SMED30024578

Overview
NameSMED30024578
Smed IDSMED30024578
Length (bp)4095
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of SMED30024578 (SMED30024578) t-SNE clustered cells

Violin plots show distribution of expression levels for SMED30024578 (SMED30024578) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of SMED30024578 (SMED30024578) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for SMED30024578 (SMED30024578) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024578

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30024578 SmedASXL_077686SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30024578 dd_Smed_v4_13681_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Alignments
SMED30024578 aligns in the following genomic locations:
Alignment LocationAlignment Score
v31.000661:67213..71123 +18417
Homology
[Close]
BLAST of SMED30024578 vs. Ensembl Zebrafish
Match: BX511082.1 (pep chromosome:GRCz11:9:14291932:14297132:1 gene:ENSDARG00000113678.1 transcript:ENSDART00000183119.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX511082.1)

HSP 1 Score: 139.813 bits (351), Expect = 1.131e-32
Identity = 77/227 (33.92%), Postives = 124/227 (54.63%), Query Frame = -2 
Query: 2964 KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK-------CINLTDCVIY---LEE------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI---KNGDDHRVIKNYRCFWDY 3587
            +E +   I   L A +I PS+S        V+ K+G++R C+DYR LNA+T +  YP+P     F+ ++GA +F K+DL + YH V + E  + KT F T  G FE+  +PFGL +AP  FQ L+N VL+        + L D +I+   L+E      ++L RL + GL +  +KC F  ++  +LGHI+   G+  D EK+ A+      D  + ++ +  F ++
Sbjct:  537 REAMEKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNAITVKNTYPLPLMSSAFERLQGASFFTKLDLRNAYHLVRIREGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMLDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLENGLYVKAEKCVFHAQSVPFLGHIVSVEGMRMDPEKVQAVVDWPTPDSRKALQRFLGFANF 763

HSP 2 Score: 53.5286 bits (127), Expect = 2.119e-6
Identity = 32/100 (32.00%), Postives = 49/100 (49.00%), Query Frame = -1 
Query: 2764 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3033
            K +    W  P   K LQ FLG   +YRRFI++++ +   L  +         +     AF+ LK   VS P+L  P+ +  F+++ +AS    GAIL Q
Sbjct:  738 KVQAVVDWPTPDSRKALQRFLGFANFYRRFIRNFSQLAAPLTALTSLKTPFRWSNAAQVAFDRLKSCFVSAPILIAPDPSRQFVVEVDASEVGVGAILSQ 837
[Close]
BLAST of SMED30024578 vs. Ensembl Zebrafish
Match: BX511224.1 (pep chromosome:GRCz11:2:18017000:18022765:1 gene:ENSDARG00000113243.1 transcript:ENSDART00000186877.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX511224.1)

HSP 1 Score: 137.117 bits (344), Expect = 6.903e-32
Identity = 77/227 (33.92%), Postives = 125/227 (55.07%), Query Frame = -2 
Query: 2964 KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK-------CINLTDCVIY---LEE------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNG---DDHRVIKNYRCFWDY 3587
            +E +   I   L A +I PS+S        V+ K+G++R C+DYR LN++T +  YP+P     F+ ++GA +F K+DL + YH V +    + KT F T  G FE+  +PFGL +AP  FQ L+N VL+        + L D +I+   L+E      ++L RL + GL +  +KC F  ++ ++LGHI+   G+  D EKI A+ N    D  + ++ +  F ++
Sbjct:  537 REAMEKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVCIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSHSLQEHIQHVRRVLQRLLENGLYVKAEKCVFHAQSVQFLGHIVSVEGMRMDPEKIQAVVNWPTPDSRKALQRFLGFANF 763

HSP 2 Score: 53.5286 bits (127), Expect = 2.248e-6
Identity = 31/93 (33.33%), Postives = 47/93 (50.54%), Query Frame = -1 
Query: 2764 WRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTI-------TAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3012
            W  P   K LQ FLG   +YRRFI +++ +   L ++  ++           AF  LK   VS P+L  P+ +  F+++ +AS    GAIL Q
Sbjct:  745 WPTPDSRKALQRFLGFANFYRRFIHNFSQLAAPLTSLTSSKTPFRWSSAAEAAFSKLKGCFVSAPILIAPDPSRQFVVEVDASEVGVGAILSQ 837
[Close]
BLAST of SMED30024578 vs. Ensembl Zebrafish
Match: BX546500.1 (pep chromosome:GRCz11:23:12926092:12931693:-1 gene:ENSDARG00000086495.3 transcript:ENSDART00000122176.3 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BX546500.1)

HSP 1 Score: 136.732 bits (343), Expect = 8.282e-32
Identity = 76/227 (33.48%), Postives = 124/227 (54.63%), Query Frame = -2 
Query: 2964 KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK-------CINLTDCVIY---LEE------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI---KNGDDHRVIKNYRCFWDY 3587
            +E +   I   L A +I PS+S        V+ K+G++R C+DYR LN++T +  YP+P     F+ ++GA +F K+DL + YH V +    + KT F T  G FE+  +PFGL +AP  FQ L+N VL+        + L D +I+   L+E      ++L RL + GL +  +KC F  ++ ++LGHI+   G+  D EKI A+      D  + ++ +  F ++
Sbjct:  511 REAMEKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLENGLYVKAEKCVFHAQSVQFLGHIVSVEGMRMDPEKIQAVVDWPTPDSRKALQRFLGFANF 737

HSP 2 Score: 54.299 bits (129), Expect = 9.871e-14
Identity = 31/93 (33.33%), Postives = 48/93 (51.61%), Query Frame = -1 
Query: 2764 WRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTI-------TAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3012
            W  P   K LQ FLG   +YRRFI++++ +   L ++  ++           AF  LK   VS P+L  P+ +  F+++ +AS    GAIL Q
Sbjct:  719 WPTPDSRKALQRFLGFANFYRRFIRNFSQLAAPLTSLTSSKMPFRWSSAAEAAFSKLKGCFVSAPILIAPDPSRQFVVEVDASEVGVGAILSQ 811

HSP 3 Score: 43.8986 bits (102), Expect = 9.871e-14
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGR--RFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIF----EMNVEYRKGEEHINADALSRL 2728
            Y I  +ELL++ L++++++H+L G    F V TDH++L+ + +    N+       A   +F       + YR G ++I  DALSRL
Sbjct:  836 YDIGNRELLAVKLALEEWRHWLEGSGVPFIVWTDHKNLEYIRSAKRLNSR-----QARWALFFGRFNFTISYRPGSKNIKPDALSRL 917
[Close]
BLAST of SMED30024578 vs. Ensembl Zebrafish
Match: CR925755.2 (pep chromosome:GRCz11:17:42486740:42492668:-1 gene:ENSDARG00000116402.1 transcript:ENSDART00000183946.1 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR925755.2)

HSP 1 Score: 136.732 bits (343), Expect = 9.397e-32
Identity = 76/227 (33.48%), Postives = 124/227 (54.63%), Query Frame = -2 
Query: 2964 KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK-------CINLTDCVIY---LEE------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNG---DDHRVIKNYRCFWDY 3587
            +E +   I   L A +I PS+S        V+ K+G++R C+DYR LN++T +  YP+P     F+ ++GA +F K+DL + YH V +    + KT F T  G FE+  +PFGL +AP  FQ L+N VL+        + L D +I+   L+E      ++L RL + GL +  +KC F  ++ ++LGH +   G+  D EKI A+ N    D  + ++ +  F ++
Sbjct:  510 REAMEKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNSITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRPGDEWKTAFNTPRGHFEYCVLPFGLSNAPAVFQALVNDVLRDMIDQFIYVYLDDILIFSHSLQEHVQHVRRVLQRLLENGLYVKAEKCVFHAQSVQFLGHTVSVEGMRMDPEKIQAVVNWPTPDSRKALQRFLGFANF 736

HSP 2 Score: 53.5286 bits (127), Expect = 1.002e-13
Identity = 31/93 (33.33%), Postives = 45/93 (48.39%), Query Frame = -1 
Query: 2764 WRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTI-------TAFENLKRPLVSHPLLTIPNKNDAFILD---SNASFGAILCQ 3012
            W  P   K LQ FLG   +YRRFI+++  +   L N+  ++           AF  LK   VS P+L  P+ +  F+++   S    GAIL Q
Sbjct:  718 WPTPDSRKALQRFLGFANFYRRFIRNFRQLAAPLTNLTSSKTPFRWSNAAEAAFSKLKGCFVSAPILIAPDPSRQFVVEVDVSEVGVGAILSQ 810

HSP 3 Score: 44.2838 bits (103), Expect = 1.002e-13
Identity = 28/87 (32.18%), Postives = 49/87 (56.32%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGR--RFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIF----EMNVEYRKGEEHINADALSRL 2728
            Y I  +ELL++ L++++++H+L G    F V TDH++L+ + +    N+       A   +F      ++ YR G ++I  DALSRL
Sbjct:  835 YDIGNRELLAVKLALEEWRHWLEGSGVPFIVSTDHKNLEYIKSAKRLNSR-----QARWALFFGRFNFSISYRPGSKNIKPDALSRL 916
[Close]
BLAST of SMED30024578 vs. Ensembl Zebrafish
Match: CR855320.1 (pep chromosome:GRCz11:1:7956030:7961696:1 gene:ENSDARG00000099359.2 transcript:ENSDART00000159655.2 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CR855320.1)

HSP 1 Score: 134.035 bits (336), Expect = 6.447e-31
Identity = 75/227 (33.04%), Postives = 122/227 (53.74%), Query Frame = -2 
Query: 2964 KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK-------CINLTDCVIY---LEE------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNG---DDHRVIKNYRCFWDY 3587
            +E +   I   L A +I PS+S        V+ K+G++R C+DYR LN +T +  YP+P     F+ ++GA +F K+DL + YH V +    + K+ F T  G FE+  +PFGL +AP  FQ  +N VL+        + L D +I+   L+E      ++L RL + GL +  +KC F  ++  +LGHI+   G+  D EKI A+ N    D  + ++ +  F ++
Sbjct:  539 REAMGKYISDSLAAKIIRPSSSPAGAGFFFVKKKDGSLRPCIDYRGLNNITVKNTYPLPLMSSAFERLQGANFFTKLDLRNAYHLVRIRAGDEWKSAFNTPRGHFEYCVLPFGLSNAPAVFQAFVNDVLRDMIDQFIYVYLDDILIFSHSLQEHVQHIRRVLQRLLENGLYVKAEKCVFHAQSVPFLGHIVSVEGLRMDPEKIKAVVNWPTPDSRKALQRFLGFANF 765

HSP 2 Score: 54.6842 bits (130), Expect = 8.104e-14
Identity = 32/100 (32.00%), Postives = 49/100 (49.00%), Query Frame = -1 
Query: 2764 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTI-------TAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3033
            K +    W  P   K LQ FLG   +YRRFI++++ +   L  +  ++           AF  LK   VS P+L  P+ +  F+++ +AS    GAIL Q
Sbjct:  740 KIKAVVNWPTPDSRKALQRFLGFANFYRRFIRNFSQLAAPLTALTSSKTPFRWSSAAEAAFSKLKGCFVSAPILITPDPSRQFVVEVDASEVGVGAILSQ 839

HSP 3 Score: 43.5134 bits (101), Expect = 8.104e-14
Identity = 28/87 (32.18%), Postives = 48/87 (55.17%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGR--RFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIF----EMNVEYRKGEEHINADALSRL 2728
            Y I  +ELL++ L++++++H+L G    F V TDH++L+ + +    N+       A   +F       + YR G ++I  DALSRL
Sbjct:  864 YDIGNRELLAVKLALEEWRHWLEGSGVPFIVWTDHKNLEYIKSAKRLNSR-----QARWALFFGRFNFTISYRPGSKNIKPDALSRL 945
[Close]
BLAST of SMED30024578 vs. Ensembl Xenopus
Match: anxa6 (annexin A6 [Source:Xenbase;Acc:XB-GENE-989741])

HSP 1 Score: 166.007 bits (419), Expect = 5.349e-62
Identity = 85/257 (33.07%), Postives = 141/257 (54.86%), Query Frame = -2 
Query: 3018 KKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIE---------VKEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCIN------LTDCVIYLE---------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3716
            ++D+L  +L     +FS  P   G+  + +H + T    PI          V+ ++ + I+ +L  GVI+PS+S W  P+V+V  K+G+ R CVDYR+LN VTT   YP+P   ++ D +  AKY   +DL+  Y Q+ L  S +EK+ F T  G ++F  MPFG+ +AP TFQ+L+N +L+ +       L D  ++ +         +++  +++ AGL + P+KC       +YLGH + G  +  D  K++AI
Sbjct:  301 QQDQLRKILRSYSPMFSANP---GRTHWAEHKVDTGTQLPIRSPAYRVAEAVRPEMKSQIDEMLAFGVITPSHSPWASPVVLVPKKDGSTRFCVDYRRLNDVTTTDAYPMPRVDELLDRLGNAKYLTTLDLSRGYWQIPLAPSAQEKSAFLTPFGLYQFTVMPFGMRNAPATFQRLVNRLLEGMQDFAQAYLDDIAVFSQTWEEHLQHLQRVFAQIQDAGLTLKPEKCHLAMAEVQYLGHRVGGGQLRPDPAKVEAI 554

HSP 2 Score: 58.151 bits (139), Expect = 5.349e-62
Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = -3 
Query: 2489 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2728
            Y    KE L+I  +++K + YLYGR FTV TDH  L  L  +   N       +  L+ +   +++RKG+EH NAD LSR
Sbjct:  675 YATIEKECLAIVWALQKLQPYLYGREFTVVTDHNPLSWLQRVSGDNGK-LLRWSLLLQQYNFTIQHRKGKEHHNADGLSR 753

HSP 3 Score: 57.7658 bits (138), Expect = 5.349e-62
Identity = 32/97 (32.99%), Postives = 52/97 (53.61%), Query Frame = -1 
Query: 2761 KWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTIT---------AFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQI 3015
            +W  P   K++  FLG   YYR+FI +Y+ + + L ++   +R+ T         A   LK+ L S P+L  P+ +  FIL ++AS    GA+L Q+
Sbjct:  556 QWPIPKTQKQVLAFLGTSGYYRKFIPNYSTVAKPLTDLTSRQRSRTIVWTPECESAMNALKQALASSPVLAAPDFSRRFILQTDASNFGLGAVLSQV 652
[Close]
BLAST of SMED30024578 vs. Ensembl Xenopus
Match: ENSXETT00000006041.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:6:37317867:37322724:1 gene:ENSXETG00000003070.1 transcript:ENSXETT00000006041.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 185.267 bits (469), Expect = 1.285e-46
Identity = 103/272 (37.87%), Postives = 145/272 (53.31%), Query Frame = -2 
Query: 2973 KDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCF 3713
            K  L   L  +  LFS    D+G     KH I+ + D+P   +         ED+   +E L  AG+I  S S +  PIV+VR KNG+IRMCVDYR LN  T    Y  P  +   + + G+K+F  +DL S Y+Q+ +    KEKT F    G FEFNRMP GLC AP TFQ+LM   +  ++L + ++YL++                K+  RL+K GLK+ P+KCQF + +  Y+GH++   GI TD  KI+A+ +    R I   R F
Sbjct:  288 KSRLRKHLNEHSALFSRNDLDMGCSTSTKHKIRLREDKPFRERSRRIAPGDLEDLRKHLEELKAAGIIKESRSPYASPIVVVRKKNGSIRMCVDYRTLNQRTIPDQYTTPRIEDALNCLVGSKWFSVLDLRSGYYQLPMHPEDKEKTAFICPLGFFEFNRMPQGLCGAPATFQRLMERTVGDMHLLEVLVYLDDLIVFGRTLEEHEQRLLKVFDRLEKEGLKLSPEKCQFCQPSVNYVGHVVSAEGIATDPSKIEAVSSWPKPRTITELRSF 559
[Close]
BLAST of SMED30024578 vs. Ensembl Xenopus
Match: alkbh5 (alkB homolog 5, RNA demethylase [Source:Xenbase;Acc:XB-GENE-987580])

HSP 1 Score: 160.229 bits (404), Expect = 1.330e-40
Identity = 99/276 (35.87%), Postives = 146/276 (52.90%), Query Frame = -2 
Query: 2973 SNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKT----KVD-QPIEVKEDVNNMIEG----LLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK------CINLTDCVIYLE---------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDD-EKIDAIKNGDDHRVIKNYRCF 3725
            +N +K E+   L RN+ +FS  P   G  E +KHDI T    KV+ +P  + E     + G    +LE  VI  S+S W+ PIV+V   +G+IR C D+RKLN V+    YP+P   ++ + +  A+Y   +DL   Y QV L E  KEKT F+T  GQ+++ R+PFGL  AP TFQ++M+ +LK         L D VI+           + +L  + KAGL  +P KC    +  +YLG++I G G++     KI+ I+        K  R F
Sbjct:  196 TNSQKQEMREFLIRNRQIFSDQP---GLTEMIKHDIITGPGVKVNVRPYRIPEARRQAVAGEIKRMLELDVIEESHSEWSSPIVLVPKPDGSIRFCNDFRKLNEVSKFDAYPMPRVDELIERLGQARYITTLDLTKGYWQVPLTEGAKEKTAFSTPEGQWQYKRLPFGLHGAPATFQRMMDRILKPHRGYASAYLDDVVIFSPDWESHLPRVQAVLDSIWKAGLTANPKKCAMGLEEARYLGYVI-GRGVVKPQVSKIEGIQQWPRPNSKKQVRAF 467
[Close]
BLAST of SMED30024578 vs. Ensembl Xenopus
Match: ENSXETT00000015952.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:8:63280736:63282565:1 gene:ENSXETG00000009808.1 transcript:ENSXETT00000015952.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 133.265 bits (334), Expect = 2.326e-31
Identity = 69/198 (34.85%), Postives = 111/198 (56.06%), Query Frame = -2 
Query: 3147 KDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILL 3713
            K  L + L   + +FST   D+G  +  +H I+     P   +         ED+   ++ +   G+I+ S S +  PIVIVR K+G+IR+CVDYR LN  T    Y +P  ++  + + G+K+F  +DL S Y+QV +    +EKT F    G ++F RMP G+C AP TFQ+LM  +L  ++  +C++YL++ I+ 
Sbjct:  386 KQRLSNGLLERRQVFSTDEMDVGCAKSTQHTIRLSDSTPFRERPRRVPPKDREDLQRTLQEMKRRGIIADSRSPYASPIVIVRKKDGSIRLCVDYRTLNRRTVPDQYTLPRIEETLEALNGSKWFTVMDLRSGYYQVPMASEDQEKTAFICPLGFYQFTRMPQGICGAPATFQRLMEKMLGDLSPRECLVYLDDIIVF 583
[Close]
BLAST of SMED30024578 vs. Ensembl Xenopus
Match: ENSXETT00000024810.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:KV464121.1:1437:3201:1 gene:ENSXETG00000014958.1 transcript:ENSXETT00000024810.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 61.2326 bits (147), Expect = 1.184e-30
Identity = 31/103 (30.10%), Postives = 54/103 (52.43%), Query Frame = -2 
Query: 3012 FEFNRMPFGLCSAPVTFQKLMNIVLKCIN------LTDCVIYLE---------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3275
            F+   MPFG+ +AP TFQ+++N +L+         L D  I+           +++L R+++AGL + P KC F     +YLGH +    ++ +  K++ I N
Sbjct:    4 FKLTVMPFGMKNAPATFQRVVNQLLEGCQEFAQAYLDDIAIFSNTWEEHVQHLQRVLERIRQAGLTLKPGKCHFGMAEVQYLGHRVGSGRVMPEPAKVEVIVN 106

HSP 2 Score: 58.5362 bits (140), Expect = 1.184e-30
Identity = 34/104 (32.69%), Postives = 51/104 (49.04%), Query Frame = -1 
Query: 2737 WRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERT---------ITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGHAVSP 3012
            W  P+  K++  FLG   YYRRFI +Y+ I + L ++    R           TA   LK  LV+ P+L  P+ +  FI+ ++AS    GA+L Q+       P
Sbjct:  107 WPTPTTQKQVLAFLGTAGYYRRFIPNYSAIAKPLTDLTSKRRPRVVTWTPECATAMSALKSALVNAPVLYAPDFSRGFIVHTDASTYGIGAVLSQVDEKGGEHP 210

HSP 3 Score: 56.225 bits (134), Expect = 1.184e-30
Identity = 31/80 (38.75%), Postives = 42/80 (52.50%), Query Frame = -3 
Query: 2489 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2728
            Y    KE L+I  ++KK + YL+G  FTV TDH  L  L  +   N       +  L+ F   +++RKG  H NAD LSR
Sbjct:  225 YATIEKECLAIVWALKKLQPYLFGSAFTVVTDHNPLSWLQRVSGDNGK-LLRWSLALQQFNFTIQHRKGSHHGNADGLSR 303
[Close]
BLAST of SMED30024578 vs. UniProt/SwissProt
Match: sp|P04323|POL3_DROME (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 5.118e-63
Identity = 96/266 (36.09%), Postives = 146/266 (54.89%), Query Frame = -2 
Query: 3015 SNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK--------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGA-----IRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILL----------------RLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIK 3725
            +N +K  L +LL +  D+       L      KH I TK + P+  K        ++V + I+ +L  G+I  SNS +N PI +V  K  A      R+ +DYRKLN +T    +PIPN  +I   +    YF  IDLA  +HQ+E++     KT F+TKHG +E+ RMPFGL +AP TFQ+ MN +L+ +    C++YL++ I+                 +L KA LK+  DKC+FL++   +LGH++  +GI  + EKI+AI+
Sbjct:  166 NNEEKQRLCALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYSKYSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

HSP 2 Score: 62.3882 bits (150), Expect = 5.118e-63
Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2728
            Y    KELL+I  + K F+HYL GR F + +DHQ L  L  +  PN+        +L  F+ +++Y KG+E+  ADALSR+
Sbjct:  545 YSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMKDPNSK-LTRWRVKLSEFDFDIKYIKGKENCVADALSRI 624

HSP 3 Score: 60.4622 bits (145), Expect = 5.118e-63
Identity = 38/110 (34.55%), Postives = 59/110 (53.64%), Query Frame = -1 
Query: 2740 RKNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTI--------TAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGHAVS 3036
             K    +K+  P+  KE++ FLGL  YYR+FI ++ADI + +   LK    I        +AF+ LK  +   P+L +P+    F L ++AS    GA+L   Q+GH +S
Sbjct:  425 EKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLS--QDGHPLS 532
[Close]
BLAST of SMED30024578 vs. UniProt/SwissProt
Match: sp|P20825|POL2_DROME (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.778e-62
Identity = 88/235 (37.45%), Postives = 132/235 (56.17%), Query Frame = -2 
Query: 3018 LKHDIKTKVDQPIEVKE---------DVNNMIEGLLEAGVISPSNSAWNFPIVIVRTK---NGA--IRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILL----------------RLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3632
            +KH + T  + PI  K+         +V N ++ +L  G+I  SNS +N P  +V  K   +GA   R+ +DYRKLN +T    YPIPN  +I   +   +YF  IDLA  +HQ+E++E    KT F+TK G +E+ RMPFGL +AP TFQ+ MN +L+ +    C++YL++ I+                 +L  A LK+  DKC+FL+K   +LGHI+  +GI  +  K+ AI
Sbjct:  195 IKHVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAI 429

HSP 2 Score: 70.0922 bits (170), Expect = 4.778e-62
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = -1 
Query: 2740 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERT---------ITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGHAVS 3003
            P+ DKE++ FLGL  YYR+FI +YADI + + + LK +RT         I AFE LK  ++  P+L +P+    F+L ++AS    GA+L   QNGH +S
Sbjct:  435 PTKDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLK-KRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLALGAVLS--QNGHPIS 531

HSP 3 Score: 59.6918 bits (143), Expect = 4.778e-62
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2728
            Y    KELL+I  + K F+HYL GR+F + +DHQ L+ L NL  P           L  ++  ++Y KG+E+  ADALSR+
Sbjct:  544 YSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPLRWLHNLKEPGAKLERW-RVRLSEYQFKIDYIKGKENSVADALSRI 623
[Close]
BLAST of SMED30024578 vs. UniProt/SwissProt
Match: sp|P10394|POL4_DROME (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 9.747e-51
Identity = 83/292 (28.42%), Postives = 147/292 (50.34%), Query Frame = -2 
Query: 3012 Y*IFRIHKLGRIKTLIEKLDSN---LKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGA------IRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILL----------------RLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3785
            Y + + +   R KT++ +L  N   L K +L ++     D+F+     +      K  ++ K D+P+  K         E++   ++ L++  ++ PS S +N P+++V  K+         R+ +DYR++N       +P+P    I D +  AKYF  +DL S +HQ+EL+E  ++ T F+T +G + F R+PFGL  AP +FQ++M I    I  +   +Y+++ I++                + ++  LK+ P+KC F      +LGH     GIL DD+K D I+N
Sbjct:  249 YNVVQANSEHRNKTVLSQLKKNFPELFKSQLENICSEYIDIFALESEPITVNNLYKQQLRLKDDEPVYTKNYRSPHSQVEEIQAQVQKLIKDKIVEPSVSQYNSPLLLVPKKSSPNSDKKKWRLVIDYRQINKKLLADKFPLPRIDDILDQLGRAKYFSCLDLMSGFHQIELDEGSRDITSFSTSNGSYRFTRLPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQN 540

HSP 2 Score: 58.5362 bits (140), Expect = 9.747e-51
Identity = 31/78 (39.74%), Postives = 52/78 (66.67%), Query Frame = -3 
Query: 2486 TRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2719
            T +EL +I+ ++  F+ Y+YG+ FTV+TDH+ L  L ++ +P++    +   ELE +   VEY KG+++  ADALSR+
Sbjct:  659 TEQELAAIHWAIIHFRPYIYGKHFTVKTDHRPLTYLFSMVNPSSKLTRI-RLELEEYNFTVEYLKGKDNHVADALSRI 735

HSP 3 Score: 48.521 bits (114), Expect = 9.747e-51
Identity = 30/88 (34.09%), Postives = 47/88 (53.41%), Query Frame = -1 
Query: 2743 FLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGHAV 2976
            F+  C YYRRFIK++AD  + +  + K        +    AF +LK  L++  LL  P+ +  F + ++AS    GA+L Q  NGH +
Sbjct:  553 FVAFCNYYRRFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTDASKQACGAVLTQNHNGHQL 640
[Close]
BLAST of SMED30024578 vs. UniProt/SwissProt
Match: sp|Q8I7P9|POL5_DROME (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.330e-32
Identity = 82/230 (35.65%), Postives = 127/230 (55.22%), Query Frame = -2 
Query: 2973 PIEVKEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTK---NG--AIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLK------CINLTDCVIYLEEK----------ILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCF 3599
            P+ ++ +V   I+ LL+ G+I PSNS +N PI IV  K   NG    RM VD+++LN VT    YPIP+       +  AKYF  +DL S +HQ+ ++ES   KT F+T +G++EF R+PFGL +AP  FQ++++ +L+      C    D +I   E           +L  L KA L+++ +K  FL    ++LG+I+  +GI  D +K+ AI        +K  + F
Sbjct:  132 PVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRF 361

HSP 2 Score: 55.0694 bits (131), Expect = 6.721e-13
Identity = 36/116 (31.03%), Postives = 55/116 (47.41%), Query Frame = -1 
Query: 2752 RKNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK------------------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNG 3036
            +K R   +   P+  KEL+ FLG+  YYR+FI+DYA + + L N+ +                  +E  + +F +LK  L S  +L  P     F L ++AS    GA+L Q   G
Sbjct:  341 KKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQG 456

HSP 3 Score: 43.1282 bits (100), Expect = 6.721e-13
Identity = 31/91 (34.07%), Postives = 46/91 (50.55%), Query Frame = -3 
Query: 2483 SCSKS*HRYCITRKELLSIYLSVKKFKHYLYGR-RFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLP 2752
            S +K+   Y    KE+L+I  S+   + YLYG     V TDHQ L   L   + N        A +E +   + Y+ G+ ++ ADALSR+P
Sbjct:  467 SLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAK-LKRWKARIEEYNCELIYKPGKSNVVADALSRIP 556
[Close]
BLAST of SMED30024578 vs. UniProt/SwissProt
Match: sp|Q7LHG5|YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.234e-28
Identity = 84/258 (32.56%), Postives = 129/258 (50.00%), Query Frame = -2 
Query: 2958 PTDLGKCEFLKHDIKTKVD------QPIEVKE----DVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIV---LKCIN--LTDCVIYLE---------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCFWDYVN 3659
            P D+     +KHDI+ K        QP  V E    ++N +++ LL+   I PS S  + P+V+V  K+G  R+CVDYR LN  T    +P+P    +   I  A+ F  +DL S YHQ+ +E   + KT F T  G++E+  MPFGL +AP TF + M      L+ +N  L D +I+ E         + +L RLK   L +   KC+F  +  ++LG+ I    I     K  AI++    + +K  + F   +N
Sbjct:  602 PADINNIP-VKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMIN 858

HSP 2 Score: 44.2838 bits (103), Expect = 1.106e-9
Identity = 27/74 (36.49%), Postives = 43/74 (58.11%), Query Frame = -3 
Query: 2489 ELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2710
            ELL I  ++  F++ L+G+ FT+RTDH SL  L N + P          +L  ++  +EY  G +++ ADA+SR
Sbjct:  962 ELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARR-VQRWLDDLATYDFTLEYLAGPKNVVADAISR 1034

HSP 3 Score: 42.743 bits (99), Expect = 1.106e-9
Identity = 30/91 (32.97%), Postives = 45/91 (49.45%), Query Frame = -1 
Query: 2755 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNML-----KNERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQN 3003
            P   K+ Q FLG+  YYRRFI + + I Q +   +       E+   A E LK  L + P+L   N    + L ++AS    GA+L ++ N
Sbjct:  844 PKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQWTEKQDKAIEKLKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDN 934
[Close]
BLAST of SMED30024578 vs. TrEMBL
Match: A0A0V1NDZ8 (Transposon Ty3-I Gag-Pol polyprotein OS=Trichinella sp. T8 OX=92180 GN=TY3B-I PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 3.809e-85
Identity = 101/267 (37.83%), Postives = 162/267 (60.67%), Query Frame = -2 
Query: 3015 IEKLDSNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIK 3740
            +E+LD++  ++ L S+L++ +   +T   D+G  E   H I T+   P++V         + DV  M+  +L   VI P+NS W+ PIVIVR K+G+ R CVD+R+LN VTT+  +P+P      + + GA++F  +D +S Y Q+ +EE+ + KT F+T  G ++F  MPFGLC+AP TFQ+LM++ L+ +  + C+ YL+                E++L R+ + GLK+ P KC  +RK  ++LGH++  NGI TD+EKI A+K
Sbjct:  582 LEELDAH-SRNALRSVLWKYRRCIATSDEDIGHTELASHRIDTRNAAPVKVPPRRLPPAQRPDVQRMVTDMLNRNVIEPANSPWSAPIVIVRKKDGSPRFCVDFRRLNDVTTKDAHPLPRIDDTLEALSGARWFSTLDFSSGYWQIPVEEADRPKTAFSTPFGLYQFRVMPFGLCNAPATFQRLMDVALRGLTWSSCLAYLDDIIVFGRTAREHTDRLERVLQRIAETGLKLKPQKCHLMRKTVRFLGHVLSENGISTDEEKIRAVK 847

HSP 2 Score: 80.4925 bits (197), Expect = 3.809e-85
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -3 
Query: 2489 IMSNSKWSCSKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2773
            +++ +  + +K+  RYC+TRKELL++  S+K+F+ YLYG++F VRTDH  L+ L N   P          +L  ++ NV +R G  H NADALSR
Sbjct:  949 VVAYASRTLTKAERRYCVTRKELLALVWSIKEFRPYLYGQQFDVRTDHSCLRWLRNFKEPEGQ-VARWLEQLAEYDFNVLHRPGRAHCNADALSR 1042

HSP 3 Score: 72.7886 bits (177), Expect = 3.809e-85
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -1 
Query: 2749 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGH 3033
            K R  K+W  P C  E++ FLGL  YYRRFIK+++ +   L  +L+            TAF+ LK  L + P+LT P+ N  FI+D +AS    GA+L Q  +G+
Sbjct:  842 KIRAVKEWPTPCCPSEVRQFLGLASYYRRFIKNFSMVSAPLNALLRKGSHWKWTAECQTAFDQLKHMLCTAPVLTFPDFNVPFIVDVDASAEGIGAVLSQPSHGN 946
[Close]
BLAST of SMED30024578 vs. TrEMBL
Match: A0A0V1CIR6 (Transposon Ty3-G Gag-Pol polyprotein OS=Trichinella britovi OX=45882 GN=TY3B-G PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 4.036e-85
Identity = 101/267 (37.83%), Postives = 162/267 (60.67%), Query Frame = -2 
Query: 3015 IEKLDSNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIK 3740
            +E+LD++  ++ L S+L++ +   +T   D+G  E   H I T+   P++V         + DV  M+  +L   VI P+NS W+ PIVIVR K+G+ R CVD+R+LN VTT+  +P+P      + + GA++F  +D +S Y Q+ +EE+ + KT F+T  G ++F  MPFGLC+AP TFQ+LM++ L+ +  + C+ YL+                E++L R+ + GLK+ P KC  +RK  ++LGH++  NGI TD+EKI A+K
Sbjct:  582 LEELDAH-SRNALRSVLWKYRRCIATSDEDIGHTELASHRIDTRNAAPVKVPPRRLPPAQRPDVQRMVTDMLNRNVIEPANSPWSAPIVIVRKKDGSPRFCVDFRRLNDVTTKDAHPLPRIDDTLEALSGARWFSTLDFSSGYWQIPVEEADRPKTAFSTPFGLYQFRVMPFGLCNAPATFQRLMDVALRGLTWSSCLAYLDDIIVFGRTAREHTDRLERVLQRIAETGLKLKPQKCHLMRKTVRFLGHVLSENGISTDEEKIRAVK 847

HSP 2 Score: 80.4925 bits (197), Expect = 4.036e-85
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -3 
Query: 2489 IMSNSKWSCSKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2773
            +++ +  + +K+  RYC+TRKELL++  S+K+F+ YLYG++F VRTDH  L+ L N   P          +L  ++ NV +R G  H NADALSR
Sbjct:  949 VVAYASRTLTKAERRYCVTRKELLALVWSIKEFRPYLYGQQFDVRTDHSCLRWLRNFKEPEGQ-VARWLEQLAEYDFNVLHRPGRAHCNADALSR 1042

HSP 3 Score: 72.7886 bits (177), Expect = 4.036e-85
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -1 
Query: 2749 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGH 3033
            K R  K+W  P C  E++ FLGL  YYRRFIK+++ +   L  +L+            TAF+ LK  L + P+LT P+ N  FI+D +AS    GA+L Q  +G+
Sbjct:  842 KIRAVKEWPTPCCPSEVRQFLGLASYYRRFIKNFSMVSAPLNALLRKGSHWKWTAECQTAFDQLKHMLCTAPVLTFPDFNVPFIVDVDASAEGIGAVLSQPSHGN 946
[Close]
BLAST of SMED30024578 vs. TrEMBL
Match: A0A0V0TPL4 (Transposon Ty3-I Gag-Pol polyprotein OS=Trichinella murrelli OX=144512 GN=TY3B-I PE=4 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 4.070e-85
Identity = 101/267 (37.83%), Postives = 162/267 (60.67%), Query Frame = -2 
Query: 3015 IEKLDSNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIK 3740
            +E+LD++  ++ L S+L++ +   +T   D+G  E   H I T+   P++V         + DV  M+  +L   VI P+NS W+ PIVIVR K+G+ R CVD+R+LN VTT+  +P+P      + + GA++F  +D +S Y Q+ +EE+ + KT F+T  G ++F  MPFGLC+AP TFQ+LM++ L+ +  + C+ YL+                E++L R+ + GLK+ P KC  +RK  ++LGH++  NGI TD+EKI A+K
Sbjct:  582 LEELDAH-SRNALRSVLWKYRRCIATSDEDIGHTELASHRIDTRNAAPVKVPPRRLPPAQRPDVQRMVTDMLNRNVIEPANSPWSAPIVIVRKKDGSPRFCVDFRRLNDVTTKDAHPLPRIDDTLEALSGARWFSTLDFSSGYWQIPVEEADRPKTAFSTPFGLYQFRVMPFGLCNAPATFQRLMDVALRGLTWSSCLAYLDDIIVFGRTAREHTDRLERVLQRIAETGLKLKPQKCHLMRKTVRFLGHVLSENGISTDEEKIRAVK 847

HSP 2 Score: 80.4925 bits (197), Expect = 4.070e-85
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -3 
Query: 2489 IMSNSKWSCSKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2773
            +++ +  + +K+  RYC+TRKELL++  S+K+F+ YLYG++F VRTDH  L+ L N   P          +L  ++ NV +R G  H NADALSR
Sbjct:  949 VVAYASRTLTKAERRYCVTRKELLALVWSIKEFRPYLYGQQFDVRTDHSCLRWLRNFKEPEGQ-VARWLEQLAEYDFNVLHRPGRAHCNADALSR 1042

HSP 3 Score: 72.7886 bits (177), Expect = 4.070e-85
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -1 
Query: 2749 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGH 3033
            K R  K+W  P C  E++ FLGL  YYRRFIK+++ +   L  +L+            TAF+ LK  L + P+LT P+ N  FI+D +AS    GA+L Q  +G+
Sbjct:  842 KIRAVKEWPTPCCPSEVRQFLGLASYYRRFIKNFSMVSAPLNALLRKGSHWKWTAECQTAFDQLKHMLCTAPVLTFPDFNVPFIVDVDASAEGIGAVLSQPSHGN 946
[Close]
BLAST of SMED30024578 vs. TrEMBL
Match: A0A0V0RE01 (Retrovirus-related Pol polyprotein from transposon OS=Trichinella nelsoni OX=6336 GN=POL PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.104e-85
Identity = 100/267 (37.45%), Postives = 162/267 (60.67%), Query Frame = -2 
Query: 3015 IEKLDSNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIK 3740
            +E++D++  ++ L S+L++ +   +T   D+G  E   H I T+   P++V         + DV  M+  +L   VI P+NS W+ PIVIVR K+G+ R CVD+R+LN VTT+  +P+P      + + GA++F  +D +S Y Q+ +EE+ + KT F+T  G ++F  MPFGLC+AP TFQ+LM++ L+ +  + C+ YL+                E++L R+ + GLK+ P KC  +RK  ++LGH++  NGI TD+EKI A+K
Sbjct:  573 LEEVDAH-SRNALRSVLWKYRRCIATSDEDIGHTELASHRIDTRNAAPVKVPPRRLPPAQRPDVQRMVTDMLNRNVIEPANSPWSAPIVIVRKKDGSPRFCVDFRRLNDVTTKDAHPLPRIDDTLEALSGARWFSTLDFSSGYWQIPVEEADRPKTAFSTPFGLYQFRVMPFGLCNAPATFQRLMDVALRGLTWSSCLAYLDDIIVFGRTAREHTDRLERVLQRIAETGLKLKPQKCHLMRKTVRFLGHVLSENGISTDEEKIRAVK 838

HSP 2 Score: 80.4925 bits (197), Expect = 4.104e-85
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -3 
Query: 2489 IMSNSKWSCSKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2773
            +++ +  + +K+  RYC+TRKELL++  S+K+F+ YLYG++F VRTDH  L+ L N   P          +L  ++ NV +R G  H NADALSR
Sbjct:  940 VVAYASRTLTKAERRYCVTRKELLALVWSIKEFRPYLYGQQFDVRTDHSCLRWLRNFKEPEGQ-VARWLEQLAEYDFNVLHRPGRAHCNADALSR 1033

HSP 3 Score: 73.9442 bits (180), Expect = 4.104e-85
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -1 
Query: 2749 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGH 3033
            K R  K+W  P C  E++ FLGL  YYRRFIK+++ +   L  +L+            TAF+ LK  L + P+LT P+ N  FI+D +AS    GA+L Q  +G+
Sbjct:  833 KIRAVKEWATPCCPSEVRQFLGLASYYRRFIKNFSTVSAPLNALLRKGSHWKWTAECQTAFDQLKHMLCTAPVLTFPDFNVPFIVDVDASAEGIGAVLSQPSHGN 937
[Close]
BLAST of SMED30024578 vs. TrEMBL
Match: A0A0V1DU22 (Retrovirus-related Pol polyprotein from transposon OS=Trichinella pseudospiralis OX=6337 GN=POL PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.233e-84
Identity = 99/267 (37.08%), Postives = 161/267 (60.30%), Query Frame = -2 
Query: 3015 IEKLDSNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIK 3740
            +E++D++  ++ L S+L++ +   +T   D+G  E   H I T+   P++V         + DV  M+  +L   VI P+NS W+ PIVIVR K+G+ R CVD+R+LN VTT+  +P+P      + + GA++F  +D +S Y Q+ +EE+ + KT F+T  G ++F  MPFGLC+AP TFQ+LM++ L+ +  + C+ YL+                E++L R+ + GLK+ P KC  +RK  ++LGH++  NGI TD+EK  A+K
Sbjct:  573 LEEVDAH-SRNALRSVLWKYRRCIATSDEDMGHTELASHRIDTRNAAPVKVPPRRLPPAQRPDVQRMVTDMLNRNVIEPANSPWSAPIVIVRKKDGSPRFCVDFRRLNDVTTKDAHPLPRIDDTLEALSGARWFSTLDFSSGYWQIPVEEADRPKTAFSTPFGLYQFRVMPFGLCNAPATFQRLMDVALRGLTWSSCLAYLDDIIVFGRTAREHTDRLERVLQRIAETGLKLKPQKCHLMRKTVRFLGHVLSENGISTDEEKTRAVK 838

HSP 2 Score: 80.4925 bits (197), Expect = 1.233e-84
Identity = 40/95 (42.11%), Postives = 60/95 (63.16%), Query Frame = -3 
Query: 2489 IMSNSKWSCSKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSR 2773
            +++ +  + +K+  RYC+TRKELL++  S+K+F+ YLYG++F VRTDH  L+ L N   P          +L  ++ NV +R G  H NADALSR
Sbjct:  940 VVAYASRTLTKAERRYCVTRKELLALVWSIKEFRPYLYGQQFDVRTDHSCLRWLRNFKEPEGQ-VARWLEQLAEYDFNVLHRPGRAHCNADALSR 1033

HSP 3 Score: 73.9442 bits (180), Expect = 1.233e-84
Identity = 41/105 (39.05%), Postives = 59/105 (56.19%), Query Frame = -1 
Query: 2749 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNGH 3033
            K R  K+W  P C  E++ FLGL  YYRRFIK+++ +   L  +L+            TAF+ LK  L + P+LT P+ N  FI+D +AS    GA+L Q  +G+
Sbjct:  833 KTRAVKEWATPCCPSEVRQFLGLASYYRRFIKNFSMVSAPLNALLRKGSHWKWTAECQTAFDKLKHMLCTAPVLTFPDFNLPFIVDVDASAEGIGAVLSQPSHGN 937
[Close]
BLAST of SMED30024578 vs. Ensembl Cavefish
Match: ENSAMXT00000048272.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000106.1:219951:223307:1 gene:ENSAMXG00000032559.1 transcript:ENSAMXT00000048272.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 208.764 bits (530), Expect = 2.404e-54
Identity = 109/287 (37.98%), Postives = 156/287 (54.36%), Query Frame = -2 
Query: 2922 ELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPI---------EVKEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILL----------------RLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCFWDYVNITGVL*RIMQIF 3707
            EL  LL    D+FSTGPTDLG+   ++HDI+     P+         E + + +  I+  LE+G+ SPSNS+W  PIV+VR K+   R+CVDYR LNA T +  YP+P  +   + +  AK+F  +DLAS Y QV L    ++   F ++ G F +N MPFGLC+AP TFQ+LM+ VL  +    C++YL++ ILL                R ++A LK+ P KC   R+   YLGHI+   GI TD EK+  ++       +   R F   V +     R +Q F
Sbjct:   42 ELAQLLSTYGDVFSTGPTDLGRTSLVQHDIQLLPGPPVKQQPRRMAFEKQIESDAQIQQSLESGLASPSNSSWASPIVLVRKKDQTYRLCVDYRALNARTVKDAYPLPRIQDTLETLSTAKWFSTLDLASGYWQVALTPRARKAVAFCSRKGLFTWNVMPFGLCNAPATFQRLMDRVLAGLQWETCLVYLDDIILLGKDVPEILQRLAQVFDRFRQANLKLKPTKCCLFRREVSYLGHIVSAQGIATDPEKVRKVQQWPQPTCVSEVRQF---VGLAAYYRRFVQDF 325

HSP 2 Score: 80.1073 bits (196), Expect = 1.314e-28
Identity = 41/104 (39.42%), Postives = 61/104 (58.65%), Query Frame = -1 
Query: 2752 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNERTI-------TAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNG 3033
            K R  ++W +P+C  E++ F+GL  YYRRF++D+A I + L+ + K            TAFE LK  L S P+L  P  +   ILD++AS    GA+L Q+Q+G
Sbjct:  292 KVRKVQQWPQPTCVSEVRQFVGLAAYYRRFVQDFATIAKPLHELTKKHVRFQWTPECQTAFEELKSSLTSTPVLGYPRDHGNLILDTDASNFGIGAVLSQVQDG 395

HSP 3 Score: 67.781 bits (164), Expect = 1.314e-28
Identity = 37/100 (37.00%), Postives = 52/100 (52.00%), Query Frame = -3 
Query: 2447 SKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLPHYEQCALKHGDP 2746
            S +   YC TR+ELL++    + F+ YL GR F VR+DH SL+ L+N+  P          +L  ++  V +R G  H NAD +SR P    C     DP
Sbjct:  408 SSTEQNYCTTRRELLAVVEFTRHFRQYLLGRPFIVRSDHSSLRWLVNMKEPEGQ-LARWLEKLAEYDFQVVHRPGHHHQNADVMSRRPCRTTCPCNMTDP 506
[Close]
BLAST of SMED30024578 vs. Ensembl Cavefish
Match: ENSAMXT00000054058.1 (pep primary_assembly:Astyanax_mexicanus-2.0:19:20158532:20160786:-1 gene:ENSAMXG00000037637.1 transcript:ENSAMXT00000054058.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 194.126 bits (492), Expect = 9.576e-52
Identity = 105/292 (35.96%), Postives = 164/292 (56.16%), Query Frame = -2 
Query: 2964 RIKTLIEKLD---SNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCFWDY 3755
            ++  ++ KLD   +  ++ EL +LL +  D+F+ G  +LG  E +KH+I    D P+ +          ++V + I  LL  GVI  S S++  P+V+VR  +G+IR+CVDYRKLN  T R  +P+P   + FD + GAK+F  IDLAS YHQV + E  + KT FTT +G +E  R+P G+ + P TFQ+LM   +  +     ++YL+                E +L RL++ GLK+  +KC FL++  K+LGH +   GI TD +K++A+K       +K  R F  +
Sbjct:  224 KVSDILSKLDIGGTEKEQAELRALLGKYSDVFAVGDDELGYTEKVKHEIVLVDDTPVNLPYRRIPPNQYKEVKDHISQLLRKGVIQESTSSYASPVVVVRKSDGSIRLCVDYRKLNLKTKRDAFPLPRIDESFDALRGAKFFSSIDLASGYHQVAVHERDRHKTAFTTPYGLYEHLRIPMGVVNGPATFQRLMQATMTDLIFQIILVYLDDILVFSRTFSEHVERLETVLRRLQETGLKIKIEKCHFLQEKVKFLGHQVSAEGIATDPDKVEAVKQWPVPTTLKALRSFLGF 515
[Close]
BLAST of SMED30024578 vs. Ensembl Cavefish
Match: ENSAMXT00000030011.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000985.1:52695:55099:1 gene:ENSAMXG00000041465.1 transcript:ENSAMXT00000030011.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 155.992 bits (393), Expect = 4.523e-51
Identity = 83/268 (30.97%), Postives = 140/268 (52.24%), Query Frame = -2 
Query: 2985 KDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKN 3713
            K EL+ L+ +  D+FS    D G+     H I+   D+P  +            +   ++ + E  +I  S+S +  P+V+V  KNG +R+C D+R LNA T +  +P+P+   +   + G  +F  +DL + Y+ V L E  K+ T F++  G  E+NR+  GLC++P TF ++M  +    N    + YL+                E +  RL++  LK+ P KCQFLR+  K+LGHI+   G+ TD  K++AI N  + ++++N
Sbjct:  144 KRELVDLIAKYDDVFSRHSLDCGEVRGFCHRIRLTDDRPFRLPYRRLSPAHYHKLRQTLDEMEERDIIRKSSSEFASPLVLVWKKNGDLRICTDFRWLNARTVKDAHPLPHQADVLAALGGNAFFSTMDLTAGYYNVPLHEEDKKYTAFSSPLGLHEYNRLAQGLCNSPATFMRMMLTIFGDQNFLSLLCYLDDLLVFARSEEESLQRLEMVFQRLREHNLKLSPSKCQFLRRKVKFLGHIVSKEGVATDPAKVEAIVNITEQQLMEN 411

HSP 2 Score: 48.9062 bits (115), Expect = 4.523e-51
Identity = 32/87 (36.78%), Postives = 49/87 (56.32%), Query Frame = -3 
Query: 2483 RYCITRKELLSIYLSV-KKFKHYLYGRRFTVRTDHQSLK*LLN---LDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLP 2731
            +Y   R E L++  ++  KF H+L G RFTV TD+  LK +L    LD+          A+L  F+ +++Y  G +++ ADALSR P
Sbjct:  546 KYPAHRLEFLAMKWAIHDKFSHWLRGHRFTVWTDNNPLKYILTKPRLDACEQR----WVAKLAPFDFDIQYISGAKNVVADALSREP 628

HSP 3 Score: 39.2762 bits (90), Expect = 4.523e-51
Identity = 29/112 (25.89%), Postives = 53/112 (47.32%), Query Frame = -1 
Query: 2752 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNE---------------RTIT----------AFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNG 3003
            PS +K ++ FLG+  YY+ +I+  + + + L+ +   +               R +T          A +NLK  L++  +L  P+ +  F+L  +AS    GA+L Q+Q G
Sbjct:  416 PSAEK-IRSFLGMAIYYQHYIEHCSTLAKPLFQLTTGQKKPRRGKGAKKCTQTRKLTPADWTIECKQALQNLKEALINQAMLAHPDFSKPFLLSVDASTRGLGAVLSQLQEG 526
[Close]
BLAST of SMED30024578 vs. Ensembl Cavefish
Match: ENSAMXT00000057525.1 (pep primary_assembly:Astyanax_mexicanus-2.0:APWO02000101.1:4796788:4801347:-1 gene:ENSAMXG00000035138.1 transcript:ENSAMXT00000057525.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 161.77 bits (408), Expect = 6.008e-51
Identity = 86/257 (33.46%), Postives = 135/257 (52.53%), Query Frame = -2 
Query: 3018 KDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3713
            K++L+ L+ + + +FS    D GK +   H I+   D+P  +            +  ++  + E  +I  S+S W  PIV+V  KNG +R+CVDYR LN+ T +  +P+P+       + G   F  +DL S ++ +E+ E  K+ T FTT  G +E NR+P GLC++P +F +LM  +    N    + YL+                E +  RL   GLK+ P KC  LR+  ++LGHIID NG+ TD +K+ AI
Sbjct:  342 KEQLVQLIQKYEGVFSKDKLDCGKAKDFYHRIRLSDDRPFRLPYRRVPPAHYHKLRQVLSEMEEREIIRKSSSEWASPIVLVWKKNGDLRICVDYRWLNSRTVKDAHPLPHQADCLAALGGNAIFSAMDLTSGFYNIEMAEEDKKFTAFTTPMGLYEMNRLPQGLCNSPASFMRLMMGIFGDQNFLSLLCYLDDVLVYAPNEGEALKRLEMVFARLSAHGLKLAPKKCHLLRRRVRFLGHIIDENGVATDPDKVKAI 598

HSP 2 Score: 43.5134 bits (101), Expect = 6.008e-51
Identity = 32/91 (35.16%), Postives = 46/91 (50.55%), Query Frame = -3 
Query: 2468 YCITRKELLSIYLSV-KKFKHYLYGRRFTVRTDHQSLK*LLN---LDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLPHYEQC 2728
            Y   R E L++  SV  KF H+L G  FTV TD+  L  +L    LD+          A+L  +  +++Y  G +++ ADALSR P    C
Sbjct:  743 YPAHRLEFLALKWSVCDKFSHWLKGNSFTVWTDNNPLTYILTKPKLDACEQRW----VAKLAPYNFSIQYIPGSKNVVADALSRQPFTRSC 829

HSP 3 Score: 38.1206 bits (87), Expect = 6.008e-51
Identity = 28/107 (26.17%), Postives = 50/107 (46.73%), Query Frame = -1 
Query: 2752 KELQMFLGLCEYYRRFIKDYADIFQLLYNML------------------------KNERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNG 2991
            ++++ FLG+  YY+RFI + + I + L+++                         K E +  +F  LK  L+   +L  P+ +  FIL ++AS    GA+L Q+  G
Sbjct:  617 RKIKAFLGMIMYYQRFIPNCSSIAKPLFSLTAAPKGRKVNRKGAAAFRKLRPDDWKQEHS-ESFAQLKSALLESVVLAHPDFSRPFILSTDASLDGLGAVLSQVPEG 722
[Close]
BLAST of SMED30024578 vs. Ensembl Cavefish
Match: ENSAMXT00000047338.1 (pep primary_assembly:Astyanax_mexicanus-2.0:9:32004976:32009589:-1 gene:ENSAMXG00000038997.1 transcript:ENSAMXT00000047338.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 198.749 bits (504), Expect = 7.075e-51
Identity = 104/276 (37.68%), Postives = 166/276 (60.14%), Query Frame = -2 
Query: 2961 KDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK------EDVNNM---IEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCFWDYV 3713
            K+ +I  L    ++F+    D G    +KH IK   + P + +      +D+N +   +E LLEAGVI  S S+++ PIV+VR KNG +R+CVDYRKLN  T +  Y +PN ++ F  + G+++F  +DL S Y+Q+ELEE+ K KT F    G +EFNR+P G+ +AP TFQ+LM   +  ++L + +++L++                ++L RLK+ GLK+ P+KC+F + + +YLGHI+  NG+ TD EKI ++KN  + + +K  R F  + 
Sbjct:  299 KERVIHKLNTMPEVFAQHDLDFGHSSKVKHHIKLSDETPFKQRARPIHPQDINAVRLHLEELLEAGVIRESESSFSSPIVVVRKKNGDVRLCVDYRKLNLQTVKDAYALPNLEETFSVLTGSQWFSVLDLKSGYYQIELEEADKHKTAFVCPMGFWEFNRLPQGITNAPSTFQRLMEKCMSDLHLKEVIVFLDDLIIFSATLEEHEHRLLRVLQRLKEYGLKLSPEKCKFFQTSVRYLGHIVSRNGVETDPEKIQSLKNWPNPKNLKELRSFLGFA 574

HSP 2 Score: 53.9138 bits (128), Expect = 1.410e-6
Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = -3 
Query: 2480 SKS*HRYCITRKELLSIYLSV-KKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLPH 2746
            S+S  RY   + E L++  +V +KF  YLYG  FTV TD   L  +L     + + Y   +A L  F   ++YR G+ +++ADALSR PH
Sbjct:  689 SRSESRYPAHKLEFLALKWAVTEKFSDYLYGNSFTVITDSNPLTYILTSAKLDATSYRWLSA-LSTFSFKLQYRPGKHNLDADALSRRPH 777
[Close]
BLAST of SMED30024578 vs. Ensembl Nematostella
Match: EDO34972 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SMV9])

HSP 1 Score: 45.0542 bits (105), Expect = 3.109e-6
Identity = 20/47 (42.55%), Postives = 30/47 (63.83%), Query Frame = -2 
Query: 3219 DLASEYHQVELEESFKEK-TVFTTKHGQFEFNRMPFGLCSAPVTFQK 3356
            DLA  +HQ+ +++   +K T+ T   G +EF RMPFG C+AP  F +
Sbjct:    8 DLAQGFHQIPVKKCNTDKITLRTGTGGLYEFTRMPFGFCNAPALFMR 54
[Close]
BLAST of SMED30024578 vs. Ensembl Medaka
Match: ENSORLT00000033471.1 (pep primary_assembly:ASM223467v1:20:15234491:15238537:-1 gene:ENSORLG00000027117.1 transcript:ENSORLT00000033471.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 169.088 bits (427), Expect = 1.221e-58
Identity = 91/260 (35.00%), Postives = 142/260 (54.62%), Query Frame = -2 
Query: 3018 NLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3722
            N  K+ L   L    ++FST   D+G    ++H I+ K + P   +         ED+   ++GLL AG+I  S S +  PIV+ R K+G +RMCVDYR LN  T    Y +P      D + G+K+F  +DL + Y+Q+ + E+ KEKT F    G ++F RMP G+  AP TFQ+LM   +  +++ + ++YL++                K++ RL++ GLK+  DKCQF R    Y+GH++   GI TD  K++A+
Sbjct:  179 NEWKERLRQKLSERSNVFSTDEWDVGLATGVEHCIRLKDETPFRERSRRIAPADLEDMRRHLQGLLAAGIIKESRSPYASPIVLARKKSGQLRMCVDYRTLNRRTIPDQYTVPRIDDALDCLSGSKWFSVLDLRNGYYQIPMAENDKEKTAFICPLGFYQFERMPQGITGAPSTFQRLMEKAVGDMHMLEVIVYLDDLIVFGKTLEEHEQRLLKVIDRLEETGLKLSLDKCQFCRPQVTYVGHVVSEKGISTDPAKVEAV 438

HSP 2 Score: 50.8322 bits (120), Expect = 1.221e-58
Identity = 34/123 (27.64%), Postives = 53/123 (43.09%), Query Frame = -1 
Query: 2764 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK------------------------------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNASF---GAILCQ 3033
            K     KW++P+    LQ FLG C YYRRFIK Y+ + + L  + K                              +E    AF+ + + L + P+L   + +  ++L  +ASF   GA+L Q
Sbjct:  434 KVEAVAKWKQPTDLPSLQSFLGFCGYYRRFIKGYSIVVRPLTELCKGYPPTQKKNKSGKTPVKFYHKVNEPFGERWDESCTEAFQQILQCLTNAPVLAFADPSKPYVLHVDASFHGLGAVLNQ 556

HSP 3 Score: 49.6766 bits (117), Expect = 1.221e-58
Identity = 31/86 (36.05%), Postives = 47/86 (54.65%), Query Frame = -3 
Query: 2474 YCITRKELLSI-YLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLPHYE 2728
            Y + + E L++ +  V KF  YLYG +F VRTD+  L  +L     N + +    A L  +   ++YR G  +I+AD+LSR P  E
Sbjct:  579 YPVHQLEFLALKWAVVDKFHDYLYGAQFVVRTDNNPLTYVLTTAKLNATGHRW-LAALSTYNFTLQYRPGSSNIDADSLSRNPVVE 663
[Close]
BLAST of SMED30024578 vs. Ensembl Medaka
Match: ENSORLT00000044147.1 (uncharacterized protein K02A2.6-like [Source:NCBI gene;Acc:111947635])

HSP 1 Score: 159.844 bits (403), Expect = 5.921e-56
Identity = 93/255 (36.47%), Postives = 136/255 (53.33%), Query Frame = -2 
Query: 3009 STGPTD----------LGKCEFLKHDIKTKVDQ----------PIEVKEDVNNMIEGLLEAGVISPSN-SAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCIN-----LTDCVIYLEEK---------ILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNG 3668
            ST P D          LG  +   H +K + D           P+ V++ V+  IE LLE  VI   + S W  PIV+   KNG +RMCVDYR+ N       +P+P+   IF  + GA  F  IDLA+ YHQV L E  ++ T F T  G F F R+P+GLCSAP  F KLM++VLK +      L D ++Y  ++         +L  L +AGL+++ +KC F +K+ ++LGH+I   G+L +++ + AI   
Sbjct:  403 STAPVDEIKTGAAAEKLGLAKGFIHKVKIREDVQPVQQKLRRLPVSVRQAVSCEIERLLEMEVIERIDASPWVSPIVVTLRKNGKVRMCVDYREPNKAIVMDSHPLPHMDDIFSNMYGATVFSTIDLANAYHQVLLAEESRDITAFITHEGLFRFRRVPYGLCSAPSAFSKLMSLVLKGLKGVQNYLDDVIVYGRDQQEHDRNLQAVLAALNEAGLQLNMEKCHFNQKSLQFLGHVISAKGLLPNEDHLKAIAEA 657

HSP 2 Score: 62.7734 bits (151), Expect = 5.921e-56
Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = -3 
Query: 2483 RYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV--*TAELEIFEMNVEYRKGEEHINADALSRLP 2731
            +Y I  KE L+   +V+K++ +L+G RFT+RTDHQ+L  LL       +   +   +A L  F  +VEYR G ++  AD LSRLP
Sbjct:  771 KYSIVEKEALACVWAVEKWRTFLWGTRFTLRTDHQALTTLLATKGLGRAGMRIARWSARLLCFTYDVEYRAGAQNYAADCLSRLP 855

HSP 3 Score: 38.1206 bits (87), Expect = 5.921e-56
Identity = 24/91 (26.37%), Postives = 45/91 (49.45%), Query Frame = -1 
Query: 2758 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKNE------RTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQ 3003
            P     L+ FLGL  +Y +F+K+YA + + +   L  +          +F+ +K  +++ P L +   +   I+ ++AS    GAIL Q+ 
Sbjct:  660 PGDATTLRSFLGLTAWYAKFVKNYASLVEPMRACLHTDTFKWTSEAQASFDAVKTRIINSPALAVFEPSLPTIVATDASDYGLGAILTQLH 750
[Close]
BLAST of SMED30024578 vs. Ensembl Medaka
Match: ENSORLT00000040051.1 (pep primary_assembly:ASM223467v1:1:37354481:37359289:-1 gene:ENSORLG00000026212.1 transcript:ENSORLT00000040051.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 150.214 bits (378), Expect = 4.629e-54
Identity = 81/236 (34.32%), Postives = 125/236 (52.97%), Query Frame = -2 
Query: 3018 LGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILL----------------RLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3650
            LG     +H I T  + P+  K         + +   I+ +L+ G+I PS SAW  P+V+V   +G++R CVDYR+LNA TT   YP+P    + + + GA++F  +DL S Y QV + E  K KT   T  G ++F  MPFGL +A  TFQ+LM  VL  +    C +Y+++ I+                 +L  A L ++  KC F ++  ++LGHI+ G G+  D +K  A+
Sbjct:  715 LGITSAEEHHIFTTDEVPVRCKAYRVSPFKRKIITEHIDQMLKDGIIEPSQSAWGAPVVLVPKPDGSMRFCVDYRRLNAKTTADAYPMPLIHDLLESMHGAEFFSTLDLKSGYWQVAMAEDSKAKTAVITPVGLYQFKSMPFGLKNAGATFQRLMEKVLGELRGRLCCVYIDDVIIFSPSAEQHLKDLQAVFGKLHSANLVLNLKKCTFFQRQLRFLGHIVSGAGVQVDPDKSRAV 950

HSP 2 Score: 57.7658 bits (138), Expect = 4.629e-54
Identity = 34/81 (41.98%), Postives = 47/81 (58.02%), Query Frame = -3 
Query: 2489 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV-*TAELEIFEMNVEYRKGEEHINADALSR 2728
            Y  + KE L++  +V+K++HYL G  FTV TDH +L    N   P TS      T  L+ F+  V+YRKG  ++  DALSR
Sbjct: 1068 YSTSEKECLAVVWAVEKWQHYLEGAEFTVFTDHAALTWAFN--CPKTSSRLTRWTLRLQRFQFKVQYRKGLHNVVPDALSR 1146

HSP 3 Score: 46.595 bits (109), Expect = 4.629e-54
Identity = 30/101 (29.70%), Postives = 50/101 (49.50%), Query Frame = -1 
Query: 2761 KNRCYKKWRRPSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQI 3033
            K+R    +  P+    LQ FLGL  +Y +FI  ++D+   L ++ K        E    +F  LK+ L   P+L  P+ +  F + ++AS    GA+L Q+
Sbjct:  946 KSRAVMTYPEPTNVPSLQRFLGLVGWYHKFIPQFSDLAAPLNHLRKKGVEWRWTEECQRSFNQLKQALAKAPILVQPDLSLPFEVHTDASDLGLGAVLAQM 1046
[Close]
BLAST of SMED30024578 vs. Ensembl Medaka
Match: ENSORLT00000031432.1 (pep primary_assembly:ASM223467v1:18:18329765:18334348:-1 gene:ENSORLG00000027440.1 transcript:ENSORLT00000031432.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 158.303 bits (399), Expect = 2.566e-52
Identity = 86/261 (32.95%), Postives = 136/261 (52.11%), Query Frame = -2 
Query: 3018 SNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3725
            S+  K +L+ LL + +D+FS    D G  + + H I     +P  +            +  ++  + E  +I  S S W  P+V+V  KNG +R+CVDYR LNA T +  +P+P+       + G   F  +DL S ++ + + E  K+ T FTT  G +EFNR+P GLC++P +F +LM  +    N    + YL+                E +  RL+  GLK+ P KCQ LR++ K+LGH++D  G+ TD +K+ AI
Sbjct:  350 SHYWKGQLLQLLQKYEDVFSKTKLDCGSAKDIVHRIHLSDSRPFRLPYRRVPPGQYHKLRQVLTEMEELEIIRKSKSEWASPLVLVWKKNGDLRICVDYRWLNARTIKDAHPLPHQADCLAALGGNAIFCAMDLTSGFYNIAMAEEDKKLTAFTTPMGLYEFNRLPQGLCNSPASFMRLMMNIFGDQNFLTLLCYLDDVLVYAPNEGEALRRLEMVFGRLRAHGLKLAPKKCQLLRRSVKFLGHVVDSKGVSTDPDKVKAI 610

HSP 2 Score: 46.2098 bits (108), Expect = 2.566e-52
Identity = 32/106 (30.19%), Postives = 51/106 (48.11%), Query Frame = -1 
Query: 2752 KELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAF----------------ENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNG 2991
            K+++ FLG+  YY++FI+  + I + L+ +         N R + AF                E LK  L+   +L  P+ N  FIL ++AS    GA+L Q+Q G
Sbjct:  629 KKIKSFLGMVMYYQQFIQGCSSIARPLFALTAAPKGRKGNSRGVAAFRKLHANDWKQEHSDSFERLKSALLESVILAHPDFNRPFILSTDASTDGLGAVLSQVQEG 734

HSP 3 Score: 43.8986 bits (102), Expect = 2.566e-52
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = -3 
Query: 2483 RYCITRKELLSIYLSV-KKFKHYLYGRRFTVRTDHQSLK*LLN---LDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLP 2731
            +Y   R E L++  SV  KF H+L G  FTV TD+  L  +L    LD+          A+L  +  N++Y  G +++ ADALSR P
Sbjct:  754 KYPAHRLEFLALKWSVCDKFSHWLRGNPFTVWTDNNPLTYILTKPKLDACEQRW----VAKLSPYSFNIKYIPGSKNVVADALSRQP 836
[Close]
BLAST of SMED30024578 vs. Ensembl Medaka
Match: ENSORLT00000034211.1 (pep primary_assembly:ASM223467v1:14:28948951:28953534:1 gene:ENSORLG00000029163.1 transcript:ENSORLT00000034211.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 156.762 bits (395), Expect = 1.619e-51
Identity = 86/261 (32.95%), Postives = 135/261 (51.72%), Query Frame = -2 
Query: 3018 SNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEVK---------EDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLE----------------EKILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAI 3725
            S+  K +L+ LL + +D+FS    D G  + + H I     +P  +            +  ++  + E  +I  S S W  P+V V  KNG +R+CVDYR LNA T +  +P+P+       + G   F  +DL S ++ + + E  K+ T FTT  G +EFNR+P GLC++P +F +LM  +    N    + YL+                E +  RL+  GLK+ P KCQ LR++ K+LGH++D  G+ TD +K+ AI
Sbjct:  350 SHYWKGQLLQLLQKYEDVFSKTKLDCGSAKDIVHRIHLSDSRPFRLPYRRVPPGQYHKLRQVLTEMEELEIIRKSKSEWASPLVPVWKKNGDLRICVDYRWLNARTIKDAHPLPHQADCLAALGGNAIFCAMDLTSGFYNIAMAEEDKKLTAFTTPMGLYEFNRLPQGLCNSPASFMRLMMNIFGDQNFLTLLCYLDDVLVYAPNEGEALRRLEMVFGRLRAHGLKLAPKKCQLLRRSVKFLGHVVDSKGVSTDPDKVKAI 610

HSP 2 Score: 46.2098 bits (108), Expect = 1.619e-51
Identity = 32/106 (30.19%), Postives = 51/106 (48.11%), Query Frame = -1 
Query: 2752 KELQMFLGLCEYYRRFIKDYADIFQLLYNMLK-------NERTITAF----------------ENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQIQNG 2991
            K+++ FLG+  YY++FI+  + I + L+ +         N R + AF                E LK  L+   +L  P+ N  FIL ++AS    GA+L Q+Q G
Sbjct:  629 KKIKSFLGMVMYYQQFIQGCSSIARPLFALTAAPKGRKGNSRGVAAFRKLHANDWKQEHSDSFERLKSALLESVILAHPDFNRPFILSTDASTDGLGAVLSQVQEG 734

HSP 3 Score: 42.743 bits (99), Expect = 1.619e-51
Identity = 31/87 (35.63%), Postives = 46/87 (52.87%), Query Frame = -3 
Query: 2483 RYCITRKELLSIYLSV-KKFKHYLYGRRFTVRTDHQSLK*LLN---LDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRLP 2731
            +Y   R E L++  SV  KF H+L G  FTV TD+  L  +L    LD+          ++L  +  N++Y  G +++ ADALSR P
Sbjct:  754 KYPAHRLEFLALKWSVCDKFSHWLRGNPFTVWTDNNPLTYILTKPKLDACEQRW----VSKLSPYSFNIKYIPGSKNVVADALSRQP 836
[Close]
BLAST of SMED30024578 vs. Planmine SMEST
Match: SMESG000010523.1 (SMESG000010523.1)

HSP 1 Score: 184.496 bits (467), Expect = 1.578e-64
Identity = 93/260 (35.77%), Postives = 145/260 (55.77%), Query Frame = -2 
Query: 3012 KKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3716
            +K++L  LL   KD+F+    DLG  +  +H I    D PI +         K +    ++ +L+AGVI PS S W FP+V+V+ K+G  R C+DYR+LNAVT R  YP+P+  ++   + GA YF  +DL S Y Q++++E  +EKT FT     ++F +MPFGL +AP +FQ+ MN V   I    C++Y+++                 + +RL++  LK+ P KC + ++   +LGHI+   G   D   I+ IKN
Sbjct: 1784 EKEQLQRLLMEFKDIFAASDLDLGTSDVTQHTIPLTDDTPITLRPYRLAEAQKSEAEKEVQKMLDAGVIEPSCSPWQFPVVMVKKKDGTQRFCIDYRRLNAVTKRDTYPLPDINEMLQTLHGAAYFTSLDLKSGYWQIKVKEEDREKTAFTIGKDLYQFKKMPFGLTNAPASFQRCMNFVTHGIK--QCMVYIDDLLIYSSTFEQHLKDIRNVFVRLRQWKLKLKPSKCDWAKEKVTFLGHIVSAKGKEPDPRNIEKIKN 2041

HSP 2 Score: 62.003 bits (149), Expect = 1.578e-64
Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = -1 
Query: 2764 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKN-------ERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3003
            P    ++Q FLGLC YYR+FIK YA I + +  + K        E   TAFE L+  L+S P+L  P+    F+L ++AS    GA+L Q
Sbjct: 2045 PKTVTQVQEFLGLCGYYRKFIKSYATIAKPIQELTKKDTPFIWEEEQQTAFETLRDKLISAPILVHPDFKKPFLLATDASGYASGAVLGQ 2134

HSP 3 Score: 42.743 bits (99), Expect = 1.578e-64
Identity = 24/81 (29.63%), Postives = 43/81 (53.09%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2728
            Y +T +E L+I  ++K FK+ L+G    + TDHQ L   L      +S       +L+ +   ++++ G+ + NAD +SR 
Sbjct: 2158 YSVTEREALAIIQAIKHFKYLLWGHEIYITTDHQPLV-WLGQHKEASSRLMRWAMQLQEYSPYIKFKSGKANANADCMSRF 2237
[Close]
BLAST of SMED30024578 vs. Planmine SMEST
Match: SMESG000010523.1 (SMESG000010523.1)

HSP 1 Score: 184.496 bits (467), Expect = 1.605e-64
Identity = 93/260 (35.77%), Postives = 145/260 (55.77%), Query Frame = -2 
Query: 3012 KKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3716
            +K++L  LL   KD+F+    DLG  +  +H I    D PI +         K +    ++ +L+AGVI PS S W FP+V+V+ K+G  R C+DYR+LNAVT R  YP+P+  ++   + GA YF  +DL S Y Q++++E  +EKT FT     ++F +MPFGL +AP +FQ+ MN V   I    C++Y+++                 + +RL++  LK+ P KC + ++   +LGHI+   G   D   I+ IKN
Sbjct: 1789 EKEQLQRLLMEFKDIFAASDLDLGTSDVTQHTIPLTDDTPITLRPYRLAEAQKSEAEKEVQKMLDAGVIEPSCSPWQFPVVMVKKKDGTQRFCIDYRRLNAVTKRDTYPLPDINEMLQTLHGAAYFTSLDLKSGYWQIKVKEEDREKTAFTIGKDLYQFKKMPFGLTNAPASFQRCMNFVTHGIK--QCMVYIDDLLIYSSTFEQHLKDIRNVFVRLRQWKLKLKPSKCDWAKEKVTFLGHIVSAKGKEPDPRNIEKIKN 2046

HSP 2 Score: 62.003 bits (149), Expect = 1.605e-64
Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = -1 
Query: 2764 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKN-------ERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3003
            P    ++Q FLGLC YYR+FIK YA I + +  + K        E   TAFE L+  L+S P+L  P+    F+L ++AS    GA+L Q
Sbjct: 2050 PKTVTQVQEFLGLCGYYRKFIKSYATIAKPIQELTKKDTPFIWEEEQQTAFETLRDKLISAPILVHPDFKKPFLLATDASGYASGAVLGQ 2139

HSP 3 Score: 42.743 bits (99), Expect = 1.605e-64
Identity = 24/81 (29.63%), Postives = 43/81 (53.09%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2728
            Y +T +E L+I  ++K FK+ L+G    + TDHQ L   L      +S       +L+ +   ++++ G+ + NAD +SR 
Sbjct: 2163 YSVTEREALAIIQAIKHFKYLLWGHEIYITTDHQPLV-WLGQHKEASSRLMRWAMQLQEYSPYIKFKSGKANANADCMSRF 2242
[Close]
BLAST of SMED30024578 vs. Planmine SMEST
Match: SMESG000010523.1 (SMESG000010523.1)

HSP 1 Score: 184.496 bits (467), Expect = 1.632e-64
Identity = 93/260 (35.77%), Postives = 145/260 (55.77%), Query Frame = -2 
Query: 3012 KKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3716
            +K++L  LL   KD+F+    DLG  +  +H I    D PI +         K +    ++ +L+AGVI PS S W FP+V+V+ K+G  R C+DYR+LNAVT R  YP+P+  ++   + GA YF  +DL S Y Q++++E  +EKT FT     ++F +MPFGL +AP +FQ+ MN V   I    C++Y+++                 + +RL++  LK+ P KC + ++   +LGHI+   G   D   I+ IKN
Sbjct: 1739 EKEQLQRLLMEFKDIFAASDLDLGTSDVTQHTIPLTDDTPITLRPYRLAEAQKSEAEKEVQKMLDAGVIEPSCSPWQFPVVMVKKKDGTQRFCIDYRRLNAVTKRDTYPLPDINEMLQTLHGAAYFTSLDLKSGYWQIKVKEEDREKTAFTIGKDLYQFKKMPFGLTNAPASFQRCMNFVTHGIK--QCMVYIDDLLIYSSTFEQHLKDIRNVFVRLRQWKLKLKPSKCDWAKEKVTFLGHIVSAKGKEPDPRNIEKIKN 1996

HSP 2 Score: 62.003 bits (149), Expect = 1.632e-64
Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = -1 
Query: 2764 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKN-------ERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3003
            P    ++Q FLGLC YYR+FIK YA I + +  + K        E   TAFE L+  L+S P+L  P+    F+L ++AS    GA+L Q
Sbjct: 2000 PKTVTQVQEFLGLCGYYRKFIKSYATIAKPIQELTKKDTPFIWEEEQQTAFETLRDKLISAPILVHPDFKKPFLLATDASGYASGAVLGQ 2089

HSP 3 Score: 42.743 bits (99), Expect = 1.632e-64
Identity = 24/81 (29.63%), Postives = 43/81 (53.09%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2728
            Y +T +E L+I  ++K FK+ L+G    + TDHQ L   L      +S       +L+ +   ++++ G+ + NAD +SR 
Sbjct: 2113 YSVTEREALAIIQAIKHFKYLLWGHEIYITTDHQPLV-WLGQHKEASSRLMRWAMQLQEYSPYIKFKSGKANANADCMSRF 2192
[Close]
BLAST of SMED30024578 vs. Planmine SMEST
Match: SMESG000019863.1 (SMESG000019863.1)

HSP 1 Score: 183.726 bits (465), Expect = 1.641e-64
Identity = 95/270 (35.19%), Postives = 150/270 (55.56%), Query Frame = -2 
Query: 3012 TLIEKLDSNLKKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3746
            T+  +L +  +K++L  LL   KD+F+    DLG  +  +H I    D PI +         K      ++ +L+AGVI PS S W FP+V+V+ K+G  R C+DYR+LNAVT R  YP+P+  ++   ++GA YF  +DL S Y Q++++E  +EKT FT     ++F +MPFGL +AP +FQ+ MN V   I    C++Y+++                 + +RL++  LK+ P KC + ++   +LGHI+   G   D   I+ IKN
Sbjct: 2667 TIDSQLLNETEKEQLQKLLMEFKDIFAASDLDLGTSDVTQHTIPLTDDTPITLRPYRLAEAQKSVAEKEVQKMLDAGVIEPSCSPWQFPVVMVKKKDGTQRFCIDYRRLNAVTKRDTYPLPDINEMLQMLDGAAYFTSLDLKSGYWQIKVKEEDREKTAFTIGKDLYQFKKMPFGLTNAPASFQRCMNFVTHGIK--QCMVYIDDLLIYSSTFEQHLKDIRNVFVRLRQWKLKLKPSKCDWAKEKVTFLGHIVSAKGKEPDPRNIEKIKN 2934

HSP 2 Score: 60.077 bits (144), Expect = 1.641e-64
Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = -1 
Query: 2764 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKN-------ERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3003
            P    ++Q FLGLC YYR+FIK+YA I + +  + K        E    AFE L+  L+S P+L  P+    F+L ++AS    GA+L Q
Sbjct: 2938 PKTVTQVQEFLGLCGYYRKFIKNYATIAKPIQELTKKDTPFIWEEEQQIAFETLRDKLISAPILVHPDFKKPFLLATDASGYASGAVLGQ 3027

HSP 3 Score: 45.0542 bits (105), Expect = 1.641e-64
Identity = 26/91 (28.57%), Postives = 46/91 (50.55%), Query Frame = -3 
Query: 2486 KWSCSKS*HRYCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2758
            +W   K    Y +T +E L+I  ++K FK+ L+G    + TDHQ L   L      +S       +L+ +   ++++ G+ + NAD +SR 
Sbjct: 3027 QWDDEKRERNYSVTEREALAIIQAIKHFKYLLWGHEIYITTDHQPLV-WLGQHKEASSRLMRWAMQLQEYSPYIKFKSGKANANADCMSRF 3116
[Close]
BLAST of SMED30024578 vs. Planmine SMEST
Match: SMESG000010523.1 (SMESG000010523.1)

HSP 1 Score: 184.496 bits (467), Expect = 1.659e-64
Identity = 93/260 (35.77%), Postives = 145/260 (55.77%), Query Frame = -2 
Query: 3012 KKDELISLLFRNKDLFSTGPTDLGKCEFLKHDIKTKVDQPIEV---------KEDVNNMIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLYPIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFEFNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEE----------------KILLRLKKAGLKMDPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKN 3716
            +K++L  LL   KD+F+    DLG  +  +H I    D PI +         K +    ++ +L+AGVI PS S W FP+V+V+ K+G  R C+DYR+LNAVT R  YP+P+  ++   + GA YF  +DL S Y Q++++E  +EKT FT     ++F +MPFGL +AP +FQ+ MN V   I    C++Y+++                 + +RL++  LK+ P KC + ++   +LGHI+   G   D   I+ IKN
Sbjct: 1739 EKEQLQRLLMEFKDIFAASDLDLGTSDVTQHTIPLTDDTPITLRPYRLAEAQKSEAEKEVQKMLDAGVIEPSCSPWQFPVVMVKKKDGTQRFCIDYRRLNAVTKRDTYPLPDINEMLQTLHGAAYFTSLDLKSGYWQIKVKEEDREKTAFTIGKDLYQFKKMPFGLTNAPASFQRCMNFVTHGIK--QCMVYIDDLLIYSSTFEQHLKDIRNVFVRLRQWKLKLKPSKCDWAKEKVTFLGHIVSAKGKEPDPRNIEKIKN 1996

HSP 2 Score: 62.003 bits (149), Expect = 1.659e-64
Identity = 36/90 (40.00%), Postives = 50/90 (55.56%), Query Frame = -1 
Query: 2764 PSCDKELQMFLGLCEYYRRFIKDYADIFQLLYNMLKN-------ERTITAFENLKRPLVSHPLLTIPNKNDAFILDSNAS---FGAILCQ 3003
            P    ++Q FLGLC YYR+FIK YA I + +  + K        E   TAFE L+  L+S P+L  P+    F+L ++AS    GA+L Q
Sbjct: 2000 PKTVTQVQEFLGLCGYYRKFIKSYATIAKPIQELTKKDTPFIWEEEQQTAFETLRDKLISAPILVHPDFKKPFLLATDASGYASGAVLGQ 2089

HSP 3 Score: 42.743 bits (99), Expect = 1.659e-64
Identity = 24/81 (29.63%), Postives = 43/81 (53.09%), Query Frame = -3 
Query: 2486 YCITRKELLSIYLSVKKFKHYLYGRRFTVRTDHQSLK*LLNLDSPNTS*YCV*TAELEIFEMNVEYRKGEEHINADALSRL 2728
            Y +T +E L+I  ++K FK+ L+G    + TDHQ L   L      +S       +L+ +   ++++ G+ + NAD +SR 
Sbjct: 2113 YSVTEREALAIIQAIKHFKYLLWGHEIYITTDHQPLV-WLGQHKEASSRLMRWAMQLQEYSPYIKFKSGKANANADCMSRF 2192
The following BLAST results are available for this feature:
BLAST of SMED30024578 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024578 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024578 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024578 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
BX511082.11.131e-3233.92pep chromosome:GRCz11:9:14291932:14297132:1 gene:E... [more]
BX511224.16.903e-3233.92pep chromosome:GRCz11:2:18017000:18022765:1 gene:E... [more]
BX546500.18.282e-3233.48pep chromosome:GRCz11:23:12926092:12931693:-1 gene... [more]
CR925755.29.397e-3233.48pep chromosome:GRCz11:17:42486740:42492668:-1 gene... [more]
CR855320.16.447e-3133.04pep chromosome:GRCz11:1:7956030:7961696:1 gene:ENS... [more]
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BLAST of SMED30024578 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5
Match NameE-valueIdentityDescription
anxa65.349e-6233.07annexin A6 [Source:Xenbase;Acc:XB-GENE-989741][more]
ENSXETT00000006041.11.285e-4637.87pep primary_assembly:Xenopus_tropicalis_v9.1:6:373... [more]
alkbh51.330e-4035.87alkB homolog 5, RNA demethylase [Source:Xenbase;Ac... [more]
ENSXETT00000015952.12.326e-3134.85pep primary_assembly:Xenopus_tropicalis_v9.1:8:632... [more]
ENSXETT00000024810.11.184e-3030.10pep primary_assembly:Xenopus_tropicalis_v9.1:KV464... [more]
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BLAST of SMED30024578 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024578 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|P04323|POL3_DROME5.118e-6336.09Retrovirus-related Pol polyprotein from transposon... [more]
sp|P20825|POL2_DROME4.778e-6237.45Retrovirus-related Pol polyprotein from transposon... [more]
sp|P10394|POL4_DROME9.747e-5128.42Retrovirus-related Pol polyprotein from transposon... [more]
sp|Q8I7P9|POL5_DROME1.330e-3235.65Retrovirus-related Pol polyprotein from transposon... [more]
sp|Q7LHG5|YI31B_YEAST3.234e-2832.56Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomy... [more]
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BLAST of SMED30024578 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0V1NDZ83.809e-8537.83Transposon Ty3-I Gag-Pol polyprotein OS=Trichinell... [more]
A0A0V1CIR64.036e-8537.83Transposon Ty3-G Gag-Pol polyprotein OS=Trichinell... [more]
A0A0V0TPL44.070e-8537.83Transposon Ty3-I Gag-Pol polyprotein OS=Trichinell... [more]
A0A0V0RE014.104e-8537.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A0V1DU221.233e-8437.08Retrovirus-related Pol polyprotein from transposon... [more]
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BLAST of SMED30024578 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000048272.12.404e-5437.98pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000054058.19.576e-5235.96pep primary_assembly:Astyanax_mexicanus-2.0:19:201... [more]
ENSAMXT00000030011.14.523e-5130.97pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000057525.16.008e-5133.46pep primary_assembly:Astyanax_mexicanus-2.0:APWO02... [more]
ENSAMXT00000047338.17.075e-5137.68pep primary_assembly:Astyanax_mexicanus-2.0:9:3200... [more]
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BLAST of SMED30024578 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024578 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of SMED30024578 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1
Match NameE-valueIdentityDescription
EDO349723.109e-642.55Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of SMED30024578 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSORLT00000033471.11.221e-5835.00pep primary_assembly:ASM223467v1:20:15234491:15238... [more]
ENSORLT00000044147.15.921e-5636.47uncharacterized protein K02A2.6-like [Source:NCBI ... [more]
ENSORLT00000040051.14.629e-5434.32pep primary_assembly:ASM223467v1:1:37354481:373592... [more]
ENSORLT00000031432.12.566e-5232.95pep primary_assembly:ASM223467v1:18:18329765:18334... [more]
ENSORLT00000034211.11.619e-5132.95pep primary_assembly:ASM223467v1:14:28948951:28953... [more]
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BLAST of SMED30024578 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5
Match NameE-valueIdentityDescription
SMESG000010523.11.578e-6435.77SMESG000010523.1[more]
SMESG000010523.11.605e-6435.77SMESG000010523.1[more]
SMESG000010523.11.632e-6435.77SMESG000010523.1[more]
SMESG000019863.11.641e-6435.19SMESG000019863.1[more]
SMESG000010523.11.659e-6435.77SMESG000010523.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024578 ID=SMED30024578|Name=SMED30024578|organism=Schmidtea mediterranea sexual|type=transcript|length=4095bp
CGAAATTATTTTTTATTTATACCAATATTTGATTGTTCTAGAATTTTATC
CTAAAATATTTATTTAATGAAATTTACACTTGAACATACAATTATAGCAT
TAGTTGTGCAGCTTTACCGTATTACTTCATGTCATTGCGCACATGAACAT
TCCTAAATCGAAGTCATTGTGTTCTGGTTAGATTTATTATTACATATTAT
TATACCTTACAATTATAAACAATTTTTTACTTAAAATCTTTAAAGCCCTT
AAAAATGTTTTAAAAAATTAATTTTATTCTTTTGTTGAAATTATGCATGC
ATGTATTTTATGTTACTACTCAAAAGTTTCCACTTCTTTCACTAGACTTT
TCTATAACATCATAGACTCTTCATCAAGGCATTATGTAACTTATTAAATC
TATTTTTGTGATTGTGAAATTTTTATTAACTGAGAAAATTTGGCTCCGAA
TAAAATTGCATTATTAATTTCGACGTTTACACTACACTATACTTTTGTCG
GAATATGAAACTTATAATAATTATTGTTTTCAGCAGGTCTGTATATTTAC
TTGTCTATATGTCAATAATTGTAATTTCCATTTAGAAGTAAGAATCGTTA
ATTGCTAGAGTTTAAAAATGTTGTGTTTTTGTTTGATTTTTTGAGATTTT
ACGTCATTTTTAATTTAATTCTAATTAAATTTTTTCAAAAAATTTGATTT
GATGAGCCTTTAGACATTCTTATCGAAATCTATATAAACTTATATTTCTG
AAAGAAAACCTGAAAGAAACACTGACGCACATGAATATCAAATCTCAAGG
ACCAATCAGAAGATTATTCGTTTAGTGATTGACTATTCGATATAATGATT
GCATTGCGTGCCTGTTGTCATTTGTTTATGTGCTTGTATTTGTGTGCTAT
CTTTAAATTTCTCTTCAAGTTACACCAAAGGGCATTTGATAAGCATTTAT
AATACAAAAATAAGGGGAAGTCAATCGCACTAATGCAGAAGTAAGGTATT
TTTATAATTGTGTGTAATAAGAACACTAAAGTATTAATATATCTTTATTA
ATTAAATATGCGCCTTTTAATTATTATTAAAACAACTATATAATATCACA
CATCTCCTTGTTAGTCAAGAATTCTTTTCGGTTTAGTGTTTCGATTAGCA
CGAACAGGCCTTTTTGACGTATTTGATAAATTATGTGATATTTTAGCATT
TCCCAATTCCTTTGTGTCTTTGCTCACGATACTTGTTTCTGAACTACTTG
ATTGATAGCTTGAATGAATATTTGAAACATTTCTTTCTCCGACAAACTTT
TTTAATCTGATTGTAACTTCTCTTTATTCTTTCGTTCAGCTTTTCACTAT
GCAACAAGTATGTTCATTTATCTAATACCGTTATCTAAAACCGCCCATGT
ACCTTTTACTAATAAAAGGTCTATAGAACGGATTTTCGAACAATACAGTT
TCTCCAACTATGAATTCATTAAGGTGCTTACCTCTGTTGTAATATTTGCT
TGTCTCTTTTGTGATATCCCGCAATGTTCTTTTACTGTATCAAATATTTT
CATATGGTTTTGTCTGAACGTTTCAATGACTTCTGAATGCACTTTAACTA
TTACTTTTCCGATAAATAATTTCGGCTTTCTTCCAAATAAAACTTCAAAC
GGGAATATTTGGTTGATTTTTGAGGAGACATTCTTAGCCCATATTCAATA
TTCGTCACCACTTCATCCCAGTCTTCCCTTTTTCATCGTTGATTGTATTA
ATTCTTTCCTTGATTTGAATGCTCTTTCTATTAATCCATTTTATTGAGAA
TAATAATGTGACGATTCGGTTTTCTTTAAATAACTCTGATTGAAAATTTG
TTCCATTATCGGATTCAATTCTTCCTGGTACTCCAAATCGACTAATTCAT
GTTACCTATAGTTCACATGAATTTTTATCTGCAGTGTCAATGCCTATAAT
TTCAAATGGCTCCATCGCAACAATTGATTGTAATTCTGCCCGTTGTCTCG
CATTTGTTCTTTTATTAAATTGGCATGACTCACATTTTTGAATCAGTTCC
GTTACTTCTTTTGTCAAATTTGGCCAATAAAAATTCATTTTTATTGTTAT
TTCCGTTTTTTCAACCCTAATATGGCCTAACTTTCATGAATCATTTGGAC
TAAACATTCTGTATTACTTTCTTGTACAACATATCTATAGACATTAAACT
TAAAATAATGTAATGTATTGTTTCGAATTTTTAACTGTTTTCTTTTCCTC
CATAATTTTTTAACATTTTCTTCGCCGCTTCTTTCTTCTGTCACTCCACT
TTGAAGTAATTGGATCACCAGTTTAATATTTGCATCTTTTTGTTGATTTA
TCTTATCATCGATTATAATTTGACATAAAACTTCTTCGTGTTCTACAGAG
ATCTCAGATTTACTGTCTGTGTGTATTTTATATTTCTTTTTTTCTATGGA
TCTCCGTGTTTCAACGCACATTGTTCATAATGTGGCAATCTAGAAAGCGC
ATCAGCATTAATGTGTTCTTCACCTTTCCTGTATTCCACATTCATTTCAA
ATATTTCTAGTTCTGCTGTCTACACACAATATTAAGATGTGTTTGGGGAA
TCCAAATTTAGCAATCATTTTAAAGACTGATGATCTGTTCTTACTGTAAA
ACGTCGTCCATACAAGTAATGCTTAAATTTCTTTACAGAAAGATAAATAG
ATAACAACTCTTTCCTAGTTATGCAGTATCTGTGTTAGGACTTACTGCAT
GACCATTTTGAATTTGACATAATATAGCTCCAAAGGACGCATTTGAATCT
AAAATAAATGCATCATTTTTATTTGGAATCGTTAAGAGTGGATGTGACAC
CAGGGGACGTTTTAAGTTTTCAAATGCCGTAATTGTTCTTTCATTCTTTA
ACATGTTGTATAATAGTTGAAAAATATCTGCATAATCCTTTATAAAACGC
CTGTAATATTCACATAGTCCCAAAAACATCTGTAATTCTTTATCACACGA
TGGTCGTCTCCATTTTTTATAGCATCTATTTTTTCGTCATCAGTTAGAAT
TCCATTACCGTCTATAATATGTCCTAAATATTTAAAATTCTTTCTTAAAA
ATTGACACTTATCAGGATCCATTTTTAATCCAGCTTTCTTTAACCTTAAT
AGTATTTTTTCTTCAAGATAGATAACGCAGTCTGTCAAATTTATACATTT
CAGCACAATATTCATTAATTTCTGAAATGTAACAGGTGCTGAACATAGTC
CAAACGGCATGCGGTTAAACTCAAATTGACCATGCTTTGTGGTGAATACT
GTCTTTTCTTTGAACGACTCTTCTAATTCTACTTGATGATACTCACTTGC
CAAGTCAATTTTTGGAAAATATTTTGCTCCTTCAATTGGATCAAAGATTT
TTTTGGAATTAGGAATTGGATAAAGTGTACGAGTCGTTACTGCATTTAAC
TTCCTATAATCAACACACATTCTGATTGCACCGTTTTTCGTCCGTACAAT
AACTATAGGAAAATTCCAGGCTGAGTTGCTTGGACTTATTACCCCAGCTT
CCAAAAGTCCTTCAATCATATTGTTTACATCTTCTTTCACTTCTATCGGT
TGATCTACTTTTGTTTTAATATCATGTTTCAGAAATTCACATTTTCCCAA
ATCCGTTGGTCCTGTACTAAATAGATCTTTATTACGAAATAGAAGAGATA
TTAATTCATCTTTCTTTAAATTTGAATCCAATTTCTCTATTAAAGTTTTG
ATTCTTCCAAGTTTATGGATCCTAAATATTTAGTATTTACGAAATCAGAA
TTACGAATTTCCTTAATTGATTGTACAAATCCTAATGATGTTCTAGTAAA
TAGTTTTTTGTTACCATTCTCAAATTGTTTCAACCTCACTAAAACATATC
CATCTGATGATTTAACTAAAGAATCTGCAAGAGCAATATCTCTTTTTAAA
TTTATCGGTTTATCTCCTGTAAACAAATAATCGCTCGAGACATTAATTTT
TTTATTAGACTCATCAATGATCATCCCTCTTACAAAATAAATTCAAATCT
TAATAGCCACATCACTGACCAATATTACTCTTAGTATCTTCAATC
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protein sequence of SMED30024578-orf-1

>SMED30024578-orf-1 ID=SMED30024578-orf-1|Name=SMED30024578-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=210bp
MIEGLLEAGVISPSNSAWNFPIVIVRTKNGAIRMCVDYRKLNAVTTRTLY
PIPNSKKIFDPIEGAKYFPKIDLASEYHQVELEESFKEKTVFTTKHGQFE
FNRMPFGLCSAPVTFQKLMNIVLKCINLTDCVIYLEEKILLRLKKAGLKM
DPDKCQFLRKNFKYLGHIIDGNGILTDDEKIDAIKNGDDHRVIKNYRCFW
DYVNITGVL*
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protein sequence of SMED30024578-orf-2

>SMED30024578-orf-2 ID=SMED30024578-orf-2|Name=SMED30024578-orf-2|organism=Schmidtea mediterranea sexual|type=polypeptide|length=115bp
MCVETRRSIEKKKYKIHTDSKSEISVEHEEVLCQIIIDDKINQQKDANIK
LVIQLLQSGVTEERSGEENVKKLWRKRKQLKIRNNTLHYFKFNVYRYVVQ
ESNTECLVQMIHES*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0002056medial muscle cell
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf
IPR000477RT_dom
Vocabulary: molecular function
TermDefinition
GO:0003676nucleic acid binding