SMED30024849
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024849 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 10
Alignments
SMED30024849 aligns in the following genomic locations:
Homology
BLAST of SMED30024849 vs. Ensembl Human
Match: RBPJ (recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 53 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 448 HSP 2 Score: 65.4698 bits (158), Expect = 1.106e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Human
Match: RBPJ (recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 52 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 447 HSP 2 Score: 65.4698 bits (158), Expect = 1.174e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 15 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 60
BLAST of SMED30024849 vs. Ensembl Human
Match: RBPJ (recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 52 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 447 HSP 2 Score: 65.4698 bits (158), Expect = 1.174e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 15 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 60
BLAST of SMED30024849 vs. Ensembl Human
Match: RBPJ (recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 31 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 426 HSP 2 Score: 56.225 bits (134), Expect = 8.692e-8 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -3 Query: 1336 MRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1455 MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 1 MRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 39
BLAST of SMED30024849 vs. Ensembl Human
Match: RBPJ (recombination signal binding protein for immunoglobulin kappa J region [Source:HGNC Symbol;Acc:HGNC:5724]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 51 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 446 HSP 2 Score: 65.4698 bits (158), Expect = 1.141e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 14 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 59
BLAST of SMED30024849 vs. Ensembl Celegans
Match: lag-1 (DNA-binding protein LAG-1; Lag-1 protein; Lin-12 And Glp-1 phenotype [Source:UniProtKB/TrEMBL;Acc:G5EDU7]) HSP 1 Score: 436.417 bits (1121), Expect = 2.897e-147 Identity = 223/432 (51.62%), Postives = 299/432 (69.21%), Query Frame = -1 Query: 183 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDS------------TQLKAFMGIGSTNPEQEMVELNLDSHK------------DYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTD---LCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDE--VEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDA---DDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFR---TAW---DHVQEPVEVPVNLVRSDGVVYSTGMTFTYR 1364 FFCPPPC+YL G+GW+ ++R+++ K+ ++ D+ T+L A++GIGS E++ ++ + + DY AAKTLYISDSDKRK+F L+ + F+ G ++G F S+RIKVISKPSKKKQS+KNTD LCIASGTKVALFNRLRSQTVSTRYLHVE FHASSTKWGAF++HL D+ E + F+V++G+++YG VKLV SVTG+ALPRL +RKVDK VILDA ++P+SQLHKCAF + D + +YLCLS DKIIQ+QA + +H R IND A WTIISTDKAEYR+F+A+G P+SP P+V L+++G G+ + VEL+G +F NL+VWFG P +T +R L C +P +++ R T W + VEVP++LVR DGVVYS+G+TF+Y+ Sbjct: 189 FFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSHDKIIQHQATAINEH-------RHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVGSLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYK 613 HSP 2 Score: 49.2914 bits (116), Expect = 6.597e-6 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = -3 Query: 1336 NNTIRRLTKEVMRKYLQDPRDH--ILIILHAKVAQKSYGNEKRFFLSPTVCIF 1488 ++++ LT + M +L + + ++ I HAKVAQKSYGNEKRFF P CI+ Sbjct: 146 GDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPP-CIY 197
BLAST of SMED30024849 vs. Ensembl Celegans
Match: lag-1 (DNA-binding protein LAG-1; Lag-1 protein; Lin-12 And Glp-1 phenotype [Source:UniProtKB/TrEMBL;Acc:G5EDU7]) HSP 1 Score: 436.032 bits (1120), Expect = 1.739e-146 Identity = 223/432 (51.62%), Postives = 299/432 (69.21%), Query Frame = -1 Query: 183 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDS------------TQLKAFMGIGSTNPEQEMVELNLDSHK------------DYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTD---LCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDE--VEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDA---DDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFR---TAW---DHVQEPVEVPVNLVRSDGVVYSTGMTFTYR 1364 FFCPPPC+YL G+GW+ ++R+++ K+ ++ D+ T+L A++GIGS E++ ++ + + DY AAKTLYISDSDKRK+F L+ + F+ G ++G F S+RIKVISKPSKKKQS+KNTD LCIASGTKVALFNRLRSQTVSTRYLHVE FHASSTKWGAF++HL D+ E + F+V++G+++YG VKLV SVTG+ALPRL +RKVDK VILDA ++P+SQLHKCAF + D + +YLCLS DKIIQ+QA + +H R IND A WTIISTDKAEYR+F+A+G P+SP P+V L+++G G+ + VEL+G +F NL+VWFG P +T +R L C +P +++ R T W + VEVP++LVR DGVVYS+G+TF+Y+ Sbjct: 233 FFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSHDKIIQHQATAINEH-------RHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVGSLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYK 657 HSP 2 Score: 48.9062 bits (115), Expect = 7.070e-6 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = -3 Query: 1336 NNTIRRLTKEVMRKYLQDPRDH--ILIILHAKVAQKSYGNEKRFFLSPTVCIF 1488 ++++ LT + M +L + + ++ I HAKVAQKSYGNEKRFF P CI+ Sbjct: 190 GDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPP-CIY 241
BLAST of SMED30024849 vs. Ensembl Celegans
Match: lag-1 (DNA-binding protein LAG-1; Lag-1 protein; Lin-12 And Glp-1 phenotype [Source:UniProtKB/TrEMBL;Acc:G5EDU7]) HSP 1 Score: 435.647 bits (1119), Expect = 2.012e-146 Identity = 223/432 (51.62%), Postives = 299/432 (69.21%), Query Frame = -1 Query: 183 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDS------------TQLKAFMGIGSTNPEQEMVELNLDSHK------------DYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTD---LCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDE--VEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDA---DDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFR---TAW---DHVQEPVEVPVNLVRSDGVVYSTGMTFTYR 1364 FFCPPPC+YL G+GW+ ++R+++ K+ ++ D+ T+L A++GIGS E++ ++ + + DY AAKTLYISDSDKRK+F L+ + F+ G ++G F S+RIKVISKPSKKKQS+KNTD LCIASGTKVALFNRLRSQTVSTRYLHVE FHASSTKWGAF++HL D+ E + F+V++G+++YG VKLV SVTG+ALPRL +RKVDK VILDA ++P+SQLHKCAF + D + +YLCLS DKIIQ+QA + +H R IND A WTIISTDKAEYR+F+A+G P+SP P+V L+++G G+ + VEL+G +F NL+VWFG P +T +R L C +P +++ R T W + VEVP++LVR DGVVYS+G+TF+Y+ Sbjct: 235 FFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSHDKIIQHQATAINEH-------RHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVGSLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYK 659 HSP 2 Score: 49.2914 bits (116), Expect = 6.897e-6 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = -3 Query: 1336 NNTIRRLTKEVMRKYLQDPRDH--ILIILHAKVAQKSYGNEKRFFLSPTVCIF 1488 ++++ LT + M +L + + ++ I HAKVAQKSYGNEKRFF P CI+ Sbjct: 192 GDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPP-CIY 243
BLAST of SMED30024849 vs. Ensembl Celegans
Match: lag-1 (DNA-binding protein LAG-1; Lag-1 protein; Lin-12 And Glp-1 phenotype [Source:UniProtKB/TrEMBL;Acc:G5EDU7]) HSP 1 Score: 432.565 bits (1111), Expect = 1.008e-143 Identity = 223/432 (51.62%), Postives = 299/432 (69.21%), Query Frame = -1 Query: 183 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDS------------TQLKAFMGIGSTNPEQEMVELNLDSHK------------DYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTD---LCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDE--VEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDA---DDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFR---TAW---DHVQEPVEVPVNLVRSDGVVYSTGMTFTYR 1364 FFCPPPC+YL G+GW+ ++R+++ K+ ++ D+ T+L A++GIGS E++ ++ + + DY AAKTLYISDSDKRK+F L+ + F+ G ++G F S+RIKVISKPSKKKQS+KNTD LCIASGTKVALFNRLRSQTVSTRYLHVE FHASSTKWGAF++HL D+ E + F+V++G+++YG VKLV SVTG+ALPRL +RKVDK VILDA ++P+SQLHKCAF + D + +YLCLS DKIIQ+QA + +H R IND A WTIISTDKAEYR+F+A+G P+SP P+V L+++G G+ + VEL+G +F NL+VWFG P +T +R L C +P +++ R T W + VEVP++LVR DGVVYS+G+TF+Y+ Sbjct: 352 FFCPPPCIYLIGQGWKLKKDRVAQLYKTLKASAQKDAAIENDPIHEQQATELVAYIGIGSDTSERQQLDFSTGKVRHPGDQRQDPNIYDYCAAKTLYISDSDKRKYFDLNAQFFYGCGMEIGGFVSQRIKVISKPSKKKQSMKNTDCKYLCIASGTKVALFNRLRSQTVSTRYLHVEGNAFHASSTKWGAFTIHLFDDERGLQETDNFAVRDGFVYYGSVVKLVDSVTGIALPRLRIRKVDKQQVILDASCSEEPVSQLHKCAFQMIDNELVYLCLSHDKIIQHQATAINEH-------RHQINDGAAWTIISTDKAEYRFFEAMGQVANPISPCPVVGSLEVDGHGEASRVELHGRDFKPNLKVWFGATPVETTFRSEESLHCSIPPVSQVRNEQTHWMFTNRTTGDVEVPISLVRDDGVVYSSGLTFSYK 776 HSP 2 Score: 48.521 bits (114), Expect = 9.660e-6 Identity = 24/53 (45.28%), Postives = 35/53 (66.04%), Query Frame = -3 Query: 1336 NNTIRRLTKEVMRKYLQDPRDH--ILIILHAKVAQKSYGNEKRFFLSPTVCIF 1488 ++++ LT + M +L + + ++ I HAKVAQKSYGNEKRFF P CI+ Sbjct: 309 GDSVQSLTSDRMIDFLSNKEKYECVISIFHAKVAQKSYGNEKRFFCPPP-CIY 360
BLAST of SMED30024849 vs. Ensembl Fly
Match: Su(H) (gene:FBgn0004837 transcript:FBtr0346621) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 266/403 (66.00%), Postives = 327/403 (81.14%), Query Frame = -1 Query: 156 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKC 1364 FFCPPPC+YL G GW + +Q + G QL AF+GIGS+ +Q+M +L+L+ K Y AAKTL+ISDSDKRKHFML VK+F+ NG D+G F SKRIKVISKPSKKKQSLKN DLCIASGT VALFNRLRSQTVSTRYLHVE+ +FHASST+WGAF++HLL D+E E+EEF V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK +L+ADDP+SQLHKCAFY+KDTDRMYLCLSQ+KIIQ+QA P N +E IND ACWTIISTDKAEY++++ +GP PV+PVP+V+ L LNGGGDVAM+EL+G+NF+ +L+VWFGDV A+T YRC+ LLCVVP+I++FR W V++P +VP++LVR+DG++Y+TG+TFTY PEP PR C Sbjct: 140 FFCPPPCIYLFGSGWRRRYEEMLQQGE------GEQGAQLCAFIGIGSS--DQDMQQLDLNG-KQYCAAKTLFISDSDKRKHFMLSVKMFYGNGHDIGVFNSKRIKVISKPSKKKQSLKNADLCIASGTNVALFNRLRSQTVSTRYLHVENGHFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGATVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTDRMYLCLSQEKIIQFQATPCPKEPN-----KEMINDGACWTIISTDKAEYQFYEGMGPVASPVTPVPIVNSLNLNGGGDVAMLELSGDNFTPHLQVWFGDVEAETMYRCTETLLCVVPEISQFRGEWLWVRQPTQVPISLVRNDGIIYATGLTFTYTPEPGPRPHC 528 HSP 2 Score: 63.1586 bits (152), Expect = 2.974e-10 Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 ++LT++ M KY+++ D +++ILHAKVAQKSYGNEKRFF P CI+ Sbjct: 103 KKLTRDAMEKYMRERNDMVIVILHAKVAQKSYGNEKRFFCPPP-CIY 148
BLAST of SMED30024849 vs. Ensembl Fly
Match: Su(H) (gene:FBgn0004837 transcript:FBtr0080700) HSP 1 Score: 568.54 bits (1464), Expect = 0.000e+0 Identity = 266/403 (66.00%), Postives = 327/403 (81.14%), Query Frame = -1 Query: 156 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKC 1364 FFCPPPC+YL G GW + +Q + G QL AF+GIGS+ +Q+M +L+L+ K Y AAKTL+ISDSDKRKHFML VK+F+ NG D+G F SKRIKVISKPSKKKQSLKN DLCIASGT VALFNRLRSQTVSTRYLHVE+ +FHASST+WGAF++HLL D+E E+EEF V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK +L+ADDP+SQLHKCAFY+KDTDRMYLCLSQ+KIIQ+QA P N +E IND ACWTIISTDKAEY++++ +GP PV+PVP+V+ L LNGGGDVAM+EL+G+NF+ +L+VWFGDV A+T YRC+ LLCVVP+I++FR W V++P +VP++LVR+DG++Y+TG+TFTY PEP PR C Sbjct: 140 FFCPPPCIYLFGSGWRRRYEEMLQQGE------GEQGAQLCAFIGIGSS--DQDMQQLDLNG-KQYCAAKTLFISDSDKRKHFMLSVKMFYGNGHDIGVFNSKRIKVISKPSKKKQSLKNADLCIASGTNVALFNRLRSQTVSTRYLHVENGHFHASSTQWGAFTIHLLDDNESESEEFQVRDGYIHYGATVKLVCSVTGMALPRLIIRKVDKQMALLEADDPVSQLHKCAFYMKDTDRMYLCLSQEKIIQFQATPCPKEPN-----KEMINDGACWTIISTDKAEYQFYEGMGPVASPVTPVPIVNSLNLNGGGDVAMLELSGDNFTPHLQVWFGDVEAETMYRCTETLLCVVPEISQFRGEWLWVRQPTQVPISLVRNDGIIYATGLTFTYTPEPGPRPHC 528 HSP 2 Score: 63.1586 bits (152), Expect = 2.974e-10 Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 ++LT++ M KY+++ D +++ILHAKVAQKSYGNEKRFF P CI+ Sbjct: 103 KKLTRDAMEKYMRERNDMVIVILHAKVAQKSYGNEKRFFCPPP-CIY 148
BLAST of SMED30024849 vs. Ensembl Zebrafish
Match: rbpjb (recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]) HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0 Identity = 277/429 (64.57%), Postives = 330/429 (76.92%), Query Frame = -1 Query: 78 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDA 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N EQEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NFS L VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ G + +I+G ++G + Sbjct: 53 FFCPPPCVYLMGCGWKKKREQMERDGCSEQE------SQPCAFIGIG--NSEQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVHTPVTPVPVVESLQLNGGGDVAMLELTGQNFSPTLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTTLTFTYTPEPGPRPHCSAAGAILRTGSASLLSISGNSTGGNG 467 HSP 2 Score: 65.0846 bits (157), Expect = 8.461e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 QRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Zebrafish
Match: rbpja (recombination signal binding protein for immunoglobulin kappa J region a [Source:ZFIN;Acc:ZDB-GENE-031117-1]) HSP 1 Score: 547.74 bits (1410), Expect = 0.000e+0 Identity = 272/410 (66.34%), Postives = 321/410 (78.29%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ + S + +Q AF+GIG N EQEM +LNL+ K++ AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T ++DADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 53 FFCPPPCVYLMGCGWKKKKEQMEREGCSEQE------SQPCAFIGIG--NSEQEMQQLNLEG-KNFCTAKTLYISDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKETN-----KEMINDGASWTIISTDKAEYTFYEGMGPVPSPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEADTMYRCGESVLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTALTFTYTPEPGPRPHCSAAGAIL 448 HSP 2 Score: 65.4698 bits (158), Expect = 7.761e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Zebrafish
Match: rbpjl (recombination signal binding protein for immunoglobulin kappa J region-like [Source:ZFIN;Acc:ZDB-GENE-050307-4]) HSP 1 Score: 416.001 bits (1068), Expect = 1.112e-140 Identity = 201/400 (50.25%), Postives = 283/400 (70.75%), Query Frame = -1 Query: 177 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTN-PEQEMVELNLDSHKD---YSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPE 1364 FFCPPPCVYL G GW+ Q EQ K+ S L + ++ +MG+ S+N P + +L+ + D ++ AKTLYISD+DKRKHF L + +FH GQ++G F S+ IKVISKPS+K+QS+KN DLCI+SG+KV+LFNRLRSQTVSTRYL VED F AS+ +W AF+++L+ + + E+++ E YI YG V+LVC+ +G+ALP +++RKV+K LD D+P+SQLHKCAF + +D MYLCLS +KIIQ+QA P N + ++ND +CWTII T+ EY + ++L +SPVP++S L+LNGGG VAM+EL+GENFS +L VWFG++ A+T +R S LLCVVPD++ W ++P+ VP++L+R DG++Y + +FTY PE Sbjct: 83 FFCPPPCVYLSGHGWKVRQ----EQFKA--SGLNESACRIFGYMGLDSSNDPRTDSFKLSFEEQTDKKMFACAKTLYISDTDKRKHFRLLLHLFHNGGQEIGTFNSRLIKVISKPSQKRQSMKNADLCISSGSKVSLFNRLRSQTVSTRYLAVEDGAFVASARQWTAFTVNLVEETQAVHSEYTMCESYICYGCVVQLVCTDSGVALPPMVIRKVNKQQACLDVDEPVSQLHKCAFQFRGSDHMYLCLSNEKIIQFQASPCPKESN-----KVSLNDGSCWTIIGTEVVEYSFSESLTGHPATISPVPVISGLELNGGGHVAMLELHGENFSPHLRVWFGNMEAETMFRSSRSLLCVVPDVSILSGEWRWTRQPITVPLSLIRLDGLIYRSWFSFTYTPE 471 HSP 2 Score: 56.6102 bits (135), Expect = 4.114e-8 Identity = 26/50 (52.00%), Postives = 38/50 (76.00%), Query Frame = -3 Query: 1336 NTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1485 +++ ++T++ +R+YLQ D + ILHAKVAQKSYGNEKRFF P C++ Sbjct: 43 SSLLKVTRDSVRQYLQFRPDQSVTILHAKVAQKSYGNEKRFFCPPP-CVY 91
BLAST of SMED30024849 vs. Ensembl Zebrafish
Match: rbpjl (recombination signal binding protein for immunoglobulin kappa J region-like [Source:ZFIN;Acc:ZDB-GENE-050307-4]) HSP 1 Score: 395.971 bits (1016), Expect = 4.779e-133 Identity = 197/401 (49.13%), Postives = 277/401 (69.08%), Query Frame = -1 Query: 177 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTN-PEQEMVELNLDSHKD---YSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDL-CIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPE 1364 FFCPPPCVYL G GW+ Q EQ K+ S L + ++ +MG+ S+N P + +L+ + D ++ AKTLYISD+DKRKHF L + +FH GQ++G F S+ IKVISKPS+K+QS+KN+ L C + G+KV+LFNRLRSQTVSTRYL VED F AS+ +W AF+ + + E+++ E YI YG V+LVC+ +G+ALP +++RKV+K LD D+P+SQLHKCAF + +D MYLCLS +KIIQ+QA P N + ++ND +CWTII T+ EY + ++L +SPVP++S L+LNGGG VAM+EL+GENFS +L VWFG++ A+T +R S LLCVVPD++ W ++P+ VP++L+R DG++Y + +FTY PE Sbjct: 74 FFCPPPCVYLSGHGWKVRQ----EQFKA--SGLNESACRIFGYMGLDSSNDPRTDSFKLSFEEQTDKKMFACAKTLYISDTDKRKHFRLLLHLFHNGGQEIGTFNSRLIKVISKPSQKRQSMKNSALMCNSGGSKVSLFNRLRSQTVSTRYLAVEDGAFVASARQWTAFT-----ETQAVHSEYTMCESYICYGCVVQLVCTDSGVALPPMVIRKVNKQQACLDVDEPVSQLHKCAFQFRGSDHMYLCLSNEKIIQFQASPCPKESN-----KVSLNDGSCWTIIGTEVVEYSFSESLTGHPATISPVPVISGLELNGGGHVAMLELHGENFSPHLRVWFGNMEAETMFRSSRSLLCVVPDVSILSGEWRWTRQPITVPLSLIRLDGLIYRSWFSFTYTPE 458 HSP 2 Score: 58.5362 bits (140), Expect = 9.715e-9 Identity = 29/62 (46.77%), Postives = 44/62 (70.97%), Query Frame = -3 Query: 1336 IPEKNNSPENN-NTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1518 +PE N + + +++ ++T++ +R+YLQ D + ILHAKVAQKSYGNEKRFF P C++ Sbjct: 22 LPENCNVEDQSFSSLLKVTRDSVRQYLQFRPDQSVTILHAKVAQKSYGNEKRFFCPPP-CVY 82
BLAST of SMED30024849 vs. Ensembl Xenopus
Match: uqcrc2 (ubiquinol-cytochrome c reductase core protein 2 [Source:Xenbase;Acc:XB-GENE-976155]) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 272/410 (66.34%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 27 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVNAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 422
BLAST of SMED30024849 vs. Ensembl Xenopus
Match: uqcrc2 (ubiquinol-cytochrome c reductase core protein 2 [Source:Xenbase;Acc:XB-GENE-976155]) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 272/410 (66.34%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 1 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVNAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 396
BLAST of SMED30024849 vs. Ensembl Xenopus
Match: uqcrc2 (ubiquinol-cytochrome c reductase core protein 2 [Source:Xenbase;Acc:XB-GENE-976155]) HSP 1 Score: 568.155 bits (1463), Expect = 0.000e+0 Identity = 272/410 (66.34%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 11 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVNAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 406
BLAST of SMED30024849 vs. Ensembl Xenopus
Match: uqcrc2 (ubiquinol-cytochrome c reductase core protein 2 [Source:Xenbase;Acc:XB-GENE-976155]) HSP 1 Score: 510.375 bits (1313), Expect = 3.554e-178 Identity = 252/410 (61.46%), Postives = 305/410 (74.39%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L++N + +++L F N+ + P RC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 35 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVNAPVTPVPVVESLQVN---KMVLLKLKNLCFLPNVVLALSRDPFPC--RCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 425
BLAST of SMED30024849 vs. Ensembl Mouse
Match: Rbpj (recombination signal binding protein for immunoglobulin kappa J region [Source:MGI Symbol;Acc:MGI:96522]) HSP 1 Score: 574.704 bits (1480), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 323/410 (78.78%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P +N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 51 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 446 HSP 2 Score: 65.4698 bits (158), Expect = 7.764e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 14 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 59
BLAST of SMED30024849 vs. Ensembl Mouse
Match: Rbpj (recombination signal binding protein for immunoglobulin kappa J region [Source:MGI Symbol;Acc:MGI:96522]) HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 323/410 (78.78%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P +N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 31 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 426 HSP 2 Score: 56.225 bits (134), Expect = 5.612e-8 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -3 Query: 1336 MRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1455 MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 1 MRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 39
BLAST of SMED30024849 vs. Ensembl Mouse
Match: Rbpj (recombination signal binding protein for immunoglobulin kappa J region [Source:MGI Symbol;Acc:MGI:96522]) HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 323/410 (78.78%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P +N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 53 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 448 HSP 2 Score: 65.4698 bits (158), Expect = 7.268e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Mouse
Match: Rbpj (recombination signal binding protein for immunoglobulin kappa J region [Source:MGI Symbol;Acc:MGI:96522]) HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 323/410 (78.78%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P +N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 92 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 487 HSP 2 Score: 65.4698 bits (158), Expect = 7.431e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 55 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 100
BLAST of SMED30024849 vs. Ensembl Mouse
Match: Rbpj (recombination signal binding protein for immunoglobulin kappa J region [Source:MGI Symbol;Acc:MGI:96522]) HSP 1 Score: 572.778 bits (1475), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 323/410 (78.78%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P +N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 73 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 468 HSP 2 Score: 65.4698 bits (158), Expect = 8.709e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 36 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 81
BLAST of SMED30024849 vs. UniProt/SwissProt
Match: sp|P31266|SUH_MOUSE (Recombining binding protein suppressor of hairless OS=Mus musculus OX=10090 GN=Rbpj PE=1 SV=1) HSP 1 Score: 574.318 bits (1479), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 323/410 (78.78%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P +N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 92 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEQN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 487 HSP 2 Score: 65.4698 bits (158), Expect = 5.198e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 55 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 100
BLAST of SMED30024849 vs. UniProt/SwissProt
Match: sp|Q91880|SUH_XENLA (Suppressor of hairless protein homolog OS=Xenopus laevis OX=8355 GN=rbpj PE=1 SV=1) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 274/410 (66.83%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N EQEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DGV+YST +TFTY PEP PR C A I+ Sbjct: 67 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSEQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPINAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGVIYSTSLTFTYTPEPGPRPHCSAAGAIL 462 HSP 2 Score: 65.855 bits (159), Expect = 4.238e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 30 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 75
BLAST of SMED30024849 vs. UniProt/SwissProt
Match: sp|Q3SZ41|SUH_BOVIN (Recombining binding protein suppressor of hairless OS=Bos taurus OX=9913 GN=RBPJ PE=2 SV=1) HSP 1 Score: 572.007 bits (1473), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 53 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 448 HSP 2 Score: 65.4698 bits (158), Expect = 5.360e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. UniProt/SwissProt
Match: sp|Q5RFK6|SUH_PONAB (Recombining binding protein suppressor of hairless OS=Pongo abelii OX=9601 GN=RBPJ PE=2 SV=1) HSP 1 Score: 571.622 bits (1472), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 52 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 447 HSP 2 Score: 66.6254 bits (161), Expect = 2.555e-10 Identity = 30/47 (63.83%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLTKE MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 15 KRLTKEAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 60
BLAST of SMED30024849 vs. UniProt/SwissProt
Match: sp|Q06330|SUH_HUMAN (Recombining binding protein suppressor of hairless OS=Homo sapiens OX=9606 GN=RBPJ PE=1 SV=3) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 273/410 (66.59%), Postives = 322/410 (78.54%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP + PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 66 FFCPPPCVYLMGSGWKKKKEQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSDDIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFFIHLLDDDESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVLAPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTSLTFTYTPEPGPRPHCSAAGAIL 461 HSP 2 Score: 65.4698 bits (158), Expect = 5.457e-10 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 29 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 74
BLAST of SMED30024849 vs. TrEMBL
Match: A0A4V6RGU8 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_008246 PE=4 SV=1) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 296/465 (63.66%), Postives = 351/465 (75.48%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGW---EDDQNRLSEQSKSPE---------------------------------------SRLGT-DSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQA-------LGPAM-----GPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G+GW D Q +S+ + S E S LGT D+ QL AFMGIG T+ QEMV+LNLD +DYS AKTL+ISDSDKRK+FML +K+F+P+G+D+GQF+S+RIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVED +FHASS++WGAF+++LLADDE EAE+F+VQ+GYIHYGHTVKLVCS TGMALPRLIVRKVDKTTV+LDADDP+SQLHKCAF+LKDTDRMYLCLSQDKI+Q A + D+ N RE INDSA WTIISTD+AEYRWF+ L P+ PV+PVPLV D+++NGGGDVAMVEL GENFS L+VWFGDVPAQT+YRC +LLC VPDI+EF W ++Q+ +EVP++LVR DG++YS+G TFTY PE PR+ C A+ II Sbjct: 635 FFCPPPCVYLRGEGWGITSDKQMSISDGANSGELESASDQRSGHEIPSCSTLPQVSYSCLVPSASGQMSGASSALGTSDAPQLLAFMGIGGTSSPQEMVQLNLDRGRDYSNAKTLFISDSDKRKYFMLMLKMFYPSGRDLGQFHSRRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDASFHASSSRWGAFTINLLADDEGEAEQFTVQDGYIHYGHTVKLVCSETGMALPRLIVRKVDKTTVLLDADDPVSQLHKCAFHLKDTDRMYLCLSQDKIVQLPAAACEDNPN-----REIINDSAAWTIISTDRAEYRWFEPSRLTISDLRPSQLPLITTPVTPVPLVRDMRVNGGGDVAMVELVGENFSPRLQVWFGDVPAQTFYRCEELLLCFVPDISEFFQDWKYIQQALEVPISLVRHDGLIYSSGFTFTYHPESGPRQHCQPALDII 1094 HSP 2 Score: 63.5438 bits (153), Expect = 1.102e-6 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -3 Query: 1336 LTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1470 LT+++M YL D RD IL+ILHAKVAQKSYG EKRFF P C++ Sbjct: 600 LTRQMMTAYLADRRDQILVILHAKVAQKSYGTEKRFFCPPP-CVY 643
BLAST of SMED30024849 vs. TrEMBL
Match: A0A4S2LCG2 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_008246 PE=4 SV=1) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 296/465 (63.66%), Postives = 351/465 (75.48%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGW---EDDQNRLSEQSKSPE---------------------------------------SRLGT-DSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQA-------LGPAM-----GPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G+GW D Q +S+ + S E S LGT D+ QL AFMGIG T+ QEMV+LNLD +DYS AKTL+ISDSDKRK+FML +K+F+P+G+D+GQF+S+RIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVED +FHASS++WGAF+++LLADDE EAE+F+VQ+GYIHYGHTVKLVCS TGMALPRLIVRKVDKTTV+LDADDP+SQLHKCAF+LKDTDRMYLCLSQDKI+Q A + D+ N RE INDSA WTIISTD+AEYRWF+ L P+ PV+PVPLV D+++NGGGDVAMVEL GENFS L+VWFGDVPAQT+YRC +LLC VPDI+EF W ++Q+ +EVP++LVR DG++YS+G TFTY PE PR+ C A+ II Sbjct: 482 FFCPPPCVYLRGEGWGITSDKQMSISDGANSGELESASDQRSGHEIPSCSTLPQVSYSCLVPSASGQMSGASSALGTSDAPQLLAFMGIGGTSSPQEMVQLNLDRGRDYSNAKTLFISDSDKRKYFMLMLKMFYPSGRDLGQFHSRRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDASFHASSSRWGAFTINLLADDEGEAEQFTVQDGYIHYGHTVKLVCSETGMALPRLIVRKVDKTTVLLDADDPVSQLHKCAFHLKDTDRMYLCLSQDKIVQLPAAACEDNPN-----REIINDSAAWTIISTDRAEYRWFEPSRLTISDLRPSQLPLITTPVTPVPLVRDMRVNGGGDVAMVELVGENFSPRLQVWFGDVPAQTFYRCEELLLCFVPDISEFFQDWKYIQQALEVPISLVRHDGLIYSSGFTFTYHPESGPRQHCQPALDII 941 HSP 2 Score: 63.929 bits (154), Expect = 7.207e-7 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -3 Query: 1336 LTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1470 LT+++M YL D RD IL+ILHAKVAQKSYG EKRFF P C++ Sbjct: 447 LTRQMMTAYLADRRDQILVILHAKVAQKSYGTEKRFFCPPP-CVY 490
BLAST of SMED30024849 vs. TrEMBL
Match: G7YE26 (Recombining binding protein suppressor of hairless OS=Clonorchis sinensis OX=79923 GN=CLF_105722 PE=4 SV=1) HSP 1 Score: 600.512 bits (1547), Expect = 0.000e+0 Identity = 296/465 (63.66%), Postives = 353/465 (75.91%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGW---EDDQNRLSEQSKSPE---------------------------------------SRLGT-DSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQA-------LGPAM-----GPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G+GW D Q +S+ + S E S LGT D++QL AFMGIG T+ QEMV+LNLD +DYS AKTL+ISDSDKRK+FML +K+F+P+G+D+GQF+S+RIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVED +FHASS++WGAF+++LLADDE EAE+F+VQ+GYIHYGHTVKLVCS TGMALPRLIVRKVDKTTV+LDADDP+SQLHKCAF+LKDTDRMYLCLSQDKI+Q A + D+ N RE INDSA WTIISTD+AEYRWF+ L P+ PV+PVPLV D+++NGGGDVAMVEL GENFS L+VWFGDVPAQT+YRC +LLC VPDI+EF W ++Q+ +EVP++LVR DG++YS+G+TFTY PE PR+ C A+ II Sbjct: 231 FFCPPPCVYLRGEGWGITSDKQMSISDGANSGELESGSDQRSGHEIPSCSTLPQVSYPCLVPSASGQMSGASSALGTSDASQLLAFMGIGGTSSPQEMVQLNLDRGRDYSNAKTLFISDSDKRKYFMLMLKMFYPSGRDLGQFHSRRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDASFHASSSRWGAFTINLLADDEGEAEQFTVQDGYIHYGHTVKLVCSETGMALPRLIVRKVDKTTVLLDADDPVSQLHKCAFHLKDTDRMYLCLSQDKIVQLPAAACEDNPN-----REIINDSAAWTIISTDRAEYRWFEPSRLTISDLRPSQLPLITTPVTPVPLVRDMRVNGGGDVAMVELVGENFSPRLQVWFGDVPAQTFYRCEELLLCFVPDISEFFQDWKYIQQALEVPISLVRHDGLIYSSGLTFTYHPESGPRQHCQPALDII 690 HSP 2 Score: 64.6994 bits (156), Expect = 3.929e-7 Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -3 Query: 1336 LTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1470 LT+++M YL D RD IL+ILHAKVAQKSYG EKRFF P C++ Sbjct: 196 LTRQMMTAYLADRRDQILVILHAKVAQKSYGTEKRFFCPPP-CVY 239
BLAST of SMED30024849 vs. TrEMBL
Match: A0A075A5K5 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_00485 PE=4 SV=1) HSP 1 Score: 598.586 bits (1542), Expect = 0.000e+0 Identity = 294/465 (63.23%), Postives = 351/465 (75.48%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGW---EDDQNRLSEQSKSPESRLGTD----------------------------------------STQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQA-------LGPAM-----GPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G+GW D Q LS+ + S E G+D ++QL AFMGIG T+ QEMV+LNLD +DYS AKTL+ISDSDKRK+FML +K+F+P+G+D+GQF+S+RIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVED +FHASS++WGAF+++LLADDE EAE+F+VQ+GYIHYGHTVKLVCS TGMALPRLIVRKVDKTTV+LDADDP+SQLHKCAF+LKDTDRMYLCLSQDKI+Q A + D+ N RE INDSA WTIISTD+AEYRWF+ L P+ PV+PVPLV D+++NGGGDVAMVEL GENFS L+VWFGDVPAQT+YRC +LLC VPDI+EF W ++Q+ +EVP++LVR DG++YS+G+TFTY PE PR+ C A+ II Sbjct: 646 FFCPPPCVYLRGEGWGITPDKQMSLSDGANSGELESGSDQRSGHEIPSCSTLPQVSYPCLVPSASGQMSGASSALGSSDASQLLAFMGIGGTSSPQEMVQLNLDRGRDYSNAKTLFISDSDKRKYFMLMLKMFYPSGRDLGQFHSRRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDASFHASSSRWGAFTINLLADDEGEAEQFTVQDGYIHYGHTVKLVCSETGMALPRLIVRKVDKTTVLLDADDPVSQLHKCAFHLKDTDRMYLCLSQDKIVQLPAAACEDNPN-----REIINDSAAWTIISTDRAEYRWFEPSRLTISDLRPSQLPLITTPVTPVPLVRDMRVNGGGDVAMVELVGENFSPRLQVWFGDVPAQTFYRCEELLLCFVPDISEFFQDWKYIQQALEVPISLVRHDGLIYSSGLTFTYHPESGPRQHCQPALDII 1105 HSP 2 Score: 63.1586 bits (152), Expect = 1.381e-6 Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = -3 Query: 1336 LTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1470 LT+++M YL D RD +L+ILHAKVAQKSYG EKRFF P C++ Sbjct: 611 LTRQMMTAYLADRRDQVLVILHAKVAQKSYGTEKRFFCPPP-CVY 654
BLAST of SMED30024849 vs. TrEMBL
Match: A0A5J4P1W3 (Recombining binding protein suppressor of hairless OS=Paragonimus westermani OX=34504 GN=DEA37_0011871 PE=4 SV=1) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 293/462 (63.42%), Postives = 344/462 (74.46%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGW----EDDQNRLSEQSKSPESRLGT-------------------------------------DSTQ-LKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQA----------LGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW E N ++ S E+ +G DS+Q L AFMGIG T QEMV+LN D +DYS AKTL+ISDSDKRK+FML +K+F+PNG+D+GQF+S+RIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVED +FHASS++WGAF+++LLADDE EAE+F+VQ+GYIHYGHTVKLVCS TGMALPRLIVRKVDKTTV+LDADDP+SQLHKCAFYLKDTDRMYLCLSQDKI+Q A D N RE INDSA WTIISTD+AEYRWF+ L P + PV+PVPLV D+++NGGGDVAMVEL GENFS +VWFGDVPAQT+YRC +LLC VPDI+EF W ++Q+ +EVP+++VR DGV+YS+G+TFTY PE PR+ C A+ II Sbjct: 286 FFCPPPCVYLRGDGWSLISEKQLNTGNDSGSSGEADIGAVAVDQRGGQELPSCSSTSQMSYPGPLTSAGGHTNLNVDSSQALLAFMGIGGTTTPQEMVQLNFDRGRDYSNAKTLFISDSDKRKYFMLMLKMFYPNGKDLGQFHSRRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDASFHASSSRWGAFTINLLADDEDEAEQFTVQDGYIHYGHTVKLVCSETGMALPRLIVRKVDKTTVLLDADDPVSQLHKCAFYLKDTDRMYLCLSQDKIVQLPASPCED-----NPTREVINDSAAWTIISTDRAEYRWFEPSRLSINQANQLPPLLIPVTPVPLVRDMRVNGGGDVAMVELVGENFSPRHQVWFGDVPAQTFYRCEELLLCFVPDISEFYRDWTYIQQALEVPISVVRHDGVIYSSGLTFTYHPESGPRQHCQPALDII 742 HSP 2 Score: 67.0106 bits (162), Expect = 6.806e-8 Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = -3 Query: 1336 LTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1470 LT+E+MR YL D RD +L+ILHAKVAQKSYG EKRFF P C++ Sbjct: 251 LTRELMRAYLADRRDQVLVILHAKVAQKSYGTEKRFFCPPP-CVY 294
BLAST of SMED30024849 vs. Ensembl Cavefish
Match: rbpjb (recombination signal binding protein for immunoglobulin kappa J region [Source:NCBI gene;Acc:103031075]) HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0 Identity = 273/426 (64.08%), Postives = 327/426 (76.76%), Query Frame = -1 Query: 87 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSG 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML V++ + N ++G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP V+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ +G +SD + SG Sbjct: 53 FFCPPPCVYLMGCGWKKKREQMERDGCSEQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVRMLYGNSANIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVQSSVTPVPVVESLQLNGGGDVAMLELTGQNFAPNLRVWFGDVEAETMYRCGESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTTLTFTYTPEPGPRPHCSAAGAILRSG--SSDLLATSRSG 462 HSP 2 Score: 65.4698 bits (158), Expect = 5.742e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 QRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Cavefish
Match: rbpja (recombining binding protein suppressor of hairless-like [Source:NCBI gene;Acc:103029567]) HSP 1 Score: 562.762 bits (1449), Expect = 0.000e+0 Identity = 269/410 (65.61%), Postives = 320/410 (78.05%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ + S + Q AF+GIG N EQEM +LNL+ K++ AKTLYISDSDKRKHFML VK+F+ N ++G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRL++RKVDK T ++DADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 53 FFCPPPCVYLMGCGWKKKKEQMEREGCSEQE------AQPCAFIGIG--NSEQEMQQLNLEG-KNFCTAKTLYISDSDKRKHFMLSVKMFYGNSAEIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLVIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKETN-----KEMINDGASWTIISTDKAEYTFYEGMGPVTLPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEADTMYRCGESVLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTALTFTYTPEPGPRPHCSAAGVIL 448 HSP 2 Score: 65.0846 bits (157), Expect = 7.016e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 KRLTREAMRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Cavefish
Match: rbpja (recombining binding protein suppressor of hairless-like [Source:NCBI gene;Acc:103029567]) HSP 1 Score: 562.377 bits (1448), Expect = 0.000e+0 Identity = 269/410 (65.61%), Postives = 320/410 (78.05%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ + ++ + S + Q AF+GIG N EQEM +LNL+ K++ AKTLYISDSDKRKHFML VK+F+ N ++G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRL++RKVDK T ++DADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ Sbjct: 31 FFCPPPCVYLMGCGWKKKKEQMEREGCSEQE------AQPCAFIGIG--NSEQEMQQLNLEG-KNFCTAKTLYISDSDKRKHFMLSVKMFYGNSAEIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLVIRKVDKQTALMDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKETN-----KEMINDGASWTIISTDKAEYTFYEGMGPVTLPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEADTMYRCGESVLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTALTFTYTPEPGPRPHCSAAGVIL 426 HSP 2 Score: 56.225 bits (134), Expect = 5.246e-8 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -3 Query: 1336 MRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1455 MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 1 MRNYLKERGDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 39
BLAST of SMED30024849 vs. Ensembl Cavefish
Match: rbpjl (recombination signal binding protein for immunoglobulin kappa J region-like [Source:ZFIN;Acc:ZDB-GENE-050307-4]) HSP 1 Score: 355.91 bits (912), Expect = 7.014e-118 Identity = 192/424 (45.28%), Postives = 259/424 (61.08%), Query Frame = -1 Query: 105 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGST-NPEQEMVELNLDSHKD---YSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNI 1364 FFCPPPCVYL G GW Q L G S +L +MG+ S+ P+ + +L+ + D ++ AKTLYISD+DKRKHF L + +F GQ++G F S IKVISKPS+K+QS+KN DLCI+SG++V+LFNRLRSQTVSTRYL VE F AS+ +W AF++ +LAD ++SV + YI YG V+LVC+ +G+ALP +++RKV+K V LD D+P+SQLHKCAF +D+ MYLCLS +KI+QYQA P S RE +ND GG VAM+EL+GENFS +L+VWFG++ A T +R LLCVVPDI+ F W +++PV VP++L+R DG++Y + TFTY PE + + I + VPNSD + Sbjct: 85 FFCPPPCVYLCGTGWNLRQEHLKGH--------GESSCRLCGYMGLDSSPGPQTDSFKLSFEEQTDKRMFACAKTLYISDTDKRKHFRLMLHLFQSGGQEIGSFQSGLIKVISKPSQKRQSMKNADLCISSGSRVSLFNRLRSQTVSTRYLAVEGGAFVASARQWTAFTV-ILADH----GDYSVCDSYICYGCVVQLVCTNSGVALPPMVIRKVNKQHVCLDVDEPVSQLHKCAFQFRDSKHMYLCLSNEKILQYQASPCPK-----ESSRELLND----------------------------------------GGHVAMLELHGENFSPHLKVWFGNMEADTMFRSPRSLLCVVPDISVFSGEWRSLRQPVTVPLSLIRMDGLIYRSSFTFTYTPEHSATSQLCTTI----DRVPNSDML 446
BLAST of SMED30024849 vs. Ensembl Nematostella
Match: EDO41470 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S478]) HSP 1 Score: 531.176 bits (1367), Expect = 0.000e+0 Identity = 267/400 (66.75%), Postives = 317/400 (79.25%), Query Frame = -1 Query: 165 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPR 1364 FFCPPPCVYL G+GW + Q RL +Q+ + ++ Q AF+GIG+++ EQEM +L ++ K Y AAKTL+ISDSDKRKHF L VK+ +PNG VG F SKRIKVISKPSKKKQSLKN DLCI SG+ VALFNRLRSQTVSTRYLHVE+ NFHASS +WGAF++HLL D+E E+EEF+V+EGYIHYG TVKLVCSVTGMALPRLIVRKVDK T +LDADDP+SQLHK AFY+KDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAE +++ +GP PV+PVP VS L+LNGGGDVAM+EL GENF+ NL+VWFGDV A+T YRC LLCVVPDI+ R W V++P EV V+LVR DGV+Y TG+TFTY PEP R Sbjct: 35 FFCPPPCVYLFGEGWRNRQ-RLLQQAGEDDG----NNQQPVAFIGIGNSS-EQEMQQLIIE-EKGYGAAKTLFISDSDKRKHFELSVKLLYPNGDHVGIFNSKRIKVISKPSKKKQSLKNADLCIQSGSTVALFNRLRSQTVSTRYLHVENGNFHASSQQWGAFTIHLLDDEESESEEFTVREGYIHYGSTVKLVCSVTGMALPRLIVRKVDKQTSLLDADDPVSQLHKVAFYMKDTERMYLCLSQERIIQFQATPCPKESN-----KEMINDGASWTIISTDKAECNFYEGMGPVRSPVTPVPFVSHLQLNGGGDVAMLELTGENFTANLKVWFGDVEAETMYRCGESLLCVVPDISAIRGGWRFVRQPTEVAVSLVRCDGVIYPTGLTFTYTPEPVER 422
BLAST of SMED30024849 vs. Ensembl Medaka
Match: rbpjb (recombination signal binding protein for immunoglobulin kappa J region [Source:NCBI gene;Acc:101167243]) HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0 Identity = 276/422 (65.40%), Postives = 328/422 (77.73%), Query Frame = -1 Query: 99 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITG 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ G NS ++G Sbjct: 53 FFCPPPCVYLMGSGWKKKKEQMERDGCSDQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTTLTFTYTPEPGPRPHCSAAGAILRAG--NSSLLSG 458 HSP 2 Score: 65.0846 bits (157), Expect = 7.515e-11 Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = -3 Query: 1336 RRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1476 +RLT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 16 QRLTREAMRNYLKERGDQTVMILHAKVAQKSYGNEKRFFCPPP-CVY 61
BLAST of SMED30024849 vs. Ensembl Medaka
Match: rbpjb (recombination signal binding protein for immunoglobulin kappa J region [Source:NCBI gene;Acc:101167243]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 276/422 (65.40%), Postives = 328/422 (77.73%), Query Frame = -1 Query: 99 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITG 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ G NS ++G Sbjct: 31 FFCPPPCVYLMGSGWKKKKEQMERDGCSDQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTTLTFTYTPEPGPRPHCSAAGAILRAG--NSSLLSG 436 HSP 2 Score: 56.225 bits (134), Expect = 5.038e-8 Identity = 25/40 (62.50%), Postives = 31/40 (77.50%), Query Frame = -3 Query: 1336 MRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1455 MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 1 MRNYLKERGDQTVMILHAKVAQKSYGNEKRFFCPPP-CVY 39
BLAST of SMED30024849 vs. Ensembl Medaka
Match: rbpjb (recombination signal binding protein for immunoglobulin kappa J region [Source:NCBI gene;Acc:101167243]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 276/422 (65.40%), Postives = 328/422 (77.73%), Query Frame = -1 Query: 99 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITG 1364 FFCPPPCVYL G GW+ + ++ S + +Q AF+GIG N +QEM +LNL+ K+Y AKTLYISDSDKRKHFML VK+F+ N D+G F SKRIKVISKPSKKKQSLKN DLCIASGTKVALFNRLRSQTVSTRYLHVE NFHASS +WGAF +HLL D+E E EEF+V++GYIHYG TVKLVCSVTGMALPRLI+RKVDK T +LDADDP+SQLHKCAFYLKDT+RMYLCLSQ++IIQ+QA P N +E IND A WTIISTDKAEY +++ +GP PV+PVP+V L+LNGGGDVAM+EL G+NF+ NL VWFGDV A+T YRC+ +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP PR C A I+ G NS ++G Sbjct: 43 FFCPPPCVYLMGSGWKKKKEQMERDGCSDQE------SQPCAFIGIG--NSDQEMQQLNLEG-KNYCTAKTLYISDSDKRKHFMLSVKMFYGNSADIGVFLSKRIKVISKPSKKKQSLKNADLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFHASSQQWGAFYIHLLDDEESEGEEFTVRDGYIHYGQTVKLVCSVTGMALPRLIIRKVDKQTALLDADDPVSQLHKCAFYLKDTERMYLCLSQERIIQFQATPCPKEPN-----KEMINDGASWTIISTDKAEYTFYEGMGPVHSPVTPVPVVESLQLNGGGDVAMLELTGQNFTPNLRVWFGDVEAETMYRCAESMLCVVPDISAFREGWRWVRQPVQVPVTLVRNDGIIYSTTLTFTYTPEPGPRPHCSAAGAILRAG--NSSLLSG 448 HSP 2 Score: 58.5362 bits (140), Expect = 9.504e-9 Identity = 26/42 (61.90%), Postives = 32/42 (76.19%), Query Frame = -3 Query: 1336 EVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1461 E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 11 EAMRNYLKERGDQTVMILHAKVAQKSYGNEKRFFCPPP-CVY 51
BLAST of SMED30024849 vs. Ensembl Medaka
Match: hgsnat (heparan-alpha-glucosaminide N-acetyltransferase [Source:NCBI gene;Acc:101166687]) HSP 1 Score: 532.332 bits (1370), Expect = 0.000e+0 Identity = 257/410 (62.68%), Postives = 309/410 (75.37%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ +++ + + Q AF+GIG N +M +L+L+ K + AKTLYISDSDKRKHFML VK+ + ++G F SKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVE NF ASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCS+TGMALPRL++RKVDK +L+ADDP+SQLHKCAFYLKDTDRMYLCLSQ++IIQ+QA N +E ++D A WTIISTDKAEY + + +GP PV+PVP+V L+LNGGGDVAM+EL G NF+ L VWFGDV A T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP P+ C A I+ Sbjct: 40 FFCPPPCVYLMGAGWKKKLEKMANDGCTEQE------AQPFAFIGIG--NSVLDMQQLHLEG-KHFCMAKTLYISDSDKRKHFMLSVKMLYGTSSNIGVFLSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFCASSQQWGAFYIHLLEDDESEGEEFAVRDGYIHYGKTVKLVCSITGMALPRLVIRKVDKQAALLNADDPVSQLHKCAFYLKDTDRMYLCLSQERIIQFQAAPCSKEAN-----KELVSDGASWTIISTDKAEYTFCEGMGPVQTPVTPVPVVETLQLNGGGDVAMLELTGHNFTPTLRVWFGDVEADTMYRCGESILCVVPDISSFREGWRWVRQPVQVPVTLVRNDGIIYSTALTFTYTPEPGPQPHCSAAGAIL 435 HSP 2 Score: 61.2326 bits (147), Expect = 1.073e-9 Identity = 27/45 (60.00%), Postives = 34/45 (75.56%), Query Frame = -3 Query: 1336 LTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1470 +T E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 5 VTGEAMRSYLKEKEDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 48
BLAST of SMED30024849 vs. Ensembl Medaka
Match: hgsnat (heparan-alpha-glucosaminide N-acetyltransferase [Source:NCBI gene;Acc:101166687]) HSP 1 Score: 531.561 bits (1368), Expect = 0.000e+0 Identity = 257/410 (62.68%), Postives = 309/410 (75.37%), Query Frame = -1 Query: 135 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQII 1364 FFCPPPCVYL G GW+ +++ + + Q AF+GIG N +M +L+L+ K + AKTLYISDSDKRKHFML VK+ + ++G F SKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVE NF ASS +WGAF +HLL DDE E EEF+V++GYIHYG TVKLVCS+TGMALPRL++RKVDK +L+ADDP+SQLHKCAFYLKDTDRMYLCLSQ++IIQ+QA N +E ++D A WTIISTDKAEY + + +GP PV+PVP+V L+LNGGGDVAM+EL G NF+ L VWFGDV A T YRC +LCVVPDI+ FR W V++PV+VPV LVR+DG++YST +TFTY PEP P+ C A I+ Sbjct: 78 FFCPPPCVYLMGAGWKKKLEKMANDGCTEQE------AQPFAFIGIG--NSVLDMQQLHLEG-KHFCMAKTLYISDSDKRKHFMLSVKMLYGTSSNIGVFLSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEGGNFCASSQQWGAFYIHLLEDDESEGEEFAVRDGYIHYGKTVKLVCSITGMALPRLVIRKVDKQAALLNADDPVSQLHKCAFYLKDTDRMYLCLSQERIIQFQAAPCSKEAN-----KELVSDGASWTIISTDKAEYTFCEGMGPVQTPVTPVPVVETLQLNGGGDVAMLELTGHNFTPTLRVWFGDVEADTMYRCGESILCVVPDISSFREGWRWVRQPVQVPVTLVRNDGIIYSTALTFTYTPEPGPQPHCSAAGAIL 473 HSP 2 Score: 65.0846 bits (157), Expect = 7.501e-11 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = -3 Query: 1336 LFVIPEKNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1527 +F K + P N + LT+E MR YL++ D ++ILHAKVAQKSYGNEKRFF P C++ Sbjct: 27 MFCFGRKFDEP---NPPQHLTREAMRSYLKEKEDQTVLILHAKVAQKSYGNEKRFFCPPP-CVY 86
BLAST of SMED30024849 vs. Planmine SMEST
Match: SMESG000027221.1 (SMESG000027221.1) HSP 1 Score: 922.154 bits (2382), Expect = 0.000e+0 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = -1 Query: 60 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDAACSINS 1364 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDAACSINS Sbjct: 300 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDAACSINS 734 HSP 2 Score: 112.464 bits (280), Expect = 6.324e-26 Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = -3 Query: 1336 PEKNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1515 P KNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFF P C++ Sbjct: 250 PRKNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFCPPP-CVY 308
BLAST of SMED30024849 vs. Planmine SMEST
Match: SMESG000027221.1 (SMESG000027221.1) HSP 1 Score: 919.072 bits (2374), Expect = 0.000e+0 Identity = 435/435 (100.00%), Postives = 435/435 (100.00%), Query Frame = -1 Query: 60 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDAACSINS 1364 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDAACSINS Sbjct: 155 FFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDSTQLKAFMGIGSTNPEQEMVELNLDSHKDYSAAKTLYISDSDKRKHFMLHVKIFHPNGQDVGQFYSKRIKVISKPSKKKQSLKNTDLCIASGTKVALFNRLRSQTVSTRYLHVEDKNFHASSTKWGAFSMHLLADDEVEAEEFSVQEGYIHYGHTVKLVCSVTGMALPRLIVRKVDKTTVILDADDPISQLHKCAFYLKDTDRMYLCLSQDKIIQYQAVSRPDHENGGNSMREAINDSACWTIISTDKAEYRWFQALGPAMGPVSPVPLVSDLKLNGGGDVAMVELNGENFSTNLEVWFGDVPAQTYYRCSNVLLCVVPDINEFRTAWDHVQEPVEVPVNLVRSDGVVYSTGMTFTYRPEPAPRKKCVEAIQIICNGVPNSDNITGPTSGSDAACSINS 589 HSP 2 Score: 112.849 bits (281), Expect = 3.243e-26 Identity = 53/60 (88.33%), Postives = 55/60 (91.67%), Query Frame = -3 Query: 1336 PEKNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFLSPTVCIF 1515 P KNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFF P C++ Sbjct: 105 PRKNNSPENNNTIRRLTKEVMRKYLQDPRDHILIILHAKVAQKSYGNEKRFFCPPP-CVY 163 The following BLAST results are available for this feature:
BLAST of SMED30024849 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of SMED30024849 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 4
BLAST of SMED30024849 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 2
BLAST of SMED30024849 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 4
BLAST of SMED30024849 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 4
BLAST of SMED30024849 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of SMED30024849 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of SMED30024849 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30024849 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of SMED30024849 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30024849 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30024849 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 1
BLAST of SMED30024849 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of SMED30024849 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 2
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024849 ID=SMED30024849|Name=SMED30024849|organism=Schmidtea mediterranea sexual|type=transcript|length=1544bpback to top protein sequence of SMED30024849-orf-1 >SMED30024849-orf-1 ID=SMED30024849-orf-1|Name=SMED30024849-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=450bp MPKLLKNPMEMKNDFFCPPPCVYLHGKGWEDDQNRLSEQSKSPESRLGTDback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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