Transformer-2 beta

Overview
NameTransformer-2 beta
Smed IDSMED30024961
Length (bp)1281
Neoblast Clusters

Zeng et. al., 2018




▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 



 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)




Explore this single cell expression dataset with our NB Cluster Shiny App




 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Transformer-2 beta (SMED30024961) t-SNE clustered cells

Violin plots show distribution of expression levels for Transformer-2 beta (SMED30024961) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Transformer-2 beta (SMED30024961) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Transformer-2 beta (SMED30024961) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017




Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020




SMED30024961

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 6

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30024961h1SMcG0015449 SmedASXL_006885SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
X2 cellSMED30024961h1SMcG0015449 SmedASXL_006885SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015
FACS sorted cell population asexual adult RNA-sequencing evidence
nervous systemSMED30024961h1SMcG0015449 dd_Smed_v4_4073_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30024961h1SMcG0015449 dd_Smed_v4_4073_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30024961h1SMcG0015449 dd_Smed_v4_4073_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30024961h1SMcG0015449 dd_Smed_v4_4073_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018
FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781])

HSP 1 Score: 123.25 bits (308), Expect = 1.802e-31
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            S+S SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:   95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781])

HSP 1 Score: 117.087 bits (292), Expect = 2.510e-30
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  253 VKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
             +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:    3 TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 110          
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645])

HSP 1 Score: 114.39 bits (285), Expect = 2.398e-29
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:    4 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110          
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645])

HSP 1 Score: 114.39 bits (285), Expect = 2.464e-29
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:    4 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110          
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645])

HSP 1 Score: 114.39 bits (285), Expect = 2.464e-29
Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:    4 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110          
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77])

HSP 1 Score: 94.3597 bits (233), Expect = 2.181e-21
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567
            ENP+P  C+GVF LS  T E++LR+ F +FG I    L+ D+    S G+GFI +  ++ AT A  +    ++DG  IRVD+S+TK+ H+PTPG Y
Sbjct:   70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQY 165          
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77])

HSP 1 Score: 94.3597 bits (233), Expect = 2.181e-21
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567
            ENP+P  C+GVF LS  T E++LR+ F +FG I    L+ D+    S G+GFI +  ++ AT A  +    ++DG  IRVD+S+TK+ H+PTPG Y
Sbjct:   70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQY 165          
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: exc-7 (pep chromosome:WBcel235:II:9575971:9581490:1 gene:WBGene00001368.1 transcript:F35H8.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:exc-7)

HSP 1 Score: 58.151 bits (139), Expect = 5.252e-9
Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 1
Query:  319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS 528
            L +   + E+R  F   G I++  L+ DK   +SLGYGF+NY   + A RA+   NG+ +  K I+V Y+
Sbjct:   49 LPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118          

HSP 2 Score: 51.9878 bits (123), Expect = 5.559e-7
Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 1
Query:  301 CIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTP 552
            C+ V+ LS  TD+  L + F +FG I  V ++ D  Q +  GY F++  +   A  A+   NG N+ GK ++V +    K+ TP
Sbjct:  375 CLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVF----KSSTP 453          
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8])

HSP 1 Score: 56.225 bits (134), Expect = 1.190e-8
Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 1
Query:  319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKT 579
            LS   D ++LRE F+ FG +    +I D    +S GYGF++Y   + A RAI++ NG  +  + IR +++  K      P  Y  K+
Sbjct:   29 LSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 115          
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8])

HSP 1 Score: 56.225 bits (134), Expect = 1.337e-8
Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 1
Query:  319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKT 579
            LS   D ++LRE F+ FG +    +I D    +S GYGF++Y   + A RAI++ NG  +  + IR +++  K      P  Y  K+
Sbjct:   39 LSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 125          
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089616)

HSP 1 Score: 101.293 bits (251), Expect = 5.908e-25
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            E+P+   CIGVFGL+  T + ++RE F K+G I+ + +++D     S G+ FI +E L  A  A    +G+ +DG+ IRVD+SIT++AHTPTPG Y G+
Sbjct:    6 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 104          
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089615)

HSP 1 Score: 100.908 bits (250), Expect = 2.430e-24
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            E+P+   CIGVFGL+  T + ++RE F K+G I+ + +++D     S G+ FI +E L  A  A    +G+ +DG+ IRVD+SIT++AHTPTPG Y G+
Sbjct:   53 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 151          
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089619)

HSP 1 Score: 100.908 bits (250), Expect = 2.430e-24
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            E+P+   CIGVFGL+  T + ++RE F K+G I+ + +++D     S G+ FI +E L  A  A    +G+ +DG+ IRVD+SIT++AHTPTPG Y G+
Sbjct:   53 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 151          
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089620)

HSP 1 Score: 100.908 bits (250), Expect = 5.063e-24
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            E+P+   CIGVFGL+  T + ++RE F K+G I+ + +++D     S G+ FI +E L  A  A    +G+ +DG+ IRVD+SIT++AHTPTPG Y G+
Sbjct:   91 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189          
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089621)

HSP 1 Score: 100.908 bits (250), Expect = 5.063e-24
Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1
Query:  280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            E+P+   CIGVFGL+  T + ++RE F K+G I+ + +++D     S G+ FI +E L  A  A    +G+ +DG+ IRVD+SIT++AHTPTPG Y G+
Sbjct:   91 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189          
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 114.39 bits (285), Expect = 1.909e-29
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1
Query:  217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            R K + SRS      K  ++N+     NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D A  A++  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   74 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 198          
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 114.39 bits (285), Expect = 1.909e-29
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1
Query:  217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            R K + SRS      K  ++N+     NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D A  A++  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   74 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 198          
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 114.775 bits (286), Expect = 1.705e-28
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1
Query:  217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            R K + SRS      K  ++N+     NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D A  A++  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:  103 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227          
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 114.39 bits (285), Expect = 1.983e-28
Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1
Query:  217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            R K + SRS      K  ++N+     NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D A  A++  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:  103 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227          
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094])

HSP 1 Score: 110.538 bits (275), Expect = 3.195e-27
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1
Query:  244 PSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P   +R+   +  NP+P  C+GVFGLS  T ER+LRE F K+G +  V ++ D+    S G+ F+ +E+ + +  A +  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:  105 PMSNRRRHIGDRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFAFVYFENREDSKEAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 215          
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: rit1 (Ras-like without CAAX 1 [Source:Xenbase;Acc:XB-GENE-5777077])

HSP 1 Score: 120.168 bits (300), Expect = 4.360e-30
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 1
Query:  241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:  134 SPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 245          
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: plekhg5 (pleckstrin homology and RhoGEF domain containing G5 [Source:Xenbase;Acc:XB-GENE-6039487])

HSP 1 Score: 115.161 bits (287), Expect = 1.223e-28
Identity = 52/112 (46.43%), Postives = 75/112 (66.96%), Query Frame = 1
Query:  241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            SP   +R+   +  NP+P  CIGVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E ++ +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:   95 SPMSNRRRHNGSRANPDPNICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 206          
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982])

HSP 1 Score: 55.8398 bits (133), Expect = 9.856e-9
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522
            V GL+  T E  L + F K+G++  V ++ D+    S G+GF+ +E+ + A  A+   NG ++DG+ IRVD
Sbjct:   22 VGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92          
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982])

HSP 1 Score: 55.8398 bits (133), Expect = 1.037e-8
Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522
            V GL+  T E  L + F K+G++  V ++ D+    S G+GF+ +E+ + A  A+   NG ++DG+ IRVD
Sbjct:   22 VGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92          
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: elavl1 (ELAV like RNA binding protein 1 [Source:NCBI gene;Acc:448062])

HSP 1 Score: 57.7658 bits (138), Expect = 1.164e-8
Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 1
Query:  319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS 528
            L +   + ELR  F   G +++  LI DK    SLGYGF+NY +   A RAI   NG+ +  K I+V ++
Sbjct:   27 LPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFA 96          
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016])

HSP 1 Score: 123.25 bits (308), Expect = 1.237e-31
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            S+S SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:   95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016])

HSP 1 Score: 117.087 bits (292), Expect = 1.723e-30
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 1
Query:  253 VKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
             +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:    3 TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 110          
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972])

HSP 1 Score: 116.701 bits (291), Expect = 2.328e-29
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 1
Query:  241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            SP   +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:   98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 209          
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972])

HSP 1 Score: 116.701 bits (291), Expect = 2.430e-29
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 1
Query:  241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            SP   +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:   98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 209          
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Cirbp (cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588])

HSP 1 Score: 63.5438 bits (153), Expect = 1.938e-11
Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522
            V GLS  T+E+ L + F K+G+I  V ++ D+    S G+GF+ +E++D A  A+   NG ++DG+ IRVD
Sbjct:   10 VGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80          
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|P62997|TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            S+S SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:   95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|P62996|TRA2B_MOUSE (Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            S+S SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:   95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|P62995|TRA2B_HUMAN (Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            S+S SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:   95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|Q3ZBT6|TRA2B_BOVIN (Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31
Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query:  229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            S+S SP   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G I  V+++ D+    S G+ F+ +E++D A  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:   95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|Q6PFR5|TRA2A_MOUSE (Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.664e-28
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 1
Query:  241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            SP   +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+AHTPTPG Y G+
Sbjct:   98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 209          
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3B3CGK9 (Transformer 2 alpha homolog OS=Oryzias melastigma OX=30732 PE=4 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 5.930e-31
Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R KRS + SP   +R+     ENP+P +C+GVFGL+  T ER+LRE F ++GR+  + ++ D+    S G+ FI +E L  A  AI++ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   81 PEHRRKRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEQTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 203          
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A437CW16 (RRM domain-containing protein OS=Oryzias javanicus OX=123683 GN=OJAV_G00111960 PE=4 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.427e-30
Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R +RS + SP   +R+     ENP+P +C+GVFGL+  T ER+LRE F ++GR+  + ++ D+    S G+ FI +E L  A  AI++ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   79 PEHRRRRSQNTSPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEQTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201          
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3P9K3F4 (Transformer 2 alpha homolog OS=Oryzias latipes OX=8090 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.728e-30
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R +RS + SP   +R+     ENP+P +C+GVFGL+  T ER+LRE F ++GR+  + ++ D+    S G+ FI +E L  A  AI+  NGMN+DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201          
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3B3H7T6 (Transformer 2 alpha homolog OS=Oryzias latipes OX=8090 GN=LOC101157868 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.794e-30
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R +RS + SP   +R+     ENP+P +C+GVFGL+  T ER+LRE F ++GR+  + ++ D+    S G+ FI +E L  A  AI+  NGMN+DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201          
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3P9I3E4 (Transformer 2 alpha homolog OS=Oryzias latipes OX=8090 PE=4 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.962e-30
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R +RS + SP   +R+     ENP+P +C+GVFGL+  T ER+LRE F ++GR+  + ++ D+    S G+ FI +E L  A  AI+  NGMN+DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201          
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 120.939 bits (302), Expect = 2.381e-31
Identity = 56/123 (45.53%), Postives = 81/123 (65.85%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R +RS S SP   +R+   +  NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   77 PEYRRRRSQSTSPMSNRRRHAGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 199          
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: ENSAMXT00000034164.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:6544829:6548035:1 gene:ENSAMXG00000039469.1 transcript:ENSAMXT00000034164.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 112.079 bits (279), Expect = 6.245e-29
Identity = 49/107 (45.79%), Postives = 73/107 (68.22%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G + +V+++ D+    S G+ F+ +E+ + +  A +  NGM +DG+ IRVDYSIT++ HTPTPG Y G+
Sbjct:    4 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSSVSIVYDQQSRRSRGFAFVYFENREDSREAKERANGMELDGRRIRVDYSITQRPHTPTPGIYMGR 110          
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 112.849 bits (281), Expect = 1.402e-28
Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 1
Query:  283 NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            NP+P +C+GVFGLS  T ER+LRE F ++G +  V ++ D+    S G+ F+ +E +D +  A++  NGM +DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:  130 NPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227          
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: tra2b (transformer-2 protein homolog alpha-like [Source:NCBI gene;Acc:103029311])

HSP 1 Score: 111.694 bits (278), Expect = 1.545e-27
Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1
Query:  244 PSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G +  V ++ D+    S G+ F+ +E+ + +  A +  NGM +DG+ IRVD+SITK+ HTPTPG Y G+
Sbjct:  100 PMSNRRRHIGNRANPDPTCCLGVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENREDSQEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210          
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:103022315])

HSP 1 Score: 60.4622 bits (145), Expect = 1.285e-9
Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522
            + GL+  T E+ L   F KFGRI  V L+ D+  ++S G+ F+ YE+   A  A +E NG  +DGK I+V+
Sbjct:   12 IGGLNTETTEKALESYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARELNGKALDGKPIKVE 82          
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391])

HSP 1 Score: 115.161 bits (287), Expect = 9.061e-30
Identity = 51/117 (43.59%), Postives = 80/117 (68.38%), Query Frame = 1
Query:  226 RSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            R +SRSP   +R+   +  NP+P  C+GVFGLS  T E++L+E F ++G +++V ++ D+    S G+ F+ +++ + A  A +  NGM +DG+ IRVD+SITK+AHTPTPG Y G+
Sbjct:   88 RRHSRSPMSNRRRHLGSRVNPDPSCCLGVFGLSLHTGEKDLKEVFSRYGPVQSVNVVYDQQSGRSRGFAFVYFDNSEDAKEAKERANGMELDGRYIRVDFSITKRAHTPTPGIYMGR 204          
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094])

HSP 1 Score: 108.997 bits (271), Expect = 2.324e-27
Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 1
Query:  232 YSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582
            ++ SP   +R+ + +  NPEP +C+GVFGLS  T E +LRE F ++G +  V ++ D+      G+ F+  ++++ +  A +  NGM +DG++IRVD+SITK+AHTPTPG Y G+ S
Sbjct:   84 FTNSPFSNRRRHQGDRGNPEPNTCLGVFGLSLYTTEHDLREVFGRYGPVADVNVVYDQQSGRPRGFAFVYMQNMEDSKEAKERVNGMELDGRNIRVDFSITKRAHTPTPGIYMGRPS 200          
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: srsf2b (serine and arginine rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420])

HSP 1 Score: 53.5286 bits (127), Expect = 1.631e-8
Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 1
Query:  292 PCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTP 552
            P   + V  L+ RT    LR +FEK+G +  V +  D++  ES G+ F+ + D   A  A+   +G  +DG+++RV  +   +   P
Sbjct:    6 PSRALQVDNLTYRTSPEMLRRSFEKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDAMDAMDGKMLDGRELRVQVARYSRPADP 92          
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860])

HSP 1 Score: 53.9138 bits (128), Expect = 2.923e-8
Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPG 561
            V GL+  T E+ L  TF K+GR+  V L+ D+  + S G+ F+ + + + A  A ++ NG  ++G+ +RVD   TK +    PG
Sbjct:   11 VGGLNIDTTEKALEATFSKYGRVADVLLMKDRETNLSRGFAFVTFANPEDAKEAERDANGKVLEGRAMRVD-QATKPSFESFPG 93          
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860])

HSP 1 Score: 53.1434 bits (126), Expect = 5.876e-8
Identity = 24/71 (33.80%), Postives = 43/71 (60.56%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522
            + GLS  T+E  L   F K+GR+  V ++ D+  + S G+ F+ + + D A  A ++ NG  +DG++I+V+
Sbjct:   11 IGGLSTDTNENALETIFSKYGRVAEVLIMKDRETNRSRGFAFVTFANPDDAKGAERDMNGKPLDGRNIKVE 81          
BLAST of Transformer-2 beta vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391])

HSP 1 Score: 54.299 bits (129), Expect = 1.562e-8
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 1
Query:  262 KGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKA 543
            K + N E  EP + I V  LS   D+  L++ FE  G +    +I ++    S GYG++++E+   A +AI+E  G  IDG+ I  D S +K A
Sbjct:  157 KKQKNEETEEPAT-IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPA 249          
BLAST of Transformer-2 beta vs. Ensembl Yeast
Match: RIE1 (Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts with Rbg1p in a two-hybrid assay; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003482])

HSP 1 Score: 52.7582 bits (125), Expect = 6.101e-8
Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 1
Query:  304 IGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKK 540
            I V G++K     EL   F K+G I ++ LI DK + E  GYGFI+Y     A+  IKE NG  ++G  + ++Y + +K
Sbjct:  197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINYHVERK 275          
BLAST of Transformer-2 beta vs. Ensembl Yeast
Match: SNP1 (Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001323])

HSP 1 Score: 45.8246 bits (107), Expect = 6.219e-6
Identity = 28/80 (35.00%), Postives = 40/80 (50.00%), Query Frame = 1
Query:  268 RTNNENP---------EPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKE 480
            R  N NP         +P   I +  L    DE EL++ F KFG I+ + ++ DK   +S GY FI ++D  S+  A KE
Sbjct:   88 RLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKE 167          
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO44802 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUS7])

HSP 1 Score: 120.939 bits (302), Expect = 2.125e-32
Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582
            P  + +R+ S SP   +++ + N +NP P  C+GVFGLS  T ER+LR  FEK+G ++ + ++ D     S G+GF+ YED   A  A +   G+ +DG+ IRVDYS+TK+AHTPTPG Y GK S
Sbjct:   65 PYYKGRRNSSHSPLSNRKRHQGNRDNPSPSRCLGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQTGRSRGFGFVYYEDTKDAEVAKERTTGIELDGRRIRVDYSVTKRAHTPTPGVYMGKAS 189          
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO32492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUY1])

HSP 1 Score: 55.8398 bits (133), Expect = 6.110e-9
Identity = 33/103 (32.04%), Postives = 57/103 (55.34%), Query Frame = 1
Query:  259 RKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567
            ++G TNN        I V  L++  D   LR+TFE FG I  V ++ D  +++S G+GF+++   + A +AI E + + I GK ++ +++  K  + PT   Y
Sbjct:   79 KRGDTNNHFH-----IFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK--NNPTQSKY 174          
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO29519 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3E7])

HSP 1 Score: 52.373 bits (124), Expect = 3.122e-8
Identity = 25/85 (29.41%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  298 SCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTP 552
            S + ++ L +   + +L +TF+ FG + +  + +DK  + S  +GF++Y+++ SA  AI+  NG  I  K ++V     K A+ P
Sbjct:   74 SNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPKDANRP 158          
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO44931 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUM9])

HSP 1 Score: 49.6766 bits (117), Expect = 5.760e-8
Identity = 23/70 (32.86%), Postives = 42/70 (60.00%), Query Frame = 1
Query:  310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRV 519
            V  L++  ++  ++E F  +GR+KTV L  D+  + S G+ ++ Y D +   +A+K  +G  IDG++I V
Sbjct:    5 VAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIAV 74          
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO38445 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCR4])

HSP 1 Score: 53.9138 bits (128), Expect = 8.550e-8
Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 1
Query:  277 NENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS 528
            ++NP P S + V  LS  T    L   FE     K   +I D+   ES G+GF++Y+D+++A + + E  G  +DG+ +R+D++
Sbjct:  471 DQNP-PNSSLIVRNLSYDTTTDSLGAAFEGCSNAK---VIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFA 550          
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2a (transformer-2 protein homolog alpha [Source:NCBI gene;Acc:101157868])

HSP 1 Score: 127.872 bits (320), Expect = 1.052e-33
Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1
Query:  208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P  R +RS + SP   +R+     ENP+P +C+GVFGL+  T ER+LRE F ++GR+  + ++ D+    S G+ FI +E L  A  AI+  NGMN+DG+ IRVDYSITK+ HTPTPG Y G+
Sbjct:   79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201          
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2a (transformer 2a [Source:NCBI gene;Acc:100049284])

HSP 1 Score: 114.39 bits (285), Expect = 1.205e-28
Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1
Query:  244 PSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576
            P   +R+   N  NP+P  C+GVFGLS  T ER+LRE F K+G +  V ++ D+    S G+ F+ +E+ + +  A ++ NGM +DG+ IRVD+SITK+AHTPTPG Y G+
Sbjct:   97 PMSNRRRHIGNRGNPDPSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMELDGRRIRVDFSITKRAHTPTPGIYMGR 207          
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285])

HSP 1 Score: 107.842 bits (268), Expect = 2.858e-26
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567
            +R+   N  NP+P +C+GVFGLS  T ER+L++ F K+G +  V+++ D+    S G+ F+ +E+   A  A ++ NGM +DG+ IRVD+SITK+ HTPTPG Y
Sbjct:  108 RRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 211          
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285])

HSP 1 Score: 107.842 bits (268), Expect = 4.446e-26
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567
            +R+   N  NP+P +C+GVFGLS  T ER+L++ F K+G +  V+++ D+    S G+ F+ +E+   A  A ++ NGM +DG+ IRVD+SITK+ HTPTPG Y
Sbjct:  117 RRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 220          
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285])

HSP 1 Score: 107.457 bits (267), Expect = 5.080e-26
Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1
Query:  256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567
            +R+   N  NP+P +C+GVFGLS  T ER+L++ F K+G +  V+++ D+    S G+ F+ +E+   A  A ++ NGM +DG+ IRVD+SITK+ HTPTPG Y
Sbjct:  103 RRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 206          
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000052833.1 (SMESG000052833.1)

HSP 1 Score: 276.174 bits (705), Expect = 3.624e-91
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1
Query:   79 MSNWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINDKYPPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582
            MSNWKNSSVESGSNRSNSSNRSFKNFHSRSRSQSRSASINDKYPPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS
Sbjct:    1 MSNWKNSSVESGSNRSNSSNRSFKNFHSRSRSQSRSASINDKYPPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 168          
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000052829.1 (SMESG000052829.1)

HSP 1 Score: 170.629 bits (431), Expect = 5.364e-50
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1
Query:  286 PEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582
            PEPC CIGVFGL+KRT+E+ L ETFEKFGRI +V LIMDKY  ESLGYGFINYEDL SATRA+KE +GMN+DGK IRVDYSITKKAHTPTPG Y GK S
Sbjct:   73 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 171          
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000052838.1 (SMESG000052838.1)

HSP 1 Score: 147.132 bits (370), Expect = 7.827e-40
Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 1
Query:  274 NNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGT-YKGK 576
            NN  P+P +CIG+FGLSK+T ER L +TF  FG+IK+V+LI+DK+  ESLG+ FINYE+LDSAT AIKE NGM +D K +RVDYSITKKA+TPTPG+ YKGK
Sbjct:   52 NNTTPDPSTCIGIFGLSKKTSERTLWKTFGNFGKIKSVSLIVDKFTKESLGFAFINYEELDSATNAIKETNGMTLDSKVVRVDYSITKKAYTPTPGSGYKGK 153          
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1)

HSP 1 Score: 125.561 bits (314), Expect = 2.025e-33
Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 1
Query:  274 NNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582
            + +NP+P +CIGVFGLS +TDE++L   F+K+G IK V L++D Y   S G+GFI YE+++SA  A    +G+ IDG+ +R+DYSIT+KAHTPTPG Y GK S
Sbjct:   79 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 181          
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1)

HSP 1 Score: 125.561 bits (314), Expect = 2.165e-33
Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 1
Query:  274 NNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582
            + +NP+P +CIGVFGLS +TDE++L   F+K+G IK V L++D Y   S G+GFI YE+++SA  A    +G+ IDG+ +R+DYSIT+KAHTPTPG Y GK S
Sbjct:   80 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 182          
The following BLAST results are available for this feature:
BLAST of Transformer-2 beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
TRA2B1.802e-3148.28transformer 2 beta homolog [Source:HGNC Symbol;Acc... [more]
TRA2B2.510e-3048.15transformer 2 beta homolog [Source:HGNC Symbol;Acc... [more]
TRA2A2.398e-2946.73transformer 2 alpha homolog [Source:HGNC Symbol;Ac... [more]
TRA2A2.464e-2946.73transformer 2 alpha homolog [Source:HGNC Symbol;Ac... [more]
TRA2A2.464e-2946.73transformer 2 alpha homolog [Source:HGNC Symbol;Ac... [more]
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BLAST of Transformer-2 beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rsp-82.181e-2144.79SR Protein (Splicing factor) [Source:UniProtKB/Tr... [more]
rsp-82.181e-2144.79SR Protein (Splicing factor) [Source:UniProtKB/Tr... [more]
exc-75.252e-937.14pep chromosome:WBcel235:II:9575971:9581490:1 gene:... [more]
tiar-11.190e-833.33TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
tiar-11.337e-833.33TIA-1/TIAL RNA binding protein homolog [Source:Un... [more]
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BLAST of Transformer-2 beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tra25.908e-2544.44gene:FBgn0003742 transcript:FBtr0089616[more]
tra22.430e-2444.44gene:FBgn0003742 transcript:FBtr0089615[more]
tra22.430e-2444.44gene:FBgn0003742 transcript:FBtr0089619[more]
tra25.063e-2444.44gene:FBgn0003742 transcript:FBtr0089620[more]
tra25.063e-2444.44gene:FBgn0003742 transcript:FBtr0089621[more]
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BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tra2a1.909e-2944.80transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
tra2a1.909e-2944.80transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
tra2a1.705e-2844.80transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
tra2a1.983e-2844.80transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
tra2b3.195e-2745.05transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GE... [more]
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BLAST of Transformer-2 beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
rit14.360e-3048.21Ras-like without CAAX 1 [Source:Xenbase;Acc:XB-GEN... [more]
plekhg51.223e-2846.43pleckstrin homology and RhoGEF domain containing G... [more]
cirbp9.856e-936.62cold inducible RNA binding protein [Source:NCBI ge... [more]
cirbp1.037e-836.62cold inducible RNA binding protein [Source:NCBI ge... [more]
elavl11.164e-838.57ELAV like RNA binding protein 1 [Source:NCBI gene;... [more]
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BLAST of Transformer-2 beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Tra2b1.237e-3148.28transformer 2 beta [Source:MGI Symbol;Acc:MGI:1060... [more]
Tra2b1.723e-3048.15transformer 2 beta [Source:MGI Symbol;Acc:MGI:1060... [more]
Tra2a2.328e-2946.43transformer 2 alpha [Source:MGI Symbol;Acc:MGI:193... [more]
Tra2a2.430e-2946.43transformer 2 alpha [Source:MGI Symbol;Acc:MGI:193... [more]
Cirbp1.938e-1140.85cold inducible RNA binding protein [Source:MGI Sym... [more]
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BLAST of Transformer-2 beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P62997|TRA2B_RAT8.651e-3148.28Transformer-2 protein homolog beta OS=Rattus norve... [more]
sp|P62996|TRA2B_MOUSE8.651e-3148.28Transformer-2 protein homolog beta OS=Mus musculus... [more]
sp|P62995|TRA2B_HUMAN8.651e-3148.28Transformer-2 protein homolog beta OS=Homo sapiens... [more]
sp|Q3ZBT6|TRA2B_BOVIN8.651e-3148.28Transformer-2 protein homolog beta OS=Bos taurus O... [more]
sp|Q6PFR5|TRA2A_MOUSE1.664e-2846.43Transformer-2 protein homolog alpha OS=Mus musculu... [more]
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BLAST of Transformer-2 beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A3B3CGK95.930e-3148.78Transformer 2 alpha homolog OS=Oryzias melastigma ... [more]
A0A437CW161.427e-3047.97RRM domain-containing protein OS=Oryzias javanicus... [more]
A0A3P9K3F42.728e-3047.97Transformer 2 alpha homolog OS=Oryzias latipes OX=... [more]
A0A3B3H7T62.794e-3047.97Transformer 2 alpha homolog OS=Oryzias latipes OX=... [more]
A0A3P9I3E42.962e-3047.97Transformer 2 alpha homolog OS=Oryzias latipes OX=... [more]
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BLAST of Transformer-2 beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tra2a2.381e-3145.53transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
ENSAMXT00000034164.16.245e-2945.79pep primary_assembly:Astyanax_mexicanus-2.0:12:654... [more]
tra2a1.402e-2848.98transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
tra2b1.545e-2745.05transformer-2 protein homolog alpha-like [Source:N... [more]
rbmx1.285e-940.85RNA binding motif protein X-linked [Source:NCBI ge... [more]
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BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tra2a9.061e-3043.59transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-G... [more]
tra2b2.324e-2741.88transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GE... [more]
srsf2b1.631e-829.89serine and arginine rich splicing factor 2b [Sourc... [more]
rbmx2.923e-834.52RNA binding motif protein X-linked [Source:NCBI ge... [more]
rbmx5.876e-833.80RNA binding motif protein X-linked [Source:NCBI ge... [more]
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BLAST of Transformer-2 beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 3
Match NameE-valueIdentityDescription
NSR11.562e-835.11Nucleolar protein that binds nuclear localization ... [more]
RIE16.101e-837.97Putative RNA binding protein; localizes to stress ... [more]
SNP16.219e-635.00Component of U1 snRNP required for mRNA splicing v... [more]
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BLAST of Transformer-2 beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5
Match NameE-valueIdentityDescription
EDO448022.125e-3245.60Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO324926.110e-932.04Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO295193.122e-829.41Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO449315.760e-832.86Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO384458.550e-833.33Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Transformer-2 beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
tra2a1.052e-3347.97transformer-2 protein homolog alpha [Source:NCBI g... [more]
tra2a1.205e-2845.95transformer 2a [Source:NCBI gene;Acc:100049284][more]
tra2b2.858e-2645.19transformer 2 beta homolog [Source:NCBI gene;Acc:1... [more]
tra2b4.446e-2645.19transformer 2 beta homolog [Source:NCBI gene;Acc:1... [more]
tra2b5.080e-2645.19transformer 2 beta homolog [Source:NCBI gene;Acc:1... [more]
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BLAST of Transformer-2 beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000052833.13.624e-91100.00SMESG000052833.1[more]
SMESG000052829.15.364e-5079.80SMESG000052829.1[more]
SMESG000052838.17.827e-4067.65SMESG000052838.1[more]
SMESG000031644.12.025e-3354.37SMESG000031644.1[more]
SMESG000031644.12.165e-3354.37SMESG000031644.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024961 ID=SMED30024961|Name=Transformer-2 beta|organism=Schmidtea mediterranea sexual|type=transcript|length=1281bp
AAAATGCAAATTTTTTAAACTTTGTTTATTTTAGTGTGCTTAAATTAAAT
TTTTTTGTAAAAATCATTTTTCTTAAGTATGAGTAATTGGAAAAATAGTT
CCGTTGAAAGTGGAAGCAATCGGAGCAATTCTTCCAATAGATCATTTAAA
AATTTTCATAGTCGATCCAGGTCCCAATCACGAAGTGCATCCATTAATGA
TAAATATCCACCTCAACGGTCCAAAAGATCTTATTCTCGCTCGCCATCCG
TAGTGAAGCGTAAAGGTCGAACTAATAATGAGAATCCTGAACCGTGTTCA
TGTATAGGTGTGTTTGGATTATCAAAAAGAACTGATGAACGAGAGTTACG
AGAAACATTTGAAAAATTTGGAAGAATAAAAACAGTAACATTAATAATGG
ATAAATATCAACATGAATCGCTTGGATATGGATTCATTAATTATGAAGAT
CTTGATTCAGCTACTAGAGCTATTAAAGAAGGAAATGGAATGAATATTGA
CGGCAAAGATATTCGAGTCGATTATAGCATAACTAAAAAAGCTCATACTC
CAACTCCTGGGACATATAAAGGCAAAACTTCTAACAGGCGTAATAATGGG
TTTGATGGGAATAATCGCCGAAGAGATTTTTCTGATAGAAGAAGATCACG
GTCCAGAAGCTATGATAGAAGGGGATCTAATCGGAGGAGTCCGCCAAGGA
GAAGCCCTCCAAGATACTCATATAGTAAGCCATCTTATAACAGAAATTCT
TATAATCGAAGTCCGCCTATGAGAAGTTTTGACAGAAGATCAAGATCAAG
AAGTTATGAAAGGTCAAATAGACGGTATCATTAGTTAATGTAATAAACTT
TTCGGATTTATTAACTTTACGTTATTTCATTGAAAAATAAACAATGTCGT
GATTGCGCCAGCATTTTTATAGTATGAAATTGCTTTTTTATTTTTGTTAG
CATGCAGTTCATACTTATTTAATCAATGTAAAGTGGATAATAAACCTGAA
AGATTTATAAATAGTTTCAATCAATTTTATTCTTCTGGTGCATTATTATT
TGTGTATGTTATTCCAGCGCTATTTTTGAATTAATTCTGTTTGCCGCGTC
AATAGAAATCATGGTTCTGGCCTAATTTTATTACTATTGATGTTTCAGAA
TTTTAAATGTTAATAAAGTGTTCTAAATTTCTTTTTTACTTAATTTGTAG
TTATGTATTGAATTTTTAAACAATTTGATATTTATTTTCAAATTTAGGTT
TTGCTTTAGACGAGATTTTGCTCAATTTATC
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protein sequence of SMED30024961-orf-1

>SMED30024961-orf-1 ID=SMED30024961-orf-1|Name=SMED30024961-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=252bp
MSNWKNSSVESGSNRSNSSNRSFKNFHSRSRSQSRSASINDKYPPQRSKR
SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRI
KTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS
ITKKAHTPTPGTYKGKTSNRRNNGFDGNNRRRDFSDRRRSRSRSYDRRGS
NRRSPPRRSPPRYSYSKPSYNRNSYNRSPPMRSFDRRSRSRSYERSNRRY
H*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: molecular function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
PLANA:0002109X1 cell
PLANA:0002111X2 cell
Vocabulary: INTERPRO
TermDefinition
IPR035979RBD_domain_sf
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 75..148
e-value: 1.1E-19
score: 81.4
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 78..146
e-value: 1.1E-16
score: 60.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 74..152
score: 16.909
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3DG3DSA:3.30.70.330coord: 2..159
e-value: 5.6E-28
score: 99.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..203
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..231
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..174
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 87..150
NoneNo IPR availablePANTHERPTHR10352:SF25FOUND IN NEURONS, ISOFORM A-RELATEDcoord: 87..150
NoneNo IPR availablePANTHERPTHR10352:SF25FOUND IN NEURONS, ISOFORM A-RELATEDcoord: 85..150
NoneNo IPR availablePANTHERPTHR10352EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Gcoord: 85..150
NoneNo IPR availableCDDcd12363RRM_TRA2coord: 75..152
e-value: 1.07748E-32
score: 112.333
IPR035979RNA-binding domain superfamilySUPERFAMILYSSF54928RNA-binding domain, RBDcoord: 64..181