Transformer-2 beta
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024961 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Homology
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]) HSP 1 Score: 123.25 bits (308), Expect = 1.802e-31 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 S+S SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2B (transformer 2 beta homolog [Source:HGNC Symbol;Acc:HGNC:10781]) HSP 1 Score: 117.087 bits (292), Expect = 2.510e-30 Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 253 VKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 3 TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 110
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 114.39 bits (285), Expect = 2.398e-29 Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 4 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 114.39 bits (285), Expect = 2.464e-29 Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 4 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110
BLAST of Transformer-2 beta vs. Ensembl Human
Match: TRA2A (transformer 2 alpha homolog [Source:HGNC Symbol;Acc:HGNC:16645]) HSP 1 Score: 114.39 bits (285), Expect = 2.464e-29 Identity = 50/107 (46.73%), Postives = 74/107 (69.16%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 4 RRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 110
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77]) HSP 1 Score: 94.3597 bits (233), Expect = 2.181e-21 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567 ENP+P C+GVF LS T E++LR+ F +FG I L+ D+ S G+GFI + ++ AT A + ++DG IRVD+S+TK+ H+PTPG Y Sbjct: 70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQY 165
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: rsp-8 (SR Protein (Splicing factor) [Source:UniProtKB/TrEMBL;Acc:G3MU77]) HSP 1 Score: 94.3597 bits (233), Expect = 2.181e-21 Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567 ENP+P C+GVF LS T E++LR+ F +FG I L+ D+ S G+GFI + ++ AT A + ++DG IRVD+S+TK+ H+PTPG Y Sbjct: 70 ENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSPTPGQY 165
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: exc-7 (pep chromosome:WBcel235:II:9575971:9581490:1 gene:WBGene00001368.1 transcript:F35H8.5.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:exc-7) HSP 1 Score: 58.151 bits (139), Expect = 5.252e-9 Identity = 26/70 (37.14%), Postives = 40/70 (57.14%), Query Frame = 1 Query: 319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS 528 L + + E+R F G I++ L+ DK +SLGYGF+NY + A RA+ NG+ + K I+V Y+ Sbjct: 49 LPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKVSYA 118 HSP 2 Score: 51.9878 bits (123), Expect = 5.559e-7 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 1 Query: 301 CIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTP 552 C+ V+ LS TD+ L + F +FG I V ++ D Q + GY F++ + A A+ NG N+ GK ++V + K+ TP Sbjct: 375 CLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVF----KSSTP 453
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 56.225 bits (134), Expect = 1.190e-8 Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 1 Query: 319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKT 579 LS D ++LRE F+ FG + +I D +S GYGF++Y + A RAI++ NG + + IR +++ K P Y K+ Sbjct: 29 LSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 115
BLAST of Transformer-2 beta vs. Ensembl Celegans
Match: tiar-1 (TIA-1/TIAL RNA binding protein homolog [Source:UniProtKB/TrEMBL;Acc:Q95QV8]) HSP 1 Score: 56.225 bits (134), Expect = 1.337e-8 Identity = 29/87 (33.33%), Postives = 46/87 (52.87%), Query Frame = 1 Query: 319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKT 579 LS D ++LRE F+ FG + +I D +S GYGF++Y + A RAI++ NG + + IR +++ K P Y K+ Sbjct: 39 LSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKS 125
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089616) HSP 1 Score: 101.293 bits (251), Expect = 5.908e-25 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 E+P+ CIGVFGL+ T + ++RE F K+G I+ + +++D S G+ FI +E L A A +G+ +DG+ IRVD+SIT++AHTPTPG Y G+ Sbjct: 6 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 104
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089615) HSP 1 Score: 100.908 bits (250), Expect = 2.430e-24 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 E+P+ CIGVFGL+ T + ++RE F K+G I+ + +++D S G+ FI +E L A A +G+ +DG+ IRVD+SIT++AHTPTPG Y G+ Sbjct: 53 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 151
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089619) HSP 1 Score: 100.908 bits (250), Expect = 2.430e-24 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 E+P+ CIGVFGL+ T + ++RE F K+G I+ + +++D S G+ FI +E L A A +G+ +DG+ IRVD+SIT++AHTPTPG Y G+ Sbjct: 53 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 151
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089620) HSP 1 Score: 100.908 bits (250), Expect = 5.063e-24 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 E+P+ CIGVFGL+ T + ++RE F K+G I+ + +++D S G+ FI +E L A A +G+ +DG+ IRVD+SIT++AHTPTPG Y G+ Sbjct: 91 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189
BLAST of Transformer-2 beta vs. Ensembl Fly
Match: tra2 (gene:FBgn0003742 transcript:FBtr0089621) HSP 1 Score: 100.908 bits (250), Expect = 5.063e-24 Identity = 44/99 (44.44%), Postives = 66/99 (66.67%), Query Frame = 1 Query: 280 ENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 E+P+ CIGVFGL+ T + ++RE F K+G I+ + +++D S G+ FI +E L A A +G+ +DG+ IRVD+SIT++AHTPTPG Y G+ Sbjct: 91 EHPQASRCIGVFGLNTNTSQHKVRELFNKYGPIERIQMVIDAQTQRSRGFCFIYFEKLSDARAAKDSCSGIEVDGRRIRVDFSITQRAHTPTPGVYLGR 189
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 114.39 bits (285), Expect = 1.909e-29 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 R K + SRS K ++N+ NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D A A++ NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 74 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 198
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 114.39 bits (285), Expect = 1.909e-29 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 R K + SRS K ++N+ NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D A A++ NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 74 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 198
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 114.775 bits (286), Expect = 1.705e-28 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 R K + SRS K ++N+ NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D A A++ NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 103 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 114.39 bits (285), Expect = 1.983e-28 Identity = 56/125 (44.80%), Postives = 80/125 (64.00%), Query Frame = 1 Query: 217 RSKRSYSRSPSVVKRKGRTNNE-----NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 R K + SRS K ++N+ NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D A A++ NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 103 RRKHAGSRSSYSHDSKKDSHNQGDARANPDPNTCLGVFGLSLYTTERDLREVFSRYGSLAGVNVVYDQRTGRSRGFAFVYFEHIDDAKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 110.538 bits (275), Expect = 3.195e-27 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 244 PSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P +R+ + NP+P C+GVFGLS T ER+LRE F K+G + V ++ D+ S G+ F+ +E+ + + A + NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 105 PMSNRRRHIGDRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFAFVYFENREDSKEAKERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 215
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: rit1 (Ras-like without CAAX 1 [Source:Xenbase;Acc:XB-GENE-5777077]) HSP 1 Score: 120.168 bits (300), Expect = 4.360e-30 Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 134 SPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 245
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: plekhg5 (pleckstrin homology and RhoGEF domain containing G5 [Source:Xenbase;Acc:XB-GENE-6039487]) HSP 1 Score: 115.161 bits (287), Expect = 1.223e-28 Identity = 52/112 (46.43%), Postives = 75/112 (66.96%), Query Frame = 1 Query: 241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 SP +R+ + NP+P CIGVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E ++ + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 95 SPMSNRRRHNGSRANPDPNICIGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIEDSREAMEHANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 206
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 55.8398 bits (133), Expect = 9.856e-9 Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522 V GL+ T E L + F K+G++ V ++ D+ S G+GF+ +E+ + A A+ NG ++DG+ IRVD Sbjct: 22 VGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: cirbp (cold inducible RNA binding protein [Source:NCBI gene;Acc:549982]) HSP 1 Score: 55.8398 bits (133), Expect = 1.037e-8 Identity = 26/71 (36.62%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522 V GL+ T E L + F K+G++ V ++ D+ S G+GF+ +E+ + A A+ NG ++DG+ IRVD Sbjct: 22 VGGLNFETTEESLEQVFSKYGQVAEVVVVKDRESKRSRGFGFVTFENPEDAKDAMMAMNGKSVDGRQIRVD 92
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Match: elavl1 (ELAV like RNA binding protein 1 [Source:NCBI gene;Acc:448062]) HSP 1 Score: 57.7658 bits (138), Expect = 1.164e-8 Identity = 27/70 (38.57%), Postives = 39/70 (55.71%), Query Frame = 1 Query: 319 LSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS 528 L + + ELR F G +++ LI DK SLGYGF+NY + A RAI NG+ + K I+V ++ Sbjct: 27 LPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFA 96
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016]) HSP 1 Score: 123.25 bits (308), Expect = 1.237e-31 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 S+S SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2b (transformer 2 beta [Source:MGI Symbol;Acc:MGI:106016]) HSP 1 Score: 117.087 bits (292), Expect = 1.723e-30 Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 1 Query: 253 VKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 3 TRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 110
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]) HSP 1 Score: 116.701 bits (291), Expect = 2.328e-29 Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 SP +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 209
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Tra2a (transformer 2 alpha [Source:MGI Symbol;Acc:MGI:1933972]) HSP 1 Score: 116.701 bits (291), Expect = 2.430e-29 Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 SP +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 209
BLAST of Transformer-2 beta vs. Ensembl Mouse
Match: Cirbp (cold inducible RNA binding protein [Source:MGI Symbol;Acc:MGI:893588]) HSP 1 Score: 63.5438 bits (153), Expect = 1.938e-11 Identity = 29/71 (40.85%), Postives = 46/71 (64.79%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522 V GLS T+E+ L + F K+G+I V ++ D+ S G+GF+ +E++D A A+ NG ++DG+ IRVD Sbjct: 10 VGGLSFDTNEQALEQVFSKYGQISEVVVVKDRETQRSRGFGFVTFENIDDAKDAMMAMNGKSVDGRQIRVD 80
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|P62997|TRA2B_RAT (Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 S+S SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|P62996|TRA2B_MOUSE (Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 S+S SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|P62995|TRA2B_HUMAN (Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 S+S SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|Q3ZBT6|TRA2B_BOVIN (Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 8.651e-31 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1 Query: 229 SYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 S+S SP +R+ N NP+P C+GVFGLS T ER+LRE F K+G I V+++ D+ S G+ F+ +E++D A A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 95 SHSHSPMSTRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Match: sp|Q6PFR5|TRA2A_MOUSE (Transformer-2 protein homolog alpha OS=Mus musculus OX=10090 GN=Tra2a PE=1 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.664e-28 Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 1 Query: 241 SPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 SP +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+AHTPTPG Y G+ Sbjct: 98 SPMSNRRRHTGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLSGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRAHTPTPGIYMGR 209
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3B3CGK9 (Transformer 2 alpha homolog OS=Oryzias melastigma OX=30732 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 5.930e-31 Identity = 60/123 (48.78%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R KRS + SP +R+ ENP+P +C+GVFGL+ T ER+LRE F ++GR+ + ++ D+ S G+ FI +E L A AI++ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 81 PEHRRKRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEQTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 203
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A437CW16 (RRM domain-containing protein OS=Oryzias javanicus OX=123683 GN=OJAV_G00111960 PE=4 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 1.427e-30 Identity = 59/123 (47.97%), Postives = 83/123 (67.48%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R +RS + SP +R+ ENP+P +C+GVFGL+ T ER+LRE F ++GR+ + ++ D+ S G+ FI +E L A AI++ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 79 PEHRRRRSQNTSPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEQTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3P9K3F4 (Transformer 2 alpha homolog OS=Oryzias latipes OX=8090 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.728e-30 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R +RS + SP +R+ ENP+P +C+GVFGL+ T ER+LRE F ++GR+ + ++ D+ S G+ FI +E L A AI+ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3B3H7T6 (Transformer 2 alpha homolog OS=Oryzias latipes OX=8090 GN=LOC101157868 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.794e-30 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R +RS + SP +R+ ENP+P +C+GVFGL+ T ER+LRE F ++GR+ + ++ D+ S G+ FI +E L A AI+ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201
BLAST of Transformer-2 beta vs. TrEMBL
Match: A0A3P9I3E4 (Transformer 2 alpha homolog OS=Oryzias latipes OX=8090 PE=4 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 2.962e-30 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R +RS + SP +R+ ENP+P +C+GVFGL+ T ER+LRE F ++GR+ + ++ D+ S G+ FI +E L A AI+ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 120.939 bits (302), Expect = 2.381e-31 Identity = 56/123 (45.53%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R +RS S SP +R+ + NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 77 PEYRRRRSQSTSPMSNRRRHAGSRANPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 199
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: ENSAMXT00000034164.1 (pep primary_assembly:Astyanax_mexicanus-2.0:12:6544829:6548035:1 gene:ENSAMXG00000039469.1 transcript:ENSAMXT00000034164.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 112.079 bits (279), Expect = 6.245e-29 Identity = 49/107 (45.79%), Postives = 73/107 (68.22%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 +R+ N NP+P C+GVFGLS T ER+LRE F K+G + +V+++ D+ S G+ F+ +E+ + + A + NGM +DG+ IRVDYSIT++ HTPTPG Y G+ Sbjct: 4 RRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPLSSVSIVYDQQSRRSRGFAFVYFENREDSREAKERANGMELDGRRIRVDYSITQRPHTPTPGIYMGR 110
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 112.849 bits (281), Expect = 1.402e-28 Identity = 48/98 (48.98%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 283 NPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 NP+P +C+GVFGLS T ER+LRE F ++G + V ++ D+ S G+ F+ +E +D + A++ NGM +DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 130 NPDPNTCLGVFGLSLYTTERDLREVFSRYGPLAGVNVVYDQRTGRSRGFAFVYFERIDDSKEAMERANGMELDGRRIRVDYSITKRPHTPTPGIYMGR 227
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: tra2b (transformer-2 protein homolog alpha-like [Source:NCBI gene;Acc:103029311]) HSP 1 Score: 111.694 bits (278), Expect = 1.545e-27 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 244 PSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P +R+ N NP+P C+GVFGLS T ER+LRE F K+G + V ++ D+ S G+ F+ +E+ + + A + NGM +DG+ IRVD+SITK+ HTPTPG Y G+ Sbjct: 100 PMSNRRRHIGNRANPDPTCCLGVFGLSLYTTERDLREVFSKYGPLADVCIVYDQQSRRSRGFAFVYFENREDSQEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGR 210
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:103022315]) HSP 1 Score: 60.4622 bits (145), Expect = 1.285e-9 Identity = 29/71 (40.85%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522 + GL+ T E+ L F KFGRI V L+ D+ ++S G+ F+ YE+ A A +E NG +DGK I+V+ Sbjct: 12 IGGLNTETTEKALESYFSKFGRISEVLLMKDRETNKSRGFAFVTYENPGDAKDAARELNGKALDGKPIKVE 82
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: tra2a (transformer 2 alpha homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1391]) HSP 1 Score: 115.161 bits (287), Expect = 9.061e-30 Identity = 51/117 (43.59%), Postives = 80/117 (68.38%), Query Frame = 1 Query: 226 RSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 R +SRSP +R+ + NP+P C+GVFGLS T E++L+E F ++G +++V ++ D+ S G+ F+ +++ + A A + NGM +DG+ IRVD+SITK+AHTPTPG Y G+ Sbjct: 88 RRHSRSPMSNRRRHLGSRVNPDPSCCLGVFGLSLHTGEKDLKEVFSRYGPVQSVNVVYDQQSGRSRGFAFVYFDNSEDAKEAKERANGMELDGRYIRVDFSITKRAHTPTPGIYMGR 204
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: tra2b (transformer 2 beta homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1094]) HSP 1 Score: 108.997 bits (271), Expect = 2.324e-27 Identity = 49/117 (41.88%), Postives = 78/117 (66.67%), Query Frame = 1 Query: 232 YSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582 ++ SP +R+ + + NPEP +C+GVFGLS T E +LRE F ++G + V ++ D+ G+ F+ ++++ + A + NGM +DG++IRVD+SITK+AHTPTPG Y G+ S Sbjct: 84 FTNSPFSNRRRHQGDRGNPEPNTCLGVFGLSLYTTEHDLREVFGRYGPVADVNVVYDQQSGRPRGFAFVYMQNMEDSKEAKERVNGMELDGRNIRVDFSITKRAHTPTPGIYMGRPS 200
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: srsf2b (serine and arginine rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]) HSP 1 Score: 53.5286 bits (127), Expect = 1.631e-8 Identity = 26/87 (29.89%), Postives = 45/87 (51.72%), Query Frame = 1 Query: 292 PCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTP 552 P + V L+ RT LR +FEK+G + V + D++ ES G+ F+ + D A A+ +G +DG+++RV + + P Sbjct: 6 PSRALQVDNLTYRTSPEMLRRSFEKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDAMDAMDGKMLDGRELRVQVARYSRPADP 92
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860]) HSP 1 Score: 53.9138 bits (128), Expect = 2.923e-8 Identity = 29/84 (34.52%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPG 561 V GL+ T E+ L TF K+GR+ V L+ D+ + S G+ F+ + + + A A ++ NG ++G+ +RVD TK + PG Sbjct: 11 VGGLNIDTTEKALEATFSKYGRVADVLLMKDRETNLSRGFAFVTFANPEDAKEAERDANGKVLEGRAMRVD-QATKPSFESFPG 93
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Match: rbmx (RNA binding motif protein X-linked [Source:NCBI gene;Acc:321860]) HSP 1 Score: 53.1434 bits (126), Expect = 5.876e-8 Identity = 24/71 (33.80%), Postives = 43/71 (60.56%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVD 522 + GLS T+E L F K+GR+ V ++ D+ + S G+ F+ + + D A A ++ NG +DG++I+V+ Sbjct: 11 IGGLSTDTNENALETIFSKYGRVAEVLIMKDRETNRSRGFAFVTFANPDDAKGAERDMNGKPLDGRNIKVE 81
BLAST of Transformer-2 beta vs. Ensembl Yeast
Match: NSR1 (Nucleolar protein that binds nuclear localization sequences; required for pre-rRNA processing and ribosome biogenesis; binds to single stranded telomeric DNA and mRNA; methylated by Hmt1p; interaction with Top1p and nucleolar localization are negatively regulated by polyphosphorylation [Source:SGD;Acc:S000003391]) HSP 1 Score: 54.299 bits (129), Expect = 1.562e-8 Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 1 Query: 262 KGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKA 543 K + N E EP + I V LS D+ L++ FE G + +I ++ S GYG++++E+ A +AI+E G IDG+ I D S +K A Sbjct: 157 KKQKNEETEEPAT-IFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQEMQGKEIDGRPINCDMSTSKPA 249
BLAST of Transformer-2 beta vs. Ensembl Yeast
Match: RIE1 (Putative RNA binding protein; localizes to stress granules induced by glucose deprivation; interacts with Rbg1p in a two-hybrid assay; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003482]) HSP 1 Score: 52.7582 bits (125), Expect = 6.101e-8 Identity = 30/79 (37.97%), Postives = 45/79 (56.96%), Query Frame = 1 Query: 304 IGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKK 540 I V G++K EL F K+G I ++ LI DK + E GYGFI+Y A+ IKE NG ++G + ++Y + +K Sbjct: 197 IFVGGIAKSLSIGELSFLFSKYGPILSMKLIYDKTKGEPNGYGFISYPLGSQASLCIKELNGRTVNGSTLFINYHVERK 275
BLAST of Transformer-2 beta vs. Ensembl Yeast
Match: SNP1 (Component of U1 snRNP required for mRNA splicing via spliceosome; substrate of the arginine methyltransferase Hmt1p; may interact with poly(A) polymerase to regulate polyadenylation; homolog of human U1 70K protein; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001323]) HSP 1 Score: 45.8246 bits (107), Expect = 6.219e-6 Identity = 28/80 (35.00%), Postives = 40/80 (50.00%), Query Frame = 1 Query: 268 RTNNENP---------EPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKE 480 R N NP +P I + L DE EL++ F KFG I+ + ++ DK +S GY FI ++D S+ A KE Sbjct: 88 RLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKE 167
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO44802 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUS7]) HSP 1 Score: 120.939 bits (302), Expect = 2.125e-32 Identity = 57/125 (45.60%), Postives = 81/125 (64.80%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582 P + +R+ S SP +++ + N +NP P C+GVFGLS T ER+LR FEK+G ++ + ++ D S G+GF+ YED A A + G+ +DG+ IRVDYS+TK+AHTPTPG Y GK S Sbjct: 65 PYYKGRRNSSHSPLSNRKRHQGNRDNPSPSRCLGVFGLSLYTTERDLRPVFEKYGPVEAIQIVYDHQTGRSRGFGFVYYEDTKDAEVAKERTTGIELDGRRIRVDYSVTKRAHTPTPGVYMGKAS 189
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO32492 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUY1]) HSP 1 Score: 55.8398 bits (133), Expect = 6.110e-9 Identity = 33/103 (32.04%), Postives = 57/103 (55.34%), Query Frame = 1 Query: 259 RKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567 ++G TNN I V L++ D LR+TFE FG I V ++ D +++S G+GF+++ + A +AI E + + I GK ++ +++ K + PT Y Sbjct: 79 KRGDTNNHFH-----IFVGDLAENVDNALLRKTFEPFGEISEVRVVKDPAKNKSKGFGFVSFVRREDAAKAIAEMDSVTIGGKQVKTNWAARK--NNPTQSKY 174
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO29519 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7T3E7]) HSP 1 Score: 52.373 bits (124), Expect = 3.122e-8 Identity = 25/85 (29.41%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 298 SCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTP 552 S + ++ L + + +L +TF+ FG + + + +DK + S +GF++Y+++ SA AI+ NG I K ++V K A+ P Sbjct: 74 SNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQIGAKRLKVQLKRPKDANRP 158
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO44931 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RUM9]) HSP 1 Score: 49.6766 bits (117), Expect = 5.760e-8 Identity = 23/70 (32.86%), Postives = 42/70 (60.00%), Query Frame = 1 Query: 310 VFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRV 519 V L++ ++ ++E F +GR+KTV L D+ + S G+ ++ Y D + +A+K +G IDG++I V Sbjct: 5 VAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHMDGGQIDGQEIAV 74
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Match: EDO38445 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCR4]) HSP 1 Score: 53.9138 bits (128), Expect = 8.550e-8 Identity = 28/84 (33.33%), Postives = 48/84 (57.14%), Query Frame = 1 Query: 277 NENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYS 528 ++NP P S + V LS T L FE K +I D+ ES G+GF++Y+D+++A + + E G +DG+ +R+D++ Sbjct: 471 DQNP-PNSSLIVRNLSYDTTTDSLGAAFEGCSNAK---VIFDRESGESRGFGFVDYDDVETAKKVLSEMAGAEVDGRQVRLDFA 550
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2a (transformer-2 protein homolog alpha [Source:NCBI gene;Acc:101157868]) HSP 1 Score: 127.872 bits (320), Expect = 1.052e-33 Identity = 59/123 (47.97%), Postives = 82/123 (66.67%), Query Frame = 1 Query: 208 PPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P R +RS + SP +R+ ENP+P +C+GVFGL+ T ER+LRE F ++GR+ + ++ D+ S G+ FI +E L A AI+ NGMN+DG+ IRVDYSITK+ HTPTPG Y G+ Sbjct: 79 PDHRRRRSQNASPMSSRRRHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIYFERLCDAREAIEHTNGMNMDGRQIRVDYSITKRPHTPTPGIYMGR 201
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2a (transformer 2a [Source:NCBI gene;Acc:100049284]) HSP 1 Score: 114.39 bits (285), Expect = 1.205e-28 Identity = 51/111 (45.95%), Postives = 74/111 (66.67%), Query Frame = 1 Query: 244 PSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGK 576 P +R+ N NP+P C+GVFGLS T ER+LRE F K+G + V ++ D+ S G+ F+ +E+ + + A ++ NGM +DG+ IRVD+SITK+AHTPTPG Y G+ Sbjct: 97 PMSNRRRHIGNRGNPDPSCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGMELDGRRIRVDFSITKRAHTPTPGIYMGR 207
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 107.842 bits (268), Expect = 2.858e-26 Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567 +R+ N NP+P +C+GVFGLS T ER+L++ F K+G + V+++ D+ S G+ F+ +E+ A A ++ NGM +DG+ IRVD+SITK+ HTPTPG Y Sbjct: 108 RRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 211
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 107.842 bits (268), Expect = 4.446e-26 Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567 +R+ N NP+P +C+GVFGLS T ER+L++ F K+G + V+++ D+ S G+ F+ +E+ A A ++ NGM +DG+ IRVD+SITK+ HTPTPG Y Sbjct: 117 RRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 220
BLAST of Transformer-2 beta vs. Ensembl Medaka
Match: tra2b (transformer 2 beta homolog [Source:NCBI gene;Acc:100049285]) HSP 1 Score: 107.457 bits (267), Expect = 5.080e-26 Identity = 47/104 (45.19%), Postives = 71/104 (68.27%), Query Frame = 1 Query: 256 KRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTY 567 +R+ N NP+P +C+GVFGLS T ER+L++ F K+G + V+++ D+ S G+ F+ +E+ A A ++ NGM +DG+ IRVD+SITK+ HTPTPG Y Sbjct: 103 RRRHIGNRANPDPNACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAKEKANGMELDGRRIRVDFSITKRPHTPTPGIY 206
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000052833.1 (SMESG000052833.1) HSP 1 Score: 276.174 bits (705), Expect = 3.624e-91 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1 Query: 79 MSNWKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINDKYPPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582 MSNWKNSSVESGSNRSNSSNRSFKNFHSRSRSQSRSASINDKYPPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS Sbjct: 1 MSNWKNSSVESGSNRSNSSNRSFKNFHSRSRSQSRSASINDKYPPQRSKRSYSRSPSVVKRKGRTNNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 168
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000052829.1 (SMESG000052829.1) HSP 1 Score: 170.629 bits (431), Expect = 5.364e-50 Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 1 Query: 286 PEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582 PEPC CIGVFGL+KRT+E+ L ETFEKFGRI +V LIMDKY ESLGYGFINYEDL SATRA+KE +GMN+DGK IRVDYSITKKAHTPTPG Y GK S Sbjct: 73 PEPCKCIGVFGLNKRTEEKILWETFEKFGRIASVKLIMDKYHQESLGYGFINYEDLGSATRAVKEASGMNLDGKVIRVDYSITKKAHTPTPGYYMGKVS 171
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000052838.1 (SMESG000052838.1) HSP 1 Score: 147.132 bits (370), Expect = 7.827e-40 Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 1 Query: 274 NNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGT-YKGK 576 NN P+P +CIG+FGLSK+T ER L +TF FG+IK+V+LI+DK+ ESLG+ FINYE+LDSAT AIKE NGM +D K +RVDYSITKKA+TPTPG+ YKGK Sbjct: 52 NNTTPDPSTCIGIFGLSKKTSERTLWKTFGNFGKIKSVSLIVDKFTKESLGFAFINYEELDSATNAIKETNGMTLDSKVVRVDYSITKKAYTPTPGSGYKGK 153
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1) HSP 1 Score: 125.561 bits (314), Expect = 2.025e-33 Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 274 NNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582 + +NP+P +CIGVFGLS +TDE++L F+K+G IK V L++D Y S G+GFI YE+++SA A +G+ IDG+ +R+DYSIT+KAHTPTPG Y GK S Sbjct: 79 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 181
BLAST of Transformer-2 beta vs. Planmine SMEST
Match: SMESG000031644.1 (SMESG000031644.1) HSP 1 Score: 125.561 bits (314), Expect = 2.165e-33 Identity = 56/103 (54.37%), Postives = 77/103 (74.76%), Query Frame = 1 Query: 274 NNENPEPCSCIGVFGLSKRTDERELRETFEKFGRIKTVTLIMDKYQHESLGYGFINYEDLDSATRAIKEGNGMNIDGKDIRVDYSITKKAHTPTPGTYKGKTS 582 + +NP+P +CIGVFGLS +TDE++L F+K+G IK V L++D Y S G+GFI YE+++SA A +G+ IDG+ +R+DYSIT+KAHTPTPG Y GK S Sbjct: 80 DRDNPKPSTCIGVFGLSLKTDEKDLYRVFQKYGEIKDVQLVLDNYTGRSRGFGFIYYEEVESARNAKDSAHGIEIDGRVVRIDYSITRKAHTPTPGVYLGKKS 182 The following BLAST results are available for this feature:
BLAST of Transformer-2 beta vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Transformer-2 beta vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Transformer-2 beta vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 3
BLAST of Transformer-2 beta vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Transformer-2 beta vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Transformer-2 beta vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024961 ID=SMED30024961|Name=Transformer-2 beta|organism=Schmidtea mediterranea sexual|type=transcript|length=1281bpback to top protein sequence of SMED30024961-orf-1 >SMED30024961-orf-1 ID=SMED30024961-orf-1|Name=SMED30024961-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=252bp MSNWKNSSVESGSNRSNSSNRSFKNFHSRSRSQSRSASINDKYPPQRSKRback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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