TNF receptor-associated factor
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024587 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 14Note: Hover over icons to view figure legend
Homology
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF2 (TNF receptor associated factor 2 [Source:HGNC Symbol;Acc:HGNC:12032]) HSP 1 Score: 87.0409 bits (214), Expect = 9.891e-18 Identity = 71/263 (27.00%), Postives = 115/263 (43.73%), Query Frame = 2 Query: 443 LNICEKKDKCVYSLENITGII-ENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 L CE +K + ENI ++ +++ A + QH+ D + ++ L S+ Q+L R I ++ LE+ V L E T + FIWKI+ F+ K+ E ++FS AFYT GYK+CL I NG G +L FF +MKGP D L WP +V L ++DQ + ++ SF +P + N G F ++ N+ +R+D+I ++ ++ Sbjct: 269 LQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEA-LSSKVQQL---ERSIGLKDLAMADLEQKV--LEMEASTYDGV-----------------------FIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQ-----NNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVD 497
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 76.2554 bits (186), Expect = 3.723e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 381 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 537
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 76.2554 bits (186), Expect = 3.723e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 381 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 537
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 75.8702 bits (185), Expect = 3.799e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 323 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 479
BLAST of TNF receptor-associated factor vs. Ensembl Human
Match: TRAF3 (TNF receptor associated factor 3 [Source:HGNC Symbol;Acc:HGNC:12033]) HSP 1 Score: 75.8702 bits (185), Expect = 4.104e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 406 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 562
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-1 (TNF Receptor Associated Factor (TRAF) homolog; TRF-1 [Source:UniProtKB/TrEMBL;Acc:G5EG80]) HSP 1 Score: 65.4698 bits (158), Expect = 3.221e-11 Identity = 37/151 (24.50%), Postives = 70/151 (46.36%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHS--FSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 IWKI+ ++ E + D ++FS F +H GYK+ G GK + + ++KG +D L WP + +S++DQ + + ++ + ++P+ ERN G F S L +L N +++D I ++ ++ Sbjct: 265 LIWKIDKLQQRTNEAKSGADTTIFSVPFMSHRFGYKMMACACLFGDGSSAGKSISLYVLLLKGEFDPTLEWPFHRAIKISLLDQNPRPEDRVNITYVIDPRKLKANEKFLARPRGERNAAFGSQSFCS---LAILQNYVKDDKIYVQIDVD 412
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Match: trf-2 (TNF Receptor Associated Factor (TRAF) homolog [Source:UniProtKB/TrEMBL;Acc:Q9N586]) HSP 1 Score: 57.7658 bits (138), Expect = 6.109e-9 Identity = 24/61 (39.34%), Postives = 35/61 (57.38%), Query Frame = 2 Query: 845 SVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIV 1027 S++S+ FY+H GYK+ P G +Y F C+MKG +DD L WP + +V SI+ Sbjct: 182 SIYSQPFYSHGYGYKMMAVAAPYGDGLAFREYFSVFVCLMKGEWDDILEWPFRCDVTFSIL 242
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf4 (gene:FBgn0026319 transcript:FBtr0334401) HSP 1 Score: 54.299 bits (129), Expect = 1.541e-7 Identity = 38/153 (24.84%), Postives = 64/153 (41.83%), Query Frame = 2 Query: 773 TKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNE-GIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 T +WKI +S K E + S FYT GYKL + NG ++ + ++ G YD L WP + ++ +Q + S + +F +P E ++ G G FIS + LH ++ D++ LR ++ Sbjct: 321 TGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGA--QSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFISHELLH-SRPFIKGDTVFLRVKVD 470
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf4 (gene:FBgn0026319 transcript:FBtr0077429) HSP 1 Score: 53.9138 bits (128), Expect = 1.844e-7 Identity = 38/153 (24.84%), Postives = 64/153 (41.83%), Query Frame = 2 Query: 773 TKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNE-GIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 T +WKI +S K E + S FYT GYKL + NG ++ + ++ G YD L WP + ++ +Q + S + +F +P E ++ G G FIS + LH ++ D++ LR ++ Sbjct: 330 TGTLLWKITDWSAKMAEARGKDGLELVSPPFYTSQYGYKLQASMFLNGNGPGENTHVSVYIKVLPGEYDALLKWPFSHSITFTLFEQGA--QSGQGGVAESFVPDPTWENFQRPSNEPDQLGFGFPRFISHELLH-SRPFIKGDTVFLRVKVD 479
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf-like (gene:FBgn0030748 transcript:FBtr0074275) HSP 1 Score: 51.2174 bits (121), Expect = 1.472e-6 Identity = 36/155 (23.23%), Postives = 70/155 (45.16%), Query Frame = 2 Query: 569 EFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQ 1033 +++ + + D E+ N++ ++ E +E L+ A++ ++ L+ + +++ + IW+I +S K+LE D + S F GY L L I NG + G+ + ++ G YD L WP +L+ + I DQ Sbjct: 272 DYVTSKQATLDYEVKNVKNIVCETEERCDKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGH-------LIWRIKDYS-KKLEESKQYDTILHSAMFSNKAFGYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQ 418
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf-like (gene:FBgn0030748 transcript:FBtr0074273) HSP 1 Score: 50.8322 bits (120), Expect = 1.684e-6 Identity = 36/155 (23.23%), Postives = 70/155 (45.16%), Query Frame = 2 Query: 569 EFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQ 1033 +++ + + D E+ N++ ++ E +E L+ A++ ++ L+ + +++ + IW+I +S K+LE D + S F GY L L I NG + G+ + ++ G YD L WP +L+ + I DQ Sbjct: 250 DYVTSKQATLDYEVKNVKNIVCETEERCDKLDRALHQTMQNISDLETQMAMQQRIASVQNIRGH-------LIWRIKDYS-KKLEESKQYDTILHSAMFSNKAFGYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQ 396
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Match: Traf-like (gene:FBgn0030748 transcript:FBtr0308606) HSP 1 Score: 50.447 bits (119), Expect = 2.140e-6 Identity = 28/84 (33.33%), Postives = 40/84 (47.62%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQ 1033 IW+I +S K+LE D + S F GY L L I NG + G+ + ++ G YD L WP +L+ + I DQ Sbjct: 257 LIWRIKDYS-KKLEESKQYDTILHSAMFSNKAFGYALRLDIYLNGKGTWKGRNMIACLNVLSGEYDPLLAWPCRLQAEIIIRDQ 339
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf2b (Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]) HSP 1 Score: 82.0333 bits (201), Expect = 2.946e-16 Identity = 70/258 (27.13%), Postives = 114/258 (44.19%), Query Frame = 2 Query: 467 KCVYSLENITGII-ENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISEN---QESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 K V +LENI ++ + +++ A I QH+ D E ++ NL ++ ++L R L + + ES Q+L E C + FIWKI FS ++ + ++FS AFY+ GYK+CL + NG G +L FF +MKG YD L WP +V L ++DQ + ++ SF +P E N G F +L ++ LR+D+I ++ ++ Sbjct: 308 KKVTTLENIVCVLNKEVERSALTMEAISRQHRLDQEKIE-NLSNKVRQL--ERTLTTRDLQLAESEQSLRELQFCTYD-----------------------------GVFIWKIAEFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPFSQKVTLMLLDQ-----NNREHIIDAFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVD 528
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf2b (Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]) HSP 1 Score: 82.0333 bits (201), Expect = 2.946e-16 Identity = 70/258 (27.13%), Postives = 114/258 (44.19%), Query Frame = 2 Query: 467 KCVYSLENITGII-ENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISEN---QESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 K V +LENI ++ + +++ A I QH+ D E ++ NL ++ ++L R L + + ES Q+L E C + FIWKI FS ++ + ++FS AFY+ GYK+CL + NG G +L FF +MKG YD L WP +V L ++DQ + ++ SF +P E N G F +L ++ LR+D+I ++ ++ Sbjct: 308 KKVTTLENIVCVLNKEVERSALTMEAISRQHRLDQEKIE-NLSNKVRQL--ERTLTTRDLQLAESEQSLRELQFCTYD-----------------------------GVFIWKIAEFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPFSQKVTLMLLDQ-----NNREHIIDAFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVD 528
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: unm_sa808 (un-named sa808 [Source:ZFIN;Acc:ZDB-GENE-120727-21]) HSP 1 Score: 79.337 bits (194), Expect = 3.725e-16 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIW+I+ F++K+ + ++FS AFYT GYK+CL I NG G +L FF +M+G D L WP +V L ++DQ + ++ SF +P E N G F +L N+ +R+D+I ++ ++ Sbjct: 134 FIWRISDFTKKRQDAIAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGMSDALLKWPFNQKVTLMLLDQ-----SNREHIIDAFRPDITSSSFQRPVSEMNIASGCPLFCPLAKLEGKNSYIRDDTIFIKAIVD 277
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: traf2b (Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]) HSP 1 Score: 81.6481 bits (200), Expect = 3.895e-16 Identity = 70/258 (27.13%), Postives = 114/258 (44.19%), Query Frame = 2 Query: 467 KCVYSLENITGII-ENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISEN---QESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 K V +LENI ++ + +++ A I QH+ D E ++ NL ++ ++L R L + + ES Q+L E C + FIWKI FS ++ + ++FS AFY+ GYK+CL + NG G +L FF +MKG YD L WP +V L ++DQ + ++ SF +P E N G F +L ++ LR+D+I ++ ++ Sbjct: 321 KKVTTLENIVCVLNKEVERSALTMEAISRQHRLDQEKIE-NLSNKVRQL--ERTLTTRDLQLAESEQSLRELQFCTYD-----------------------------GVFIWKIAEFSRRRQDAVAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMKGKYDALLKWPFSQKVTLMLLDQ-----NNREHIIDAFRPDVSSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVD 541
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Match: BX901915.1 (pep chromosome:GRCz11:CHR_ALT_CTG5_1_18:28764891:28768979:-1 gene:ENSDARG00000109857.1 transcript:ENSDART00000191629.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX901915.1) HSP 1 Score: 78.5666 bits (192), Expect = 6.760e-16 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 F+WKI+ FS+K+ + ++FS AFYT GYK+CL I NG G +L FF +M+G D L WP +V L ++DQ + ++ SF +P + N G F +L N+ +R+D+I ++ ++ Sbjct: 128 FVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQ-----NNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIVD 271
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: egf (epidermal growth factor [Source:Xenbase;Acc:XB-GENE-951823]) HSP 1 Score: 82.4185 bits (202), Expect = 2.994e-16 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPN-GANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERN-EGIGDNEFISFKELHLL--NNILRNDSILLRCSINA 1231 FIW+IN+F+ E + + S+ FYT GYKLCL ++ + Q Y+ F M+G YD LPWP++ + LSI+DQ + + E+L +F +P RN +G G +++F L L ++ND++L+RCS+ Sbjct: 389 FIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELL--AFQRPTVARNPKGFG---YVTFMHLQALKQRQYVKNDTLLVRCSVTT 537
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: sytl2 (synaptotagmin like 2 [Source:Xenbase;Acc:XB-GENE-945155]) HSP 1 Score: 79.337 bits (194), Expect = 2.632e-15 Identity = 50/157 (31.85%), Postives = 73/157 (46.50%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNE------GIGDNEFISFKELHLLNNILRNDSILLRCSINAP 1234 IWKI+ +S K E + + FS FYTH GYKL + NG G YL + ++ G YD+ L WP V S++DQ K + + +F KP RN G G +FIS +++ N +R+++I LR S+ P Sbjct: 310 LIWKISDYSRKVQEAKVRGNFESFSPPFYTHKYGYKLQVSAFLNGNGSGEGSYLSVYIRVLPGEYDNLLEWPFSYRVTFSLLDQSDPSLSKPQHITETFNPDPNWKNFQKPTGSRNSLDESTLGFGYPKFISHEDIR-KRNYVRDNAIFLRASVEIP 465
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: hspb6 (heat shock protein family B (small) member 6 [Source:Xenbase;Acc:XB-GENE-876273]) HSP 1 Score: 73.9442 bits (180), Expect = 8.528e-14 Identity = 46/151 (30.46%), Postives = 72/151 (47.68%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNI-LRNDSILLRCSINA 1231 F+WKI+ + K + S++S AFYT GYK+CL I NG G ++ FF +MKG YD LPWP K +V +VD + ++ SF +P + N G F +L+ + +R +++ +RC I+ Sbjct: 232 FLWKISDLTNKSHDAVTGRAISLYSPAFYTAKYGYKVCLRIYLNGDGAGKGTHVSLFFTVMKGEYDALLPWPFKHKVTFVLVDH-----NNRDSVFDAFRPDVTSASFQRPINDMNVASGCPLFCPIAKLNSPKHAYIRENTLYIRCIIDT 377
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 73.9442 bits (180), Expect = 1.850e-13 Identity = 47/162 (29.01%), Postives = 76/162 (46.91%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 399 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQ----GPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 555
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Match: ssh2 (slingshot protein phosphatase 2 [Source:Xenbase;Acc:XB-GENE-993093]) HSP 1 Score: 73.559 bits (179), Expect = 1.970e-13 Identity = 47/162 (29.01%), Postives = 76/162 (46.91%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 374 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVSLMLMDQ----GPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 530
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf2 (TNF receptor-associated factor 2 [Source:MGI Symbol;Acc:MGI:101835]) HSP 1 Score: 84.3445 bits (207), Expect = 4.533e-17 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIWKI+ F+ K+ E ++FS AFYT GYK+CL + NG G +L FF +MKGP D L WP +V L ++D + ++ SF +P + N G F ++ N+ +R+D+I ++ ++ Sbjct: 361 FIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLDH-----NNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVD 504
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf2 (TNF receptor-associated factor 2 [Source:MGI Symbol;Acc:MGI:101835]) HSP 1 Score: 84.3445 bits (207), Expect = 4.770e-17 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIWKI+ F+ K+ E ++FS AFYT GYK+CL + NG G +L FF +MKGP D L WP +V L ++D + ++ SF +P + N G F ++ N+ +R+D+I ++ ++ Sbjct: 354 FIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLDH-----NNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVD 497
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 75.8702 bits (185), Expect = 2.993e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 405 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 561
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 75.8702 bits (185), Expect = 2.994e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 380 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 536
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Match: Traf3 (TNF receptor-associated factor 3 [Source:MGI Symbol;Acc:MGI:108041]) HSP 1 Score: 75.8702 bits (185), Expect = 2.994e-14 Identity = 48/162 (29.63%), Postives = 77/162 (47.53%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +L+T + IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF IM+G YD LPWP K +V L ++DQ S + + SF KP E N G F++ L +++D+I ++ ++ Sbjct: 380 FQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQGS----SRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLE-NGTYIKDDTIFIKVIVDT 536
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q12933|TRAF2_HUMAN (TNF receptor-associated factor 2 OS=Homo sapiens OX=9606 GN=TRAF2 PE=1 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 4.750e-17 Identity = 71/263 (27.00%), Postives = 115/263 (43.73%), Query Frame = 2 Query: 443 LNICEKKDKCVYSLENITGII-ENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 L CE +K + ENI ++ +++ A + QH+ D + ++ L S+ Q+L R I ++ LE+ V L E T + FIWKI+ F+ K+ E ++FS AFYT GYK+CL I NG G +L FF +MKGP D L WP +V L ++DQ + ++ SF +P + N G F ++ N+ +R+D+I ++ ++ Sbjct: 269 LQRCESLEKKTATFENIVCVLNREVERVAMTAEACSRQHRLDQDKIEA-LSSKVQQL---ERSIGLKDLAMADLEQKV--LEMEASTYDGV-----------------------FIWKISDFARKRQEAVAGRIPAIFSPAFYTSRYGYKMCLRIYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQ-----NNREHVIDAFRPDVTSSSFQRPVNDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVD 497
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q3MV19|TRF6A_XENLA (TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.380e-16 Identity = 52/153 (33.99%), Postives = 80/153 (52.29%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPN-GANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERN-EGIGDNEFISFKELHLL--NNILRNDSILLRCSIN 1228 FIW+I FS Q E + + S FYT D GYKLCL ++ + Q Y+ F M+G YD LPWP++ + LSI+DQ + ++L +F +P RN +G G +++F L+ L ++ND++L+RCS+N Sbjct: 387 FIWRIKGFSGLQKSQEEEKPVVIHSPGFYTGDPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGDYDSLLPWPLQGTIRLSILDQSESTARQDQVEVMDTKPDLL--AFQRPTAPRNPKGFG---YVTFMHLNTLKQRQYVKNDTLLVRCSVN 534
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|P39429|TRAF2_MOUSE (TNF receptor-associated factor 2 OS=Mus musculus OX=10090 GN=Traf2 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.336e-16 Identity = 46/149 (30.87%), Postives = 73/149 (48.99%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIWKI+ F+ K+ E ++FS AFYT GYK+CL + NG G +L FF +MKGP D L WP +V L ++D + ++ SF +P + N G F ++ N+ +R+D+I ++ ++ Sbjct: 354 FIWKISDFTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQWPFNQKVTLMLLDH-----NNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKMEAKNSYVRDDAIFIKAIVD 497
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q28DL4|TRAF6_XENTR (TNF receptor-associated factor 6 OS=Xenopus tropicalis OX=8364 GN=traf6 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.503e-15 Identity = 50/154 (32.47%), Postives = 80/154 (51.95%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPN-GANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERN-EGIGDNEFISFKELHLL--NNILRNDSILLRCSINA 1231 FIW+IN+F+ E + + S+ FYT GYKLCL ++ + Q Y+ F M+G YD LPWP++ + LSI+DQ + + E+L +F +P RN +G G +++F L L ++ND++L+RCS+ Sbjct: 389 FIWRINNFNSLLKNQEEERPVVIHSQGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLQGTIRLSILDQSEGVAMQDQEEVMDTKPELL--AFQRPTVARNPKGFG---YVTFMHLQALKQRQYVKNDTLLVRCSVTT 537
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Match: sp|Q6DJN2|TRF6B_XENLA (TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 6.901e-15 Identity = 50/153 (32.68%), Postives = 79/153 (51.63%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPN-GANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERN-EGIGDNEFISFKELHLL--NNILRNDSILLRCSIN 1228 FIWKI FS Q E + + S FYT GYKLCL ++ + Q Y+ F M+G YD LPWP+ + LSI+DQ + + ++L +F +P +RN +G G +++F L+ L ++ND++ +RC++N Sbjct: 387 FIWKIKGFSGLQKTQEEEKPVVIHSPGFYTGKPGYKLCLRLHLQLPSAQRCANYISLFVHTMQGEYDSLLPWPLHGTIRLSILDQSEGAIIQDQEEVMDTKPDLL--AFQRPTTQRNPKGFG---YVTFMHLNTLKQRQYVKNDTLFVRCAVN 534
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A2D4HS59 (TNF receptor-associated factor OS=Micrurus lemniscatus lemniscatus OX=129467 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.132e-20 Identity = 90/366 (24.59%), Postives = 167/366 (45.63%), Query Frame = 2 Query: 176 LLCTCCRKLIIDPRKASCGCRFCENCSQKPSKTDNK------CPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLENITGIIE----NLQKYAFRSM--EIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYA---ILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 LLC C L+++P++A CG R+C C + + + C N + HS+ N +D + + CPN +C++ L+ +HL C + + + +N T I E N +K A S+ I + E + +++ + + ++RR +++ +++TL+ +C + E LK + N+ + A IWK+ +FS+ + + S+FS AF TH GY+L + + P+G G +L F + KGPYDD LPWP + +V S++D + + + SF +P + N G F + E + N L++D++ L+ +++ Sbjct: 9 LLCQACGFLLVNPQQAECGHRYCRRCVKGLFRDSERIVSCLTCKNVLHLKEFHSDKAAENDALDTQ---------IACPNFDCRWTGTLKSYQEHL--CHP-EVPIGTTKNATLIPEDQNENKEKEAHWSVTAPIMGGPSLNIEAVHLRMEALELMVASLRRQLNQQVSNVKTLQ---HCCSQYEELLKISQETQNSPHGTKGSGPSAQELASTDGTLIWKVENFSKLLKDAKSGKRHSIFSLAFATHPFGYRLYVRLYPDGDGVGKGSHLSVFLALAKGPYDDILPWPFRQKVTFSLLDPT----RRKSPLTETFLPDPHSTSFQQPHQKLNVASGSPLFANHVE---IPNYLKDDTLFLKIAVD 352
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A402FGI5 (TNF receptor-associated factor OS=Paroedura picta OX=143630 GN=parPi_0017878 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.139e-19 Identity = 74/298 (24.83%), Postives = 128/298 (42.95%), Query Frame = 2 Query: 152 PIQPIDNV-LLCTCCRKLIIDPRKASCGCRFCENCSQKPSKTDNKCPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEK----KDKCVYSLENITGIIENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVD 1030 P+ P+ N LLC C L+I P++A CG R+C C ++ + +K L + F D EV CPN C + L+ DH+ E + +L + + E + ++ E E + ++S + +V++RR ++ +++L+ C + + LK + + S I +WK+ +FS+ + SV+S F TH GY LC+ + P+G G +L F + +GPYDD LPWP + +V ++D Sbjct: 2 PVDPVANAGLLCQACGFLLIAPQQAECGHRYCLGCVKRLFRDTDKV----LCHACRQELSPRQFHSDKAAENDALATEVACPNFGCAWSGTLKSYQDHVCPPEAPFGTAKESALALRDQEAVEEKGLTWTSKNSS-EGGSSLTTEAVVLRVESLELMVVSLRRQLNNQVAMVKSLQR---CCSQYEKLLKTTPEGHRSPKGSIPTSSELISTNGMLVWKVENFSKLLRDATSGKKRSVYSPVFATHPFGYHLCVRMYPDGDGIGKGSHLSLFLAVARGPYDDVLPWPFQQKVTFVLLD 291
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: T1DBK6 (TRAF-4 OS=Dendrocoelum lacteum OX=27895 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 8.096e-19 Identity = 67/218 (30.73%), Postives = 110/218 (50.46%), Query Frame = 2 Query: 608 LVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXX----------XXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 + +R+L +N+ +EE +N L+EEN+ LK + + + + + I + ++WKI FS+ + + ++ SEAFYT D GYK+C+ I P G G +L FF IMKG YDD LPWP K +V+++I D S K+ + + + +P+ E N G +FISF E L N L+ D++ ++ ++ A Sbjct: 242 VTELRKLEKQNKH----MEERMNILIEENQLLKATLEVMKLDLPKNSGSISRDTSLKRANKTIFRNGKYMWKIKSFSKLRENAMRGKNPTILSEAFYTSDFGYKMCMKIYPCGDGVGKGTHLSIFFVIMKGDYDDILPWPFKNKVIITIFDDFS----KSTNLSDTFKPDPKSICYQRPEEEYNIASGSPKFISFSE---LKNFLKKDTLYIQINVIA 448
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A0R3TIB8 (Uncharacterized protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS6805 PE=4 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.956e-18 Identity = 48/141 (34.04%), Postives = 77/141 (54.61%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHS--FSKPKFERNEGIGDNEFISFKELHLLNNILRN 1198 FIW+I+ + +K E + ++FS FY+H NGY++CL I PNG + GKYL F CI +G YD L WP L + L ++DQ D + + + + ++ +P ERN+ G F+ ++LHL + ++ N Sbjct: 145 FIWRIDGYGKKVEEAQQGRKATLFSSPFYSHRNGYRVCLSICPNGEQRVRGKYLSVFICICRGEYDALLSWPFSLPITLKLLDQNINPDLRQDHQVTIRPNPIPSNNAYLKRPSSERNQCFGSPRFLELEQLHLRDYVVDN 285
BLAST of TNF receptor-associated factor vs. TrEMBL
Match: A0A2I0LIG5 (TNF receptor-associated factor 2 OS=Columba livia OX=8932 GN=TRAF2 PE=4 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.022e-17 Identity = 91/360 (25.28%), Postives = 149/360 (41.39%), Query Frame = 2 Query: 179 LCTCCRKLIIDPRKASCGCRFCENCSQKP-SKTDNKCPNFHLASKLHSNIVTFNFQVDLETS---------LKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLENITGIIENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 LC+ C+ ++ P +A CG R+C C +K S KC AS + I + LETS +V L C N+ C + ++ H +C + + L G + + + + QH+ D E ++T L ++ ++L R I ++ +EE + + E T + FIWKI F+ K+ E ++FS AFYT GYK+CL + NG G +L FF +MKGP D L WP +V L ++DQ + ++ SF +P E N G F + N+ +R+D+I ++ ++ Sbjct: 33 LCSDCKNILRRPFQAQCGHRYCSYCLKKIISAGPQKC-----ASCIQEGIYEEGISI-LETSSAFPDNAARREVESLPAVCINSGCTWKGTIKEYEAHDEVCPE-----FPL-TCEGCGKKVPREKVPTEAYSRQHRLDQEKIET-LSNKVRQL---ERSIGLKDLAMAEMEEKIRNM--EASTYDGV-----------------------FIWKITEFARKRQEAITGRSPAIFSPAFYTSKYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLRWPFNQKVTLMLLDQ-----NNREHIIDAFRPDVTSSSFQRPVTEMNIASGCPLFCPVSVMEAKNSYVRDDAIFIKAIVD 346
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2a (TNF receptor-associated factor 2-like [Source:NCBI gene;Acc:103036375]) HSP 1 Score: 80.4925 bits (197), Expect = 6.696e-16 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 F+WKI+ FS+K+ + ++FS AFYT GYK+CL I NG G +L FF +M+G D L WP +V L ++DQ + ++ SF +P + N G F +L N+ +R+D+I ++ ++ Sbjct: 312 FVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQ-----NNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIVD 455
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:103028261]) HSP 1 Score: 80.4925 bits (197), Expect = 7.355e-16 Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 F+WKI+ FS ++ + ++FS AFY+ GYK+CL + NG G +L FF +M+G YD L WP +V L ++DQ + ++ SF +P E N G F +L ++ LR+D+I ++ ++ Sbjct: 384 FVWKISDFSRRRQDALAGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGSHLSLFFVVMRGKYDALLKWPFSQKVTLMLLDQ-----NNREHIIDAFRPDISSTSFQRPISEMNIASGCPLFCPLAKLAGKSSYLRDDTIFIKAIVD 527
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf2a (TNF receptor-associated factor 2-like [Source:NCBI gene;Acc:103036375]) HSP 1 Score: 80.4925 bits (197), Expect = 8.494e-16 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 F+WKI+ FS+K+ + ++FS AFYT GYK+CL I NG G +L FF +M+G D L WP +V L ++DQ + ++ SF +P + N G F +L N+ +R+D+I ++ ++ Sbjct: 425 FVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQ-----NNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDDTIFIKAIVD 568
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: traf4a (TNF receptor associated factor 4 [Source:NCBI gene;Acc:103024022]) HSP 1 Score: 79.7221 bits (195), Expect = 1.093e-15 Identity = 51/157 (32.48%), Postives = 73/157 (46.50%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNE------GIGDNEFISFKELHLLNNILRNDSILLRCSINAP 1234 IWK+N +S K E + + FS FYTH GYKL + NG G +L + ++ G YD+ L WP +V SI+DQ K + + +F KP RN G G +FIS E+ N +R+++I L+ SI P Sbjct: 310 LIWKLNDYSRKLQEAKLHNNHEFFSPPFYTHRYGYKLQVSAFLNGNGSGEGSHLSIYIRVLPGEYDNLLEWPFAYKVTFSILDQSDPSLSKPQHITETFNPDPNWKNFQKPSSSRNSLDESTLGFGYPKFISHDEIR-KRNYIRDNAIFLKASIEIP 465
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Match: ENSAMXT00000035169.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:3354744:3362219:1 gene:ENSAMXG00000029095.1 transcript:ENSAMXT00000035169.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 68.9366 bits (167), Expect = 1.432e-13 Identity = 43/148 (29.05%), Postives = 71/148 (47.97%), Query Frame = 2 Query: 785 IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 IWKI + ++ E S++S+ FYT GYK+C + NG G +L FF +M+G YD LPWP K +V L ++DQ + + SF +P E N G F++ L +++D+I ++ +++ Sbjct: 7 IWKIRDYKRRKAEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQ----GPARKHLGDAFKPDPNSSSFRRPTGEMNIASGCPLFVAQTVLE-NGTYIKDDTIFIKVTVD 149
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000002130.1 (pep scaffold:Pmarinus_7.0:GL484662:8457:12718:-1 gene:ENSPMAG00000001936.1 transcript:ENSPMAT00000002130.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 78.9518 bits (193), Expect = 3.712e-16 Identity = 70/296 (23.65%), Postives = 130/296 (43.92%), Query Frame = 2 Query: 377 LEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLE----NITGIIENLQKYAFRSMEIEEQHKTDFEFLKTNLKS--RDQELVNMRRLISENQESIQTLEEAVN--CLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 LE+ C +C + DH N+ E + V LE + + + + ++E+ QH + L ++ RD + +RR ++ +E ++ LE A+ EE + ++++ +L+T + +WKI ++ ++ E S++S+ FYT GYK+C NG G +L FF +M+G YD L WP + V LS++DQ + + T + SF +P + N G F+S L ++ L +D++ +R ++ Sbjct: 130 LELQCARLQCS-------IEDHTNMSEMLTQRVAQLEQDLSHWSTLTGSNNTRLGSTLEMLTQHNEQLQSLHVAQRAPQRDADTAALRRDMATLRERLRALEAALGNPGPCEERCHMHEQRLTMHDGLLDTAERRLQVLETAGYSGKLVWKIRDYARRKQEAASGRTLSLYSQPFYTSPFGYKMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLEWPFRRRVTLSLLDQGA----ARRHLSDTFTPDPASGSFRRPDGDMNVASGCPLFVSHVALE-GSSYLVDDTVFVRVVVD 413
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000074.1 (pep scaffold:Pmarinus_7.0:GL482142:165593:173010:-1 gene:ENSPMAG00000000066.1 transcript:ENSPMAT00000000074.1 gene_biotype:protein_coding transcript_biotype:protein_coding) HSP 1 Score: 73.559 bits (179), Expect = 2.158e-14 Identity = 42/161 (26.09%), Postives = 79/161 (49.07%), Query Frame = 2 Query: 758 YAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 + +L+T + +WKI ++ ++ + S++S+ FYT GY++C NG G +L FF +M+G YD LPWP + V L+++DQ + + + + SF +P + N G F+S L + L++D+I ++ ++ Sbjct: 315 FQVLETASYNGKLVWKIRDYARRKQDAVSGRTLSLYSQPFYTSPFGYRMCARAYLNGDGVGRGTHLSLFFVVMRGEYDALLPWPFRQRVTLTLLDQGA----ARRQLSDTFKPDPASSSFRRPTSDMNIASGCPLFVSHVALE-SASYLQDDTIFIKVVVD 470
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Match: traf6 (TNF receptor-associated factor 6 [Source:NCBI gene;Acc:554561]) HSP 1 Score: 67.781 bits (164), Expect = 1.979e-12 Identity = 51/177 (28.81%), Postives = 77/177 (43.50%), Query Frame = 2 Query: 782 FIWKINHFSE---KQLEFEFDTDG-------SVFSEAFYTHDNGYKLCLGIN-------PNGANQ----YLGK--YLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQ-----HSFSKPKFERN-EGIGDNEFISFKELHLLNNILRNDSILLRCSI 1225 F W++ FS L F +DG + S FYT GY+LCL + P GA G+ +L F +++G YD LPWP K + +S+VDQ +EM+ +F +P RN +G G F+ LH + LR+D +++RC + Sbjct: 395 FTWRVERFSRLLPGGLASGFASDGMHPDAPAVMHSSGFYTGVPGYRLCLRLQVLSGREVPAGAASPSVLLAGRQPHLALFVHLLQGDYDHRLPWPFKGRIRISVVDQCE--------RDSVHVTEMMDADPQLSAFQRPSVHRNPKGFGYMNFMDINTLH-HRSYLRDDCLVVRCEV 562
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO35237 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SM27]) HSP 1 Score: 82.8037 bits (203), Expect = 4.211e-17 Identity = 36/91 (39.56%), Postives = 52/91 (57.14%), Query Frame = 2 Query: 761 AILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQ 1033 AI F+WKI+ F+E+ E + S++S FYTH GYKLC + PNG YL F +M+G YD LPWP + + ++++DQ Sbjct: 375 AISYDGTFLWKIDKFTERYAEAKSGNATSIYSSPFYTHRFGYKLCARLFPNGDGSARDNYLSIFIALMRGEYDSILPWPFQETITITLIDQ 465
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO49464 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RG36]) HSP 1 Score: 75.485 bits (184), Expect = 1.097e-14 Identity = 41/149 (27.52%), Postives = 70/149 (46.98%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 +IWKI+ ++ + E S++S FY GYK C + PNG G +L FF +M+G +D LPWP + +V ++DQ + + + SF +P N G FIS L +R+D++ ++ +++ Sbjct: 380 YIWKIDEYTRRYQEGVSGKTPSIYSPPFYVGRYGYKACARVYPNGDGMGKGSHLSLFFVLMRGEFDALLPWPFRQKVTFKLLDQDRV-----HDIGDTFRPDPTSSSFKRPTSNMNIASGCPLFISHTNLQ-TRAYVRDDTMFIKIAVD 522
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO48773 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RI91]) HSP 1 Score: 73.9442 bits (180), Expect = 3.537e-14 Identity = 48/150 (32.00%), Postives = 77/150 (51.33%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERN-EGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIWK+++F + + ++ S FYT GYK+CL +N NG + LG+++ F +M+G +D L WP + LSI+DQ D + + L +F +P RN +G G EF +L ++N+SIL+R I+ Sbjct: 334 FIWKLDNFRQCREGSIAGLTAAIHSPPFYTSMYGYKMCLRMNLNGVDGGLGEHVSLFIHMMQGDWDGILEWPFIGRITLSILDQSDQIDSRRPISETLVAKPNLL-AFQRPTSPRNHKGYGYVEFCPIDQL-TEGQYIKNNSILVRIQIS 481
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO32851 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7STV5]) HSP 1 Score: 70.0922 bits (170), Expect = 4.785e-13 Identity = 38/151 (25.17%), Postives = 71/151 (47.02%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHS--FSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 IW+I ++ K E + ++FS F T +GY+LC + NG + G ++ F ++KG +D L WP V ++DQ + K + + +P+ E+N G +F +E+ + N ++ D+I L+ S++ Sbjct: 304 LIWRIEDYTRKMKEAKAGNTDTLFSPTFTTSKHGYRLCASVCLNGDGKGKGTHMSVFISVLKGAFDALLKWPFDYRVTFVLLDQNDDPAQRKHIRFSIKPNPCADNEPFLGRPRLEKNASFGGAKFAKHEEI-VSRNYIKEDTIFLKISVD 453
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Match: EDO38873 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBN4]) HSP 1 Score: 68.9366 bits (167), Expect = 1.177e-12 Identity = 43/151 (28.48%), Postives = 75/151 (49.67%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINAP 1234 +WKI + + K+ E S +S F+T +GYK+C I NG ++ FF IM+G +D L WP + +V L ++DQ +++ +S SF +P+ E N G F S ++L + +R+D++ L+ ++ P Sbjct: 335 LLWKITNVANKRSEATSGRVTSFYSPCFFTGPHGYKMCARIYLNGDGMGRNHHVSLFFVIMRGEFDALLRWPFRQKVTLMLLDQDNVEHVIDAFRPDPSSS-----SFQRPRAEMNIASGCPLFCSHEQL-TQHAYIRDDTMFLKIIVDKP 479
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf3 (TNF receptor associated factor 3 [Source:NCBI gene;Acc:101161601]) HSP 1 Score: 82.8037 bits (203), Expect = 9.533e-17 Identity = 97/408 (23.77%), Postives = 167/408 (40.93%), Query Frame = 2 Query: 182 CTCCRKLIIDPRKASCGCRFCENCSQKPSKTDNKCPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPN--NECQFICKLRFLADHLNICE----------------KKD-------KCVYSLENITGIIEN------LQKY------AF--------------RSMEIEEQHKTDFEFLKTNLKSRDQ---ELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPF----IWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINA 1231 C CR ++ PR+ CG RFC +C CPN + + F+ D+ ++ L+V+C + N CQ L+ + DH+N+C +K+ KC Y E+ +N LQK+ AF RS ++ H L+ L+S Q E+ ++R + + + LE+ LE + S++ ++ + +L+T + IWKI + ++ + S++S+ FYT GYK+C + NG G +L FF +M+G YD LPWP K +V L ++DQ + + SF +P E N G F+S L +++D+I ++ +++ Sbjct: 48 CEACRLVLCQPRQTECGHRFCYSCIND----ILSCPNPVCPADMEPLFKDKIFR-DVCCHREIMALKVYCRSEANGCQEQMSLQQIPDHVNVCPFFEVPCPLGKCKERMMRKEIPEHLAWKCKYR-ESTCEFCKNKMPLTELQKHKETVCPAFPVSCPNHCTSSSLPRSEKLMSSHTEKLLELELELRSLRQLRDEMESLRGTLDTVRTRLSALEQGGRASLETQLNRHDDMLSVHEIRLADMDLRFQVLETASYNGTLIWKIRDYKRRKQDAVAGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRGEYDALLPWPFKQKVTLMLMDQ----GPSRKHLGDAFKPDPSSSSFRRPVAEMNIASGCPLFVSQSVLE-SGTYIKDDTIFIKVTVDT 444
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: unm_sa808 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101155367]) HSP 1 Score: 81.2629 bits (199), Expect = 4.460e-16 Identity = 46/149 (30.87%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIW+I+ F++K+ + ++FS AFYT GYK+CL I NG G +L FF +M+G D L WP +V L ++DQ + ++ SF +P E N G F +L N+ +R+D+I ++ ++ Sbjct: 449 FIWRISDFAKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGLSDALLKWPFNQKVTLMLLDQ-----SNREHIIDAFRPDVTSSSFQRPVSEMNIASGCPLFCPLSKLDAKNSYIRDDTIFIKAIVD 592
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: ENSORLT00000020861.2 (TNF receptor-associated factor 2 [Source:NCBI gene;Acc:101167626]) HSP 1 Score: 78.5666 bits (192), Expect = 3.168e-15 Identity = 45/149 (30.20%), Postives = 74/149 (49.66%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 FIWKI+ F++K+ + ++FS AFYT GYK+CL I NG G +L FF +M+G D L WP +V L ++DQ + ++ SF +P + N G F +L N+ +R+++I ++ ++ Sbjct: 422 FIWKISDFTKKRQDAMAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHLSLFFVVMRGHSDALLKWPFNQKVTLMLLDQ-----NNREHIIDAFRPDISSSSFQRPVSDMNIASGCPLFCPLSKLDSKNSYIRDETIFIKAIVD 565
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 78.5666 bits (192), Expect = 3.198e-15 Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 F+WKI FS ++ E ++FS AFY+ GYK+CL + NG G +L FF +M+ YD L WP +V L ++DQ + ++ SF +P E N G F +L + LR+D+I ++ ++ Sbjct: 369 FVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQ-----NNREHIIDAFRPDITSTSFQRPVSEMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVD 512
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Match: traf2b (TNF receptor associated factor 2 [Source:NCBI gene;Acc:101159764]) HSP 1 Score: 78.5666 bits (192), Expect = 3.459e-15 Identity = 45/149 (30.20%), Postives = 71/149 (47.65%), Query Frame = 2 Query: 782 FIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 F+WKI FS ++ E ++FS AFY+ GYK+CL + NG G +L FF +M+ YD L WP +V L ++DQ + ++ SF +P E N G F +L + LR+D+I ++ ++ Sbjct: 376 FVWKITDFSHRRQEAVSGRAPAMFSPAFYSSKYGYKMCLRLYLNGDGTGRGTHLSLFFVVMRSKYDALLKWPFSQKVTLMLLDQ-----NNREHIIDAFRPDITSTSFQRPVSEMNIASGCPLFCPLAKLAGKSPYLRDDTIFIKAIVD 519
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000011147.1 (SMESG000011147.1) HSP 1 Score: 711.835 bits (1836), Expect = 0.000e+0 Identity = 377/382 (98.69%), Postives = 379/382 (99.21%), Query Frame = 2 Query: 89 MSVTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENCSQKPSKTDNKCPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLENITGIIENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINAP 1234 MSVTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENCS+KPSK DNKCPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLENITGIIENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVN RRLISENQESIQTLEEAVNCLLEENETLKRLINSLNNSSALVVNHSYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLF FFCIMKGPYDDNLPWPMKLEVVLSIVDQISLKD+KTFKFKYSKTSEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINAP Sbjct: 1 MSVTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENCSRKPSKIDNKCPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLENITGIIENLQKYAFRSMEIEEQHKTDFEFLKTNLKSRDQELVNTRRLISENQESIQTLEEAVNCLLEENETLKRLINSLNNSSALVVNHSYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFMFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLKDYKTFKFKYSKTSEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSINAP 382
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000015041.1 (SMESG000015041.1) HSP 1 Score: 230.335 bits (586), Expect = 2.680e-71 Identity = 144/383 (37.60%), Postives = 220/383 (57.44%), Query Frame = 2 Query: 110 LSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENCSQK-PSKTDNKCPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYSLENITGIIENLQ-KYAFRSM--------EIEEQHKTDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 +S + K + I +D LLC C++++I+ +ASCGC+ C NC ++ K + CP + +F+ + + KV + V CPN C + C+L + DH+ C + + N+ ENL R + E E+Q K + + LK L++ +QEL ++ + N+ +++L+E V L +EN+ LKRLI+ S + Y I K KPF+W++ FS KQ + + D +FS+ FY++ NGYKLCLG+ PNG + + GK+LF FFCI+ D NL WPM+ +V LSI+D +LKD K +KF Y S+ +HSFSKP+ +RN+GIGDNEFISFKEL + NI +ND+IL++C I+ Sbjct: 1 MSHVQPTQKPFNIISSTQVDEKLLCMLCQRILINADRASCGCKLCLNCCKEFMEKNRDHCPTCGFLKIENGK----DFEANHSVNSKVWRIVVKCPNIFCDYECELGAMNDHVEECFLLQQSKGATNNVDKTFENLDLANIVRGLNNKISILAENEKQGKIEMDELKQKLENCNQELNYFKKQLDTNELFLESLQETVENLKDENKDLKRLIDKQGLSVITLTPT-YDIHKPKPFLWRVTEFSRKQQDAKLDRKTIIFSDPFYSNYNGYKLCLGMYPNGVSNFEGKFLFVFFCILPSQNDGNLSWPMRHQVALSILDHNTLKDHKVYKFAYFSESKSCEHSFSKPESDRNDGIGDNEFISFKELSSMKNIFKNDTILIKCVID 378
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000026004.1 (SMESG000026004.1) HSP 1 Score: 144.05 bits (362), Expect = 1.034e-38 Identity = 112/393 (28.50%), Postives = 189/393 (48.09%), Query Frame = 2 Query: 95 VTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENCSQKPSKTDNK-CPNFHLASKLHSNIVTFNFQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKK-----------DKCVYSLENITGIIENLQKYAFRSMEIEEQHK---TDFEFLKTNLKSRDQELVNMRRLISENQESIQTLEEAVNCLLEENETLKRLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 ++ ++L +W ++K + ++ I N +LC C+ ++I+ A CGCRFC +C + NK C +L + N VD ++K+ L+V CP C+ + +LR + DH IC+ + DKC S E + + ++ E+ ++K D LK+N + R QE I L+ + EEN +K+L N + +Y FIWKI FSEK + + S++SE F TH NGYK+CL ++P+G+ G +L FC+MKG +D+ L WP + V+ S+++Q + + K + S+PK +RN G+G+ FI+ KE+ ++ ND I ++C ++ Sbjct: 1 MSGSKLENVWQVVKNHNYDYVKEISNEMLCLLCKNVLINAHFAPCGCRFCLSCISEFLGGQNKMCLGNTEECQLEMLNLAENIFVDHPMNVKILKLKVKCPQRFCESVEELRKMEDHSRICKYRSVPSPFSNFGSDKCSKSEEKVDQMNNEIKLMKTHIFELRAENKLLRNDINKLKSNEEKR--------------QEEIAVLQCKCD---EENLKIKQL---NVNMISFNTKVTYG-----EFIWKIEKFSEKITHAKNGINHSIYSEPFITHRNGYKMCLELHPDGSGTGTGTHLSMCFCLMKGDFDEILEWPFRHSVIFSLLNQRTHLPHVSLIAKCRDFPNYKE--LSQPK-DRNYGMGNQLFITQKEISSNPDLANNDQIFIKCFVD 365
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070126.1 (SMESG000070126.1) HSP 1 Score: 141.354 bits (355), Expect = 3.700e-37 Identity = 122/436 (27.98%), Postives = 189/436 (43.35%), Query Frame = 2 Query: 95 VTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENC-SQKPSKTDNKCPNFHLASKLHSNIVTFN--FQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYS-------LENITGIIENLQKYAFRSMEIEEQH----KTDFEFLKTNLKSRDQELVN-----------MRRLISENQESIQTLEEAVNCLLEEN-------ETLK--------------------------RLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 + A+ IW LL +YE + + LC C ++ +P ++ CGCRFC C + + CP + ++ FN D S K++ ++V CP C + +L+ + +H I K+ C Y+ ++ I+E+L + ++ + K + L LK QEL N + L + IQ L E ++ EEN TLK ++I+ + S + PF WKI F K L+ V S FY+H NGYKLC+ I+P+G LG Y+ F +MKG +D NL WPMKL++ + +VDQIS F KF YS +H +S+P +N GIG+++FI L + I DSI+L+C + Sbjct: 1 MANAKYERIWKLLDEYEFAYDSLLSDEFLCVICNSILKNPYQSPCGCRFCMECIVDYLNDKETHCPGS--SEDCKDQLINFNGDLHADYVISRKISQVKVKCPKALCDYRSELQNIGNH--ISSHKESCPYTNIGCQYPSAHMGLIVEHLHDQIYEHGKLVTESFANLKNEVASLTLALKHSKQELENKDNLLIDLENRLNELQGTREIKIQELTETLDKCKEENVQLSSELRTLKSVSEVFSSNQKPKKGEKVQDEDLEKYKVISKNITQLIPMKPISTDHISYAPFEWKIRDF--KALKASTVIPTYVISRPFYSHVNGYKLCMTIHPSGTGIGLGSYISVFIHVMKGEFDSNLAWPMKLDLRICLVDQISDSYFVDKKFDYSSAILRNKHKYSRPFCVKNIGIGESQFIQLNALFNNSRIYLEDSIILKCFVG 430
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Match: SMESG000070126.1 (SMESG000070126.1) HSP 1 Score: 141.354 bits (355), Expect = 4.629e-37 Identity = 122/436 (27.98%), Postives = 189/436 (43.35%), Query Frame = 2 Query: 95 VTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRFCENC-SQKPSKTDNKCPNFHLASKLHSNIVTFN--FQVDLETSLKVAHLEVFCPNNECQFICKLRFLADHLNICEKKDKCVYS-------LENITGIIENLQKYAFRSMEIEEQH----KTDFEFLKTNLKSRDQELVN-----------MRRLISENQESIQTLEEAVNCLLEEN-------ETLK--------------------------RLIXXXXXXXXXXXXXXYAILKTKPFIWKINHFSEKQLEFEFDTDGSVFSEAFYTHDNGYKLCLGINPNGANQYLGKYLFTFFCIMKGPYDDNLPWPMKLEVVLSIVDQISLXXXXXXXXXXXXXXEMLQHSFSKPKFERNEGIGDNEFISFKELHLLNNILRNDSILLRCSIN 1228 + A+ IW LL +YE + + LC C ++ +P ++ CGCRFC C + + CP + ++ FN D S K++ ++V CP C + +L+ + +H I K+ C Y+ ++ I+E+L + ++ + K + L LK QEL N + L + IQ L E ++ EEN TLK ++I+ + S + PF WKI F K L+ V S FY+H NGYKLC+ I+P+G LG Y+ F +MKG +D NL WPMKL++ + +VDQIS F KF YS +H +S+P +N GIG+++FI L + I DSI+L+C + Sbjct: 27 MANAKYERIWKLLDEYEFAYDSLLSDEFLCVICNSILKNPYQSPCGCRFCMECIVDYLNDKETHCPGS--SEDCKDQLINFNGDLHADYVISRKISQVKVKCPKALCDYRSELQNIGNH--ISSHKESCPYTNIGCQYPSAHMGLIVEHLHDQIYEHGKLVTESFANLKNEVASLTLALKHSKQELENKDNLLIDLENRLNELQGTREIKIQELTETLDKCKEENVQLSSELRTLKSVSEVFSSNQKPKKGEKVQDEDLEKYKVISKNITQLIPMKPISTDHISYAPFEWKIRDF--KALKASTVIPTYVISRPFYSHVNGYKLCMTIHPSGTGIGLGSYISVFIHVMKGEFDSNLAWPMKLDLRICLVDQISDSYFVDKKFDYSSAILRNKHKYSRPFCVKNIGIGESQFIQLNALFNNSRIYLEDSIILKCFVG 456 The following BLAST results are available for this feature:
BLAST of TNF receptor-associated factor vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 2
BLAST of TNF receptor-associated factor vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 5
BLAST of TNF receptor-associated factor vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of TNF receptor-associated factor vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of TNF receptor-associated factor vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of TNF receptor-associated factor vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 5
BLAST of TNF receptor-associated factor vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024587 ID=SMED30024587|Name=TNF receptor-associated factor|organism=Schmidtea mediterranea sexual|type=transcript|length=1356bpback to top protein sequence of SMED30024587-orf-1 >SMED30024587-orf-1 ID=SMED30024587-orf-1|Name=SMED30024587-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=383bp MSVTTAQLSAIWGLLKKYEIRPIQPIDNVLLCTCCRKLIIDPRKASCGCRback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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