Spliceosome RNA helicase DDX39B
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024887 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 29
Homology
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Human
Match: DDX39A (DExD-box helicase 39A [Source:HGNC Symbol;Acc:HGNC:17821]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 293/400 (73.25%), Postives = 351/400 (87.75%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK +K SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQIE VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK D E +KK+CP ++V TPGR+L L++ ++ S+ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSK+IRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQVIIFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 26 TPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Human
Match: DDX39B (DExD-box helicase 39B [Source:HGNC Symbol;Acc:HGNC:13917]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 296/401 (73.82%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 103 GSEA--KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
G+EA KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 26 GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Human
Match: DDX39B (DExD-box helicase 39B [Source:HGNC Symbol;Acc:HGNC:13917]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 296/401 (73.82%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 103 GSEA--KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
G+EA KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 26 GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Human
Match: DDX39B (DExD-box helicase 39B [Source:HGNC Symbol;Acc:HGNC:13917]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 296/401 (73.82%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 103 GSEA--KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
G+EA KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 26 GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Human
Match: DDX39B (DExD-box helicase 39B [Source:HGNC Symbol;Acc:HGNC:13917]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 296/401 (73.82%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 103 GSEA--KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
G+EA KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 26 GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Celegans
Match: hel-1 (Spliceosome RNA helicase DDX39B homolog [Source:UniProtKB/Swiss-Prot;Acc:Q18212]) HSP 1 Score: 601.282 bits (1549), Expect = 0.000e+0 Identity = 274/402 (68.16%), Postives = 343/402 (85.32%), Query Frame = 1
Query: 97 ITGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
+ G +A+KT K +Y S+HSSGFRDFLLKPE+LRAI DCGFEHPS+VQHECIPQAIL MDV+CQAKSGMGKTAVFV+ TLQQ+E + V+ +CHTRELAFQISKEYERFSKY+P +KV+VF+GG+ IK D E + CP I+V TPGR+L L + L +D +K+F++DECDK++ MR DVQ+I ++TP+ KQVMMFSATL KE+R VCK+FM DP+E+++D+++KLTLHGL+QHY+KL E EKN++L++LLD+L FNQV+IFVK+V+RC AL LL EQNFPSIAIHR + QEER++RYQ+FK+F+KRILVAT+LFGRG+DIERVNIVFNYDMPEDSD+YLHRVARAGRFGTKGLAITFVSDE DAKTLN VQ+RF +SIT++P +++ Y+E R
Sbjct: 23 VGGGDARKT-KGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSATLPKELRTVCKRFMQDPMEVYVDDEAKLTLHGLQQHYVKLKEAEKNRRLLNLLDALEFNQVVIFVKAVKRCEALHQLLTEQNFPSIAIHRQMAQEERLSRYQAFKDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLHRVARAGRFGTKGLAITFVSDENDAKTLNSVQDRFDISITELPEKIDVSTYIEGR 423
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Celegans
Match: inf-1 (Eukaryotic initiation factor 4A [Source:UniProtKB/Swiss-Prot;Acc:P27639]) HSP 1 Score: 248.825 bits (634), Expect = 2.770e-77 Identity = 133/370 (35.95%), Postives = 215/370 (58.11%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F D LK ELLR I GFE PS +Q I DV+ QA+SG GKTA F ++ LQ+I+ ++ + LV+ TRELA QI K +Y+ ++ + GG ++ D ++ ++V TPGR+ D+I + AL IK F++DE D++L S + + ++FR P+ QV++ SAT+ E+ V +FM +P+ I + D +LTL G++Q YI + + E K L DL + + Q +IF + ++ L + E F +H + Q ER + F++ R+L+ T++ RGID+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV+ E DA+ L E++ + I ++P
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVT-ENDARQLKEIESYYTTQIEEMP 395
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Celegans
Match: inf-1 (Eukaryotic initiation factor 4A [Source:UniProtKB/Swiss-Prot;Acc:P27639]) HSP 1 Score: 248.825 bits (634), Expect = 2.770e-77 Identity = 133/370 (35.95%), Postives = 215/370 (58.11%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F D LK ELLR I GFE PS +Q I DV+ QA+SG GKTA F ++ LQ+I+ ++ + LV+ TRELA QI K +Y+ ++ + GG ++ D ++ ++V TPGR+ D+I + AL IK F++DE D++L S + + ++FR P+ QV++ SAT+ E+ V +FM +P+ I + D +LTL G++Q YI + + E K L DL + + Q +IF + ++ L + E F +H + Q ER + F++ R+L+ T++ RGID+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV+ E DA+ L E++ + I ++P
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVT-ENDARQLKEIESYYTTQIEEMP 395
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Celegans
Match: inf-1 (Eukaryotic initiation factor 4A [Source:UniProtKB/Swiss-Prot;Acc:P27639]) HSP 1 Score: 248.825 bits (634), Expect = 2.770e-77 Identity = 133/370 (35.95%), Postives = 215/370 (58.11%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F D LK ELLR I GFE PS +Q I DV+ QA+SG GKTA F ++ LQ+I+ ++ + LV+ TRELA QI K +Y+ ++ + GG ++ D ++ ++V TPGR+ D+I + AL IK F++DE D++L S + + ++FR P+ QV++ SAT+ E+ V +FM +P+ I + D +LTL G++Q YI + + E K L DL + + Q +IF + ++ L + E F +H + Q ER + F++ R+L+ T++ RGID+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV+ E DA+ L E++ + I ++P
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYL-NVNILPCIGGTSVRDDQRKLEAGI-HVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEML-SRGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDVTNRFMRNPIRILVKKD-ELTLEGIRQFYINVQKDEWKFDCLCDLYNVVNVTQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVT-ENDARQLKEIESYYTTQIEEMP 395
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Celegans
Match: Y65B4A.6 (pep chromosome:WBcel235:I:629492:636350:-1 gene:WBGene00022029.1 transcript:Y65B4A.6a.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Y65B4A.6) HSP 1 Score: 247.669 bits (631), Expect = 7.071e-77 Identity = 130/370 (35.14%), Postives = 216/370 (58.38%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F L+ +LLR I GFE PS +Q IP + DV+ QA+SG GKTA F ++ LQ ++ ++ L+L TRELA QI K YM +++ GG + DI + ++ TPGR+ D+I+++ L IK ++DE D++L+ + + I+R P QV++ SATL EI + KFMTDP+ I + D +LTL G+KQ ++ + +E K LIDL D+LT Q ++F + ++ L + + E NF ++H + Q++R + F+ R+L++T+++ RG+D+ +V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV + D + L ++++ + I ++P
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYM-NVQCHACIGGTNLGEDIRKLDYG-QHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNK-GFKEQLYDIYRYLPPGAQVVLLSATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVDREEWKFDTLIDLYDTLTITQAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWARGLDVPQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKQD-DVRILRDIEQYYSTQIDEMP 392
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Fly
Match: Hel25E (gene:FBgn0014189 transcript:FBtr0079125) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 289/397 (72.80%), Postives = 348/397 (87.66%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIE-ADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
KK VK +YVS+HSSGFRDFLLKPE+LRAI+DCGFEHPS+VQHECIPQA+L MD+LCQAKSGMGKTAVFVLATLQQ+E +D N VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ I+ D E++K P I+V TPGR+L LI+ K L++ +KHF++DECDK+L+ + MR DVQ+IFR TP KQVMMFSATLSK+IRPVCKKFM DP+E+++D+++KLTLHGL+QHY+ L E EKNK+L +LLD L FNQV+IFVKSVQRC+AL LL EQNFP+I IHR +TQEER+ RYQ FK+F+KRILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LNEVQ+RF V+I+++P +++ Y+E R
Sbjct: 28 KKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYIEGR 424
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Fly
Match: Hel25E (gene:FBgn0014189 transcript:FBtr0079123) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 289/397 (72.80%), Postives = 348/397 (87.66%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIE-ADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
KK VK +YVS+HSSGFRDFLLKPE+LRAI+DCGFEHPS+VQHECIPQA+L MD+LCQAKSGMGKTAVFVLATLQQ+E +D N VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ I+ D E++K P I+V TPGR+L LI+ K L++ +KHF++DECDK+L+ + MR DVQ+IFR TP KQVMMFSATLSK+IRPVCKKFM DP+E+++D+++KLTLHGL+QHY+ L E EKNK+L +LLD L FNQV+IFVKSVQRC+AL LL EQNFP+I IHR +TQEER+ RYQ FK+F+KRILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LNEVQ+RF V+I+++P +++ Y+E R
Sbjct: 28 KKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYIEGR 424
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Fly
Match: Hel25E (gene:FBgn0014189 transcript:FBtr0079124) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 289/397 (72.80%), Postives = 348/397 (87.66%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIE-ADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
KK VK +YVS+HSSGFRDFLLKPE+LRAI+DCGFEHPS+VQHECIPQA+L MD+LCQAKSGMGKTAVFVLATLQQ+E +D N VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ I+ D E++K P I+V TPGR+L LI+ K L++ +KHF++DECDK+L+ + MR DVQ+IFR TP KQVMMFSATLSK+IRPVCKKFM DP+E+++D+++KLTLHGL+QHY+ L E EKNK+L +LLD L FNQV+IFVKSVQRC+AL LL EQNFP+I IHR +TQEER+ RYQ FK+F+KRILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LNEVQ+RF V+I+++P +++ Y+E R
Sbjct: 28 KKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDPMEVYVDDEAKLTLHGLQQHYVNLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVALSQLLTEQNFPAIGIHRGMTQEERLNRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNEVQDRFDVNISELPEEIDLSTYIEGR 424
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Fly
Match: Hel25E (gene:FBgn0014189 transcript:FBtr0331676) HSP 1 Score: 329.331 bits (843), Expect = 1.042e-109 Identity = 158/222 (71.17%), Postives = 191/222 (86.04%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIE-ADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTD-PLEIFI 774
KK VK +YVS+HSSGFRDFLLKPE+LRAI+DCGFEHPS+VQHECIPQA+L MD+LCQAKSGMGKTAVFVLATLQQ+E +D N VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ I+ D E++K P I+V TPGR+L LI+ K L++ +KHF++DECDK+L+ + MR DVQ+IFR TP KQVMMFSATLSK+IRPVCKKFM D + +FI
Sbjct: 28 KKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSATLSKDIRPVCKKFMQDVNINVFI 249
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Fly
Match: CG7483 (gene:FBgn0037573 transcript:FBtr0081834) HSP 1 Score: 246.899 bits (629), Expect = 1.664e-76 Identity = 135/370 (36.49%), Postives = 214/370 (57.84%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F LK ELLR I GFE PS +Q I + DV+ QA+SG GKTA F ++ LQ ++ ++VL L TRELA QI K M +++ V GG + DI + I+ TPGR+ D+IK++ L IK ++DE D++L+ + + ++R P QV++ SATL EI + KFMTDP+ I + D +LTL G+KQ ++ + +E K L DL D+LT Q +IF + ++ L + E NF ++H + Q+ER + F+ + R+L+ T+++ RGID+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV + D + L ++++ + I ++P
Sbjct: 28 FNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMM-NVQCHVCIGGTNLGEDIRKLDYG-QHIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIRILRDIEQYYSTQIDEMP 392
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Zebrafish
Match: ddx39ab (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 291/396 (73.48%), Postives = 348/396 (87.88%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D + +KKSCP I+V TPGR+L L++ K L++ N+KHF++DECDK+L+ + MR DVQ IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 30 GKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Zebrafish
Match: ddx39ab (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]) HSP 1 Score: 629.787 bits (1623), Expect = 0.000e+0 Identity = 291/395 (73.67%), Postives = 346/395 (87.59%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYME 1296
KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D + +KKSCP I+V TPGR+L L++ K L++ N+KHF++DECDK+L+ + MR DVQ IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V++ ++P +I+ Y E
Sbjct: 30 GKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMSIKKDEDVLKKSCPHIVVGTPGRILALVRNKTLNLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYSE 424
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Zebrafish
Match: ddx39b (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]) HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0 Identity = 291/395 (73.67%), Postives = 351/395 (88.86%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
K+ VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMPS+KV+VF+GG+ IK D E +KK P ++V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR++ Q+ER+ARYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DA+TLN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 39 KEGVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVNISELPEEIDISSYIEQ 433
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Zebrafish
Match: ddx39b (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:ZFIN;Acc:ZDB-GENE-040426-1259]) HSP 1 Score: 629.017 bits (1621), Expect = 0.000e+0 Identity = 291/395 (73.67%), Postives = 351/395 (88.86%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
K+ VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMPS+KV+VF+GG+ IK D E +KK P ++V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR++ Q+ER+ARYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DA+TLN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 39 KEGVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQDERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVNISELPEEIDISSYIEQ 433
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Zebrafish
Match: ddx39aa (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]) HSP 1 Score: 624.009 bits (1608), Expect = 0.000e+0 Identity = 288/399 (72.18%), Postives = 347/399 (86.97%), Query Frame = 1
Query: 103 GSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
+ KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYM S+K +VF+GG+ IK D + +KK+CP I+V TPGR+L L + K L++ N+KHF++DECDK+L+ + MR DVQ IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSV RC+AL LL EQNFP+IAIHR +TQEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 27 ATTGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMSSVKCAVFFGGMSIKKDEDVLKKNCPHIVVGTPGRILALSRNKTLTLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMTQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Xenopus
Match: ddx39a (DEAD-box helicase 39A [Source:NCBI gene;Acc:548754]) HSP 1 Score: 638.262 bits (1645), Expect = 0.000e+0 Identity = 292/396 (73.74%), Postives = 354/396 (89.39%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
A+K VK SYVS+HSSGFRDFLLKPELLR+I+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ EA E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D ++I+KSCP I+V TPGR+L L++ K L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR+++QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 30 ARKEVKGSYVSIHSSGFRDFLLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQTEAVEGQVTVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPHIVVGTPGRILALVRSKILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIAIHRNMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAKILNDVQDRFEVNVGELPDEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Xenopus
Match: ddx39a (DEAD-box helicase 39A [Source:NCBI gene;Acc:548754]) HSP 1 Score: 637.106 bits (1642), Expect = 0.000e+0 Identity = 292/396 (73.74%), Postives = 354/396 (89.39%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
A+K VK SYVS+HSSGFRDFLLKPELLR+I+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ EA E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D ++I+KSCP I+V TPGR+L L++ K L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR+++QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 52 ARKEVKGSYVSIHSSGFRDFLLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQTEAVEGQVTVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPHIVVGTPGRILALVRSKILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIAIHRNMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAKILNDVQDRFEVNVGELPDEIDISTYIEQ 447
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Xenopus
Match: ddx39a (DEAD-box helicase 39A [Source:NCBI gene;Acc:548754]) HSP 1 Score: 636.721 bits (1641), Expect = 0.000e+0 Identity = 292/395 (73.92%), Postives = 352/395 (89.11%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYME 1296
A+K VK SYVS+HSSGFRDFLLKPELLR+I+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ EA E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D ++I+KSCP I+V TPGR+L L++ K L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR+++QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V++ ++P +I+ Y E
Sbjct: 35 ARKEVKGSYVSIHSSGFRDFLLKPELLRSIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQTEAVEGQVTVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEDTIRKSCPHIVVGTPGRILALVRSKILNLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIAIHRNMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEEDAKILNDVQDRFEVNVGELPDEIDISTYSE 429
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Xenopus
Match: enosf1 (enolase superfamily member 1 [Source:Xenbase;Acc:XB-GENE-940740]) HSP 1 Score: 619.772 bits (1597), Expect = 0.000e+0 Identity = 294/395 (74.43%), Postives = 351/395 (88.86%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
KK +K SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMPS+KV+VF+GG+ IK D E +KKSCP I+V TPGR+L L + K L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR ++QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LNEVQ+RF V+I+++P +I++Y+E+
Sbjct: 32 KKEMKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAIKKDEEVLKKSCPHIVVGTPGRMLALARNKTLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Xenopus
Match: enosf1 (enolase superfamily member 1 [Source:Xenbase;Acc:XB-GENE-940740]) HSP 1 Score: 618.616 bits (1594), Expect = 0.000e+0 Identity = 294/394 (74.62%), Postives = 349/394 (88.58%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYME 1296
KK +K SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMPS+KV+VF+GG+ IK D E +KKSCP I+V TPGR+L L + K L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR ++QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LNEVQ+RF V+I+++P +I++Y E
Sbjct: 32 KKEMKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAIKKDEEVLKKSCPHIVVGTPGRMLALARNKTLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFEVNISELPDEIDISSYSE 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Mouse
Match: Ddx39 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:MGI Symbol;Acc:MGI:1915528]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 292/400 (73.00%), Postives = 352/400 (88.00%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQIE VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK D + +KK+CP ++V TPGR+L L++ ++L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 26 TPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Mouse
Match: Ddx39 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:MGI Symbol;Acc:MGI:1915528]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 292/400 (73.00%), Postives = 352/400 (88.00%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQIE VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK D + +KK+CP ++V TPGR+L L++ ++L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 26 TPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Mouse
Match: Ddx39 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:MGI Symbol;Acc:MGI:1915528]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 292/400 (73.00%), Postives = 352/400 (88.00%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQIE VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK D + +KK+CP ++V TPGR+L L++ ++L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 26 TPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Mouse
Match: Ddx39 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Source:MGI Symbol;Acc:MGI:1915528]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 292/400 (73.00%), Postives = 352/400 (88.00%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQIE VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK D + +KK+CP ++V TPGR+L L++ ++L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 26 TPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Mouse
Match: Ddx39b (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B [Source:MGI Symbol;Acc:MGI:99240]) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 295/400 (73.75%), Postives = 354/400 (88.50%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + AKK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 27 TEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. UniProt/SwissProt
Match: sp|Q63413|DX39B_RAT (Spliceosome RNA helicase Ddx39b OS=Rattus norvegicus OX=10116 GN=Ddx39b PE=2 SV=3) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 295/400 (73.75%), Postives = 354/400 (88.50%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + AKK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 27 TEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. UniProt/SwissProt
Match: sp|Q9Z1N5|DX39B_MOUSE (Spliceosome RNA helicase Ddx39b OS=Mus musculus OX=10090 GN=Ddx39b PE=1 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 295/400 (73.75%), Postives = 354/400 (88.50%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + AKK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 27 TEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. UniProt/SwissProt
Match: sp|Q5ZHZ0|DX39B_CHICK (Spliceosome RNA helicase DDX39B OS=Gallus gallus OX=9031 GN=DDX39B PE=2 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 297/401 (74.06%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 103 GSEA--KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
GSEA KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMPS+KV+VF+GG+ +K D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 26 GSEAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. UniProt/SwissProt
Match: sp|Q3T147|DX39B_BOVIN (Spliceosome RNA helicase DDX39B OS=Bos taurus OX=9913 GN=DDX39B PE=2 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 297/401 (74.06%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 103 GSEA--KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
G+EA KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMPS+KV+VF+GG+ IK D E +KK+CP I+V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAK LN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 26 GAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISSYIEQ 426
BLAST of Spliceosome RNA helicase DDX39B vs. UniProt/SwissProt
Match: sp|Q5U216|DX39A_RAT (ATP-dependent RNA helicase DDX39A OS=Rattus norvegicus OX=10116 GN=Ddx39a PE=2 SV=1) HSP 1 Score: 635.565 bits (1638), Expect = 0.000e+0 Identity = 292/400 (73.00%), Postives = 352/400 (88.00%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQIE VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK D + +KK+CP ++V TPGR+L L++ ++L++ N+KHF++DECDK+L+ + MR DVQ+IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 26 TPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. TrEMBL
Match: A4V6M7 (WM6 protein OS=Dugesia japonica OX=6161 PE=2 SV=1) HSP 1 Score: 679.093 bits (1751), Expect = 0.000e+0 Identity = 315/397 (79.35%), Postives = 366/397 (92.19%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEA-DENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
+K +K+ VSMH SGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVL+TLQQ++A D+ +VLVLCHTRELAFQISKEYERFSKYM ++ VSVFYGGVPI+ DIE +KKS PQ+IVATPGRLLDL++QKAL++ ++KHFI+DECDK+LD+VSMRGDVQ++F+LTP KQVMMFSATLSKEIRP+CKKFM DPLEIFID+DSKLTLHGLKQHY+K+ E EKN++L +LLD L FNQVI+FVKSVQRC+ALCNLLCEQNFP+IAIHR +TQE+RI+RYQ+FKNF+KR+LVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF+SDE DAK LN+VQ RF V+I+++P + EIT YMEER
Sbjct: 7 QKGLKEVTVSMHRSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLSTLQQLDATDDGTCKVLVLCHTRELAFQISKEYERFSKYMSNINVSVFYGGVPIRNDIEKLKKSVPQLIVATPGRLLDLVRQKALNLKSVKHFILDECDKMLDNVSMRGDVQEVFKLTPHQKQVMMFSATLSKEIRPICKKFMQDPLEIFIDDDSKLTLHGLKQHYLKVKENEKNRKLFELLDELQFNQVIVFVKSVQRCIALCNLLCEQNFPAIAIHRQMTQEDRISRYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDENDAKILNDVQNRFEVNISELPDVVEITTYMEER 403
BLAST of Spliceosome RNA helicase DDX39B vs. TrEMBL
Match: A0A158QSP7 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS1180 PE=4 SV=1) HSP 1 Score: 660.988 bits (1704), Expect = 0.000e+0 Identity = 301/399 (75.44%), Postives = 360/399 (90.23%), Query Frame = 1
Query: 109 EAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADE-NLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
+AKKTVK YV++HSSGFRDF+LKPE+LRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFV+ATLQQ++ +E ++RV+VLCHTRELAFQISKEYERFSKYMP +KV VF+GG+P++ DIES+ K P I+V TPGR+LDLI+ KAL++DNIKHFIIDECDK+LD++ MR DVQ IFR+TPR KQVMMFSAT+SKEIRPVC+ FM DPLE+FIDNDSKLTLHGL+QHY+K+ E EKN++L +LLD L FNQVIIFVKSVQRC+AL LL +QNFP+IA+HR+++QEER+ RYQ+FKNF KR+LVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF+SDE DA LN+VQ RF V+I+++P + E+ +YME+R
Sbjct: 28 QAKKTVKGDYVTVHSSGFRDFILKPEVLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEEEGVTRVIVLCHTRELAFQISKEYERFSKYMPKIKVGVFFGGMPLRKDIESLAKCSPHIVVGTPGRILDLIRNKALNLDNIKHFIIDECDKMLDTLDMRRDVQDIFRMTPRSKQVMMFSATMSKEIRPVCRNFMQDPLEVFIDNDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCIALAQLLVDQNFPAIAMHRAVSQEERLKRYQAFKNFHKRLLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEQDANILNDVQNRFEVNISELPDVMEVASYMEDR 426
BLAST of Spliceosome RNA helicase DDX39B vs. TrEMBL
Match: E3TFR0 (Spliceosome RNA helicase bat1 OS=Ictalurus punctatus OX=7998 GN=UAP56 PE=2 SV=1) HSP 1 Score: 660.218 bits (1702), Expect = 0.000e+0 Identity = 302/399 (75.69%), Postives = 358/399 (89.72%), Query Frame = 1
Query: 109 EAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADE-NLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
+ KK VK YV++HSSGFRDF+LKPE+LRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFV+ATLQQ++ +E ++RVLVLCHTRELA+QISKEYERFSKYMP +KV VF+GG+P++ DIES K P I+V TPGR+LDLI+ KAL +DNIKHFIIDECDK+LD++ MR DVQ IFR TPR KQVMMFSAT+SK+IRPVC+ FM DPLEIFIDNDSKLTLHGL+QHY+K+ E EKN++L +LLD L FNQVIIFVKSVQRC+ALC LL +QNFP+IA+HRS++QEER+ RYQ+FKNF+KR+LVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF+SDE DA+ LN+VQ RF V+I+++P + EI +YME+R
Sbjct: 28 QVKKAVKGDYVTVHSSGFRDFILKPEVLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVIATLQQLDPEEEGMTRVLVLCHTRELAYQISKEYERFSKYMPKIKVGVFFGGMPLRRDIESFGKGAPHIVVGTPGRILDLIRNKALKLDNIKHFIIDECDKMLDTLDMRRDVQDIFRQTPRSKQVMMFSATMSKDIRPVCRNFMQDPLEIFIDNDSKLTLHGLRQHYVKVKENEKNRKLFELLDELQFNQVIIFVKSVQRCIALCQLLVDQNFPAIAMHRSMSQEERLERYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDEHDAEILNDVQNRFEVNISELPDVMEIASYMEDR 426
BLAST of Spliceosome RNA helicase DDX39B vs. TrEMBL
Match: A0A1I8G5T6 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0 Identity = 308/401 (76.81%), Postives = 359/401 (89.53%), Query Frame = 1
Query: 106 SEAKKTV-KDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEA-DENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
SE KK K SYV++HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E+ DE RVLVLCHTRELAFQISKEYERFSKYMP + +SV++GGVP+K DIE++KKS P I+V TPGR+LDL++ KALS+ ++KHF++DECDK+LD + MR DVQ+IF++TP KQVMMFSATLSKEIRP+CKKFM DPLEI+ID++SKLTLHGLKQHY+K+ E EKN++L +L+D L FNQVIIFVKSVQRCMAL LL EQNFP+IAIHR +TQEER+ +YQSFKNFEKRI+VATNLFGRG+DIERVNIVFNYDMPE+SDTYLHRVARAGRFGTKGLAITFVSDEAD K LN+VQ RF V+IT++P EI++Y+E R
Sbjct: 33 SEGKKAGHKGSYVTIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQLESVDEAEPRVLVLCHTRELAFQISKEYERFSKYMPGVNISVYFGGVPVKKDIEALKKSMPHIVVGTPGRVLDLVRNKALSLKSVKHFVLDECDKMLDQLDMRRDVQEIFKMTPHQKQVMMFSATLSKEIRPICKKFMQDPLEIYIDDESKLTLHGLKQHYLKVKENEKNRKLFELIDVLEFNQVIIFVKSVQRCMALSQLLVEQNFPAIAIHRGMTQEERLEKYQSFKNFEKRIMVATNLFGRGMDIERVNIVFNYDMPENSDTYLHRVARAGRFGTKGLAITFVSDEADVKILNDVQNRFEVNITELPEEIEISSYIEGR 433
BLAST of Spliceosome RNA helicase DDX39B vs. TrEMBL
Match: A0A1I8G6U9 (Uncharacterized protein OS=Macrostomum lignano OX=282301 PE=4 SV=1) HSP 1 Score: 659.062 bits (1699), Expect = 0.000e+0 Identity = 308/401 (76.81%), Postives = 359/401 (89.53%), Query Frame = 1
Query: 106 SEAKKTV-KDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEA-DENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
SE KK K SYV++HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E+ DE RVLVLCHTRELAFQISKEYERFSKYMP + +SV++GGVP+K DIE++KKS P I+V TPGR+LDL++ KALS+ ++KHF++DECDK+LD + MR DVQ+IF++TP KQVMMFSATLSKEIRP+CKKFM DPLEI+ID++SKLTLHGLKQHY+K+ E EKN++L +L+D L FNQVIIFVKSVQRCMAL LL EQNFP+IAIHR +TQEER+ +YQSFKNFEKRI+VATNLFGRG+DIERVNIVFNYDMPE+SDTYLHRVARAGRFGTKGLAITFVSDEAD K LN+VQ RF V+IT++P EI++Y+E R
Sbjct: 33 SEGKKAGHKGSYVTIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILSMDVLCQAKSGMGKTAVFVLATLQQLESVDEAEPRVLVLCHTRELAFQISKEYERFSKYMPGVNISVYFGGVPVKKDIEALKKSMPHIVVGTPGRVLDLVRNKALSLKSVKHFVLDECDKMLDQLDMRRDVQEIFKMTPHQKQVMMFSATLSKEIRPICKKFMQDPLEIYIDDESKLTLHGLKQHYLKVKENEKNRKLFELIDVLEFNQVIIFVKSVQRCMALSQLLVEQNFPAIAIHRGMTQEERLEKYQSFKNFEKRIMVATNLFGRGMDIERVNIVFNYDMPENSDTYLHRVARAGRFGTKGLAITFVSDEADVKILNDVQNRFEVNITELPEEIEISSYIEGR 433
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Cavefish
Match: ddx39aa (DExD-box helicase 39A [Source:NCBI gene;Acc:103041171]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 294/395 (74.43%), Postives = 350/395 (88.61%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ+E + VLV+CHTRELAFQISKEYERFSKYMP++K SVF+GG+PIK + E +KKSCP I+V TPGR+L LI+ K L++ NIKHFI+DECDK+L+ + MR DVQ IFRLTP KQVMMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSV RC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAKTLN+VQ+RF V++ ++P +I++Y+E+
Sbjct: 31 KKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKCSVFFGGLPIKNNEEVLKKSCPHIVVGTPGRILALIRSKTLNLKNIKHFILDECDKMLEQLDMRRDVQDIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPDEIDISSYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Cavefish
Match: ddx39ab (ATP-dependent RNA helicase DDX39A [Source:NCBI gene;Acc:103028657]) HSP 1 Score: 633.639 bits (1633), Expect = 0.000e+0 Identity = 292/396 (73.74%), Postives = 348/396 (87.88%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYMP++K +VF+GG+ IK D E +KK+CP I+V TPGR+L LI+ K LS+ N+KHF++DECDK+L+ + MR DVQ IFRLTP KQ MMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAKTLN+VQ+RF V++ ++P +I+ Y+E+
Sbjct: 30 GKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKAAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALIRSKTLSLKNVKHFVLDECDKMLEQLDMRRDVQDIFRLTPHEKQCMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDISTYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Cavefish
Match: ddx39aa (DExD-box helicase 39A [Source:NCBI gene;Acc:103041171]) HSP 1 Score: 630.943 bits (1626), Expect = 0.000e+0 Identity = 297/411 (72.26%), Postives = 356/411 (86.62%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER*IWPRY--YSGIYII 1341
KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQ+E + VLV+CHTRELAFQISKEYERFSKYMP++K SVF+GG+PIK + E +KKSCP I+V TPGR+L LI+ K L++ NIKHFI+DECDK+L+ + MR DVQ IFRLTP KQVMMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSV RC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAKTLN+VQ+RF V++ ++P +I++Y + I+ Y Y+ Y++
Sbjct: 95 KKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKCSVFFGGLPIKNNEEVLKKSCPHIVVGTPGRILALIRSKTLNLKNIKHFILDECDKMLEQLDMRRDVQDIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVPRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPDEIDISSYSKGPDIFILYLFYTYFYLL 505
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Cavefish
Match: ddx39b (spliceosome RNA helicase DDX39B [Source:NCBI gene;Acc:103042292]) HSP 1 Score: 629.402 bits (1622), Expect = 0.000e+0 Identity = 290/395 (73.42%), Postives = 351/395 (88.86%), Query Frame = 1
Query: 115 KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
K+ VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +K+ P ++V TPGR+L L + K+L++ +IKHFI+DECDK+L+ + MR DVQ+IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+EIF+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR++ QEER+ARYQ FK+F++RILVATNLFGRG+DIERVNI FNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DA+TLN+VQ+RF V+I+++P +I++Y+E+
Sbjct: 40 KEGVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPAVKVAVFFGGLSIKKDEEVLKRESPHVVVGTPGRILALSRNKSLNLRHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRAMPQEERLARYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDARTLNDVQDRFEVNISELPEEIDISSYIEQ 434
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Cavefish
Match: ENSAMXT00000045184.1 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:103037120]) HSP 1 Score: 250.751 bits (639), Expect = 7.344e-77 Identity = 140/376 (37.23%), Postives = 222/376 (59.04%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVL--DSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP-SIDE 1278
F D+ LK ELL I + G+E PS +Q E IP A+ D+L +AK+G GK+ +++ L++I+ ++ + +V+ TRELA Q+S+ + SK++ +KV GG ++ DI + ++ +I+ATPGR+LDLIK+ VD ++ ++DE DK+L D V + ++ I + +Q++++SAT ++ K + P EI + + LTL G+ Q+Y +TE++K L L L NQ IIF S QR L + + + IH + QE R + F+N R LV T+LF RGIDI+ VN+V N+D P++++TYLHR+ R+GRFG GLAI ++ E D L ++++ V I IP SID+
Sbjct: 94 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPMLERIDLKKDHVQAMVMVPTRELALQVSQISIQLSKHLGGVKVMATTGGTNLRDDIMRLDETV-HVIIATPGRILDLIKKGVAKVDKVQMIVMDEADKLLSQDFVVL---IEDIISFLAKNRQILLYSATFPTSVQKFMSKHLQKPYEINLMEE--LTLKGITQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITAE-DRFNLKAIEDQLVTDIKPIPGSIDK 462
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Sea Lamprey
Match: ddx39aa (DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Aa [Source:ZFIN;Acc:ZDB-GENE-030131-4275]) HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0 Identity = 264/401 (65.84%), Postives = 334/401 (83.29%), Query Frame = 1
Query: 100 TGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMT-DPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
T + KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MDVLCQAKSGMGKTAVFVLATLQQ+E + VLV+CHTRELAFQISKEYERFSKYMP++KV+VF+GG+ IK D E +KK+CP I+V TPGRL L + K L++ ++KHFI+DECDK+L+ + +V+Q+ ++P Q+++ + + C + P+E+F+D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQV+IFVKSVQRCMAL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAK LN+VQ+RF V+++++P ++++Y+E+
Sbjct: 26 TEAPVKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPTDGQVSVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRLA-LSRNKTLNLKHVKHFILDECDKMLEQLVTASEVEQLLHISPH--QLLLDACFADLTVVLCCSSWQCYPPMEVFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCMALAQLLIEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDENDAKILNDVQDRFEVNVSELPDEIDLSSYIEQ 423
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Sea Lamprey
Match: ddx6 (DEAD (Asp-Glu-Ala-Asp) box helicase 6 [Source:ZFIN;Acc:ZDB-GENE-070912-83]) HSP 1 Score: 244.973 bits (624), Expect = 2.529e-75 Identity = 139/382 (36.39%), Postives = 216/382 (56.54%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVL--DSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
F D+ LK ELL I + G+E PS +Q E IP A+ D+L +AK+G GK+ +++ L++++ + + L + TRELA Q S+ SK+M +KV GG ++ DI + ++ +I+ATPGR+LDLI + VD ++ ++DE DK+L D V M D I R PR +Q++++SAT ++ + + P EI + + LTL G+ Q Y + E++K L L L NQ IIF S QR L + + + IH + QE R + F+ E R LV ++LF RGIDI+ VN+V N+D P++++TYLHR+ R+GR+G GLAI ++ E D L ++E+ I IP + + Y+ E
Sbjct: 101 FEDYCLKRELLMGIFEKGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDMKKPYIQALTIVPTRELALQTSQICIELSKHMGGVKVMATTGGTNLRDDILRLDETV-HVIIATPGRILDLINKGLAKVDAVQMIVLDEADKLLSQDFVQMLDD---IIRAMPRNRQILLYSATFPLSVQKFMNRHLQKPYEINLMEE--LTLKGITQFYAYVNERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMKQEHRNRVFHDFRRGECRNLVCSDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRYGHLGLAINLITYE-DRFNLKGIEEQLGTEIKPIPGTIDKSLYVAE 475
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000216.1 (pep scaffold:Pmarinus_7.0:GL476721:117971:126978:-1 gene:ENSPMAG00000000186.1 transcript:ENSPMAT00000000216.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 204.527 bits (519), Expect = 1.024e-60 Identity = 116/366 (31.69%), Postives = 210/366 (57.38%), Query Frame = 1
Query: 211 GFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQI-EADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLD-LIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
G++ P+++Q E IP A+ D++ A++G GKT F L LQ + +A + L LVL TRELAFQIS+++E + +K +V GG+ + + ++ K P +I+ATPGRL+D L K ++ +K+ ++DE D++L+ + +V +I ++ P+ ++ +FSAT++K+++ + + + +P++ + + T+ L+Q+Y+ + K K+ L+ +L+ L N IIF + + LL F +I +H ++Q +R+ FK + IL+AT++ RG+DI V++V N+D+P S Y+HRV R R G G +ITFVS + D + ++ + P+ +E + ER
Sbjct: 14 GWKQPTKIQVEAIPVALQGKDIIGLAETGSGKTGAFALPILQALLDAPQRLF-ALVLTPTRELAFQISEQFEALGSSI-GIKSAVVVGGIDMMSQSLALAKK-PHVIIATPGRLVDHLENTKGFNIRALKYLVMDEADRILN-MDFETEVDKILKVIPKERKTYLFSATMTKKVQKLQRAALKEPVKCSVSTKYQ-TVEKLQQYYVFIPAKFKDSYLVYILNELAGNSFIIFCSTCNNTQRIALLLRNLGFTAIPLHGQMSQNKRLGSLNKFKGKARSILLATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRSGKSITFVS-QYDVELFQRIEHLIGKKLPAFPTNEEEVMMLTER 373
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Sea Lamprey
Match: ddx49 (DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Source:ZFIN;Acc:ZDB-GENE-031030-3]) HSP 1 Score: 188.734 bits (478), Expect = 2.623e-54 Identity = 123/379 (32.45%), Postives = 201/379 (53.03%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIK-QKALSVDNIKHFIIDECDKVLD--SVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLL----DSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNL----FGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSD------EADAKTLNEVQERFV 1245
F+ L L++ G P+ VQ CIP + D + A++G GKTA FVL LQ++ D LVL TRELA+QI++++ K + LK SV GG+ + + + P +++ATPGRL D ++ S+ I+ ++DE D++L+ + D+Q I L P +Q ++FSATL+ ++ + +T+P + + T+ L Q YI + +K K+ L+ ++ D+ +I+F + + C L +L NFPS+A+H + Q ER A FK+ +IL+AT++ + RG+DI V +V N++ P TY+HRV R R G G+AIT V+ +A +T+N + FV
Sbjct: 7 FKRLGLDDWLMQQCKQMGISKPTPVQENCIPPILRGQDCMGCAQTGSGKTAAFVLPILQKLSEDPFGIFCLVLAPTRELAYQIAEQFRVMGKPL-GLKDSVIVGGMDSVRQAQELARK-PHVVIATPGRLADHLRSSNTFSLKKIQFLVMDEADRLLEQGATDFTKDLQVILAL-PAKRQTLLFSATLTDTLQELRNLALTNPF-FWESKEPVRTVEELDQRYILVADKVKDAYLVHIIQKIQDAHDDWSIIVFTNTCKNCQVLNMMLRHFNFPSVALHSMMRQTERFASLSKFKSSMFKILIATDVASSFWARGLDIPTVQVVLNHNTPSLPKTYIHRVGRTARAGRNGVAITIVTQYDIHLVQAIEETINTKLKEFV 381
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Sea Lamprey
Match: ENSPMAT00000003898.1 (pep scaffold:Pmarinus_7.0:GL481305:13824:21767:-1 gene:ENSPMAG00000003524.1 transcript:ENSPMAT00000003898.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 187.193 bits (474), Expect = 4.070e-53 Identity = 122/402 (30.35%), Postives = 207/402 (51.49%), Query Frame = 1
Query: 148 HSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQI---------EADENLSRV------------LVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLD---SVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQV-IIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDE 1278
H F + L ++ ++ C +E P+ VQ IP D++ A++G GKTA F+L L QI E +N LVL TRELA QI E +F+ Y ++ V YGG I + ++K C ++VATPGRL+D++++ + +D+ ++ ++DE D++LD +R V+Q T +Q +MFSAT KEI+ + + F+ D + + + + + Q + + E +K L+DLL++ + + ++FV++ + AL LC + + +IH +Q +R F+ + ILVAT + RG+DI V V N+D+P D + Y+HR+ R GR G G A +F +++ + T E+ V + ++PS E
Sbjct: 57 HIESFHELELGEIIMSSVTLCRYERPTPVQKYAIPIIKAKRDLMACAQTGSGKTAAFLLPILSQIYSGGPGKVVEDTKNQQETVKYGQRKQYPMSLVLAPTRELALQIYDEARKFA-YRSCVRPCVVYGGADIGNQVRELQKGC-HLLVATPGRLVDMMERGKVGLDHCRYLVLDEADRMLDMGFEPQIRRIVEQDVMPTKGDRQTLMFSATFPKEIQILARDFLEDYIFLAVGRVGSAS-ENITQKVVWVEEMDKRSFLLDLLNATGRDSLTLVFVETKKGADALQGFLCSEGYSCTSIHGDRSQRDREEALSLFRTGRRPILVATAVAARGLDIPNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGQATSFYNEKNENMT-RELLHLLVEAHQEVPSWLE 454
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Yeast
Match: SUB2 (Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000002242]) HSP 1 Score: 515.768 bits (1327), Expect = 0.000e+0 Identity = 239/382 (62.57%), Postives = 304/382 (79.58%), Query Frame = 1
Query: 127 KDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKK--SCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
K SYV +HS+GF+DFLLKPEL RAIIDCGFEHPS+VQ IPQ+I DVLCQAKSG+GKTAVFVL+TLQQ++ V+V+C+ RELA+QI EY RFSKYMP +K +VFYGG PI D E +K + P I+VATPGRL L+++K + + ++K+F+IDECDKVL+ + MR DVQ+IFR TPR KQVMMFSATLS+EIRP+C++F+ +PLEIF+D+++KLTLHGL+Q+YIKL E+EKN++L LLD L FNQVIIFVKS R L LL NFP+I +H + QEERIARY++FK+FEKRI V+T++FGRGIDIER+N+ NYD+ ++D YLHRV RAGRFGTKGLAI+FVS + D + L ++QERF V I + P
Sbjct: 53 KGSYVGIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVPGEVAVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSKEDEEVLAKIQERFDVKIAEFP 434
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Yeast
Match: FAL1 (Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3 [Source:SGD;Acc:S000002428]) HSP 1 Score: 268.085 bits (684), Expect = 1.766e-85 Identity = 139/375 (37.07%), Postives = 230/375 (61.33%), Query Frame = 1
Query: 151 SSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVL-DSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPS 1269
SS F LK +LLR I GFE PS +Q I Q I DV+ QA+SG GKTA F + LQ I+ + + L+L TRELA QI + + YM ++ GG +K D++ ++K Q + TPGR+LD+IK++ L N++ ++DE D++L +++ + + IF P+ QV++ SAT++K+I V +KFM DP++I + D +++L G+KQ+ + + ++E K L D+ DSLT Q +IF + ++ L L + NF +++H + QEER F+ R+L++T+++ RGID+++V++V NYD+PE + Y+HR+ R+GRFG KG+AI F++ +AD L E+++ + + I +P+
Sbjct: 22 SSTFESMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAIDLRKKDLQALILSPTRELASQIGQVVKNLGDYM-NVNAFAITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTRKFMNDPVKILVKRD-EISLEGIKQYVVNVDKEEWKFDTLCDIYDSLTITQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFIT-KADLAKLREIEKFYSIKINPMPA 393
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Yeast
Match: TIF1 (Translation initiation factor eIF4A; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G; protein abundance increases in response to DNA replication stress; TIF1 has a paralog, TIF2, that arose from the whole genome duplication [Source:SGD;Acc:S000001767]) HSP 1 Score: 238.424 bits (607), Expect = 3.567e-74 Identity = 145/371 (39.08%), Postives = 217/371 (58.49%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPS 1269
F D L LLR + GFE PS +Q I I DVL QA+SG GKT F +A LQ+I+ + L+L TRELA QI K + +M +KV GG D E ++ + QI+V TPGR+ D I+++ D IK FI+DE D++L S + + QIF L P QV++ SAT+ ++ V KFM +P+ I + D +LTL G+KQ Y+ + E+E K + L DL DS++ Q +IF + ++ L L F AI+ L Q+ER + F++ RIL++T+L RGID+++V++V NYD+P + + Y+HR+ R GRFG KG+AI FV++E D + E+++ + I ++PS
Sbjct: 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGLRDA--QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSS-GFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKD-ELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNE-DVGAMRELEKFYSTQIEELPS 388
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Yeast
Match: TIF2 (Translation initiation factor eIF4A; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G; protein abundance increases in response to DNA replication stress; TIF2 has a paralog, TIF1, that arose from the whole genome duplication [Source:SGD;Acc:S000003674]) HSP 1 Score: 238.424 bits (607), Expect = 3.567e-74 Identity = 145/371 (39.08%), Postives = 217/371 (58.49%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPS 1269
F D L LLR + GFE PS +Q I I DVL QA+SG GKT F +A LQ+I+ + L+L TRELA QI K + +M +KV GG D E ++ + QI+V TPGR+ D I+++ D IK FI+DE D++L S + + QIF L P QV++ SAT+ ++ V KFM +P+ I + D +LTL G+KQ Y+ + E+E K + L DL DS++ Q +IF + ++ L L F AI+ L Q+ER + F++ RIL++T+L RGID+++V++V NYD+P + + Y+HR+ R GRFG KG+AI FV++E D + E+++ + I ++PS
Sbjct: 24 FDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHM-DIKVHACIGGTSFVEDAEGLRDA--QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSS-GFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKD-ELTLEGIKQFYVNVEEEEYKYECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNE-DVGAMRELEKFYSTQIEELPS 388
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Yeast
Match: DHH1 (Cytoplasmic DEAD-box helicase, stimulates mRNA decapping; coordinates distinct steps in mRNA function and decay, interacting with both decapping and deadenylase complexes; role in translational repression, mRNA decay, and possibly mRNA export; interacts and cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body (PB) assembly, while ATPase stimulation by Not1p promotes PB disassembly; forms cytoplasmic foci on replication stress [Source:SGD;Acc:S000002319]) HSP 1 Score: 237.654 bits (605), Expect = 1.565e-72 Identity = 139/390 (35.64%), Postives = 213/390 (54.62%), Query Frame = 1
Query: 130 DSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
D ++ + F DF LK ELL I + GFE PS +Q E IP AI D+L +AK+G GKTA FV+ TL++++ N + L++ TRELA Q S+ K+ + V GG ++ DI + ++ I+V TPGR+LDL +K + + FI+DE DK+L S + ++QI P Q ++FSAT ++ K + P EI + + LTL G+ Q+Y + E++K L L L NQ IIF S R L + + + H + Q+ER + F+ + R LV ++L RGIDI+ VN+V N+D P+ ++TYLHR+ R+GRFG GLAI + + D L ++++ I IP+ + + Y+ E
Sbjct: 38 DDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHC-GISCMVTTGGTNLRDDILRLNETV-HILVGTPGRVLDLASRKVADLSDCSLFIMDEADKML-SRDFKTIIEQILSFLPPTHQSLLFSATFPLTVKEFMVKHLHKPYEINLMEE--LTLKGITQYYAFVEERQKLHCLNTLFSKLQINQAIIFCNSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFGHLGLAINLI-NWNDRFNLYKIEQELGTEIAAIPATIDKSLYVAE 421
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Nematostella
Match: EDO43394 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RYW1]) HSP 1 Score: 600.127 bits (1546), Expect = 0.000e+0 Identity = 287/398 (72.11%), Postives = 349/398 (87.69%), Query Frame = 1
Query: 109 EAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEI-TNYMEE 1299
+AKK VK +YVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD++CQAKSGMGKTAVFVLATLQQ+E + VLV+CHTRELAFQI KEYERF KYM ++K++VF+GG+ IK D +++K +CP I+V TPGR+L L ++K L++ + KHFI+DECDK+L+ + MR DVQ++FR+TP KQVMMFSATL KEIR VCKKFM DP+E+++D+++KLTLHGL+Q+Y+KL + EKN++L DLLD L FNQVIIFVKSVQRC AL +LL +QNFP+I IHR + QEER+ARYQ FKNFEKR+LVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQ+RF V++ ++P DEI +Y+E+
Sbjct: 32 QAKKDVKGTYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLEPVDGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVVGTPGRILALTREKTLNLKHAKHFILDECDKMLEQLDMRRDVQEVFRMTPHEKQVMMFSATLPKEIRSVCKKFMQDPMEVYVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDLLEFNQVIIFVKSVQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQDRFEVNVGELP--DEIDMSYVEQ 427
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Nematostella
Match: EDO46214 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RQR7]) HSP 1 Score: 256.914 bits (655), Expect = 8.178e-81 Identity = 143/377 (37.93%), Postives = 221/377 (58.62%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKL--------TEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F LL P LLR + + GFE PS +Q + IP +D++ QAKSG GKT VF + L+ + + N ++++L TRE+A Q+ + L VF GG+ ++ D +++K SC I V TPGR+ LI+QK L ++++ FI+DE DK+LD S + + IF P KQ+M FSAT + + KK+MT+P + + N + +L G+KQ Y + T +EK LI LL S+ FNQ ++F R +L + LC + +PS I TQ +R+ + K+F RIL++T+L RGID E VN+V N D+P + +TYLHR+ RAGRFGT+G+A+T+V++ + + L +++ V + +P
Sbjct: 23 FHSLLLSPTLLRGLNEAGFEKPSPIQLKAIPLGRCGLDLIAQAKSGTGKTCVFSVIALENVITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALK-SC-HIAVGTPGRVKYLIEQKYLKTESVRMFILDEADKLLDE-SFQQQINWIFSALPENKQMMAFSATYPEVLANHLKKYMTEPTFVRL-NAADPSLQGIKQFYSLVRFHPLPHKTFQEKVDGLIKLLSSVNFNQCLVFSNYQIRAKSLSDTLCRKGWPSTFIAGYQTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRAGRFGTEGMAVTYVANGKEERELRDIERSIDVKMELLP 395
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Nematostella
Match: EDO48460 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIU5]) HSP 1 Score: 251.136 bits (640), Expect = 2.295e-78 Identity = 134/365 (36.71%), Postives = 215/365 (58.90%), Query Frame = 1
Query: 175 LKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
L+ +LLR I GFE PS +Q I + DV+ QA+SG GKTA F ++ LQ I+ + LVL TRELA QI K YM S++ GG I DI + I+ TPGR+ D+I+++ L +IK ++DE D++L+ + + ++R P QV++ SATL EI + KFMTDP+ I + D +LTL G+KQ ++ + +E K L DL D+LT Q +IF + ++ L + E NF ++H + Q+ER A + F+ + R+L++T+++ RG+D+++V++V NYD+P + + Y+HR+ R+GRFG KG+AI FV + D + L ++++ + I ++P
Sbjct: 41 LREDLLRGIYAYGFEKPSAIQQRAIKPILKGRDVIAQAQSGTGKTATFSISVLQAIDTQLREPQALVLSPTRELANQIQKVVLALGDYM-SVQCHACIGGTNIGEDIRKLDYG-QHIVSGTPGRVFDMIRRRNLRTRSIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLLSATLPHEILEMTSKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSD-DIRILRDIEQYYSTQIDEMP 400
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Nematostella
Match: EDO39940 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S8H2]) HSP 1 Score: 249.98 bits (637), Expect = 1.155e-77 Identity = 146/380 (38.42%), Postives = 221/380 (58.16%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
F D+ LK ELL I + GF+ PS +Q E IP A+ D+L +AK+G GKTA +++ L++ + +N + LVL TRELA Q S+ K+M + +V V GG +K DI + +IVATPGR+LDL+K+K + + ++DE DK+L S+ + ++QI + P +Q+++FSAT +R +K + P EI + ++ LTLHG+ Q+Y + EK+K L L L NQ IIF SVQR L + E F IH ++Q R + F+ R LV ++LF RGIDI+ VN+V N+D P++S+TYLHR+ R+GRFG G+AI ++ + D L +++ I IPS+ + Y+ E
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGKTAAYLVPLLERTDTTKNCIQALVLVPTRELALQTSQICIELGKHMGA-QVMVTTGGTSLKDDILRLYNKV-HVIVATPGRVLDLMKKKLADMSKCQMLVMDEADKLL-SMDFKKMLEQIIKHLPENRQILLFSATFPISVRDFKEKHLRKPYEINLMDE--LTLHGVTQYYAFVEEKQKVHCLNTLFQKLQINQSIIFCNSVQRVELLARKILELGFSCFYIHARMSQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYD-DRFDLYKIENELDTEIKPIPSVIDKKVYVAE 422
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Nematostella
Match: EDO45225 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RTJ5]) HSP 1 Score: 208.379 bits (529), Expect = 5.487e-62 Identity = 134/377 (35.54%), Postives = 216/377 (57.29%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEA---DEN---LSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNK--QLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F D LK LLR I GFE PS +Q I DV+ QA+SG GKTA F ++ LQ+I+ D+N + LVL TRELA QI K YM +K GG ++ D +++ ++V TPGR+ D+I + L+ +IK F++DE D++L S + + +F P QV++ SAT+ ++ V KFM D + I + + ++TL G+KQ ++ L EKE K L DL ++LT Q +IF + ++ L + E++ ++H ++Q+ER + F++ R+L+ T+L RGID+ +V++V NYD+P + + Y+HR+ R GRFG KG AI FV+++ D + L ++++ + I ++P
Sbjct: 35 FDDMNLKEALLRGIYAYGFEKPSAIQQRAIRPCCQARDVIAQAQSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGDYM-HVKCHACIGGTNVREDRMKLEEGV-HVVVGTPGRVFDMINRGVLNTRDIKLFVLDEADEML-SRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEVTNKFMRDVVRILVKRE-EVTLEGIKQFFV-LVEKEDWKLDTLCDLYETLTITQAVIFANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHRIGRGGRFGRKGAAINFVTND-DVRMLKDIEQYYNTKIEEMP 405
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Medaka
Match: DDX39A (DExD-box helicase 39A [Source:NCBI gene;Acc:101163463]) HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0 Identity = 299/401 (74.56%), Postives = 355/401 (88.53%), Query Frame = 1
Query: 100 TGSEA-KKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
+G+ A KK VK SYVS+HSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYMPS+KVSVF+GG+ IK + +++KK+CP I+V TPGR L LI+ K LSV NIKHF++DECDK+L+ + MR DVQ+IFRLTP KQVMMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSV RC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE DAKTLNEVQ+RF V++ ++P +I++Y+E+
Sbjct: 25 SGTPAGKKEVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGMAIKNNEDTLKKNCPHIVVGTPGRTLALIRNKTLSVKNIKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVNRCVALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEVDAKTLNEVQDRFEVNVAELPDEIDISSYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Medaka
Match: DDX39A (ATP-dependent RNA helicase DDX39A [Source:NCBI gene;Acc:101168128]) HSP 1 Score: 634.41 bits (1635), Expect = 0.000e+0 Identity = 292/396 (73.74%), Postives = 350/396 (88.38%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
KK VK SYVS+HSSGFRDFLLKPELLRAIIDCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYMP++K +VF+GG+ IK D + +KK+CP I+V TPGR+L LI+ K L++ NIKHF++DECDK+L+ + MR DVQ IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAKTLN+VQ+RF V++ ++P +I++Y+E+
Sbjct: 46 GKKEVKGSYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVTVLVMCHTRELAFQISKEYERFSKYMPTVKAAVFFGGMAIKNDEDVLKKNCPHIVVGTPGRILALIRNKTLNLKNIKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDISSYIEQ 441
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Medaka
Match: DDX39A (ATP-dependent RNA helicase DDX39A [Source:NCBI gene;Acc:101168128]) HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0 Identity = 292/396 (73.74%), Postives = 350/396 (88.38%), Query Frame = 1
Query: 112 AKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
KK VK SYVS+HSSGFRDFLLKPELLRAIIDCGFEHPS+VQHECIPQAIL MD+LCQAKSGMGKTAVFVLATLQQIE + VLV+CHTRELAFQISKEYERFSKYMP++K +VF+GG+ IK D + +KK+CP I+V TPGR+L LI+ K L++ NIKHF++DECDK+L+ + MR DVQ IFR+TP KQVMMFSATLSKEIRPVC+KFM DP+E+F+D+++KLTLHGL+Q+Y KL + EKN++L DLLD L FNQV+IFVKSVQRC+AL LL EQNFP+IAIHR + QEER++RYQ FK+F++RILVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLA+TFVSDE DAKTLN+VQ+RF V++ ++P +I++Y+E+
Sbjct: 30 GKKEVKGSYVSIHSSGFRDFLLKPELLRAIIDCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVTVLVMCHTRELAFQISKEYERFSKYMPTVKAAVFFGGMAIKNDEDVLKKNCPHIVVGTPGRILALIRNKTLNLKNIKHFVLDECDKMLEQLDMRRDVQDIFRITPHEKQVMMFSATLSKEIRPVCRKFMQDPMEVFVDDETKLTLHGLQQYYCKLKDSEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNDVQDRFEVNVAELPEEIDISSYIEQ 425
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Medaka
Match: ENSORLT00000028513.1 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:101166148]) HSP 1 Score: 249.595 bits (636), Expect = 1.893e-76 Identity = 141/382 (36.91%), Postives = 222/382 (58.12%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVL--DSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
F D+ LK ELL I + G+E PS +Q E IP A+ D+L +AK+G GK+ +++ L++I+ ++ + +V+ TRELA Q+S+ + SK+M +KV GG ++ DI + + +++ATPGR+LDLIK+ VD ++ ++DE DK+L D V + ++ I + +Q++++SAT ++ K + P EI + + LTL G+ Q Y +TE++K L L L NQ IIF S QR L + + + IH + QE R + F+N R LV T+LF RGIDI+ VN+V N+D P++++TYLHR+ R+GRFG GLAI ++ E D L ++E+ V I IPS + + Y+ E
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQISIQISKHMGGVKVMATTGGTNLRDDIMRLDEIV-HVVIATPGRILDLIKKGVAKVDRVQMIVMDEADKLLSQDFVVL---IEDIISFLAKNRQILLYSATFPMSVQKFMAKHLQKPYEINLMEE--LTLKGITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSE-DRFNLKAIEEQLVTDIKPIPSSIDKSLYVAE 465
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Medaka
Match: ENSORLT00000045064.1 (probable ATP-dependent RNA helicase ddx6 [Source:NCBI gene;Acc:101166148]) HSP 1 Score: 249.595 bits (636), Expect = 1.893e-76 Identity = 141/382 (36.91%), Postives = 222/382 (58.12%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVL--DSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEE 1299
F D+ LK ELL I + G+E PS +Q E IP A+ D+L +AK+G GK+ +++ L++I+ ++ + +V+ TRELA Q+S+ + SK+M +KV GG ++ DI + + +++ATPGR+LDLIK+ VD ++ ++DE DK+L D V + ++ I + +Q++++SAT ++ K + P EI + + LTL G+ Q Y +TE++K L L L NQ IIF S QR L + + + IH + QE R + F+N R LV T+LF RGIDI+ VN+V N+D P++++TYLHR+ R+GRFG GLAI ++ E D L ++E+ V I IPS + + Y+ E
Sbjct: 91 FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERIDLKKDHIQAIVMVPTRELALQVSQISIQISKHMGGVKVMATTGGTNLRDDIMRLDEIV-HVVIATPGRILDLIKKGVAKVDRVQMIVMDEADKLLSQDFVVL---IEDIISFLAKNRQILLYSATFPMSVQKFMAKHLQKPYEINLMEE--LTLKGITQFYAYVTERQKVHCLNTLFSRLQINQSIIFCNSTQRVELLAKKITQLGYSCFYIHAKMMQEYRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRIGRSGRFGHLGLAINLITSE-DRFNLKAIEEQLVTDIKPIPSSIDKSLYVAE 465
BLAST of Spliceosome RNA helicase DDX39B vs. Planmine SMEST
Match: SMESG000064512.1 (SMESG000064512.1) HSP 1 Score: 825.083 bits (2130), Expect = 0.000e+0 Identity = 401/402 (99.75%), Postives = 401/402 (99.75%), Query Frame = 1
Query: 97 ITGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
ITGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLT RCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER
Sbjct: 19 ITGSEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTRRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 420
BLAST of Spliceosome RNA helicase DDX39B vs. Planmine SMEST
Match: SMESG000035241.1 (SMESG000035241.1) HSP 1 Score: 685.256 bits (1767), Expect = 0.000e+0 Identity = 319/400 (79.75%), Postives = 368/400 (92.00%), Query Frame = 1
Query: 106 SEAKKTVKDSYVSMHSSGFRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEA-DENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKEKNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIPSIDEITNYMEER 1302
++A K VK SYVSMHSSGFRDFLLKPELLRAI+DCGFEHPS+VQHECIPQAIL DVLCQAKSGMGKTAVFVLATLQQ++ D+ +VLVLCHTRELAFQISKEYERFSKYM ++ VSVFYGG+P++ DIE +KKS PQIIVATPGRLLDL++QKAL++ +IKHFI+DECDK+LD+VSMRGDVQ++F+LTP KQVMMFSATLSKEIRP+CKKFM DPLEIFID+DSKLTLHGLKQHY+K+ E EKN++L +LLD L FNQVI+FVKSVQRC+ALCNLLCEQNFP+IAIHR +TQE+RI+RYQ+FKNF+KR+LVATNLFGRG+DIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF+SDE DAK LN+VQ RF V+I+++P + EIT YMEER
Sbjct: 24 TQATKGVKGSYVSMHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILLTDVLCQAKSGMGKTAVFVLATLQQLDTLDDASCKVLVLCHTRELAFQISKEYERFSKYMSNINVSVFYGGIPLRNDIEKLKKSIPQIIVATPGRLLDLVRQKALTLKSIKHFILDECDKMLDNVSMRGDVQEVFKLTPHQKQVMMFSATLSKEIRPICKKFMQDPLEIFIDDDSKLTLHGLKQHYLKVKENEKNRKLFELLDELQFNQVIVFVKSVQRCIALCNLLCEQNFPAIAIHRQMTQEDRISRYQAFKNFQKRLLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFISDENDAKILNDVQNRFEVNISELPDVVEITTYMEER 423
BLAST of Spliceosome RNA helicase DDX39B vs. Planmine SMEST
Match: SMESG000078818.1 (SMESG000078818.1) HSP 1 Score: 248.054 bits (632), Expect = 5.305e-77 Identity = 130/370 (35.14%), Postives = 217/370 (58.65%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F LK +LLR I GFE PS +Q I Q + DV+ QA+SG GKT++ +++LQ + D +++L+L TRELA Q K YM +++ GG + D++ + I+ TPGR+ D+++++ L I ++DE D++LD + + QI+R P QV++ SATL EI + KFMT+P+ I + D +LTL G+KQ+++ + +E K L D+ D++T QV+IF + ++ L + E NF +IH + Q ER + F+ E R+L+ T+++ RGID++ V++V NYD+P + + Y+HR+ R+GR+G KG+AI FV + D + L ++++ + I ++P
Sbjct: 22 FNKMNLKEDLLRGIYAYGFEKPSAIQARAIKQIVKGRDVIAQAQSGTGKTSLIAISSLQLTDIDLRETQILILSPTRELAQQTQKVILALGDYM-NVQCHACIGGASMAQDMKKLDYG-QHIVSGTPGRVFDMMQRRNLRTSKISTLVLDEADEMLDK-GFKEQIYQIYRYLPPGTQVILISATLPHEILEMTSKFMTNPIRILVKRD-ELTLEGIKQYFVSVEREEWKFDTLCDIYDTVTVTQVVIFCNTKRKVEWLTEKMRENNFTVSSIHGDMPQGERDEITRQFRALETRVLITTDVWARGIDVQHVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSD-DVRILRDIEQFYATQIDEMP 386
BLAST of Spliceosome RNA helicase DDX39B vs. Planmine SMEST
Match: SMESG000078818.1 (SMESG000078818.1) HSP 1 Score: 247.669 bits (631), Expect = 6.881e-77 Identity = 130/370 (35.14%), Postives = 217/370 (58.65%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F LK +LLR I GFE PS +Q I Q + DV+ QA+SG GKT++ +++LQ + D +++L+L TRELA Q K YM +++ GG + D++ + I+ TPGR+ D+++++ L I ++DE D++LD + + QI+R P QV++ SATL EI + KFMT+P+ I + D +LTL G+KQ+++ + +E K L D+ D++T QV+IF + ++ L + E NF +IH + Q ER + F+ E R+L+ T+++ RGID++ V++V NYD+P + + Y+HR+ R+GR+G KG+AI FV + D + L ++++ + I ++P
Sbjct: 27 FNKMNLKEDLLRGIYAYGFEKPSAIQARAIKQIVKGRDVIAQAQSGTGKTSLIAISSLQLTDIDLRETQILILSPTRELAQQTQKVILALGDYM-NVQCHACIGGASMAQDMKKLDYG-QHIVSGTPGRVFDMMQRRNLRTSKISTLVLDEADEMLDK-GFKEQIYQIYRYLPPGTQVILISATLPHEILEMTSKFMTNPIRILVKRD-ELTLEGIKQYFVSVEREEWKFDTLCDIYDTVTVTQVVIFCNTKRKVEWLTEKMRENNFTVSSIHGDMPQGERDEITRQFRALETRVLITTDVWARGIDVQHVSLVINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKSD-DVRILRDIEQFYATQIDEMP 391
BLAST of Spliceosome RNA helicase DDX39B vs. Planmine SMEST
Match: SMESG000040535.1 (SMESG000040535.1) HSP 1 Score: 239.195 bits (609), Expect = 8.445e-74 Identity = 133/370 (35.95%), Postives = 209/370 (56.49%), Query Frame = 1
Query: 160 FRDFLLKPELLRAIIDCGFEHPSQVQHECIPQAILCMDVLCQAKSGMGKTAVFVLATLQQIEADENLSRVLVLCHTRELAFQISKEYERFSKYMPSLKVSVFYGGVPIKTDIESIKKSCPQIIVATPGRLLDLIKQKALSVDNIKHFIIDECDKVLDSVSMRGDVQQIFRLTPRCKQVMMFSATLSKEIRPVCKKFMTDPLEIFIDNDSKLTLHGLKQHYIKLTEKE-KNKQLIDLLDSLTFNQVIIFVKSVQRCMALCNLLCEQNFPSIAIHRSLTQEERIARYQSFKNFEKRILVATNLFGRGIDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEADAKTLNEVQERFVVSITDIP 1266
F D LK ELLR I GFE PS +Q I AI DV+ QA+SG GKT F ++ LQ ++ N + ++L TRELA Q + +M +K GG +K DI +IK S Q++V TPGR+ D+I ++ + +IK F++DE D++L S + DV Q+ + SAT+ ++ V FM DP+ I + N +LTL G++Q Y+ E K + L+DL +LT Q +IF ++L L +Q F A+H + Q R F+N R+L+ T+L RGID++ ++IV NYD+P++ + Y+HR+ R GR+G KG+A+ FV+++ D + + E++ + +I ++P
Sbjct: 9 FEDLNLKEELLRGIFAYGFEKPSAIQKRAILPAIEGHDVIAQAQSGSGKTGTFAISVLQNVDQSLNKVQAIILAPTRELAQQTNNIITSIGDFM-GVKCCACIGGRNVKDDIRNIK-SGMQVVVGTPGRVKDMINKRHIETTHIKIFVLDEADEML-SRGFQQDVCDCLGYLEPGTQIFLLSATMPDDVLSVANSFMKDPVRILV-NKEELTLEGIRQFYVDCGRDEYKCETLVDLYHNLTIKQAVIFCNYKTSVISLTENLTQQGFTVSAVHSDIDQATRDQIMVQFRNGSTRVLITTDLLYRGIDVQNISIVINYDLPKNKENYIHRIGRCGRYGRKGVALNFVTNK-DFQAMKEIERFYNTAIQELP 373 The following BLAST results are available for this feature:
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of Spliceosome RNA helicase DDX39B vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024887 ID=SMED30024887|Name=Spliceosome RNA helicase DDX39B|organism=Schmidtea mediterranea sexual|type=transcript|length=1559bpback to top protein sequence of SMED30024887-orf-1 >SMED30024887-orf-1 ID=SMED30024887-orf-1|Name=SMED30024887-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=421bp MATEEQELLDYEEDEQVVITGSEAKKTVKDSYVSMHSSGFRDFLLKPELLback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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