIWDILTGQNKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKITGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEM--KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVKNNGKIELIKMYDKQQANTIF-WSPQGQFLVLAGLRSMNGALAFVDTSDCTIMNIAEHYTASDVEWDPTGRYVVT-SVSWWSHKVDNAYWMWTFQGRLLQKNNKDRFCQLLWRPRPPSLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELIERRRAMMEEYKTYREMAAKLYMEQKAARLEIRGGVDTDELD 654

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Xenopus
Match: rsph3 (radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-989659])

HSP 1 Score: 366.696 bits (940), Expect = 1.101e-116
Identity = 199/582 (34.19%), Postives = 327/582 (56.19%), Query Frame = 3

Query:  219 DANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSDIT-IFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            +A   ++G+IF+ +     A  A K  +    DK HTFR  + ++F + M   DEW+ PE   ++   ++ SWL    CRDQ  +I+   D T IF    ++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LP+++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + +  K  I+A  WE NGSKFA L       S+  Y +K +G+ + I  +      T+  WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +MEE+   +   ++++  +K  R+ +R   DTD L+
Sbjct:  106 EAEGTTRGYIFLEYALPTQAQDAVKNADCYKLDKQHTFRVNLFTDFDKYMVIGDEWEAPEKQPFKDFGNLRSWLEDPDCRDQFSVIYESGDRTSIFWTDVKEPVPVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTKEEPQAIIIWDILTGQNKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKITGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEM--KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVKNNGKIELIKMYDKQQANTIF-WSPQGQFLVLAGLRSMNGALAFVDTSDCTIMNIAEHYTASDVEWDPTGRYVVT-SVSWWSHKVDNAYWMWTFQGRLLQKNNKDRFCQLLWRPRPPSLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELIERRRAMMEEYKTYREMAAKLYMEQKAARLEIRGGVDTDELD 670

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Xenopus
Match: rsph3 (radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-989659])

HSP 1 Score: 365.925 bits (938), Expect = 1.831e-116
Identity = 199/582 (34.19%), Postives = 327/582 (56.19%), Query Frame = 3

Query:  219 DANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSDIT-IFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            +A   ++G+IF+ +     A  A K  +    DK HTFR  + ++F + M   DEW+ PE   ++   ++ SWL    CRDQ  +I+   D T IF    ++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LP+++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + +  K  I+A  WE NGSKFA L       S+  Y +K +G+ + I  +      T+  WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +MEE+   +   ++++  +K  R+ +R   DTD L+
Sbjct:   98 EAEGTTRGYIFLEYALPTQAQDAVKNADCYKLDKQHTFRVNLFTDFDKYMVIGDEWEAPEKQPFKDFGNLRSWLEDPDCRDQFSVIYESGDRTSIFWTDVKEPVPVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTKEEPQAIIIWDILTGQNKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKITGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEM--KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVKNNGKIELIKMYDKQQANTIF-WSPQGQFLVLAGLRSMNGALAFVDTSDCTIMNIAEHYTASDVEWDPTGRYVVT-SVSWWSHKVDNAYWMWTFQGRLLQKNNKDRFCQLLWRPRPPSLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELIERRRAMMEEYKTYREMAAKLYMEQKAARLEIRGGVDTDELD 662

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Xenopus
Match: rsph3 (radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-989659])

HSP 1 Score: 357.451 bits (916), Expect = 1.361e-113
Identity = 197/582 (33.85%), Postives = 325/582 (55.84%), Query Frame = 3

Query:  219 DANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSDIT-IFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            +A   ++G+IF+ +     A  A K  +    DK HTFR  + ++F + M   DEW+ PE   ++   ++ SWL    CRDQ  +I+   D T IF    ++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LP+++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + +  K  I+A  WE NGSKFA L       S+  Y +K +G+ + I  +      T+  WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++   IKK++ K+++ F  +D +  ++  ++L+E R+ +MEE+   +   ++++  +K  R+ +R   DTD L+
Sbjct:   67 EAEGTTRGYIFLEYALPTQAQDAVKNADCYKLDKQHTFRVNLFTDFDKYMVIGDEWEAPEKQPFKDFGNLRSWLEDPDCRDQFSVIYESGDRTSIFWTDVKEPVPVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTKEEPQAIIIWDILTGQNKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKITGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPSRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEM--KDGIIAFAWEPNGSKFAVLHGEVPRISVSFYHVKNNGKIELIKMYDKQQANTIF-WSPQGQFLVLAGLRSMNGALAFVDTSDCTIMNIAEHYTASDVEWDPTGRYVVT-SVSWWSHKVDNAYWMWTFQGRLLQKNNKDRFCQLLWRPRPPSLLSQDQ---IKKDLKKYSKIFEQKDRLSQSKASKELIERRRAMMEEYKTYREMAAKLYMEQKAARLEIRGGVDTDELD 628

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Mouse
Match: Eif3b (eukaryotic translation initiation factor 3, subunit B [Source:MGI Symbol;Acc:MGI:106478])

HSP 1 Score: 380.178 bits (975), Expect = 1.090e-120
Identity = 213/634 (33.60%), Postives = 359/634 (56.62%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGG+KF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K++G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ + +    +++  +K  R+ +R   DTD L+
Sbjct:  162 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKIINDYYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKSNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRQYRKMAQELYMKQKNERLELRGGVDTDELD 777

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Mouse
Match: Eif3b (eukaryotic translation initiation factor 3, subunit B [Source:MGI Symbol;Acc:MGI:106478])

HSP 1 Score: 91.6633 bits (226), Expect = 5.305e-21
Identity = 46/148 (31.08%), Postives = 84/148 (56.76%), Query Frame = 3

Query: 1497 DGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ + +    +++  +K  R+ +R   DTD L+
Sbjct:    3 DCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRQYRKMAQELYMKQKNERLELRGGVDTDELD 149

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
Match: sp|A7MB16|EIF3B_BOVIN (Eukaryotic translation initiation factor 3 subunit B OS=Bos taurus OX=9913 GN=EIF3B PE=2 SV=1)

HSP 1 Score: 385.571 bits (989), Expect = 4.620e-122
Identity = 215/634 (33.91%), Postives = 358/634 (56.47%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K +G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ K +    +++  +K  R+ +R   DTD L+
Sbjct:  145 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYP-EEDGRTKGYIFLEYASPAHALDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGQKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNSKDRFCQLLWRPRPPTLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNARLELRGGVDTDELD 760

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
Match: sp|P55884|EIF3B_HUMAN (Eukaryotic translation initiation factor 3 subunit B OS=Homo sapiens OX=9606 GN=EIF3B PE=1 SV=3)

HSP 1 Score: 382.104 bits (980), Expect = 1.585e-120
Identity = 215/634 (33.91%), Postives = 357/634 (56.31%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K +G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+ +IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ K +    +++  +K  R+ +R   DTD L+
Sbjct:  173 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKNNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQEQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRKYRKMAQELYMEQKNERLELRGGVDTDELD 788

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
Match: sp|Q1HDZ5|EIF3B_BOMMO (Eukaryotic translation initiation factor 3 subunit B OS=Bombyx mori OX=7091 GN=eIF3-S9 PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 2.623e-120
Identity = 217/631 (34.39%), Postives = 346/631 (54.83%), Query Frame = 3

Query:   84 KPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDIT--IFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVW---DVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACS---MTNSSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            KP +     N ++V G P V   ++E+L+  I    SK  +  N   P   N  + G+IF+ +   + A  A K  N    DK HTF   + ++FQ+  +   EW+ P P  ++ Q+D+  +L+     DQ L+   + +   +++++  +      R ++TE+  +WSPLGTY+AT H +G+ALW G KF Q  +F H + R + FSP E +++T+S S        W   D+ TG   R F  P    DE   WP FRWS DDR+FAR   D +SVY++    ++DKKSI+I G++DF+WS   + ++YWV E +  PAR+ L+ +P + EV +K LF+VA+  + W    D+L V  +RY K K     ++Y G+    EI+ ++EKEIPV+ + I E  Q  A  WE  GSKF+ +  +  + SI  Y + T GQ   ++          L WSP+GQFI  +   +T  + +EF+D +D  ++   +   ++   WDPTGRY+++  +S +    DCG    S  G++L     +G  Q  WRPRP  LLSE + K IKKN+ K+  QF  +D M S++  ++L+  R + M+++ + +    Q ++ +KP R+ +R   DTD L+
Sbjct:   51 KPKESDGYENVVVVDGCPQVGPERLEKLQSVINKIFSKFGKIVNEYYPTTENGLTTGYIFLEYSNPQNAAEAVKATNNCKLDKQHTFLVNLFTDFQKYSDIPKEWEPPAPQPFKVQSDLQWYLMDPDAYDQFLVGIGTGVALQVWQNALPEPLLLQERPNWTETYAVWSPLGTYLATFHWRGVALWAGPKFSQFQKFFHPEARFISFSPCENYMVTFSPSGDRGDDKKWIIGDIRTGQEKRSFPPP----DEYVTWPIFRWSKDDRFFARIGADVLSVYETPGFGLLDKKSIKIPGIRDFSWSPSDNTLAYWVAEDKDVPARVTLLEIPNRTEVRSKNLFSVADCKIHWQKSGDYLCVKVDRYSKVKKDKIDIKYSGMYYNFEIFHMREKEIPVDSVEIKEPIQAFA--WEPVGSKFSIIHGDPANISISFYQVNT-GQAPTLLKKFERKPFNHLFWSPSGQFIVLANLGLTGGA-LEFLDTNDFTIMNVADHYQMSGIEWDPTGRYVVT-GVSSLKCKMDCGYYIWSFQGKILRRVMKEGFAQFHWRPRPPTLLSEKQQKEIKKNLKKYYSQFESKDRMRSSKASKELVAKRTEQMKKFTEYRESKIQEWNEQKPRRLELRDYVDTDGLD 672

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
Match: sp|Q4G061|EIF3B_RAT (Eukaryotic translation initiation factor 3 subunit B OS=Rattus norvegicus OX=10116 GN=Eif3b PE=1 SV=1)

HSP 1 Score: 380.563 bits (976), Expect = 4.297e-120
Identity = 213/634 (33.60%), Postives = 359/634 (56.62%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGG+KF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K++G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ + +    +++  +K  R+ +R   DTD L+
Sbjct:  156 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKIINDYYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKSNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRQYRKMAQELYMKQKNERLELRGGVDTDELD 771

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
Match: sp|Q8JZQ9|EIF3B_MOUSE (Eukaryotic translation initiation factor 3 subunit B OS=Mus musculus OX=10090 GN=Eif3b PE=1 SV=1)

HSP 1 Score: 380.178 bits (975), Expect = 7.626e-120
Identity = 213/634 (33.60%), Postives = 359/634 (56.62%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIR---SKM-RCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  +P +   I + ++V  +P V   ++E+LK  I    SK  +  N   P + + ++KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + M  +DEW  PE   ++   ++  WL + +CRDQ  ++  S    +IF +  +D  +   R+ +TE+ V WSP GTY+AT H +GIALWGG+KF Q+ RF H  V+ + FSP E++++T+S      +    + +WD++TG   R F       + + +WP F+WS D ++FAR   D +S+Y++ +  ++DKKS++I G+KDF+WS  G++I++WV E +  PAR+ L+ LPT++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       S+  Y +K++G+ + I  F      T+  WSP GQF+  +   S    + F+D  D  V+   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS+++IK IKK++ K+++ F  +D +  ++  ++L+E R+ +ME++ + +    +++  +K  R+ +R   DTD L+
Sbjct:  162 LKDRPQEADGIDSVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKIINDYYP-EEDGKTKGYIFLEYASPAHAVDAVKNADGYKLDKQHTFRVNLFTDFDKYMTISDEWDIPEKQPFKDLGNLRYWLEEAECRDQYSVIFESGDRTSIFWNDVKDPVSIEERARWTETYVRWSPKGTYLATFHQRGIALWGGDKFKQIQRFSHQGVQLIDFSPCERYLVTFSPLMDTQDDPQAIIIWDILTGHKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTLDTLSIYETPSMGLLDKKSLKISGIKDFSWSPGGNIIAFWVPEDKDIPARVTLMQLPTRQEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKET--IIAFAWEPNGSKFAVLHGEAPRISVSFYHVKSNGKIELIKMFDKQQANTIF-WSPQGQFVVLAGLRSMNGALAFVDTSDCTVMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWLWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSQDQIKQIKKDLKKYSKIFEQKDRLSQSKASKELVERRRTMMEDFRQYRKMAQELYMKQKNERLELRGGVDTDELD 777

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
Match: A0A4E0RFT7 (Eukaryotic translation initiation factor 3 subunit B OS=Fasciola hepatica OX=6192 GN=D915_003391 PE=3 SV=1)

HSP 1 Score: 425.631 bits (1093), Expect = 2.284e-136
Identity = 239/653 (36.60%), Postives = 385/653 (58.96%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVV----IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSDI-TIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFL-----------VNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDN--QLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFL-TFNQKSTSILIYDLKTSGQTQKIMDFGFS-TRMTMLKWSPTGQ-FIACSMTNS-SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE-HGKCKEQ 1961
            L  KP  E ++G+ ++V G P+V  +K + LKKF+  K      +     P+D   Q+KG++F+T+   + A  A +  N    DKSHT +  +L ++++L +   EWK P    ++   ++ SWLL   CRDQ  L+++  +I +++ H++ +      R+ +TE  + WSP GTY+AT+H  G  LW GEKF ++ RF H  V+ + FSP E+F+++ S S  + +           V +WDV      REF +P       + +P F+WS++D YFA  ++  + +Y++E   ++DKK I    ++DF+WS   ++++YWV E ++TPAR+VL+ +P+++EV  K LF+VAEI L W+ Q DFLAV   R  KKK VDN  Q++Y+G    LEI R++EK  PV+++ +  K  I    WE  G++FAFL T +    S+ IYD+      +++     S  +   LKWSP G   +   + N+  ++EFI  +DG+ L   +   +++  WDPTGRYL S  +S   + +D GV F +  GR L   P  GL+   WRPRP  LLS  +++NIKKNM+K+N  FA++D+M++++  R+L+E RQ+L+ E++  K+ I + + +EK  RI +R  TDTDNL   G+ +E+
Sbjct:   19 LAAKPTPEDHLGSTIIVDGCPVVGPAKFDLLKKFLLDKFAKVGPISDHHFPVDDEKQTKGYMFITYENGKAASQAVRTLNSTPLDKSHTLQVNLLGDYERLTSVPTEWKPPPKQEYKDYGNLKSWLLNELCRDQFALVYNDGEIGSVYWHNAVEPTIAVERNRWTEGWMRWSPRGTYLATMHQPGAILWVGEKFQRLGRFPHQGVKMIDFSPMERFMVSLSPSAQSSVTGEDQDRPMADVIIWDVQRCVSRREFTVPV------ESYPAFKWSYNDAYFACLREGYVVIYETETFRLLDKKRIGGGNIRDFSWSPTENILAYWVPESDNTPARVVLLEVPSRQEVCTKNLFSVAEICLTWHEQGDFLAVQVLRCAKKK-VDNDKQVKYMGTYMNLEIVRMREKLYPVDQLGV--KASITCFQWEPYGTRFAFLQTVSSGRFSVAIYDVPRGNSIREVATLEISAAKQNDLKWSPKGNMLVVAGLKNADGYLEFISANDGISLANGDHPMVSEIHWDPTGRYL-STVVSNFYQKNDNGVWFWNSVGRCLYKMPLNGLRSFAWRPRPPSLLSPEQLQNIKKNMSKYNTHFANEDKMLASKASRELLEKRQRLLSEFSAWKNAIIKQYQSEKAERIELR-GTDTDNLTMDGQTEEE 660

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
Match: A0A504Z2A0 (Eukaryotic translation initiation factor 3 subunit B OS=Fasciola gigantica OX=46835 GN=FGIG_00093 PE=3 SV=1)

HSP 1 Score: 419.853 bits (1078), Expect = 4.286e-134
Identity = 240/660 (36.36%), Postives = 385/660 (58.33%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVV----IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSDI-TIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFL-----------VNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDN--QLRYI-------GLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFL-TFNQKSTSILIYDLKTSGQTQKIMDFGFS-TRMTMLKWSPTGQ-FIACSMTNS-SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE-HGKCKEQ 1961
            L  KP  E ++G+ ++V G P+V  +K + LKKF+  K      +     P+D   Q+KG++F+T+   + A  A +  N    DKSHT +  +L ++++L +   EWK P    ++   ++ SWLL   CRDQ  L+++  +I +++ H++ +      R+ +TE  + WSP GTY+AT+H  G  LW GEKF ++ RF H  V+ + FSP E+F+++ S S  + +           V +WDV      REF +P       + +P F+WS++D YFA  ++  + VY++E   ++DKK I    ++DF+WS   ++++YWV E ++TPAR+VL+ +P+++EV  K LF+VAEI L W+ Q DFLAV   R  KKK VDN  Q++Y+       G    LEI R++EK  PV+++ +  K  I    WE  G++FAFL T +    S+ IYD+      +++     S  +   LKWSP G   +   + N+  ++EFI  +DG+ L   +   +++  WDPTGRYL S  +S   + +D GV F +  GR L   P  GL+   WRPRP  LLS  +++NIKKNM+K+N  FA++D+M++++  R+L+E RQ+L+ E++  K+ I + + +EK  RI +R  TDTDNL   G+ +E+
Sbjct:   19 LAAKPTPEDHLGSTIIVDGCPVVGPAKFDLLKKFLLDKFAKVGPISDHHFPVDDEKQTKGYMFITYENGKAASQAVRTLNSTPLDKSHTLQVNLLGDYERLTSVPTEWKPPPKQEYKDYGNLKSWLLNELCRDQFALVYNDGEIGSVYWHNAVEPTVAVERNRWTEGWMRWSPRGTYLATMHQPGAILWVGEKFQRLGRFPHQGVKMIDFSPMERFMVSLSPSAQSSVTGEDQDRPMADVVIWDVQRCVSRREFTVPV------ESYPAFKWSYNDAYFACLREGYVVVYETETFRLLDKKRIGGGNIRDFSWSPTENILAYWVPESDNTPARVVLLEIPSRQEVCTKNLFSVAEICLTWHEQGDFLAVQVLRCAKKK-VDNDKQVKYMASANLSPGTYMNLEIVRMREKLYPVDQLGV--KASITCFQWEPYGTRFAFLQTVSSGRFSVAIYDVPRGNSIREVATLEISAAKQNDLKWSPKGNMLVVAGLKNADGYLEFISANDGISLANGDHPMVSEIHWDPTGRYL-STVVSNFYQKNDNGVWFWNSVGRCLYKMPLNGLRSFAWRPRPPSLLSPEQLQNIKKNMSKYNTHFANEDKMLASKASRELLEKRQRLLSEFSAWKNAIIKQYQSEKAERIELR-GTDTDNLTVDGQTEEE 667

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
Match: A0A1S3JF76 (Eukaryotic translation initiation factor 3 subunit B OS=Lingula unguis OX=7574 GN=LOC106172404 PE=3 SV=1)

HSP 1 Score: 411.764 bits (1057), Expect = 1.401e-130
Identity = 228/638 (35.74%), Postives = 365/638 (57.21%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKM-RCENVV---IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS-----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQ-LRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQ--KIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            L  KP +   + + ++V  +P V + ++E+L+  IR    +  N+V    P D + ++KG+IF+ + +   A  A K  NG   DK HTF   ++S+F + +N ++EW+ PE   ++   ++  WLL  +CRDQ  ++        I+ ++  +      R  +TE+ V WSPLGTY+AT+H KGIALWGGEKF Q+ RF H  V+ + FSP E +V+T+S       + T ++ +WD  TG   R F      +     WP F+WS D +YFAR   D +SVY++ +  ++ KKSI++ G+KDF+WS   ++I+Y+V E++  PAR+VL  +P++ E+  K LF+VA+  + W    D+L V  +RY KKK    Q ++Y+G++   E++R++EKEIPV+ +   E T   A  WE NG +FAF+       S   Y ++ SG+ +  K MD         + WSP GQF+  +   S    +EFID  D  V+ +VE    +D  WDP+GRY++S  +S      D      +  GRLL   P +   Q +WRPRP  LL+   IK+IKKNM K++ QF  +D M  ++  ++L+E R+K+ +++ K ++++ ++  N+K  R+ +R   DTD LE
Sbjct:   56 LRQKPREADGVESVIVVDNIPQVGQERLEKLQNVIRKIFSKFGNIVNENYPTDESGKTKGYIFLEYSSPANAAEAVKMANGYKLDKQHTFLVNLVSDFDRYVNVSEEWEPPEQQPFKDPGNLHQWLLDAECRDQYSVIYEGGEKTAIYLNTPGEPTCLDERVRWTETYVRWSPLGTYLATLHQKGIALWGGEKFKQIMRFSHPGVQLIDFSPCESYVVTFSPLPGDREDPTAII-IWDARTGQKKRGFHCESASQ-----WPVFKWSHDGKYFARMSHDTLSVYETPSFGLLGKKSIKVSGIKDFSWSPSDNIIAYFVPEEKDVPARVVLTEMPSRGELQTKNLFHVADCRMHWQKSGDYLCVKVDRYAKKKEDKEQGMKYVGITYYFELFRMREKEIPVDHLECKENTLAFA--WEPNGHRFAFIHGESPRISASFYIMRPSGKVELLKTMD---KQSANHIFWSPNGQFVVLAGLRSMNGTMEFIDTSDMTVMNQVEHYMASDVEWDPSGRYVVS-AVSWWAHKVDNAYWMWNFQGRLLSKHPLERFCQFLWRPRPPSLLTPEMIKDIKKNMKKYSTQFELKDRMTQSKASKELIERRRKMCDDFNKYRAKLQEVVRNQKQERLALRDGIDTDELE 681

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
Match: A0A4Y7LQQ4 (Eukaryotic translation initiation factor 3 subunit B OS=Eubosmina coregoni OX=186181 GN=EOG090X01UY PE=2 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 8.463e-130
Identity = 223/630 (35.40%), Postives = 366/630 (58.10%), Query Frame = 3

Query:   84 KPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMR----CENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSD-ITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS------LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFI--ACSMTNSSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTD 1931
            +P +   + + ++V G+P V   ++E+L+  +R   +     +N   PL+A+  +KG++FV + +   A+   K  NG  FDK+HTF   +L++F++  N  ++W+ P P  +R Q  +  +LL+    DQ  +++ + D + ++ +S  +      R  +TE++V WSPLGTY++T H KGIALWGGEKF Q+ RF H  V+ + FSP E++++++S       ++    + +WDV+TG   R F     + D++Q  P F+WS DD++FAR   D +SVY++ +  +++KKSI++ G++DF WS   + I+YWVGE++ TPAR+ L+ +P++ EV  K LF+VA+  + W    D+L V  +RY K +   + ++Y G+   LE++ ++EK+IPV+ + I E     A  WE  GSKFA +     STS+  Y++KT GQT  +           L W+P+GQFI  A     S  +EFID HD  V+   E    TD  WDPTGRY+ +  +S      D      S  GR+L         Q+ WRPRP  LL   +IK+IKK++ K++ QF  +D +  ++  ++L+E R+KLM+++  ++SR    +  ++  RI +R N DTD
Sbjct:   55 RPKETDGVESIVVVDGVPQVGADRIEKLQNVLRKLFQKFGNIKNEFYPLNADGSTKGYVFVEYGSAAEALEVLKGTNGYKFDKNHTFTVNLLTDFEKYDNILEKWENPTPQPFREQGCLQYYLLEPDACDQFSVVYEQGDKVAVYSNSQPEPALLEERPRWTETLVRWSPLGTYLSTFHAKGIALWGGEKFQQIMRFSHPGVQFIDFSPCERYMVSFSPLADSKATDEPQAIIIWDVLTGLKKRAF-----NADKSQALPIFKWSHDDKFFARMGPDMLSVYETPSFGLLEKKSIKVQGIRDFAWSPTDNTIAYWVGEEKDTPARVTLLEIPSRNEVRVKNLFSVADCKMYWQKSGDYLCVKVDRYAKIRKDKSDIKYSGIYYNLEVFHMREKQIPVDSVEIKETVHSFA--WEPVGSKFAVIHGEPPSTSVSFYEVKT-GQTPTLAKKYERKACNQLYWAPSGQFIVLAGLRAMSGTLEFIDTHDFTVMNTGEHFMATDVEWDPTGRYVAT-AVSWWGHKVDNAYWLWSFQGRILKRVALDKFCQLQWRPRPPTLLQPQQIKDIKKSLKKYSAQFEVKDRLKMSKASKELVEKRRKLMQDYEDLRSRKQNEYEEQRHRRIELRNNVDTD 675

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
Match: A0A5J4P113 (Eukaryotic translation initiation factor 3 subunit B OS=Paragonimus westermani OX=34504 GN=DEA37_0001141 PE=3 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 1.594e-129
Identity = 225/641 (35.10%), Postives = 374/641 (58.35%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVV----IPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ-LLIHSKSDI-TIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFL---------VNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDN--QLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFL-TFNQKSTSILIYDLKTSGQTQKIMDFGF-STRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDN 1934
            L  KP  + ++G+ ++V G PIV  +K E LKKF+  K      +     P D + Q+KG+IF+T+ T + A  A +  +    DK+H F+  +L ++++L+N + EWK P    +    ++ SWLL   CRDQ +++H   ++  ++ HS+ +      R  +TE  + WSP GTY+AT+H +G+ +WGG++F ++ RF H  V+ + FSP E+F+++ S S    +         V  WDV+     REF IP          P F+WS++D YFA  +   + +Y++    ++DKK +    ++DF+WS   ++++YWV E ++TPAR+VL+++P+++E+  K LF+VAEI L W+ Q DFLAV   R  KKK +DN  Q++Y+G    LEI R++EK  PV+++ I  K  +    WE +G++FAF+ T      S++IYD+      ++++     S R   L+WSP G F+  +   S  S++EFI  ++ V L + +   +++  WDPTGRYL +  +S  ++ +D G+ F +  GR L   P  GL+   WRPRP  LLS  +++ +KKNM K+N  FA++D M++++  R+L+E RQ+++ E+   K  I Q +  E+  RI +R   D D+
Sbjct:   19 LAQKPEPDDHLGSTVIVDGCPIVGPAKFELLKKFLLEKFSKIGPITEHYFPQDEDKQTKGYIFITYETGKAASQAVRAMHNTPLDKNHIFQVNLLGDYERLINVSTEWKPPPSQPYVDFGNLKSWLLNEFCRDQFVVVHDNGELGAVYWHSAVEPSLVEERERWTEGWMRWSPRGTYLATMHTQGVIIWGGDEFQRIGRFTHPGVKLIEFSPMEQFMISLSPSASNPVDDMDRPMADVVFWDVLRCVSRREFTIPIESH------PMFKWSYNDAYFACLRDGCVVIYETSTFRILDKKRLG-GNIRDFSWSPAENILAYWVPESDNTPARVVLVAIPSRQELCTKNLFSVAEICLTWHEQGDFLAVQVLRCAKKK-LDNEKQVKYVGTYMNLEIVRMREKLYPVDQLGI--KASVTCFKWEPHGTRFAFVQTVTSGKLSVVIYDVPRGNNIREVVAIEIPSARHNDLRWSPKGDFLVVAGLKSADSYLEFISANEAVSLAKGDHPMVSEIHWDPTGRYLATV-VSSFHQKNDNGIWFWNCVGRCLYKMPLYGLRTFAWRPRPPTLLSVEQLQALKKNMTKYNNHFANEDRMLASKASRELLEKRQRMLSEFNTWKMTIVQQYDGERAERIKLR-GVDADS 647

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Cavefish
Match: eif3ba (eukaryotic translation initiation factor 3 subunit B [Source:NCBI gene;Acc:103023367])

HSP 1 Score: 362.459 bits (929), Expect = 2.573e-115
Identity = 193/582 (33.16%), Postives = 328/582 (56.36%), Query Frame = 3

Query:  219 DANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            +A+ ++KG+IF+ +     A  A K  +G   DK HTFR  + ++F + M+ +DEW+ PE   ++   ++  W+ +  CRDQ  ++  S     IF +  ++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V+ + FSP E++V+T+S      +    + +WDV+TG   R F       + + +WP F+WS D ++FAR  +D +S+Y++ +  ++DKKS++I G+KDF+WS   ++I++WV E +  PAR+ L+ LP++ E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGS+FA L       +   Y +K++G+   I  F    +   + WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGR++++  +S  +   D      +  GRLL         Q++WRPRP  LLS+ +IK IKK++ ++++ F  +D +  ++  + L++ R+ +M+E+   +    +M+  ++P R+ +R   DTD L+
Sbjct:   92 EADGKTKGYIFLEYSVPSHAHEAVKNADGYKLDKQHTFRVNLFTDFDKYMSISDEWEPPEKQPFKDFGNLRHWMEEPDCRDQYSVIYDSGEKTGIFSNDVKEPIEVEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVQLIDFSPCERYVVTFSPLMDTKDDPQAIIIWDVLTGQKKRGFHC-----ESSAHWPIFKWSPDGKFFARMTQDTLSIYETPSMGLLDKKSLKINGIKDFSWSPGDNVIAFWVPEDKDIPARVTLMQLPSRNEIRVRNLFNVVDCKLHWQKNGDYLCVKVDRTPKGTQ--------GIVTNFEIFRMREKQVPVDVVEMKEG--IIAFAWEPNGSRFAVLHGESPRINASFYHVKSNGKIDLIKMFD-KQQANSIFWSPQGQFLVLAGLRSMNGALAFVDTSDCTLMNIAEHYMASDVEWDPTGRFVVT-SVSWWSHKVDNAFWLWTFQGRLLQKNNKDRFCQLLWRPRPPSLLSQEQIKAIKKDLKRYSKIFEQKDRLSQSKASKDLVDKRRGMMDEYRTYREAAMKMYQEQRPLRLELRGGVDTDELD 656

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Sea Lamprey
Match: eif3bb (eukaryotic translation initiation factor 3, subunit Bb [Source:ZFIN;Acc:ZDB-GENE-090312-175])

HSP 1 Score: 358.221 bits (918), Expect = 7.163e-115
Identity = 202/603 (33.50%), Postives = 333/603 (55.22%), Query Frame = 3

Query:   84 KPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVVIP---LDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNE-KFVMTYSLSNLTF----LVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYI-GLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQ--KIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEW 1847
            +P +   I N ++V  +P V   ++++L+  I+        ++     + + ++KG+IF+ +     A  A K  +G   DK HTFR  + ++F + MN  DEW+ PE   ++   +M  WL +  CRDQ  ++  S   + IF +   + +    R+ +TE+IV WSP GTY+AT H +GIALWGGE+F Q+ RF H  V+ + FSP E ++++T+S    T      + VWDV+TG   R F       + + +WP F+W+ D ++FAR  +D +SVY++ +  ++DKKSI+I G++DF+WS    ++++WV E +  PAR+ L+++P+++E+  + LFNV +  L W    DF+ V          VD   R + G     EI+R++EK++PV+ + + E   I A  WE NGSKFA L        +  Y++K +G+    K +D     +   + WSP GQF+  +   S    + F+D  D  V+   E    +D  WDP+GRY+++  +S  +   D      +  GRLL     +   Q++WRPRPA LLS+ +I  +KK   K+++ F  +D MM     R L+E R+KL+E++
Sbjct:   58 RPKEADGIDNVIVVDNVPQVGPERLDKLRNVIKKIFAKFGEIVSDFFPEGDGKTKGYIFLEYSKPSSAQEAVKGADGYKLDKQHTFRVNLFTDFDKYMNICDEWEPPEKQEFKDHGNMRYWLEEPDCRDQFSVIYDSGEKVAIFLNDVTESQIVEERARWTETIVRWSPKGTYLATFHQRGIALWGGERFTQIQRFSHQGVQLIDFSPCEHRYMVTFSPVIDTREDPQAIIVWDVLTGNKRRGFHC-----ESSTHWPIFKWNPDGKFFARMTQDTLSVYETPSMGLLDKKSIKITGIRDFSWSPADDVLAFWVPEDKDIPARVTLMAIPSRQEMRVRNLFNVVDCKLHWQRAGDFMCV---------KVDRTPRGLQGAVTNFEIFRMREKQVPVDVVELKE--VIGAFAWEPNGSKFAVLHGESPRICVSFYNVKNNGKIDLVKTLD---KQQANSIYWSPQGQFVVLAGLRSMNGALAFVDSSDCTVMNVAEHFMASDVEWDPSGRYIIT-SVSWWSHKVDNAYWLWTFQGRLLQKNGLERFCQLLWRPRPATLLSKEQIAEVKKEYKKYHKMFEQKDRMMQYRASRDLIEKRRKLLEDY 640

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Yeast
Match: PRT1 (eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3); subunit of the core complex of eIF3; essential for translation; part of a subcomplex (Prt1p-Rpg1p-Nip1p) that stimulates binding of mRNA and tRNA(i)Met to ribosomes; eIF3 is also involved in programmed stop codon readthrough [Source:SGD;Acc:S000005888])

HSP 1 Score: 250.751 bits (639), Expect = 2.307e-73
Identity = 174/667 (26.09%), Postives = 322/667 (48.28%), Query Frame = 3

Query:   93 KEQNIGNQLLVAGLPIVPESKVEQLKKFIRS----KMRCENVVIPLD-ANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNEN--DEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDITIFEHSSRDLETKW--SRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLS----------------NLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQS-ENCAMVDKKSIEIVGVKDFTWSAKGH-------------LISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQ--------KSTSILIYDLKTSGQTQKIMDFGF-----STRMTMLKWSPTGQFIACSM-----TNSSFIEFIDGHDGVVLKRVETNN----------------LTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQ 1874
            +E N    ++V G P++P +KV  LKK + S      +  N+  P+D A  ++KGF+FV   +   A    K F+G   D  H      + + ++  +++   E++EP+   +   + + SWL+  + RDQ ++      ++F +S  + E     SR +++ + V +SP GTY+ + H +G+  WGG  F ++ RF H  VR+   SPNEK+++T+S                  N    + +WD+ +G L+  F + K+   +   WP  RWS++D+Y AR   D + V+ + +N   ++ K+++  G++DF+++ +G              L++YW  E  ++     +  +P  + +    L  V+ ++L W +Q +FL    ER+ K      + ++  L  C    R+ E++IPVEK+ +  K  +    WE +G++F  ++ ++         + +I  Y  +T  +T  I  +        T    + WSP G+F+            S ++F D  D    K +  NN                 T+  WDP+GRY+ ++  SL     + G    +I G L+ +    G K   WRPRPA +LS  E K ++KN+ +++ QF  QD M ++   R L+ ++++L+++W + + +I Q
Sbjct:   71 EEFNFDQYIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIKSFHGKRLDLKHRLFLYTMKDVERYNSDDFDTEFREPDMPTFVPSSSLKSWLMDDKVRDQFVLQDDVKTSVFWNSMFNEEDSLVESRENWSTNYVRFSPKGTYLFSYHQQGVTAWGGPNFDRLRRFYHPDVRNSSVSPNEKYLVTFSTEPIIVEEDNEFSPFTKKNEGHQLCIWDIASGLLMATFPVIKSPYLK---WPLVRWSYNDKYCARMVGDSLIVHDATKNFMPLEAKALKPSGIRDFSFAPEGVKLQPFRNGDEPSVLLAYWTPETNNSACTATIAEVPRGRVLKTVNLVQVSNVTLHWQNQAEFLCFNVERHTKS----GKTQFSNLQIC----RLTERDIPVEKVEL--KDSVFEFGWEPHGNRFVTISVHEVADMNYAIPANTIRFYAPETKEKTDVIKRWSLVKEIPKTFANTVSWSPAGRFVVVGALVGPNMRRSDLQFYD-MDYPGEKNINDNNDVSASLKDVAHPTYSAATNITWDPSGRYVTAWSSSL-KHKVEHGYKIFNIAGNLVKEDIIAGFKNFAWRPRPASILSNAERKKVRKNLREWSAQFEEQDAMEADTAMRDLILHQRELLKQWTEYREKIGQ 722

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Nematostella
Match: EDO38554 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCN6])

HSP 1 Score: 361.303 bits (926), Expect = 1.048e-115
Identity = 221/643 (34.37%), Postives = 348/643 (54.12%), Query Frame = 3

Query:   75 LLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVVI----PLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQL-LIHSKSD-ITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS-----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQT--QKIMDFGFSTRMTMLKWSPTGQF--IACSMTNSSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKE 1958
            L  KP + +     ++V  +P V   +VE+LK  IR        ++    P++  + ++G+IF+ F     A+ A K  NG   DK H F      +F +L++  +EW+EP    +  Q ++ SWLL   C DQ  +IHS  D ++IF ++ ++      R ++TE    WSP GTY+AT H +GIALWGGE F ++ RF H  V+ + FSP E++++++S       + T +V +W++ TG   R F+   T +     WP F+WS D +YFAR   D ISVY++ +  ++DKKS++I GVKDF WS   ++I++WV E + TPAR+ L+ +P + EV  K LFNV++  + W ++ DF  V  +RY K K          L    E++RV+E++IPV+ + + E   I++  WE  GSKF  L  +    S   Y+++  G    QK  +     +   + WSP GQF  +A   + S  +EF D  D V + + E    TD  WDPTGRY+ +  +S      D G    S  G+LL         Q +WRPRPA LL E+ IK +KK++ K+ + F  +D M  +   ++L+E R++ M+E+   + + S  F  +K  R+ +R   DTD+ E    +E
Sbjct:    7 LRQKPSETEGTDCIIVVDNVPKVGPERVEKLKNVIRKVFSKFGQIVTEHYPME-KDLTRGYIFLEFSNASDAVRAVKTANGYKLDKHHIFAVNHFEDFNKLLSLKEEWQEPTKQPYEQQENLRSWLLDPDCNDQYSVIHSAGDKLSIFSNTPQEPILVRERDNWTEMYAQWSPKGTYLATFHKQGIALWGGEDFKRIMRFNHPGVQLIDFSPCERYLVSFSPIVTNTEDPTGIV-IWEIRTGLKKRGFLAGDTSQ-----WPAFKWSNDGKYFARMAPDSISVYETPSFGLLDKKSLKIQGVKDFQWSPVDNIIAFWVPEVKDTPARVTLMQIPERHEVRVKNLFNVSDCKMYWQNKGDFFCVKVDRYTKSKK--------ALYYNFELFRVRERQIPVDSLEMKEP--IISFAWEPGGSKFCVLHGDSSRISASFYNMEKQGSVDLQKTYE---KRQANTISWSPNGQFCVLAGLRSMSGVLEFHDTGDWVCMNQAEHFMATDVEWDPTGRYVAT-SVSWWAHKVDNGYFIWSFQGKLLQRHALDQFCQFLWRPRPATLLDEDAIKKLKKDIKKYQRTFEIKDRMSQSRASKELIERRRRKMKEFEGYRQKKSNEFIQQKKQRLELRNGLDTDDFESETAQE 628

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BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Nematostella
Match: EDO39938 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8G4])

HSP 1 Score: 55.0694 bits (131), Expect = 7.442e-8
Identity = 71/377 (18.83%), Postives = 143/377 (37.93%), Query Frame = 3

Query:  639 IQVNRFLHTKVRHVLFSPN-------EKFVMTYSLSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKK-SIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLP---TKKEVFA-KTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEI 1727
            + V++   TK   + FSP        E F  +    N +  + +WD+ +G  I  F   K D      W + RW+ D+   AR   +++  +   + + +  K  ++ VG  + +     + I+ +V   +  P+ + L   P       V A K+ F   ++ +KWN +     V+    V          Y G      +    E  +    + + +K  I    W     +F  + +        +Y+ +       + DFG   R   + ++P G  +  +   +   ++EF    D  ++ + + ++ T F W P G ++++   +      + G      TG L      + L Q  W+P P  +  E  +
Sbjct:   68 VLVHQLPKTKTACLSFSPRGNYLSTWEPFTTSKDNPNGSKNLEIWDIKSGQAIVAFYQKKRDT-----W-QPRWTDDEEVCARSVSNEVHCFHGGDFSNIASKLRLQGVGSFEISHGKAPYTIAAYVPGTKGAPSAVRLFQHPDFDNPGSVLANKSFFKADKVDIKWNKKGTSALVLTSVEVDASGAS----YYGEQTLHCVNTSGESSM----VQLGKKGPIYDVAWSPTLQEFCVV-YGYMPAKATLYNHRCDA----VFDFGTGPR-NEIHYNPHGNILCLTGFGNLRGWMEFWSRKDLKMISKPQASDTTYFEWSPDGEHILTATTAPRLREGN-GFKIWHYTGALKYQTDVKELWQATWQPCPEGVFKEKPV 423

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Medaka
Match: EIF3B (eukaryotic translation initiation factor 3 subunit B [Source:NCBI gene;Acc:101166446])

HSP 1 Score: 361.303 bits (926), Expect = 5.381e-115
Identity = 192/582 (32.99%), Postives = 326/582 (56.01%), Query Frame = 3

Query:  219 DANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQ--LLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYS----LSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNS--SFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLE 1940
            +A+  +KG+IF+ + +   A+ A K  +G   DK HTFR  + ++F + MN +DEW  P    ++   +M  W+    CRDQ  ++  +     IF + +++      R+ +TE+ V WSP GTY+AT H +GIALWGGEKF Q+ RF H  V  + FSP E++V+T+S           + +WD++TG   R F       + + +WP F+WS D ++FAR  +D +S+Y++ +  ++DKKS++I G+KDF+WS   ++I++WV E +  PAR+ L+ +P+++E+  + LFNV +  L W    D+L V  +R  K           G+    EI+R++EK++PV+ + + E   I+A  WE NGSKFA L       +   Y +K +G+ + I  F    +   + WSP GQF+  +   S    + F+D  D  ++   E    +D  WDPTGRY+++  +S  +   D      +  GRLL         Q++WRPRP  LLS ++IK IKK++ K+++ F  +D +  ++  ++L++ R+ ++E++ + +    + +  +K  R+ +R   DTD L+
Sbjct:   92 EADGTTKGYIFLEYSSPNQALEAVKNADGYKLDKQHTFRVNLFTDFDKYMNISDEWDPPAKQPFKDFGNMRHWIEDPDCRDQYSVIYEAGERTAIFANDAKEPILAEERARWTETYVRWSPKGTYLATFHQRGIALWGGEKFKQIQRFSHQGVSLIDFSPCERYVVTFSPLMDTKEDPQAIIIWDILTGQKKRGFHC-----ESSAHWPIFKWSHDGKFFARMTQDTLSIYETPSMGLLDKKSLKINGIKDFSWSPGDNIIAFWVPEDKDIPARVTLMQMPSRQEIRVRNLFNVVDCKLHWQRNGDYLCVKVDRTPKGTQ--------GVVTNFEIFRMREKQVPVDVVEMKE--SIIAFAWEPNGSKFAVLHGESPRINASFYHVKNNGKIELIKMFD-KQQANSIFWSPQGQFMVLAGLRSMNGALAFVDTSDCTMMNIAEHYMASDVEWDPTGRYVVT-SVSWWSHKVDNAYWVWTFQGRLLQKNNKDRFCQLLWRPRPPTLLSADQIKMIKKDLKKYSKTFEQKDRLSQSKASKELVDKRRTMLEDYRRYREEALKNYQEQKSMRLELRGGVDTDELD 656

[Close]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Planmine SMEST
Match: SMESG000069603.1 (SMESG000069603.1)

HSP 1 Score: 1330.08 bits (3441), Expect = 0.000e+0
Identity = 652/653 (99.85%), Postives = 653/653 (100.00%), Query Frame = 3

Query:   12 MTKLSEMTXXXXXXXXXXXLPLLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNSSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKEQTYV 1970
            MTKLSEMTIEQIINQEINELPLLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNSSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLME+RQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKEQTYV
Sbjct:    1 MTKLSEMTIEQIINQEINELPLLPKPFKEQNIGNQLLVAGLPIVPESKVEQLKKFIRSKMRCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVAFDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRDQLLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKGIALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVWDVVTGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCAMVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVFAKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIYRVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLKTSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNSSFIEFIDGHDGVVLKRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKPFQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRKLMEHRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKEQTYV 653

The following BLAST results are available for this feature:

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Human
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Celegans
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Fly
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Zebrafish
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Xenopus
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Mouse
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Cavefish
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Sea Lamprey
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Yeast
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Nematostella
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Medaka
BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Planmine SMEST

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 4


Match Name	E-value	Identity	Description
EIF3B	3.300e-121	33.91	eukaryotic translation initiation factor 3 subunit...	[more]
EIF3B	3.300e-121	33.91	eukaryotic translation initiation factor 3 subunit...	[more]
EIF3B	1.342e-25	38.36	eukaryotic translation initiation factor 3 subunit...	[more]
EIF3B	5.726e-12	28.99	eukaryotic translation initiation factor 3 subunit...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
eif-3.B	3.300e-86	28.10	Eukaryotic translation initiation factor 3 subunit...	[more]
eif-3.B	3.300e-86	28.10	Eukaryotic translation initiation factor 3 subunit...	[more]
eif-3.B	3.300e-86	28.10	Eukaryotic translation initiation factor 3 subunit...	[more]
eif-2A	9.935e-10	24.86	Eukaryotic translation initiation factor 2A [Sour...	[more]
eif-2A	9.935e-10	24.86	Eukaryotic translation initiation factor 2A [Sour...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2


Match Name	E-value	Identity	Description
eIF3b	1.020e-106	31.06	gene:FBgn0034237 transcript:FBtr0086942	[more]
eIF3b	1.020e-106	31.06	gene:FBgn0034237 transcript:FBtr0086941	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
eif3ba	7.281e-114	33.28	eukaryotic translation initiation factor 3, subuni...	[more]
eif3bb	2.922e-113	33.39	eukaryotic translation initiation factor 3, subuni...	[more]
eif3bb	1.073e-106	31.70	eukaryotic translation initiation factor 3, subuni...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4


Match Name	E-value	Identity	Description
rsph3	9.648e-117	34.19	radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-98...	[more]
rsph3	1.101e-116	34.19	radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-98...	[more]
rsph3	1.831e-116	34.19	radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-98...	[more]
rsph3	1.361e-113	33.85	radial spoke head 3 [Source:Xenbase;Acc:XB-GENE-98...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 2


Match Name	E-value	Identity	Description
Eif3b	1.090e-120	33.60	eukaryotic translation initiation factor 3, subuni...	[more]
Eif3b	5.305e-21	31.08	eukaryotic translation initiation factor 3, subuni...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|A7MB16\|EIF3B_BOVIN	4.620e-122	33.91	Eukaryotic translation initiation factor 3 subunit...	[more]
sp\|P55884\|EIF3B_HUMAN	1.585e-120	33.91	Eukaryotic translation initiation factor 3 subunit...	[more]
sp\|Q1HDZ5\|EIF3B_BOMMO	2.623e-120	34.39	Eukaryotic translation initiation factor 3 subunit...	[more]
sp\|Q4G061\|EIF3B_RAT	4.297e-120	33.60	Eukaryotic translation initiation factor 3 subunit...	[more]
sp\|Q8JZQ9\|EIF3B_MOUSE	7.626e-120	33.60	Eukaryotic translation initiation factor 3 subunit...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A4E0RFT7	2.284e-136	36.60	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A504Z2A0	4.286e-134	36.36	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A1S3JF76	1.401e-130	35.74	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A4Y7LQQ4	8.463e-130	35.40	Eukaryotic translation initiation factor 3 subunit...	[more]
A0A5J4P113	1.594e-129	35.10	Eukaryotic translation initiation factor 3 subunit...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1


Match Name	E-value	Identity	Description
eif3ba	2.573e-115	33.16	eukaryotic translation initiation factor 3 subunit...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1


Match Name	E-value	Identity	Description
eif3bb	7.163e-115	33.50	eukaryotic translation initiation factor 3, subuni...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
PRT1	2.307e-73	26.09	eIF3b subunit of the eukaryotic translation initia...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2


Match Name	E-value	Identity	Description
EDO38554	1.048e-115	34.37	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO39938	7.442e-8	18.83	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1


Match Name	E-value	Identity	Description
EIF3B	5.381e-115	32.99	eukaryotic translation initiation factor 3 subunit...	[more]

BLAST of Eukaryotic translation initiation factor 3 subunit B vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1


Match Name	E-value	Identity	Description
SMESG000069603.1	0.000e+0	99.85	SMESG000069603.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30025010 ID=SMED30025010|Name=Eukaryotic translation initiation factor 3 subunit B|organism=Schmidtea mediterranea sexual|type=transcript|length=2075bp
TTTAAACATCAATGACGAAGTTAAGTGAAATGACTATTGAACAAATAATT
AACCAAGAAATAAATGAACTACCGCTTCTTCCTAAACCATTCAAAGAACA
GAACATAGGAAATCAACTATTAGTTGCTGGACTTCCTATTGTTCCTGAAA
GTAAAGTTGAACAATTAAAAAAATTTATTAGAAGTAAAATGAGATGTGAA
AATGTTGTAATTCCTTTGGATGCTAATAATCAAAGCAAAGGGTTTATTTT
TGTAACTTTCCCAACTGATGAAATCGCTATGATGGCCCATAAGCAATTTA
ACGGAGTAGCTTTTGACAAAAGCCACACATTCCGAACAATTATATTATCC
GAATTCCAGCAACTAATGAATGAAAATGATGAATGGAAAGAACCAGAACC
TTTAGTTTGGAGATATCAAAACGATATGCTTTCTTGGCTTTTACAACGTC
AGTGTAGAGATCAATTACTAATCCACAGTAAAAGTGATATAACAATTTTT
GAGCATTCATCACGAGATCTCGAAACAAAATGGAGTCGAAGTGATTTCAC
CGAATCCATTGTATTATGGTCACCGCTCGGTACATACATGGCAACAATCC
ATGACAAAGGTATTGCACTATGGGGCGGCGAGAAATTCATCCAAGTCAAT
CGATTTCTTCACACCAAAGTCCGACACGTTCTATTTTCACCGAATGAAAA
ATTTGTCATGACTTACAGCTTGAGCAATCTAACATTTCTCGTCAACGTCT
GGGATGTCGTCACTGGAACTCTGATCCGAGAGTTTATCATCCCGAAAACC
GACGAGGATGAAAATCAATACTGGCCGGAATTTCGCTGGAGTTTCGATGA
TAGATATTTCGCCCGCAAGCAAAAGGACAAAATCTCGGTCTACCAATCGG
AAAACTGTGCGATGGTCGATAAGAAGAGCATCGAGATTGTCGGGGTGAAG
GATTTCACGTGGTCGGCCAAGGGCCATCTCATCTCGTATTGGGTGGGCGA
GCAAGAGAGCACTCCAGCTAGAATCGTTCTCATTAGCTTGCCGACTAAGA
AGGAAGTTTTTGCAAAGACTCTTTTCAATGTTGCGGAAATCTCGTTGAAA
TGGAACTCGCAGGACGACTTTTTGGCAGTTATCGGAGAGCGATATGTGAA
GAAGAAAACCGTCGACAATCAATTGAGATATATTGGATTAAGTGCATGTT
TGGAAATTTACCGAGTAAAAGAAAAAGAAATTCCCGTGGAAAAGATTCCA
ATTAGTGAAAAAACACAAATTGTTGCCAACGATTGGGAAGCTAACGGATC
GAAATTTGCTTTCCTTACTTTTAATCAAAAGTCGACTAGTATTCTGATTT
ACGATTTGAAAACAAGTGGACAAACCCAGAAAATAATGGATTTTGGATTC
TCGACTCGAATGACAATGCTAAAATGGTCACCGACTGGCCAGTTTATTGC
TTGCTCAATGACAAACAGTAGTTTTATCGAATTTATTGATGGGCATGATG
GAGTAGTGTTGAAGCGAGTCGAAACGAACAATTTGACCGATTTCGTTTGG
GATCCTACTGGCCGATATTTAATGTCCTATCGACTGAGTTTGATTAATGA
AAGCAGCGACTGTGGAGTCACTTTCCACAGTATTACCGGTCGACTGTTGA
TGGATAAACCATTTCAGGGGTTAAAGCAGATCATTTGGCGACCAAGACCG
GCTTGTTTGTTGTCTGAAAATGAAATCAAAAACATTAAGAAGAACATGGC
TAAATTCAATCAACAATTCGCTCATCAAGATGAGATGATGTCTAATGAAA
CCAAGCGCAAATTGATGGAGAATCGCCAGAAATTGATGGAAGAATGGGCA
AAGGTAAAATCTCGCATCAGCCAAATGTTTAGCAACGAGAAGCCCACTAG
AATCGGAATGAGAAAAAATACTGACACAGACAATCTCGAACATGGCAAAT
GCAAGGAGCAAACGTACGTTTTGGTTTCCTCTTCTATCCAATTATTGTCC
CATTAATTAATTAATATTATCAATAGAGTTCTTGTGGTTCTTCCTGTCTT
ATTTCATTGTTTTTGTTTGATTTTC

protein sequence of SMED30025010-orf-1

>SMED30025010-orf-1 ID=SMED30025010-orf-1|Name=SMED30025010-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=665bp
MTKLSEMTIEQIINQEINELPLLPKPFKEQNIGNQLLVAGLPIVPESKVE
QLKKFIRSKMRCENVVIPLDANNQSKGFIFVTFPTDEIAMMAHKQFNGVA
FDKSHTFRTIILSEFQQLMNENDEWKEPEPLVWRYQNDMLSWLLQRQCRD
QLLIHSKSDITIFEHSSRDLETKWSRSDFTESIVLWSPLGTYMATIHDKG
IALWGGEKFIQVNRFLHTKVRHVLFSPNEKFVMTYSLSNLTFLVNVWDVV
TGTLIREFIIPKTDEDENQYWPEFRWSFDDRYFARKQKDKISVYQSENCA
MVDKKSIEIVGVKDFTWSAKGHLISYWVGEQESTPARIVLISLPTKKEVF
AKTLFNVAEISLKWNSQDDFLAVIGERYVKKKTVDNQLRYIGLSACLEIY
RVKEKEIPVEKIPISEKTQIVANDWEANGSKFAFLTFNQKSTSILIYDLK
TSGQTQKIMDFGFSTRMTMLKWSPTGQFIACSMTNSSFIEFIDGHDGVVL
KRVETNNLTDFVWDPTGRYLMSYRLSLINESSDCGVTFHSITGRLLMDKP
FQGLKQIIWRPRPACLLSENEIKNIKKNMAKFNQQFAHQDEMMSNETKRK
LMENRQKLMEEWAKVKSRISQMFSNEKPTRIGMRKNTDTDNLEHGKCKEQ
TYVLVSSSIQLLSH*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **biological process**
Term	Definition
GO:0001732	formation of cytoplasmic translation initiation complex
GO:0002183	cytoplasmic translational initiation
GO:0006413	translational initiation
GO:0001731	formation of translation preinitiation complex
GO:0006412	translation
GO:0006446	regulation of translational initiation

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0002032	epidermal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR034363	eIF3B_RRM
IPR035979	RBD_domain_sf
IPR011042	6-blade_b-propeller_TolB-like
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR011400	EIF3B
IPR013979	TIF_beta_prop-like
IPR000504	RRM_dom

Vocabulary: **molecular function**
Term	Definition
GO:0005515	protein binding
GO:0000166	nucleotide binding
GO:0003743	translation initiation factor activity
GO:0003723	RNA binding
GO:0031369	translation initiation factor binding
GO:0003676	nucleic acid binding

Vocabulary: **cellular component**
Term	Definition
GO:0005852	eukaryotic translation initiation factor 3 complex
GO:0005737	cytoplasm
GO:0016282	eukaryotic 43S preinitiation complex
GO:0033290	eukaryotic 48S preinitiation complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 565..585
None	No IPR available	PANTHER	PTHR14068:SF0	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT B	coord: 28..648
None	No IPR available	SUPERFAMILY	SSF82171	DPP6 N-terminal domain-like	coord: 184..521
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 50..102 e-value: 8.0E-5 score: 22.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 34..117 score: 10.428
IPR013979	Translation initiation factor, beta propellor-like domain	PFAM	PF08662	eIF2A	coord: 352..556 e-value: 1.7E-19 score: 70.4
IPR011400	Eukaryotic translation initiation factor 3 subunit B	PIRSF	PIRSF036424	Transl_init_eIF3b	coord: 2..662 e-value: 1.1E-168 score: 560.0
IPR011400	Eukaryotic translation initiation factor 3 subunit B	PANTHER	PTHR14068	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED	coord: 28..648
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	G3DSA:3.30.70.330		coord: 34..109 e-value: 9.4E-11 score: 43.6
IPR011042	Six-bladed beta-propeller, TolB-like	GENE3D	G3DSA:2.120.10.30		coord: 408..526 e-value: 1.2E-6 score: 30.0
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	G3DSA:2.130.10.10		coord: 139..324 e-value: 5.0E-9 score: 37.2
IPR034363	eIF3B, RNA recognition motif	CDD	cd12278	RRM_eIF3B	coord: 33..110 e-value: 3.43124E-22 score: 88.7864
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	SSF54928	RNA-binding domain, RBD	coord: 29..103