degenerin deg-1-like

Overview


Name	degenerin deg-1-like
Smed ID	SMED30024734
Length (bp)	560

Neoblast Clusters

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30024734

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
nervous system	SMED30024734	h1SMcG0005029	dd_Smed_v4_26469_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30024734	h1SMcG0005029	dd_Smed_v4_26469_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30024734	h1SMcG0005029	dd_Smed_v4_26469_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of degenerin deg-1-like vs. Ensembl Human
Match: SCNN1G (sodium channel epithelial 1 gamma subunit [Source:HGNC Symbol;Acc:HGNC:10602])

HSP 1 Score: 83.9593 bits (206), Expect = 1.646e-18
Identity = 47/153 (30.72%), Postives = 80/153 (52.29%), Query Frame = 1

Query:   52 DLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNS-GIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKC 507
            D +     +F  F++  +GNC+TFN   N++ L T   G +YG+++ L+I+   Y P   +S G +V+IH   EYPF EDVG       + S+G+ LT +  L  P++ C    +         +  + NA+Y+ + C+ +C Q  ++  C C
Sbjct:  263 DGVSCDARNFTLFHHPMHGNCYTFNNRENETILSTSMGGSEYGLQVILYINEEEYNPFLVSSTGAKVIIHRQDEYPFVEDVGTEIETAMVTSIGMHLTESFKLSEPYSQCTEDGS------DVPIRNIYNAAYSLQICLHSCFQTKMVEKCGC 409

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BLAST of degenerin deg-1-like vs. Ensembl Human
Match: SCNN1B (sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600])

HSP 1 Score: 78.5666 bits (192), Expect = 9.598e-17
Identity = 43/153 (28.10%), Postives = 77/153 (50.33%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQ--LSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            +F   +   YGNC+ FN    + +L +   G ++G+K+ L I    Y+P +   +G+R+++H    YPF  D GI A+ G   S+G+ +     +  P++ C    +   +Q   S Y     N +Y+ + C+++C Q  ++  C C H  YP
Sbjct:  233 NFTSIFYPHYGNCYIFNWGMTEKALPSANPGTEFGLKLILDIGQEDYVPFLASTAGVRLMLHEQRSYPFIRDEGIYAMSGTETSIGVLVDKLQRMGEPYSPCTVNGSEVPVQNFYSDY-----NTTYSIQACLRSCFQDHMIRNCNCGHYLYP 380

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Human
Match: SCNN1B (sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600])

HSP 1 Score: 78.5666 bits (192), Expect = 9.791e-17
Identity = 43/153 (28.10%), Postives = 77/153 (50.33%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQ--LSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            +F   +   YGNC+ FN    + +L +   G ++G+K+ L I    Y+P +   +G+R+++H    YPF  D GI A+ G   S+G+ +     +  P++ C    +   +Q   S Y     N +Y+ + C+++C Q  ++  C C H  YP
Sbjct:  260 NFTSIFYPHYGNCYIFNWGMTEKALPSANPGTEFGLKLILDIGQEDYVPFLASTAGVRLMLHEQRSYPFIRDEGIYAMSGTETSIGVLVDKLQRMGEPYSPCTVNGSEVPVQNFYSDY-----NTTYSIQACLRSCFQDHMIRNCNCGHYLYP 407

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Human
Match: SCNN1B (sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600])

HSP 1 Score: 78.5666 bits (192), Expect = 1.004e-16
Identity = 43/153 (28.10%), Postives = 77/153 (50.33%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQ--LSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            +F   +   YGNC+ FN    + +L +   G ++G+K+ L I    Y+P +   +G+R+++H    YPF  D GI A+ G   S+G+ +     +  P++ C    +   +Q   S Y     N +Y+ + C+++C Q  ++  C C H  YP
Sbjct:  305 NFTSIFYPHYGNCYIFNWGMTEKALPSANPGTEFGLKLILDIGQEDYVPFLASTAGVRLMLHEQRSYPFIRDEGIYAMSGTETSIGVLVDKLQRMGEPYSPCTVNGSEVPVQNFYSDY-----NTTYSIQACLRSCFQDHMIRNCNCGHYLYP 452

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BLAST of degenerin deg-1-like vs. Ensembl Human
Match: ASIC4 (acid sensing ion channel subunit family member 4 [Source:HGNC Symbol;Acc:HGNC:21263])

HSP 1 Score: 73.9442 bits (180), Expect = 4.522e-15
Identity = 49/165 (29.70%), Postives = 74/165 (44.85%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            S ++F   Y  +YG C+TFN  + +SSL +   G   G+++ L I    Y+PI       +F +GIRV IH   E P+   +G G  PG    V         LP P  NC+  + L   +L  Y      ++Y+   C   C ++ +L  C C     P N  +
Sbjct:  315 SASNFSVVYT-RYGKCYTFN-ADPRSSLPSRAGGMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQEEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRAESELREPELQGY------SAYSVSACRLRCEKEAVLQRCHCRMVHMPGNETI 471

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BLAST of degenerin deg-1-like vs. Ensembl Celegans
Match: mec-4 (Degenerin mec-4 [Source:UniProtKB/Swiss-Prot;Acc:P24612])

HSP 1 Score: 102.449 bits (254), Expect = 2.166e-25
Identity = 52/155 (33.55%), Postives = 86/155 (55.48%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSN 537
             DF    +  +G+CFTFN  N   +L ++  GP YG++M +++++S Y+P T  +G+R+ IH   ++PFP+  G  A  G ++S GL L     LP P+ +C     +   + S Y+    N  Y+ EGC ++C Q+ +L  C+C  P +P   N
Sbjct:  461 ADFLTHIDPAFGSCFTFN-HNRTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGDC-----VPDGKTSDYI--YSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPVPEN 607

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Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSN 537
             DF    +  +G+CFTFN  N   +L ++  GP YG++M +++++S Y+P T  +G+R+ IH   ++PFP+  G  A  G ++S GL L     LP P+ +C     +   + S Y+    N  Y+ EGC ++C Q+ +L  C+C  P +P   N
Sbjct:  461 ADFLTHIDPAFGSCFTFN-HNRTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGDC-----VPDGKTSDYI--YSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPVPEN 607

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BLAST of degenerin deg-1-like vs. Ensembl Celegans
Match: del-1 (Degenerin del-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19038])

HSP 1 Score: 100.908 bits (250), Expect = 7.195e-25
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            T+F    +  +GNC+TFN  N +  L +   GP YG+++ +F++SS Y+P T  +G+R+ IH   E PFP+  G  A  G ++S G+ L     LP P+ NC  +        S Y G      Y  EGC ++C Q  I+  C C  P YP
Sbjct:  382 TEFKLHIDPSFGNCYTFN-ANPEKKLASSRAGPSYGLRLMMFVNSSDYLPTTEATGVRIAIHGKEECPFPDTFGYSAPTGVISSFGISLRNINRLPQPYGNC--LQKDNPQSRSIYKGY----KYEPEGCFRSCYQYRIIAKCGCADPRYP 525

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Celegans
Match: del-1 (Degenerin del-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19038])

HSP 1 Score: 100.908 bits (250), Expect = 7.743e-25
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            T+F    +  +GNC+TFN  N +  L +   GP YG+++ +F++SS Y+P T  +G+R+ IH   E PFP+  G  A  G ++S G+ L     LP P+ NC  +        S Y G      Y  EGC ++C Q  I+  C C  P YP
Sbjct:  337 TEFKLHIDPSFGNCYTFN-ANPEKKLASSRAGPSYGLRLMMFVNSSDYLPTTEATGVRIAIHGKEECPFPDTFGYSAPTGVISSFGISLRNINRLPQPYGNC--LQKDNPQSRSIYKGY----KYEPEGCFRSCYQYRIIAKCGCADPRYP 480

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Celegans
Match: del-1 (Degenerin del-1 [Source:UniProtKB/Swiss-Prot;Acc:Q19038])

HSP 1 Score: 100.908 bits (250), Expect = 8.221e-25
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            T+F    +  +GNC+TFN  N +  L +   GP YG+++ +F++SS Y+P T  +G+R+ IH   E PFP+  G  A  G ++S G+ L     LP P+ NC  +        S Y G      Y  EGC ++C Q  I+  C C  P YP
Sbjct:  357 TEFKLHIDPSFGNCYTFN-ANPEKKLASSRAGPSYGLRLMMFVNSSDYLPTTEATGVRIAIHGKEECPFPDTFGYSAPTGVISSFGISLRNINRLPQPYGNC--LQKDNPQSRSIYKGY----KYEPEGCFRSCYQYRIIAKCGCADPRYP 500

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Zebrafish
Match: asic4a (acid-sensing (proton-gated) ion channel family member 4a [Source:NCBI gene;Acc:407668])

HSP 1 Score: 66.2402 bits (160), Expect = 1.378e-12
Identity = 52/171 (30.41%), Postives = 75/171 (43.86%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            S  DF   Y  +YG C+TFN  N  +S +T + G   G+++ L I    Y+PI       +  +GIRV IH   E P+   +G G  PG    V         LP P  NC+  +T E M +  Y       +Y+   C   C    +L  CKC     P ++N+    +I
Sbjct:  186 SAEDFTVVYT-RYGKCYTFN-GNKTTSRKTKQGGMGNGLEIMLDIQQDDYLPIWKETNETSLEAGIRVQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCR--STSEQM-IPGY------DTYSISACRLRCETLEVLRECKCRMVHMPGDANICTPSDI 345

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Zebrafish
Match: asic4a (acid-sensing (proton-gated) ion channel family member 4a [Source:NCBI gene;Acc:407668])

HSP 1 Score: 64.6994 bits (156), Expect = 3.235e-12
Identity = 48/160 (30.00%), Postives = 71/160 (44.38%), Query Frame = 1

Query:  100 QYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            +YG C+TFN  N  +S +T + G   G+++ L I    Y+PI       +  +GIRV IH   E P+   +G G  PG    V         LP P  NC+  +T E M +  Y       +Y+   C   C    +L  CKC     P ++N+    +I
Sbjct:    4 RYGKCYTFN-GNKTTSRKTKQGGMGNGLEIMLDIQQDDYLPIWKETNETSLEAGIRVQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCR--STSEQM-IPGY------DTYSISACRLRCETLEVLRECKCRMVHMPGDANICTPSDI 153

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BLAST of degenerin deg-1-like vs. Ensembl Zebrafish
Match: asic1c (acid-sensing (proton-gated) ion channel 1c [Source:NCBI gene;Acc:407670])

HSP 1 Score: 62.3882 bits (150), Expect = 2.218e-11
Identity = 44/155 (28.39%), Postives = 70/155 (45.16%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V IH   E PF + +G G  PG    V       L LP P  +C++     A   S Y      ++Y+   C   C  +++L  C C     P  S +
Sbjct:  192 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGDTDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLLYLPPPWGDCRS-----APMDSEYF-----STYSITACRIDCETRYLLENCNCRMVHMPGTSTV 336

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BLAST of degenerin deg-1-like vs. Ensembl Zebrafish
Match: asic2 (acid-sensing (proton-gated) ion channel 2 [Source:NCBI gene;Acc:407669])

HSP 1 Score: 60.8474 bits (146), Expect = 9.535e-11
Identity = 44/164 (26.83%), Postives = 68/164 (41.46%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQT-LETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNS 534
            S  DF   +  +YG C+ FN      +L+T ++ G   G+++ L I    Y+P+        F +G+RV IH   E PF  ++G G  PG    V         LP P   C        +  +   GL     Y+   C   C  ++I+  C C   + P +S
Sbjct:  200 SHQDFKTVFT-RYGKCYMFNAAEEGKTLRTTMKGGTGNGLEIMLDIQQDEYLPVWGETEETAFEAGVRVQIHSQAEPPFVHELGFGVAPGFQTFVATQEQRLTYLPPPWGEC--------VSRALDSGLF--QVYSVSACRIECETRYIVENCNCRMVYMPGDS 352

[Close]

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQT-LETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNS 534
            S  DF   +  +YG C+ FN      +L+T ++ G   G+++ L I    Y+P+        F +G+RV IH   E PF  ++G G  PG    V         LP P   C        +  +   GL     Y+   C   C  ++I+  C C   + P +S
Sbjct:  200 SHQDFKTVFT-RYGKCYMFNAAEEGKTLRTTMKGGTGNGLEIMLDIQQDEYLPVWGETEETAFEAGVRVQIHSQAEPPFVHELGFGVAPGFQTFVATQEQRLTYLPPPWGEC--------VSRALDSGLF--QVYSVSACRIECETRYIVENCNCRMVYMPGDS 352

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BLAST of degenerin deg-1-like vs. Ensembl Xenopus
Match: cdh12 (cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase;Acc:XB-GENE-982876])

HSP 1 Score: 85.1149 bits (209), Expect = 5.036e-19
Identity = 52/172 (30.23%), Postives = 88/172 (51.16%), Query Frame = 1

Query:    1 ILTCFMFIILMEFWNSMDLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYH 513
            I+TCF            D +     +F  F++  YGNC+TFN     + L +   G +YG+K+ L+ID   Y P ++  +G ++L+H   EYPF ED+G         S+G+ LT +  L  P+++C    T++   +S  V  + +  YT + C+ +C Q+ ++  C C H
Sbjct:  258 IVTCFF-----------DGLSCDARNFTLFHHPLYGNCYTFNSAERGNLLVSSMGGAEYGLKVVLYIDEDEYNPYLSTAAGAKILVHDQDEYPFIEDLGTELETATETSIGMQLTESTKLSDPYSDC----TMDGSDVS--VENLYSKKYTLQICLNSCFQREMVRTCGCAH 412

[Close]

Query:    1 ILTCFMFIILMEFWNSMDLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYH 513
            I+TCF            D +     +F  F++  YGNC+TFN     + L +   G +YG+K+ L+ID   Y P ++  +G ++L+H   EYPF ED+G         S+G+ LT +  L  P+++C    T++   +S  V  + +  YT + C+ +C Q+ ++  C C H
Sbjct:  268 IVTCFF-----------DGLSCDARNFTLFHHPLYGNCYTFNSAERGNLLVSSMGGAEYGLKVVLYIDEDEYNPYLSTAAGAKILVHDQDEYPFIEDLGTELETATETSIGMQLTESTKLSDPYSDC----TMDGSDVS--VENLYSKKYTLQICLNSCFQREMVRTCGCAH 422

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Xenopus
Match: cdh12 (cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase;Acc:XB-GENE-982876])

HSP 1 Score: 85.1149 bits (209), Expect = 5.687e-19
Identity = 52/172 (30.23%), Postives = 88/172 (51.16%), Query Frame = 1

Query:    1 ILTCFMFIILMEFWNSMDLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYH 513
            I+TCF            D +     +F  F++  YGNC+TFN     + L +   G +YG+K+ L+ID   Y P ++  +G ++L+H   EYPF ED+G         S+G+ LT +  L  P+++C    T++   +S  V  + +  YT + C+ +C Q+ ++  C C H
Sbjct:  260 IVTCFF-----------DGLSCDARNFTLFHHPLYGNCYTFNSAERGNLLVSSMGGAEYGLKVVLYIDEDEYNPYLSTAAGAKILVHDQDEYPFIEDLGTELETATETSIGMQLTESTKLSDPYSDC----TMDGSDVS--VENLYSKKYTLQICLNSCFQREMVRTCGCAH 414

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Xenopus
Match: cdh12 (cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase;Acc:XB-GENE-982876])

HSP 1 Score: 85.1149 bits (209), Expect = 5.920e-19
Identity = 52/172 (30.23%), Postives = 88/172 (51.16%), Query Frame = 1

Query:    1 ILTCFMFIILMEFWNSMDLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYH 513
            I+TCF            D +     +F  F++  YGNC+TFN     + L +   G +YG+K+ L+ID   Y P ++  +G ++L+H   EYPF ED+G         S+G+ LT +  L  P+++C    T++   +S  V  + +  YT + C+ +C Q+ ++  C C H
Sbjct:  258 IVTCFF-----------DGLSCDARNFTLFHHPLYGNCYTFNSAERGNLLVSSMGGAEYGLKVVLYIDEDEYNPYLSTAAGAKILVHDQDEYPFIEDLGTELETATETSIGMQLTESTKLSDPYSDC----TMDGSDVS--VENLYSKKYTLQICLNSCFQREMVRTCGCAH 412

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Xenopus
Match: cdh12 (cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase;Acc:XB-GENE-982876])

HSP 1 Score: 84.7297 bits (208), Expect = 6.481e-19
Identity = 52/172 (30.23%), Postives = 88/172 (51.16%), Query Frame = 1

Query:    1 ILTCFMFIILMEFWNSMDLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYH 513
            I+TCF            D +     +F  F++  YGNC+TFN     + L +   G +YG+K+ L+ID   Y P ++  +G ++L+H   EYPF ED+G         S+G+ LT +  L  P+++C    T++   +S  V  + +  YT + C+ +C Q+ ++  C C H
Sbjct:  258 IVTCFF-----------DGLSCDARNFTLFHHPLYGNCYTFNSAERGNLLVSSMGGAEYGLKVVLYIDEDEYNPYLSTAAGAKILVHDQDEYPFIEDLGTELETATETSIGMQLTESTKLSDPYSDC----TMDGSDVS--VENLYSKKYTLQICLNSCFQREMVRTCGCAH 412

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Mouse
Match: Scnn1g (sodium channel, nonvoltage-gated 1 gamma [Source:MGI Symbol;Acc:MGI:104695])

HSP 1 Score: 82.0333 bits (201), Expect = 4.922e-18
Identity = 49/153 (32.03%), Postives = 78/153 (50.98%), Query Frame = 1

Query:   52 DLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNS-GIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKC 507
            D +     +F  F++  YGNC+TFN   N + L T   G +YG+++ L+I+   Y P   +S G +VL+H   EYPF EDVG         S+G+ LT +  L  P++ C    +         V  + NA+Y+ + C+ +C Q  ++  C C
Sbjct:  269 DGMSCDARNFTLFHHPMYGNCYTFNNRENATILSTSMGGSEYGLQVILYINEDEYNPFLVSSTGAKVLVHQQNEYPFIEDVGTEIETAMSTSIGMHLTESFKLSEPYSQCTEDGS------DVPVTNIYNAAYSLQICLYSCFQTKMVEKCGC 415

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Mouse
Match: Scnn1b (sodium channel, nonvoltage-gated 1 beta [Source:MGI Symbol;Acc:MGI:104696])

HSP 1 Score: 72.7886 bits (177), Expect = 7.205e-15
Identity = 42/145 (28.97%), Postives = 72/145 (49.66%), Query Frame = 1

Query:  100 QYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCK-NMTTLEAMQL-SAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
             YGNC+ FN    + +L +   G ++G+K+ L I    Y+P +   +G R+++H    YPF  + GI A+ G   S+G+ +        P++ C  N + +    L S Y     N +Y+ + C+ +C Q  ++  C C H  YP
Sbjct:  266 DYGNCYIFNWGMTEETLPSANPGTEFGLKLILDIGQEDYVPFLASTAGARLMLHEQRTYPFIREEGIYAMAGTETSIGVLVDKLQRKGEPYSPCTMNGSDVAIKNLYSVY-----NTTYSIQACLHSCFQDHMIRNCSCGHYLYP 405

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Mouse
Match: Asic4 (acid-sensing (proton-gated) ion channel family member 4 [Source:MGI Symbol;Acc:MGI:2652846])

HSP 1 Score: 72.7886 bits (177), Expect = 7.966e-15
Identity = 49/165 (29.70%), Postives = 74/165 (44.85%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            S ++F   Y  +YG C+TFN  + +SSL +   G   G+++ L I    Y+PI       +F +GIRV IH   E P+   +G G  PG    V         LP P  NC+  + L   +L  Y      ++Y+   C   C ++ +L  C C     P N  +
Sbjct:  188 SASNFSVVYT-RYGKCYTFN-ADPQSSLPSRAGGMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQEEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRAESELREPELQGY------SAYSVSACRLRCEKEAVLQRCHCRMVHMPGNETI 344

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Mouse
Match: Scnn1b (sodium channel, nonvoltage-gated 1 beta [Source:MGI Symbol;Acc:MGI:104696])

HSP 1 Score: 72.7886 bits (177), Expect = 8.242e-15
Identity = 44/156 (28.21%), Postives = 76/156 (48.72%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCK-NMTTLEAMQL-SAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            S  +F   +   YGNC+ FN    + +L +   G ++G+K+ L I    Y+P +   +G R+++H    YPF  + GI A+ G   S+G+ +        P++ C  N + +    L S Y     N +Y+ + C+ +C Q  ++  C C H  YP
Sbjct:  255 SHRNFTPIFYPDYGNCYIFNWGMTEETLPSANPGTEFGLKLILDIGQEDYVPFLASTAGARLMLHEQRTYPFIREEGIYAMAGTETSIGVLVDKLQRKGEPYSPCTMNGSDVAIKNLYSVY-----NTTYSIQACLHSCFQDHMIRNCSCGHYLYP 405

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Mouse
Match: Asic4 (acid-sensing (proton-gated) ion channel family member 4 [Source:MGI Symbol;Acc:MGI:2652846])

HSP 1 Score: 71.2478 bits (173), Expect = 2.132e-14
Identity = 47/154 (30.52%), Postives = 71/154 (46.10%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKC 507
            S ++F   Y  +YG C+TFN  + +SSL +   G   G+++ L I    Y+PI       +F +GIRV IH   E P+   +G G  PG    V         LP P  NC+  + L   +L  Y      ++Y+   C   C ++ +L  C C
Sbjct:  188 SASNFSVVYT-RYGKCYTFN-ADPQSSLPSRAGGMGSGLEIMLDIQQEEYLPIWRETNETSFEAGIRVQIHSQEEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRAESELREPELQGY------SAYSVSACRLRCEKEAVLQRCHC 333

[Close]

BLAST of degenerin deg-1-like vs. UniProt/SwissProt
Match: sp|P24612|MEC4_CAEEL (Degenerin mec-4 OS=Caenorhabditis elegans OX=6239 GN=mec-4 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.755e-24
Identity = 52/155 (33.55%), Postives = 86/155 (55.48%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSN 537
             DF    +  +G+CFTFN  N   +L ++  GP YG++M +++++S Y+P T  +G+R+ IH   ++PFP+  G  A  G ++S GL L     LP P+ +C     +   + S Y+    N  Y+ EGC ++C Q+ +L  C+C  P +P   N
Sbjct:  461 ADFLTHIDPAFGSCFTFN-HNRTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGDC-----VPDGKTSDYI--YSNYEYSVEGCYRSCFQQLVLKECRCGDPRFPVPEN 607

[Close]

BLAST of degenerin deg-1-like vs. UniProt/SwissProt
Match: sp|Q17298|MEC4_CAEBR (Degenerin mec-4 OS=Caenorhabditis briggsae OX=6238 GN=mec-4 PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 8.426e-24
Identity = 51/151 (33.77%), Postives = 85/151 (56.29%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
             DF    +  +G+CFTFN  N   +L ++  GP YG++M +++++S Y+P T  +G+R+ IH   ++PFP+  G  A  G ++S GL L     LP P+ +C     +   + S Y+    N  Y+ EGC ++C Q+ +L  C+C  P +P
Sbjct:  461 ADFLTHIDPVFGSCFTFN-HNRTVNLTSIRAGPMYGLRMLVYVNASDYMPTTEATGVRLTIHDKEDFPFPDTFGYSAPTGYVSSFGLRLRKMSRLPAPYGDC-----VPDGKTSDYI--YSNYEYSVEGCYRSCFQQLVLKECRCGDPRFP 603

[Close]

BLAST of degenerin deg-1-like vs. UniProt/SwissProt
Match: sp|Q19038|DEL1_CAEEL (Degenerin del-1 OS=Caenorhabditis elegans OX=6239 GN=del-1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.023e-23
Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            T+F    +  +GNC+TFN  N +  L +   GP YG+++ +F++SS Y+P T  +G+R+ IH   E PFP+  G  A  G ++S G+ L     LP P+ NC  +        S Y G      Y  EGC ++C Q  I+  C C  P YP
Sbjct:  352 TEFKLHIDPSFGNCYTFN-ANPEKKLASSRAGPSYGLRLMMFVNSSDYLPTTEATGVRIAIHGKEECPFPDTFGYSAPTGVISSFGISLRNINRLPQPYGNC--LQKDNPQSRSIYKGY----KYEPEGCFRSCYQYRIIAKCGCADPRYP 495

[Close]

BLAST of degenerin deg-1-like vs. UniProt/SwissProt
Match: sp|Q60NC0|MEC10_CAEBR (Degenerin mec-10 OS=Caenorhabditis briggsae OX=6238 GN=mec-10 PE=3 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.267e-23
Identity = 50/150 (33.33%), Postives = 82/150 (54.67%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            DF    +  +GNCF FN  + +    ++  GPQYG+++ LF+++S Y+P +   GIR+ IH   ++PFP+  G  A  G ++S G+ +     LP P+ +C     +E    S Y+      +Y+ EGC +TC Q+ I+  C C  P +P
Sbjct:  422 DFELVADPTFGNCFVFN-HDREIFKSSVRAGPQYGLRVMLFVNASDYLPTSEAVGIRLTIHDKDDFPFPDTFGYSAPTGYISSFGMRMKKMSRLPAPYGDC-----VEDGTTSNYI--YKGYAYSTEGCYRTCFQELIIDRCGCSDPRFP 563

[Close]

BLAST of degenerin deg-1-like vs. UniProt/SwissProt
Match: sp|P34886|MEC10_CAEEL (Degenerin mec-10 OS=Caenorhabditis elegans OX=6239 GN=mec-10 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.164e-23
Identity = 53/152 (34.87%), Postives = 83/152 (54.61%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNLMNN--KSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            DF    +  +GNCF FN      KSS++    GPQYG+++ LF+++S Y+P +   GIR+ IH   ++PFP+  G  A  G ++S G+ +     LP P+ +C     +E    S Y+      +Y+ EGC +TC Q+ I+  C C  P +P
Sbjct:  422 DFELVADPTFGNCFVFNHDREIFKSSVRA---GPQYGLRVMLFVNASDYLPTSEAVGIRLTIHDKDDFPFPDTFGYSAPTGYISSFGMRMKKMSRLPAPYGDC-----VEDGATSNYI--YKGYAYSTEGCYRTCFQELIIDRCGCSDPRFP 563

[Close]

BLAST of degenerin deg-1-like vs. TrEMBL
Match: A0A1S3KGW9 (degenerin deg-1 OS=Lingula unguis OX=7574 GN=LOC106181584 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.146e-27
Identity = 61/160 (38.12%), Postives = 89/160 (55.62%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSA---YVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNML 543
            ++F +F +Y+YGNCF FN   NK+       G  YG+ + L+I+   YI  T ++G+RV IH     PF E+  I   PGK  S+G+     + +  P+ +CKN T  E  +L+A   Y  L+ N  Y++E C KTC Q+ I+  C C HP YP N+  L
Sbjct:  256 SNFTEFSDYKYGNCFIFNSGMNKTVRSAARGGHTYGLSLELYIEQDEYIMTTESAGVRVTIHEQNSMPFAEEHSIVVAPGKHTSIGISKKRFVRIDSPYGDCKNYTEEENYELNAYSEYYNLIVN--YSREACFKTCLQRQIIRDCGCAHPSYPANATAL 413

[Close]

BLAST of degenerin deg-1-like vs. TrEMBL
Match: A0A1S3KFQ5 (degenerin deg-1-like OS=Lingula unguis OX=7574 GN=LOC106181583 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.099e-27
Identity = 61/160 (38.12%), Postives = 89/160 (55.62%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSA---YVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNML 543
            ++F +F +Y+YGNCF FN   NK+       G  YG+ + L+I+   YI  T ++G+RV IH     PF E+  I   PGK  S+G+     + +  P+ +CKN T  E  +L+A   Y  L+ N  Y++E C KTC Q+ I+  C C HP YP N+  L
Sbjct:  227 SNFTEFSDYKYGNCFIFNSGMNKTVRSAARGGHTYGLSLELYIEQDEYIMTTESAGVRVTIHEQNSMPFAEEHSIVVAPGKHTSIGISKKRFVRIDSPYGDCKNYTEEENYELNAYSEYYNLIVN--YSREACFKTCLQRQIIRDCGCAHPSYPANATAL 384

[Close]

BLAST of degenerin deg-1-like vs. TrEMBL
Match: V4ATR6 (Uncharacterized protein OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_157983 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 5.299e-26
Identity = 60/152 (39.47%), Postives = 89/152 (58.55%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAM-QL-SAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFY 522
            +F  F+N++YGNC+TFN     +S +T   GP YG+ + L+++ S Y+P ++  +GIRV+IH     PFPED G+   PG   S+GL     + L  PH++C N+ T + + QL SAY        Y+K  CMK+C Q+ I+  C C  P Y
Sbjct:  244 NFTAFHNHKYGNCYTFNHPGKTNSAKTRFAGPLYGLTLELYLEQSDYVPALSQEAGIRVVIHSRNATPFPEDEGVSVSPGYATSIGLQAVEMVRLGPPHSDCANIGTTDDLYQLHSAY-------DYSKISCMKSCYQELIIDECGCESPVY 388

[Close]

BLAST of degenerin deg-1-like vs. TrEMBL
Match: A0A0N4Z4F2 (Uncharacterized protein OS=Parastrongyloides trichosuri OX=131310 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.252e-25
Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = 1

Query:   70 LTDFYQFYNYQYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCK--NMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            + DF    +  +GNC+TFN  +NN     +   GP YG++M L+++SS Y+P T  +GIR+ IH  TE+PFP+  G  A  G ++S GL L     L  P+ +C   N T  E         +  N +Y  EGC ++C QK I+  C C  P YP ++N   Y +I
Sbjct:  344 VKDFKLHVDPAFGNCYTFNYNLNNSKIFYSSRAGPSYGLRMMLYVNSSDYLPTTEATGIRIAIHDQTEWPFPDTFGYSAPTGAISSFGLSLRKVRRLGPPYGDCVPFNETLPEDY-------IFRNNAYEPEGCYRSCYQKKIISKCNCADPRYPVSNNTTKYCDI 502

[Close]

BLAST of degenerin deg-1-like vs. TrEMBL
Match: A0A1S3H4D2 (amiloride-sensitive sodium channel subunit alpha isoform X1 OS=Lingula unguis OX=7574 GN=LOC106152063 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.763e-25
Identity = 60/170 (35.29%), Postives = 97/170 (57.06%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLET----GPQYGVKMTLFIDSSSYI-PITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPH-NNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            S  +F +F N+Q+GNC+TFN  +   S   +ET    GP YG+ + ++I+ S YI  ++ ++G+RV IH      FPED G    PG L S+ +        P P+ + C+N TT E+ Q S +  +  N  Y+  GCMKTC Q++++  C C  P YP++ ++ A+ ++
Sbjct:  344 SSANFTRFNNHQFGNCYTFN--SGWDSSIPVETSSNAGPLYGLSLEMYIEQSEYIGDLSESAGVRVQIHSQRSMAFPEDEGFNIAPGYLTSMAMTRVEITRRPHPYPSKCRNFTTEESKQKSVFTSVH-NVDYSVSGCMKTCYQRYVISECACGDPAYPFSLDLEAFSDL 510

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Cavefish
Match: asic1a (acid-sensing ion channel 1A-like [Source:NCBI gene;Acc:103034215])

HSP 1 Score: 62.3882 bits (150), Expect = 1.993e-11
Identity = 41/152 (26.97%), Postives = 68/152 (44.74%), Query Frame = 1

Query:  100 QYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNS 534
            +YG C+TFN       L +++ G   G+++ L I    Y+P+       +F +GI+V +H   E PF + +G G  PG    V       + LP P  NCK   TL++   +A         Y+   C   C  ++++  C C     P ++
Sbjct:  194 RYGKCYTFNSGETGPLLISMKGGMGSGLEIMLDIQQDEYLPVWGETDETSFEAGIKVQVHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRLVYLPPPWGNCKT-GTLDSDFFTA---------YSISACRIDCETRYLVENCNCRMVHMPGDA 335

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Cavefish
Match: asic4a (acid-sensing ion channel 4 [Source:NCBI gene;Acc:103040152])

HSP 1 Score: 62.003 bits (149), Expect = 2.994e-11
Identity = 46/155 (29.68%), Postives = 67/155 (43.23%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPN-ASYTKEGCMKTCTQKFILIYCKC 507
            S  DF   Y  +YG C+TFN  N  +S +T + G   G+++ L I    Y+PI       +  +GIRV IH   E P+   +G G  PG    V         LP P  NC++ T            L+P   +Y+   C   C  + +   C+C
Sbjct:  189 SAEDFSVVYT-RYGKCYTFN-GNKTTSRKTKQGGMGNGLEIMLDIQQDEYLPIWRETNETSLEAGIRVQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRSSTEQ----------LIPGYDTYSISACRLHCETQAVQQECQC 331

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Cavefish
Match: asic4a (acid-sensing ion channel 4 [Source:NCBI gene;Acc:103040152])

HSP 1 Score: 61.2326 bits (147), Expect = 4.772e-11
Identity = 46/155 (29.68%), Postives = 67/155 (43.23%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPN-ASYTKEGCMKTCTQKFILIYCKC 507
            S  DF   Y  +YG C+TFN  N  +S +T + G   G+++ L I    Y+PI       +  +GIRV IH   E P+   +G G  PG    V         LP P  NC++ T            L+P   +Y+   C   C  + +   C+C
Sbjct:  189 SAEDFSVVYT-RYGKCYTFN-GNKTTSRKTKQGGMGNGLEIMLDIQQDEYLPIWRETNETSLEAGIRVQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRSSTEQ----------LIPGYDTYSISACRLHCETQAVQQECQC 331

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Cavefish
Match: asic1c (acid-sensing ion channel 1C-like [Source:NCBI gene;Acc:103034544])

HSP 1 Score: 60.8474 bits (146), Expect = 6.099e-11
Identity = 42/155 (27.10%), Postives = 71/155 (45.81%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V +H  +E PFP ++G    PG    V         LP P  +CK+ T +++   S         +Y+   C   C  +++L  C C     P  S +
Sbjct:  191 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGDTDETSYEAGIKVQLHSQSEPPFPNELGFWVTPGFQTFVSTQEQRLQYLPPPWGDCKS-TPIDSEFFS---------TYSITACRIDCETRYLLENCNCRMVHMPGTSTV 335

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Cavefish
Match: asic1c (acid-sensing ion channel 1C-like [Source:NCBI gene;Acc:103034544])

HSP 1 Score: 60.4622 bits (145), Expect = 9.595e-11
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V IH   E PF + +G G  PG    V         LP P  +CK+ T +++   S         +Y+   C   C  +++L  C C     P  S +
Sbjct:  209 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGDTDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKS-TPIDSEFFS---------TYSITACRIDCETRYLLENCNCRMVHMPGTSTV 353

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
Match: SCNN1B (sodium channel epithelial 1 beta subunit [Source:HGNC Symbol;Acc:HGNC:10600])

HSP 1 Score: 85.1149 bits (209), Expect = 6.156e-20
Identity = 48/154 (31.17%), Postives = 80/154 (51.95%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYP 525
            S T+F  F++  YGNCF FN   N++ +Q    G +YG+K+ L ID   YIP +T  +G  +++H    YPF  D+G+    G   SVG+ +        P+++C    T++   L     L    +Y+ + C+++C Q  ++  C C +  YP
Sbjct:  261 SATNFTTFFHPMYGNCFIFNWGENETVMQVSNPGVEYGLKLVLSIDQDEYIPFLTTIAGAVIMVHDQNTYPFLSDLGVFVKTGVETSVGIEVGQLQRQGAPYSDC----TMDGTDL-PITNLYNGTAYSVQACLRSCFQTKMIEMCGCGYYLYP 409

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
Match: SCNN1A (sodium channel epithelial 1 alpha subunit [Source:HGNC Symbol;Acc:HGNC:10599])

HSP 1 Score: 77.7962 bits (190), Expect = 1.809e-17
Identity = 50/169 (29.59%), Postives = 87/169 (51.48%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNC-KNMTTLEAMQL--SAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPY--NSNMLAYRN 555
            S +++ +F++  YGNC+TFN  N+    Q  + G  YG+ + L  + + YIP ++  +G R+++H     PF E+ G    PG   S+G+ +  A  +P P+ NC ++ + +  + L  SAY   +P  S         C Q  ++  C C + FYP   N++  +Y N
Sbjct:  226 SDSEYSRFHHPTYGNCYTFNSANSSKLWQASKPGRDYGLSLILRTEQNDYIPFLSTVAGARIMVHDQESPPFMEEGGFDMRPGFETSLGIRMLEATRMPDPYGNCTEDGSNVPVLNLYSSAYTVQVPECS---------CFQLALVEACGCGYYFYPLPPNASYCSYNN 385

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
Match: SCNN1G (sodium channel epithelial 1 gamma subunit [Source:HGNC Symbol;Acc:HGNC:10602])

HSP 1 Score: 63.929 bits (154), Expect = 1.181e-12
Identity = 46/164 (28.05%), Postives = 74/164 (45.12%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKC--YHPFYPYNSNMLAYRN 555
            T F +  +   GNCFTFN  ++  SL     G  YG+ M L     + +P +   +G ++ IH     PF E VGI   P   +S+GL +     L  P+++C    T++   +   V  + ++ Y+ + C  +C Q  ++  C C  Y    P  S    Y N
Sbjct:  264 TSFKKLQHPILGNCFTFNDGSDGKSLDIASAGIDYGLHMVLNTRQDNSLPYLAMGAGAKIGIHLQNTTPFIEAVGIDIPPAMESSLGLRVNDVQKLGDPYSDC----TMDGSDID--VKSLYDSPYSVQTCQNSCFQWEMIKSCGCANYEQPLPEGSRFCNYDN 421

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
Match: asic1b (acid-sensing (proton-gated) ion channel 1b [Source:NCBI gene;Acc:407672])

HSP 1 Score: 59.6918 bits (143), Expect = 3.247e-11
Identity = 43/152 (28.29%), Postives = 68/152 (44.74%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKC 507
            DF   Y  +YG C+TFN   + +  L +++ G   G++M L I    Y+P+       +F +GI+V IH   E PF + +G G  PG    V         LP P  +CK+ T  E+             +Y+   C   C  ++++  C C
Sbjct:  177 DFTVVYT-RYGKCYTFNSGKDGRPLLTSMKGGMGNGLEMMLDIQQDEYLPVWGETDETSFEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQEQRLTYLPYPWGDCKD-TPPESEFFD---------TYSIAACQIDCETRYLVENCNC 317

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
Match: asic1b (acid-sensing (proton-gated) ion channel 1b [Source:NCBI gene;Acc:407672])

HSP 1 Score: 55.8398 bits (133), Expect = 7.692e-10
Identity = 41/161 (25.47%), Postives = 67/161 (41.61%), Query Frame = 1

Query:   76 DFYQFYNYQYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNS 534
            DF   Y  +YG C+TFN     +  L T++ G   G+++ L I    Y+P+       +F +GI+V IH   E P  + +G G  PG    V       + LP P  +CK+                   +Y+   C   C  ++++  C C     P ++
Sbjct:  189 DFITVYT-RYGKCYTFNSGKGGRPLLTTVKGGMGNGLEIMLDIQQEEYLPVWGENDETSFEAGIKVQIHSQDEPPLIDQLGFGVSPGFQTFVSCQEQRLIYLPPPWGDCKSTPISSDF----------FETYSITACRIDCETRYLVENCNCRMVHMPGDA 338

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Nematostella
Match: EDO31696 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SX71])

HSP 1 Score: 70.4774 bits (171), Expect = 1.003e-14
Identity = 47/155 (30.32%), Postives = 71/155 (45.81%), Query Frame = 1

Query:   88 FYNYQYGNCFTFNL-----MNNKSSLQTLETGPQYGVKMTLFIDSSSYIP-ITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNS 534
            F++Y++GNCF FN       N +S L    TGP  G+++ L I    YI  IT  +G  + +    + PFPE+ G    PG    +GL     +    PHNN   +T   ++          N SY+K  C+ +C     +  CKC    +P +S
Sbjct:  108 FWHYRFGNCFVFNPSIGWNRNTRSRLHIYRTGPLNGLQLQLNIQQEEYIDQITKRAGAMIQVFPFGQMPFPEERGTLVAPGFSTDIGL-EKMDIKRVDPHNNGSCVTDEASINTENIFKQKFNTSYSKTACVLSCLAYHQMHECKCMEYRFPTDS 261

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Nematostella
Match: EDO37452 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFR0])

HSP 1 Score: 65.855 bits (159), Expect = 6.553e-13
Identity = 44/158 (27.85%), Postives = 74/158 (46.84%), Query Frame = 1

Query:   85 QFYNYQYGNCFTFNLMNN-----KSSLQTLETGPQYGVKMTLFIDSSSYI-PITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALIL-PLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSN 537
            +F++Y+YGNC+ FN   +     K  L++ + GP  G+ + L  +   Y+  ++  +G+RVLI    E P P + GI   PG   + G+ +T  L   P  + +C +   ++   L        N SY++  CM +C     L  C C    +P   N
Sbjct:  312 RFWHYRYGNCYVFNSGKDWQGEPKPILRSNKPGPASGLTLELNAEQHEYVGQLSHEAGMRVLISTQGEMPSPLEKGISVSPGFSTTTGIRMTNILRADPFNNKSCLSSDDIDPENLYKK---RYNVSYSRTTCMDSCLAHKQLDMCGCLEYRFPNIDN 466

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Nematostella
Match: EDO37453 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SFR1])

HSP 1 Score: 65.0846 bits (157), Expect = 9.414e-13
Identity = 45/160 (28.12%), Postives = 75/160 (46.88%), Query Frame = 1

Query:   85 QFYNYQYGNCFTFNLMNN-----KSSLQTLETGPQYGVKMTLFIDSSSYI-PITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALIL-PLPHNNCKNMTTLEAMQL--SAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSN 537
            +F++Y+YGNC+ FN   +     K  L++ + GP  G+ + L  +   Y+  ++  +G+RVLI    E P P + GI   PG   + G+ LT  L   P  + +C +   ++   L    Y     N SY++  CM +C     +  C C    +P   N
Sbjct:  310 RFWHYRYGNCYVFNSGKDWQGEPKPILRSNKPGPASGLTLELNAEQHEYVGQLSHEAGMRVLISTQGEMPSPLEKGISVSPGFSTATGIRLTNILRADPFNNKSCLSSDDIDPENLYRKRY-----NVSYSRTTCMDSCLAHKQVDMCGCLEYRFPNIDN 464

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Nematostella
Match: EDO34319 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SPS3])

HSP 1 Score: 64.3142 bits (155), Expect = 1.198e-12
Identity = 34/88 (38.64%), Postives = 51/88 (57.95%), Query Frame = 1

Query:   88 FYNYQYGNCFTFNL-MNNKS----SLQTLETGPQYGVKMTLFIDSSSYI-PITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGL 333
            F+N++YGNC+TFN  M+ K      L    TGP YG+ + LFI+   YI P T  +G+R+L+    + PFP+  G    P   ++VG+
Sbjct:  190 FWNFRYGNCYTFNQGMSEKGVAIKPLTLSNTGPNYGLTLDLFINQEQYIAPYTQEAGVRILLSDQNQIPFPDSDGFTVSPSSSSAVGI 277

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Nematostella
Match: EDO36191 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SJB5])

HSP 1 Score: 64.3142 bits (155), Expect = 1.405e-12
Identity = 47/141 (33.33%), Postives = 69/141 (48.94%), Query Frame = 1

Query:   88 FYNYQYGNCFTFNL---MNNKS--SLQTLETGPQYGVKMTLFIDSSSY-IPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKE----GCMKTCTQ 480
            F++++YGNC+TFN    +N     SL + + GP YG+ + LFID   Y IP++  +G++VL+      PFP   G    PG   S G+     +   L +N  K     E  +  A V  + N S   E    GC K+C Q
Sbjct:  212 FWHWRYGNCYTFNQGVDVNGTELPSLASSKPGPMYGLTLDLFIDQEQYIIPLSQEAGVKVLLSDQRNIPFPFTHGFTVQPGVSASAGI-RQGCMSSCLANNQFKVCNCTEG-KFRAKVKCLNNISKKYENGSLGCSKSCPQ 350

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Medaka
Match: asic4a (acid sensing ion channel subunit family member 4 [Source:NCBI gene;Acc:101159336])

HSP 1 Score: 62.7734 bits (151), Expect = 1.707e-11
Identity = 47/165 (28.48%), Postives = 70/165 (42.42%), Query Frame = 1

Query:   67 SLTDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            S  DF   Y  +YG C+TFN  N  +S +T + G   G+++ L I    Y+PI       +  +GIRV IH   E P+   +G G  PG    V         LP P  NC++ +     +   Y       +Y+   C   C    +L  CKC     P  +++
Sbjct:  186 SAEDFSVVYT-RYGKCYTFN-GNKTASRKTKQGGMGNGLEIMLDIQQDEYLPIWRETNETSLEAGIRVQIHSQDEPPYIHQLGFGVSPGFQTFVSCQEQRLTYLPQPWGNCRSTSK---EKFPGY------DTYSISACRLLCETNEVLRVCKCRMVHMPGTADI 339

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Medaka
Match: ENSORLT00000021925.2 (acid-sensing ion channel 1C [Source:NCBI gene;Acc:101174951])

HSP 1 Score: 60.4622 bits (145), Expect = 1.085e-10
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V IH   E PF + +G G  PG    V         LP P  +CK+ T +++   S         +Y+   C   C  +++L  C C     P  S +
Sbjct:  189 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKS-TPIDSEFFS---------TYSITACRIDCETRYLLENCNCRMVHMPGTSTV 333

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Medaka
Match: ENSORLT00000015581.2 (acid-sensing ion channel 1C [Source:NCBI gene;Acc:101174951])

HSP 1 Score: 60.4622 bits (145), Expect = 1.098e-10
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V IH   E PF + +G G  PG    V         LP P  +CK+ T +++   S         +Y+   C   C  +++L  C C     P  S +
Sbjct:  179 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKS-TPIDSEFFS---------TYSITACRIDCETRYLLENCNCRMVHMPGTSTV 323

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Medaka
Match: ENSORLT00000021936.2 (acid-sensing ion channel 1C [Source:NCBI gene;Acc:101174951])

HSP 1 Score: 60.077 bits (144), Expect = 1.271e-10
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V IH   E PF + +G G  PG    V         LP P  +CK+ T +++   S         +Y+   C   C  +++L  C C     P  S +
Sbjct:  213 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKS-TPIDSEFFS---------TYSITACRIDCETRYLLENCNCRMVHMPGTSTV 357

[Close]

BLAST of degenerin deg-1-like vs. Ensembl Medaka
Match: ENSORLT00000035361.1 (acid-sensing ion channel 1C [Source:NCBI gene;Acc:101174951])

HSP 1 Score: 60.077 bits (144), Expect = 1.352e-10
Identity = 43/155 (27.74%), Postives = 70/155 (45.16%), Query Frame = 1

Query:  100 QYGNCFTFNL-MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPI-------TFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNM 540
            +YG C+TFN  ++    L TL+ G   G+++ L I    Y+P+       ++ +GI+V IH   E PF + +G G  PG    V         LP P  +CK+ T +++   S         +Y+   C   C  +++L  C C     P  S +
Sbjct:  213 RYGKCYTFNSGLDGNPLLTTLKGGTGNGLEIMLDIQQDEYLPVWGETDETSYEAGIKVQIHSQDEPPFIDQLGFGVAPGFQTFVSCQQQLLQYLPPPWGDCKS-TPIDSEFFS---------TYSITACRIDCETRYLLENCNCRMVHMPGTSTV 357

[Close]

BLAST of degenerin deg-1-like vs. Planmine SMEST
Match: SMESG000053477.1 (SMESG000053477.1)

HSP 1 Score: 294.664 bits (753), Expect = 1.017e-102
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 1

Query:  130 MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            MNNKSSLQTLETGPQYGVKMTLFIDSS+YIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPN SYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI
Sbjct:    1 MNNKSSLQTLETGPQYGVKMTLFIDSSTYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNVSYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 143

[Close]

BLAST of degenerin deg-1-like vs. Planmine SMEST
Match: SMESG000053477.1 (SMESG000053477.1)

HSP 1 Score: 297.36 bits (760), Expect = 2.079e-102
Identity = 141/143 (98.60%), Postives = 142/143 (99.30%), Query Frame = 1

Query:  130 MNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            MNNKSSLQTLETGPQYGVKMTLFIDSS+YIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPN SYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI
Sbjct:    1 MNNKSSLQTLETGPQYGVKMTLFIDSSTYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNVSYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 143

[Close]

BLAST of degenerin deg-1-like vs. Planmine SMEST
Match: SMESG000053446.1 (SMESG000053446.1)

HSP 1 Score: 280.411 bits (716), Expect = 1.992e-92
Identity = 127/162 (78.40%), Postives = 149/162 (91.98%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            +DFYQFYN+QYGNCFT+NL++NKS LQTLE GPQYG+KM LFI+SS+YIPIT NSGIR+L+HHPTEYPFPEDVGIGA+PGKLNSVGL LT A I   P+N+C+N+TT +AM+LSAYVG +PN SYTKEGCMKTCTQK+IL+YC+CYHPFYPYNS+MLAYRNI
Sbjct:  223 SDFYQFYNFQYGNCFTYNLLSNKSILQTLEIGPQYGLKMILFINSSAYIPITLNSGIRLLVHHPTEYPFPEDVGIGAVPGKLNSVGLQLTVATISYPPYNSCQNLTTTQAMELSAYVGQLPNVSYTKEGCMKTCTQKYILMYCQCYHPFYPYNSSMLAYRNI 384

[Close]

BLAST of degenerin deg-1-like vs. Planmine SMEST
Match: SMESG000053446.1 (SMESG000053446.1)

HSP 1 Score: 281.567 bits (719), Expect = 1.081e-91
Identity = 127/162 (78.40%), Postives = 149/162 (91.98%), Query Frame = 1

Query:   73 TDFYQFYNYQYGNCFTFNLMNNKSSLQTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI 558
            +DFYQFYN+QYGNCFT+NL++NKS LQTLE GPQYG+KM LFI+SS+YIPIT NSGIR+L+HHPTEYPFPEDVGIGA+PGKLNSVGL LT A I   P+N+C+N+TT +AM+LSAYVG +PN SYTKEGCMKTCTQK+IL+YC+CYHPFYPYNS+MLAYRNI
Sbjct:  223 SDFYQFYNFQYGNCFTYNLLSNKSILQTLEIGPQYGLKMILFINSSAYIPITLNSGIRLLVHHPTEYPFPEDVGIGAVPGKLNSVGLQLTVATISYPPYNSCQNLTTTQAMELSAYVGQLPNVSYTKEGCMKTCTQKYILMYCQCYHPFYPYNSSMLAYRNI 384

[Close]

BLAST of degenerin deg-1-like vs. Planmine SMEST
Match: SMESG000006412.1 (SMESG000006412.1)

HSP 1 Score: 54.6842 bits (130), Expect = 7.002e-9
Identity = 44/154 (28.57%), Postives = 65/154 (42.21%), Query Frame = 1

Query:   79 FYQFYNYQYGNCFTFNLMN--NKSSLQTLETGPQYGVKMTLFIDSSSY----IPITFNSGIRVLIHHPTEYPFPEDVGIGALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYTKEGCMKTCTQKFILIYCKCYHPFY 522
            F+   + +YGNCFTFN  N  N+S +    +  + G+ +T ++ +  Y    IP T   GIR+    P     PE  G+   PG   S+G+  T          NCK                  N+ YTK+ C+  C Q  I   C+CY   +
Sbjct:  176 FFPMLSNKYGNCFTFNPYNHYNRSYIINKRSRSE-GLFITFYLQNDEYLKGFIPST---GIRLHFQEPGALEMPEIYGMNLPPGFEISIGIIPTKIRRKVDIKGNCKEGHGFRKTY---------NSVYTKQACLYVCLQNVIFSKCQCYDAVF 316

The following BLAST results are available for this feature:

BLAST of degenerin deg-1-like vs. Ensembl Human
BLAST of degenerin deg-1-like vs. Ensembl Celegans
BLAST of degenerin deg-1-like vs. Ensembl Fly
BLAST of degenerin deg-1-like vs. Ensembl Zebrafish
BLAST of degenerin deg-1-like vs. Ensembl Xenopus
BLAST of degenerin deg-1-like vs. Ensembl Mouse
BLAST of degenerin deg-1-like vs. UniProt/SwissProt
BLAST of degenerin deg-1-like vs. TrEMBL
BLAST of degenerin deg-1-like vs. Ensembl Cavefish
BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
BLAST of degenerin deg-1-like vs. Ensembl Yeast
BLAST of degenerin deg-1-like vs. Ensembl Nematostella
BLAST of degenerin deg-1-like vs. Ensembl Medaka
BLAST of degenerin deg-1-like vs. Planmine SMEST

BLAST of degenerin deg-1-like vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
SCNN1G	1.646e-18	30.72	sodium channel epithelial 1 gamma subunit [Source:...	[more]
SCNN1B	9.598e-17	28.10	sodium channel epithelial 1 beta subunit [Source:H...	[more]
SCNN1B	9.791e-17	28.10	sodium channel epithelial 1 beta subunit [Source:H...	[more]
SCNN1B	1.004e-16	28.10	sodium channel epithelial 1 beta subunit [Source:H...	[more]
ASIC4	4.522e-15	29.70	acid sensing ion channel subunit family member 4 [...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
mec-4	2.166e-25	33.55	Degenerin mec-4 [Source:UniProtKB/Swiss-Prot;Acc:...	[more]
mec-4	2.166e-25	33.55	Degenerin mec-4 [Source:UniProtKB/Swiss-Prot;Acc:...	[more]
del-1	7.195e-25	35.76	Degenerin del-1 [Source:UniProtKB/Swiss-Prot;Acc:...	[more]
del-1	7.743e-25	35.76	Degenerin del-1 [Source:UniProtKB/Swiss-Prot;Acc:...	[more]
del-1	8.221e-25	35.76	Degenerin del-1 [Source:UniProtKB/Swiss-Prot;Acc:...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of degenerin deg-1-like vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
asic4a	1.378e-12	30.41	acid-sensing (proton-gated) ion channel family mem...	[more]
asic4a	3.235e-12	30.00	acid-sensing (proton-gated) ion channel family mem...	[more]
asic1c	2.218e-11	28.39	acid-sensing (proton-gated) ion channel 1c [Source...	[more]
asic2	9.535e-11	26.83	acid-sensing (proton-gated) ion channel 2 [Source:...	[more]
asic2	9.535e-11	26.83	acid-sensing (proton-gated) ion channel 2 [Source:...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
cdh12	5.036e-19	30.23	cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase...	[more]
cdh12	5.036e-19	30.23	cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase...	[more]
cdh12	5.687e-19	30.23	cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase...	[more]
cdh12	5.920e-19	30.23	cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase...	[more]
cdh12	6.481e-19	30.23	cadherin 12, type 2 (N-cadherin 2) [Source:Xenbase...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Scnn1g	4.922e-18	32.03	sodium channel, nonvoltage-gated 1 gamma [Source:M...	[more]
Scnn1b	7.205e-15	28.97	sodium channel, nonvoltage-gated 1 beta [Source:MG...	[more]
Asic4	7.966e-15	29.70	acid-sensing (proton-gated) ion channel family mem...	[more]
Scnn1b	8.242e-15	28.21	sodium channel, nonvoltage-gated 1 beta [Source:MG...	[more]
Asic4	2.132e-14	30.52	acid-sensing (proton-gated) ion channel family mem...	[more]

BLAST of degenerin deg-1-like vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P24612\|MEC4_CAEEL	2.755e-24	33.55	Degenerin mec-4 OS=Caenorhabditis elegans OX=6239 ...	[more]
sp\|Q17298\|MEC4_CAEBR	8.426e-24	33.77	Degenerin mec-4 OS=Caenorhabditis briggsae OX=6238...	[more]
sp\|Q19038\|DEL1_CAEEL	1.023e-23	35.76	Degenerin del-1 OS=Caenorhabditis elegans OX=6239 ...	[more]
sp\|Q60NC0\|MEC10_CAEBR	2.267e-23	33.33	Degenerin mec-10 OS=Caenorhabditis briggsae OX=623...	[more]
sp\|P34886\|MEC10_CAEEL	9.164e-23	34.87	Degenerin mec-10 OS=Caenorhabditis elegans OX=6239...	[more]

BLAST of degenerin deg-1-like vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1S3KGW9	1.146e-27	38.13	degenerin deg-1 OS=Lingula unguis OX=7574 GN=LOC10...	[more]
A0A1S3KFQ5	2.099e-27	38.13	degenerin deg-1-like OS=Lingula unguis OX=7574 GN=...	[more]
V4ATR6	5.299e-26	39.47	Uncharacterized protein OS=Lottia gigantea OX=2251...	[more]
A0A0N4Z4F2	1.252e-25	36.75	Uncharacterized protein OS=Parastrongyloides trich...	[more]
A0A1S3H4D2	1.763e-25	35.29	amiloride-sensitive sodium channel subunit alpha i...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
asic1a	1.993e-11	26.97	acid-sensing ion channel 1A-like [Source:NCBI gene...	[more]
asic4a	2.994e-11	29.68	acid-sensing ion channel 4 [Source:NCBI gene;Acc:1...	[more]
asic4a	4.772e-11	29.68	acid-sensing ion channel 4 [Source:NCBI gene;Acc:1...	[more]
asic1c	6.099e-11	27.10	acid-sensing ion channel 1C-like [Source:NCBI gene...	[more]
asic1c	9.595e-11	27.74	acid-sensing ion channel 1C-like [Source:NCBI gene...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
SCNN1B	6.156e-20	31.17	sodium channel epithelial 1 beta subunit [Source:H...	[more]
SCNN1A	1.809e-17	29.59	sodium channel epithelial 1 alpha subunit [Source:...	[more]
SCNN1G	1.181e-12	28.05	sodium channel epithelial 1 gamma subunit [Source:...	[more]
asic1b	3.247e-11	28.29	acid-sensing (proton-gated) ion channel 1b [Source...	[more]
asic1b	7.692e-10	25.47	acid-sensing (proton-gated) ion channel 1b [Source...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of degenerin deg-1-like vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO31696	1.003e-14	30.32	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37452	6.553e-13	27.85	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO37453	9.414e-13	28.13	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO34319	1.198e-12	38.64	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO36191	1.405e-12	33.33	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of degenerin deg-1-like vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
asic4a	1.707e-11	28.48	acid sensing ion channel subunit family member 4 [...	[more]
ENSORLT00000021925.2	1.085e-10	27.74	acid-sensing ion channel 1C [Source:NCBI gene;Acc:...	[more]
ENSORLT00000015581.2	1.098e-10	27.74	acid-sensing ion channel 1C [Source:NCBI gene;Acc:...	[more]
ENSORLT00000021936.2	1.271e-10	27.74	acid-sensing ion channel 1C [Source:NCBI gene;Acc:...	[more]
ENSORLT00000035361.1	1.352e-10	27.74	acid-sensing ion channel 1C [Source:NCBI gene;Acc:...	[more]

BLAST of degenerin deg-1-like vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000053477.1	1.017e-102	98.60	SMESG000053477.1	[more]
SMESG000053477.1	2.079e-102	98.60	SMESG000053477.1	[more]
SMESG000053446.1	1.992e-92	78.40	SMESG000053446.1	[more]
SMESG000053446.1	1.081e-91	78.40	SMESG000053446.1	[more]
SMESG000006412.1	7.002e-9	28.57	SMESG000006412.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30024734 ID=SMED30024734|Name=degenerin deg-1-like|organism=Schmidtea mediterranea sexual|type=transcript|length=560bp
ATTCTTACGTGTTTTATGTTTATAATTTTAATGGAATTTTGGAATTCTAT
GGATTTAATTTTTATCTCATTAACTGACTTTTACCAGTTTTACAATTATC
AATACGGAAACTGTTTTACATTCAATTTGATGAACAATAAAAGTTCTTTA
CAAACTCTTGAAACTGGACCTCAATACGGAGTGAAGATGACTCTTTTCAT
TGATAGCAGCAGCTATATTCCCATAACCTTTAATTCAGGAATTCGGGTAC
TAATTCACCACCCTACTGAATATCCGTTTCCTGAAGACGTCGGAATCGGA
GCTTTACCAGGGAAATTGAACTCAGTTGGACTGTTTCTGACTGCTGCATT
AATTCTTCCTCTTCCGCACAACAATTGCAAAAATATGACAACATTAGAAG
CTATGCAGCTCTCAGCTTATGTCGGTTTGATGCCAAACGCTTCCTACACA
AAAGAAGGTTGTATGAAGACATGCACCCAAAAATTCATTCTTATATATTG
CAAATGTTATCATCCGTTTTATCCATACAATAGCAACATGCTTGCGTATC
GCAACATATC

protein sequence of SMED30024734-orf-1

>SMED30024734-orf-1 ID=SMED30024734-orf-1|Name=SMED30024734-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=186bp
ILTCFMFIILMEFWNSMDLIFISLTDFYQFYNYQYGNCFTFNLMNNKSSL
QTLETGPQYGVKMTLFIDSSSYIPITFNSGIRVLIHHPTEYPFPEDVGIG
ALPGKLNSVGLFLTAALILPLPHNNCKNMTTLEAMQLSAYVGLMPNASYT
KEGCMKTCTQKFILIYCKCYHPFYPYNSNMLAYRNI

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR001873	ENaC
IPR020903	ENaC_CS

Vocabulary: **cellular component**
Term	Definition
GO:0016020	membrane
GO:0005886	plasma membrane
GO:0016021	integral component of membrane
GO:0016324	apical plasma membrane

Vocabulary: **molecular function**
Term	Definition
GO:0005272	sodium channel activity
GO:0015280	ligand-gated sodium channel activity

Vocabulary: **biological process**
Term	Definition
GO:0006814	sodium ion transport
GO:0006810	transport
GO:0006811	ion transport
GO:0035725	sodium ion transmembrane transport

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001873	Epithelial sodium channel	PRINTS	PR01078	AMINACHANNEL	coord: 160..177 score: 31.78 coord: 56..74 score: 37.05 coord: 149..160 score: 43.0 coord: 26..42 score: 47.29 coord: 80..98 score: 42.95
IPR001873	Epithelial sodium channel	PFAM	PF00858	ASC	coord: 26..178 e-value: 1.3E-30 score: 106.7
IPR001873	Epithelial sodium channel	PANTHER	PTHR11690	AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED	coord: 22..172
None	No IPR available	GENE3D	G3DSA:2.60.470.10		coord: 26..117 e-value: 2.1E-30 score: 108.0
None	No IPR available	GENE3D	G3DSA:1.10.3590.10		coord: 68..80 e-value: 2.1E-30 score: 108.0
None	No IPR available	GENE3D	G3DSA:1.10.287.820		coord: 118..181 e-value: 2.1E-30 score: 108.0
None	No IPR available	PANTHER	PTHR11690:SF248	PICKPOCKET 17, ISOFORM A	coord: 22..172
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..16 score: 0.678
IPR020903	Epithelial sodium channel, conserved site	PROSITE	PS01206	ASC	coord: 149..169

Main menu

degenerin deg-1-like

Zeng et. al., 2018

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 3

Owlery

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