G_PROTEIN_RECEP_F1_2 domain-containing protein

Overview
NameG_PROTEIN_RECEP_F1_2 domain-containing protein
Smed IDSMED30025000
Length (bp)1483
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of G_PROTEIN_RECEP_F1_2 domain-containing protein (SMED30025000) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for G_PROTEIN_RECEP_F1_2 domain-containing protein (SMED30025000) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30025000

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30025000SMESG000078297.1 dd_Smed_v6_13282_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017
whole organism asexual adult RNA-sequencing evidence
enteric muscle cellSMED30025000SMESG000078297.1 dd_Smed_v4_13282_0_1dd_Smed_v4PMID:30471994
Scimone et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A210Q8Y1 (Cysteinyl leukotriene receptor 2 OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT23614 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 8.396e-44
Identity = 102/310 (32.90%), Postives = 173/310 (55.81%), Query Frame = 1
Query:  418 NCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERG-VYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDSC--LSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRA 1338
            NC+ L+V +++ +   ++S Y    S  D+L L+FYV  EWL RG VY    +++L L+   G+CQ  L++SY  RFLS W++V +++ERYI + +P  R+ +C   S  ++I     V++L+ ++K + S V    +GG   C  +   +  +F+ D I+A  I ++P  +I + N LI R LFI  K+   C  ++ + +I  +F  +L+ ISFCF++   PY+  W  ++ +H + + K           +S+ ++ W+    I  ITR IFY ++  NFFLY+ T  +FR E++ LF  R    R 
Sbjct:   86 NCLSLNVFLSKNMRGLSASTYLAAISSSDLLTLIFYVNVEWLRRGLVYLNPDVQVLFLDT-TGVCQFQLYMSYVSRFLSAWLVVAFTVERYIGVCHPLRRRDICTPSSTRRIIITTSCVAVLLVIYKPVLSGVHKGSSGGHPYCTSDPDHDFLSFVLDSIFAVLITLVPFLIITVLNVLIIRKLFIRNKRQKECKIVTEESVIKLEFTVILLAISFCFVVFNVPYFAVWCRNF-LHSKYVYK------SVEQDMSDDIEYWQ---GILYITRTIFYMNYCINFFLYSITGAYFRREVRMLFVYRPTELRG 384          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: K1QUW0 (C-C chemokine receptor type 1 OS=Crassostrea gigas OX=29159 GN=CGI_10013746 PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 4.021e-38
Identity = 93/304 (30.59%), Postives = 158/304 (51.97%), Query Frame = 1
Query:  418 NCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDSC--LSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRS 1323
            N + L V +T+ + + ++S Y    S  D+L L+FYVL EW++R +     +         GICQI +++ Y  RFLS WI+V ++ ERYI + +   RK  C   S  K++  +  +++++ ++K   +     G   I +C+ +   +  +FI DCI+   II +P  +I + N++I R L+I  K +  C  ++ + +I  +F  +L+ ISFCF+ L  PY        W    +L +F          ++N   E   +  +  ITR IFY ++  NFFLY  T  +FR E++ LF  +S
Sbjct:   29 NILSLRVFVTKNMRKLSASLYLAALSTADLLSLIFYVLIEWIKRSISPDPSVPAAPFFEQNGICQILIYMQYISRFLSSWIIVCFTFERYIGVCHTLKRKTFCDMHSTRKIVTSVVCLAVVLCIYKPCMTASVEVGPYKIKVCSTDPNHQDMSFILDCIFVFCIIFLPFVIITVLNSMIIRTLYIRNKHHRQCKVITEESIIRLEFTVILIAISFCFIALNTPY-----TAIWCKQHLLTRFVKQMDGDQLLVANTGSEMTWNINVMFITRTIFYMNYCVNFFLYCLTGAYFRKELRMLFMYKS 327          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: V3Z3R3 (G_PROTEIN_RECEP_F1_2 domain-containing protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_130696 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 6.818e-36
Identity = 96/304 (31.58%), Postives = 159/304 (52.30%), Query Frame = 1
Query:  418 NCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDS--CLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRS 1323
            N + L V +++ + + ++S Y    S  D+L L+FYVL +WL+RG+  L+    +        CQ FL+LSY  RFLS W +V ++ ERYI +  P  RK +C K  + K+I  L   S  I ++K   S V    +  + +C  + +     FI D IYA  I  IP  +I + N LI R LF+  KK+ S   ++ + +I  +F  +L++ISF F+ L  P++  W   + +                 +++   +++   + +  ITR+IFY ++  NFFLY+ T  +FR E++ LF  +S
Sbjct:   60 NLLSLRVFLSKNMRKLSASTYLAALSTSDILALIFYVLVDWLKRGLPALNPDLQVTFLETNVTCQAFLYLSYLSRFLSAWFIVSFTAERYIGVCLPLQRKNICGKRFSQKIICTLVVCSACIMMYKPFLSGVYQINHTKVKMCTRDPELSFPVFILDSIYAVLITFIPFIIITVLNTLIMRKLFLRNKKHRSIKIITEESIIKLEFTIILLVISFVFIALNLPFFCVWCRQFLLSVS-------------ATMNEHARDFDNMHGLLLITRVIFYLNYCVNFFLYSVTGAYFRKELRILFFYKS 350          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A1S3K8A8 (probable G-protein coupled receptor 139 OS=Lingula unguis OX=7574 GN=LOC106179688 PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.933e-36
Identity = 98/311 (31.51%), Postives = 164/311 (52.73%), Query Frame = 1
Query:  418 NCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDS-----CLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKR 1335
            N +  +V ++R +   ++SQY    S+ D+LVLV YV  +W  RG+  L     L + A+ G+C +FL+ SY LRF+SVW++V ++IERYI +  P  + ++C +    + I    +V ++I+L+K + S V A    G+ +C    + E  + + D ++   I ++P  +I + N ++   L +  K+N +     C+  +  +  +   +L+ +S CF+ L  PY+  W    +  YQ LN          GS SN L +   +  +  ITR IFY ++ SNFFLY+ T   FR E+  LF    L KR
Sbjct:   69 NSLSFNVFISRSMRGLSASQYLAALSISDILVLVVYVFLDWTTRGLPFLPRNIKLDILAMNGVCHMFLYFSYSLRFISVWLIVAFTIERYIGVCLPLKKIKICSRAYARRTILTYTAVGMVISLYKPILSGVYAKEEVGVKVCTFNPEYEFVSNVLDAVFGLAITLVPFLIIAVLNVIMVHKLRMRSKRNKNGMRVHCVVKENKLRLEMTLILIGLSTCFIALNLPYFAVWC---FSRYQTLN----------GS-SNSLADLVTTRGVLYITRTIFYINYCSNFFLYSITGACFRKELLDLFRYHRLLKR 365          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Match: A0A210QVR9 (Thyrotropin-releasing hormone receptor OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT23382 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.314e-35
Identity = 94/304 (30.92%), Postives = 150/304 (49.34%), Query Frame = 1
Query:  418 NCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDSC--LSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRS 1323
            N + L V +T+ + + ++S Y    S+ D++ L FYVL EW+ RG+   S           G+CQI ++L Y  RFL  W++  +++ERYI + +P  RK +C   S+ K++  L   + ++  +K   S     GN     C         +F++DC++   I  +P  +I + NA I R L I  K++  C  ++ + +I  +F  +L+ ISFCF+    PY   W   + +      KF            N L    L N     TR IFY ++  NFFLY+ T  +FR E+K LFT +S
Sbjct:   97 NILSLRVFLTKNMRKLSASVYLAALSVADLMALCFYVLTEWIRRGIPVESGQVTAPFLEQNGVCQILVYLQYISRFLCAWLVACFTLERYIGVCHPLKRKDICDVRSSRKIVFTLIITAFIVCSFKPFLSESVVAGNYNAPTCTRSQAHADLSFVFDCVFGVSITFLPFVIITVLNAFIIRKLLIRNKRHRECKVITEESIIRLEFTFILIAISFCFIAFNVPYSVVWYKLFVLSRDRFEKF------------NFLDTQDLLN----FTRTIFYINYCINFFLYSITGAYFRKELKMLFTYKS 384          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000078297.1 (SMESG000078297.1)

HSP 1 Score: 743.806 bits (1919), Expect = 0.000e+0
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 1
Query:  214 MKFKDPCVMRRLFQQINRXXXXXXXXXXXXXXXKILNITGIPDLDIHSXXXXXXXXXXXXXXXXXXXXNCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINFLKDHLSLNTI 1461
            MKFKDPCVMRRLFQQINRPSNDSNNSINCSDPIKILNITGIPDLDIHSVYLYVYVIVTGLLLTLGLTGNCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAFIIIIPSFLILIFNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINFLKDHLSLNTI
Sbjct:  141 MKFKDPCVMRRLFQQINRPSNDSNNSINCSDPIKILNITGIPDLDIHSVYLYVYVIVTGLLLTLGLTGNCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAFIIIIPSFLILIFNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINFLKDHLSLNTI 556          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000078297.1 (SMESG000078297.1)

HSP 1 Score: 743.421 bits (1918), Expect = 0.000e+0
Identity = 416/416 (100.00%), Postives = 416/416 (100.00%), Query Frame = 1
Query:  214 MKFKDPCVMRRLFQQINRXXXXXXXXXXXXXXXKILNITGIPDLDIHSXXXXXXXXXXXXXXXXXXXXNCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINFLKDHLSLNTI 1461
            MKFKDPCVMRRLFQQINRPSNDSNNSINCSDPIKILNITGIPDLDIHSVYLYVYVIVTGLLLTLGLTGNCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAFIIIIPSFLILIFNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINFLKDHLSLNTI
Sbjct:  150 MKFKDPCVMRRLFQQINRPSNDSNNSINCSDPIKILNITGIPDLDIHSVYLYVYVIVTGLLLTLGLTGNCICLHVAMTRKLIRQASSQYFFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAFIIIIPSFLILIFNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINFLKDHLSLNTI 565          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000002195.1 (SMESG000002195.1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.075e-21
Identity = 86/298 (28.86%), Postives = 142/298 (47.65%), Query Frame = 1
Query:  433 HVAMTRKLIRQASSQYFFVFSLC--DVLVLVFYVLPEWLERGVYQLSHIEMLRLNAI---QGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMH---NFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRK----KNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFR 1290
            H    ++  RQ S+ +  + SLC  D +V++F+V  EW ++G+ +L  +   R N+I   +GIC I+L +SY  R  +VW+LV+++IERYI +  P  +++ C K    K I  +   S+ ++L+K     +        + C     +  H   +F+ D +YA     IP  ++L+ N LI + L I+R     K    ++ Q     Q+   L+ IS C++IL  PY   W+                    L S     K      E+  +T+ IFY ++ +NFFLY  T   FR
Sbjct:   77 HKMSRQRFNRQGSTCFCCLKSLCLIDNVVIIFHVFFEWEQKGLSKL--VISKRFNSILETKGICYIYLIMSYTSRLAAVWMLVLFNIERYIGICMPLQKQKFCTKKKITKWILIVIFASVFVSLYKPFLHFMDP------ITCLSTGSRASHRTVSFVLDSMYAVCTTFIPCLIVLLLNILIGKAL-ILRSVTFAKFRITMTQQTSFNHQYGAFLITISICYIILNLPYAINWV-------------------LLASSDECSKNLHFLREMLYVTKTIFYLNYCANFFLYNLTLASFR 346          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000046589.1 (SMESG000046589.1)

HSP 1 Score: 94.3597 bits (233), Expect = 9.298e-21
Identity = 89/339 (26.25%), Postives = 153/339 (45.13%), Query Frame = 1
Query:  418 NCICLHVAMTRKLIRQASSQYFFVFSLCDVL-------VLVFYVLPEWLERGVYQLSHI--EMLRLNAIQGICQIFLFLSYWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIAR------HLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVN 1389
            N   L V  T+KL   +SS      S+C          V++F+V+ EW  RG+    ++  +  +     GIC+++L+++Y LR  SV +++++++ERYI + +P  R  +C K      I  +  +S++++ +K   S   A  N       G + +  H FI D  Y   +  +P   I+  NA I R      H F I+         +  I  QF   ++ +S CF++L  PY+  W        ++L   PS    AL                  ITR IF+ ++  NFFLY+ T  +FRAE++R+   +        + +   +I+ Q+  N
Sbjct:   69 NSFSLAVFCTKKLRNTSSSSC----SMCLAALSLSDLLVIIFHVIIEWSIRGLPDFINVSFDQWKWANTDGICKVYLYVAYTLRMNSVGLIILFTLERYIVVCHPLQRNIICTKRRIRNCIICVFFISLILSSFK--PSISDAKNN------CGSSLRSKHAFILDTCYGMLLTAVPFVSIVTMNAFILRQLTSRSHKFAIKSPRG-----RNTISKQFGITMLALSSCFVLLNLPYFVIWC------MRLLYTEPSKRLSAL----------------LQITRGIFHFNYCINFFLYSLTGAYFRAELERIIYCKKSTSLVTGYISRHSVINNQIREN 368          
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Match: SMESG000073832.1 (SMESG000073832.1)

HSP 1 Score: 88.9669 bits (219), Expect = 6.786e-20
Identity = 74/219 (33.79%), Postives = 114/219 (52.05%), Query Frame = 1
Query:  775 ILITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAXXXXXXXXXXXXXNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWPYYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRIIFYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQLLVNQNGVDQETQNNINF 1431
            ++I L++   S V    N     C        H+ I D +YA  + ++PS +ILI + LIAR L I R   +  LSH+E++G QFA  LVLIS   L+ TWPYY CWI   W + +I                 + ++++  N I  IT+ IFY ++S NFFLY+  + +FR+EMKR+F+  S ++ A +   D      +L +N      ++Q+   F
Sbjct:    1 MVICLYRPFLSTVSELKNKQKH-CTSTAATFFHSNILDTLYAGMLCVVPSIIILIVSILIARRLLIFRHLVNR-LSHKEMMGVQFASFLVLISSGLLLFTWPYYVCWI-IRWYYVRI-----------------KSEKFETLNSIFDITKSIFYCNYSMNFFLYSLATFYFRSEMKRVFSNSSSQRNASKSIVD----INELQINYKTHKAQSQDQPPF 195          
The following BLAST results are available for this feature:
BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A210Q8Y18.396e-4432.90Cysteinyl leukotriene receptor 2 OS=Mizuhopecten y... [more]
K1QUW04.021e-3830.59C-C chemokine receptor type 1 OS=Crassostrea gigas... [more]
V3Z3R36.818e-3631.58G_PROTEIN_RECEP_F1_2 domain-containing protein OS=... [more]
A0A1S3K8A89.933e-3631.51probable G-protein coupled receptor 139 OS=Lingula... [more]
A0A210QVR93.314e-3530.92Thyrotropin-releasing hormone receptor OS=Mizuhope... [more]
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of G_PROTEIN_RECEP_F1_2 domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000078297.10.000e+0100.00SMESG000078297.1[more]
SMESG000078297.10.000e+0100.00SMESG000078297.1[more]
SMESG000002195.14.075e-2128.86SMESG000002195.1[more]
SMESG000046589.19.298e-2126.25SMESG000046589.1[more]
SMESG000073832.16.786e-2033.79SMESG000073832.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30025000 ID=SMED30025000|Name=G_PROTEIN_RECEP_F1_2 domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1483bp
CAAAACTAACCAATATTATTCCATCATATATGATGAATGTATTCATTACA
ACATAAAAAAATGTCATTTAACACGTTATTCTACTTGAATAGTGTGATGA
ATGACGTTAAATTCTAATTTAATAAAGAATTCATTTAATTTTTTGTCTCA
AAAGGAATTTATATTAATATTTTTCTAAAAATGAAATTTGATGCAGAAAA
CTTATTGGATAGAATGAAATTTAAAGATCCATGTGTAATGAGAAGACTTT
TTCAACAAATAAATCGTCCATCTAATGATTCCAATAACTCAATCAACTGT
TCTGATCCCATTAAAATCCTCAACATTACTGGTATACCAGATTTAGATAT
CCATTCTGTATATCTATACGTATATGTTATTGTCACCGGACTTTTATTAA
CTCTGGGCCTGACAGGAAACTGCATTTGTCTTCATGTTGCAATGACTAGG
AAATTAATACGCCAAGCTTCATCTCAATATTTCTTTGTGTTTTCCTTGTG
TGATGTATTAGTTTTGGTATTTTACGTGTTGCCAGAATGGCTAGAAAGAG
GTGTCTATCAGTTATCACATATAGAAATGTTGAGGTTAAATGCAATTCAA
GGAATTTGTCAAATATTTTTATTTTTATCATATTGGTTACGATTTTTATC
AGTTTGGATTCTGGTCATATATTCGATTGAACGTTATATAAATCTTCGAA
ATCCATTCTACAGAAAACGGCTGTGTCGAAAATTTAGTAACGCAAAACTA
ATAGCCGGCCTTGGGTCTGTCTCAATACTAATAACTTTATGGAAAACTTT
GAGCAGCAGAGTTCAAGCAACGGGAAACGGTGGTATACTTATTTGCGCTG
GAGAAAATCAAAAGGAAATGCATAATTTTATATATGATTGCATTTACGCT
GCTTTCATTATCATAATTCCTTCGTTTCTCATTCTTATATTCAACGCCCT
GATTGCGCGGCATTTATTTATTATTCGTAAGAAAAACGATTCTTGCCTAA
GCCATCAAGAACTAATTGGATTTCAGTTTGCAGGACTATTGGTACTTATT
TCCTTTTGTTTTCTAATTCTCACGTGGCCATATTACTTTTGTTGGATCCA
CGATTATTGGGTCCACTATCAAATACTGAACAAATTTCCATCGAATGGAA
CAGACGCGTTGGGTTCAATTTCAAATCAGCTGAAAGAATGGAAACTTTCT
AATGAAATCAAATCAATCACAAGAATAATATTTTATTCTCATTTTAGTAG
TAATTTCTTTCTCTACACATTCACGAGCCGATTTTTTCGAGCAGAAATGA
AACGACTGTTCACTTTGAGATCTCTCAGAAAACGAGCTCGTCAATTTTAT
ACGGATGAATATTTAATTGACAAACAACTTTTGGTTAATCAAAACGGAGT
TGATCAAGAAACTCAGAATAATATTAATTTTTTAAAAGATCATCTTTCTT
TGAATACTATTTAGGTTCAAAAAGTATATTTAA
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protein sequence of SMED30025000-orf-1

>SMED30025000-orf-1 ID=SMED30025000-orf-1|Name=SMED30025000-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=428bp
MKFDAENLLDRMKFKDPCVMRRLFQQINRPSNDSNNSINCSDPIKILNIT
GIPDLDIHSVYLYVYVIVTGLLLTLGLTGNCICLHVAMTRKLIRQASSQY
FFVFSLCDVLVLVFYVLPEWLERGVYQLSHIEMLRLNAIQGICQIFLFLS
YWLRFLSVWILVIYSIERYINLRNPFYRKRLCRKFSNAKLIAGLGSVSIL
ITLWKTLSSRVQATGNGGILICAGENQKEMHNFIYDCIYAAFIIIIPSFL
ILIFNALIARHLFIIRKKNDSCLSHQELIGFQFAGLLVLISFCFLILTWP
YYFCWIHDYWVHYQILNKFPSNGTDALGSISNQLKEWKLSNEIKSITRII
FYSHFSSNFFLYTFTSRFFRAEMKRLFTLRSLRKRARQFYTDEYLIDKQL
LVNQNGVDQETQNNINFLKDHLSLNTI*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000418head
PLANA:0003104enteric muscle cell
Vocabulary: INTERPRO
TermDefinition
IPR000276GPCR_Rhodpsn
IPR017452GPCR_Rhodpsn_7TM
Vocabulary: biological process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007165signal transduction
Vocabulary: molecular function
TermDefinition
GO:0004930G-protein coupled receptor activity
GO:0004871signal transducer activity
Vocabulary: cellular component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000276G protein-coupled receptor, rhodopsin-likePRINTSPR00237GPCRRHODOPSNcoord: 150..172
score: 24.13
coord: 344..370
score: 23.15
coord: 64..88
score: 18.97
IPR000276G protein-coupled receptor, rhodopsin-likePFAMPF000017tm_1coord: 79..310
e-value: 2.2E-10
score: 40.3
NoneNo IPR availableGENE3DG3DSA:1.20.1070.10coord: 54..389
e-value: 1.7E-35
score: 124.5
NoneNo IPR availablePANTHERPTHR46641FAMILY NOT NAMEDcoord: 61..398
NoneNo IPR availablePANTHERPTHR46641:SF12CNMAMIDE RECEPTORcoord: 61..398
NoneNo IPR availableCDDcd149787tmA_FMRFamide_R-likecoord: 89..373
e-value: 5.82295E-15
score: 73.0508
NoneNo IPR availableSUPERFAMILYSSF81321Family A G protein-coupled receptor-likecoord: 47..385
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 185..204
NoneNo IPR availableTMHMMTMhelixcoord: 142..164
NoneNo IPR availableTMHMMTMhelixcoord: 279..301
NoneNo IPR availableTMHMMTMhelixcoord: 349..371
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 237..259
IPR017452GPCR, rhodopsin-like, 7TMPROSITEPS50262G_PROTEIN_RECEP_F1_2coord: 79..362
score: 17.884