Cell wall integrity and stress response component 1
Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppSub-lethal Irradiated Surviving X1 and X2 Cell Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024477 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 1
Homology
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A5P8I4L8 (Uncharacterized protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.510e-60 Identity = 113/230 (49.13%), Postives = 153/230 (66.52%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNYFNKKIKKYFAR--------IGCFSI 668 RTGT SLK ALEKLYN CY++ E+ ++H+ H ++W SV ++ ++ + A I S+Y A D P + VYKDLMEIYP+AKV+LT RNSDDW+KSV+ TT+ + + K LF+ F ++ K + YK+PF+ L T+D +LK+ YEE+N EVR +VP ERLLEFN EGWEPLC+FLNLP PNEP+PFVN+T++F + K R IGC S+ Sbjct: 17 RTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEEFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLPVPNEPYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSL 246
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A183SJN6 (Uncharacterized protein OS=Schistocephalus solidus OX=70667 GN=SSLN_LOCUS4434 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.384e-36 Identity = 85/212 (40.09%), Postives = 123/212 (58.02%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEE---LRKDVA--ESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKM--MRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNY 617 RTGT SL+ ALEKLY CY+ + + + W L+ E LR D A +L YC TD P S+ +K+LM+ YP+AKVILT R+ D W+KS+R T + +K + F+ W+ G +++V + + ++ + LM NDV L++A+ E+ V+ VP ERLL FN EGW PLC FL+ P P+ PFP VN+++E Y Sbjct: 25 RTGTRSLQTALEKLYGEACYHTFDSMQHTPQDLQFWVESLDDMEGGVLRTDAAYWNRLLQGYCGTTDFPGSVFFKELMQAYPNAKVILTTRDPDAWVKSMRATVFPLDFYKSHGVFLNFVLWLKGITGILQIVDQGLRLSLRRSQDDLM-NDVQLRQAFLEWTAHVKKTVPSERLLIFNAQEGWGPLCHFLHRPIPDCPFPHVNASKEMKRY 235
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A267F2Y8 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig019790g1 PE=4 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.243e-33 Identity = 67/182 (36.81%), Postives = 105/182 (57.69%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCK 548 RTGTNS ALE L G+CY++ V + H ++W+ + L K++AE I ++ A TD P + YK+LM+IYPDAK +L+IR+ DW++SVR T + S++ + W+ G ++ L + F++ +D + A+ +N+ V +P ERLL F V++GWEPLCK Sbjct: 15 RTGTNSQMKALEMLLGGRCYHMDIVMEEKLSHLQLWHRA-AIQGLSKELAEEIFDDFLACTDFPAAHFYKELMQIYPDAKFVLSIRDPTDWVRSVRATILQSKLTVEYMLPPVRWLLGLSHYLPLSDAVLGSRLGFNFDM---SDAEMIDAFNRHNDTVIRTIPKERLLVFRVSDGWEPLCK 192
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A267EHD0 (Uncharacterized protein (Fragment) OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig007040g1 PE=4 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 3.306e-33 Identity = 80/202 (39.60%), Postives = 118/202 (58.42%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEF 608 RTGTNS ALE L G+CY+++ + + +HH ++W TE L K++A+ +LSE+ A TD P + Y +LM+IYP+AK IL++R + W++SVR T ++ + W+ G +L R+ P +D L A++ + V +P ERLL F V +GWEPLCKFLN+P P+ PFP VN T+EF Sbjct: 7 RTGTNSQMKALEILLGGRCYHMEVIIEEKRHHLKLWLKA-ATEGLTKELADEMLSEFRACTDFPAAHFYSELMQIYPEAKFILSLREPERWVQSVRATVYKAQSAGKHILPPIAWLIGFNYMDKLQTAMFPRMGMNP----GVSDQELAVAFDRHTEAVIRTIPKERLLVFRVTDGWEPLCKFLNVPVPDVPFPCVNDTKEF 203
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Match: A0A5J4NJ02 (Uncharacterized protein OS=Paragonimus westermani OX=34504 GN=DEA37_0011863 PE=4 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 3.382e-33 Identity = 78/212 (36.79%), Postives = 121/212 (57.08%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVW--------NSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFW--IFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEF 608 RTGTNSLK+ALE LYN CY++K+++ +H W NS +T +L K + + IL +Y + D P YK+L+++YP+AKVILT+RN + W+ R T + ++ W F F +FG E+ S R++ Q + +ND + + + V VP +RLL +++++GWEPLC+FL+ P P+ PFP VN +E Sbjct: 19 RTGTNSLKLALEILYNKPCYHLKDLYRNRRHGVARWLELEKRLKNS--KTGQLDKSLCDEILGKYGSAVDHPVCAYYKELLDVYPNAKVILTVRNPEIWLAGCRSTILPRDLFANRPWSFYFLRHVFGLKPLHEVYLDSWRRVFGQTMDF--SNDTAMMNGFVAWTERVTQTVPADRLLIYDISKGWEPLCRFLDKPVPDRPFPHVNEYQEL 226
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO49231 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RGU4]) HSP 1 Score: 78.9518 bits (193), Expect = 7.599e-18 Identity = 55/183 (30.05%), Postives = 94/183 (51.37%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDV--VLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLC 545 +T T S+ AL L YN+ +V + F+ W ++E L E++ A+TD+P + ++++++ PDAKVILT+R + W++S + KM++ F F S + + L + I+ + + ++ KA E +N VR+ VPP +LLE++V EGW PLC Sbjct: 10 KTATKSMAKALRIL----GYNVYDVEEQICELFDDWLDLIEHGRLPD--FEAMFENVDAITDLPGNFFFEEILKASPDAKVILTVREQEAWLRSSKKQL------KMVQGLFSKLWFLSLSPIYLGIRKITNGMVAALYGTINAESTWIIAKALEMHNQRVRSTVPPGQLLEYSVTEGWGPLC 180
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO41210 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S4T7]) HSP 1 Score: 77.0258 bits (188), Expect = 5.195e-17 Identity = 59/185 (31.89%), Postives = 96/185 (51.89%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIR-NSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGS-WTFMELVAKSISRIYKQPFELLMTNDVVL-KKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCK 548 +TGT SL AL ++ K Y+ E YH E W ET ++ D+ + + AVTD+P Y++L +P+AKVIL++R N+D W +S+ + +R F + + W +++ +S + F+ N +L KKAY E+N V+ +P ++LL F V +GW PLC+ Sbjct: 32 KTGTKSLAKAL-RILGLKVYDADEHCIYH---MEEWIQAFETSKM-PDLYR-MYKDVDAVTDVPPMFWYEELHYAFPEAKVILSVRDNTDVWYESLLWNQKVLKEAMSLRVMLGFLLTPTGWK----MSRMMSDMMNAAFKSTNPNAAILNKKAYREHNERVKNVIPKDKLLVFKVEQGWPPLCR 206
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO33663 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SRI4]) HSP 1 Score: 74.7146 bits (182), Expect = 1.181e-16 Identity = 56/184 (30.43%), Postives = 94/184 (51.09%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRW-KFLFWIFGSWTFMELVAKSISRIYKQPF--ELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLC 545 +TGT S+ AL L Y + ++ + + W ++ +L +S+ + A+TD P S +++++ +P AKV+LT+R+ D W +S+ + +E KM W K F S TF +L K IS I + + + +K +NN VR VP ++LL F+V +GW+PLC Sbjct: 10 KTGTKSMAKALRML----GYTVYDIAEQLGEFADEWTDLIIEGKLPD--FKSMFHDIDAITDYPGSFFFEEILAAFPQAKVVLTVRDEDAWARSLSLE--IAETAKM--WSKNSVLAFLSPTFAKL--KRISLIMETAMCGNFTPKSTFIHRKFIHMHNNRVRINVPKDQLLVFSVTQGWQPLC 181
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO48574 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RIV4]) HSP 1 Score: 69.707 bits (169), Expect = 4.292e-14 Identity = 55/182 (30.22%), Postives = 91/182 (50.00%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDD-WIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLC 545 +TGT SL AL L YN+ + + Q H + + + E + E + + A TD+P SI YK++ + +PDAKVIL++R+ ++ W +S+ T V M L + + T + SRI + + N + + Y ++N +V +P ++LL FN +GWEPLC Sbjct: 165 KTGTKSLASALRHL----GYNVHDHPEQIQFHCDEYIAAFEGQMPN---FEEMYANVDATTDLPASIFYKEIFKAFPDAKVILSVRDDEESWRRSLLKTV---GVVSSMTNNPLLIVCRTLT---PTGRKYSRILR-----FIMNYLKNEIDYTKHNGDVMANIPAKQLLVFNPKDGWEPLC 328
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Match: EDO39565 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S9S8]) HSP 1 Score: 65.855 bits (159), Expect = 3.386e-13 Identity = 50/188 (26.60%), Postives = 92/188 (48.94%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLET-----EELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDD-WIKS-VRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLC 545 +TGT SL AL +L +N+ + + Q H + + + + EE+ ++V A TD+P I YK++ + +PDAKVIL++R+ ++ W KS ++ ++ S + ++ S + + ++ + K + Y ++NNEV +P ++LL FN +GWE LC Sbjct: 10 KTGTKSLASALRRL----GFNVHDHHEQLQFHCDEYIAAFKGPMPNFEEMYENVD--------ATTDLPACIFYKEIFKAFPDAKVILSVRDDEESWRKSFLKTESIVSSATSNLLMILGLFLTPSGRKLWRLGYNVKKYVKNELD------------YTKHNNEVMATIPAKQLLVFNPKDGWESLC 173
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035035.1 (SMESG000035035.1) HSP 1 Score: 433.335 bits (1113), Expect = 2.744e-156 Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNYFNKKIKKYFARIGCFSIFFG 677 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKFLNLPFPNEPFPFVNSTEEFLNYFNKKIKKYFARIGCFSIFFG Sbjct: 10 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKFLNLPFPNEPFPFVNSTEEFLNYFNKKIKKYFARIGCFSIFFG 234
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035040.1 (SMESG000035040.1) HSP 1 Score: 222.631 bits (566), Expect = 4.725e-73 Identity = 124/226 (54.87%), Postives = 154/226 (68.14%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNYFNKKIKKYFARIGCF-SIFFG 677 RTGT SLK+ALEKLYNGKCY++ E+F+ H++H +W SV + L K AES+LS+YCA D P + VYKDLM++YP+AKVILT RNSDDW+KSVR TT+ K F G F E K I+ YK +E L+ +D +LK+ YE++N EVR VP ERLLEFN +GWEPLC FLNLP P+EP+PFVNSTEEF Y NK F + G F +IF G Sbjct: 17 RTGTKSLKMALEKLYNGKCYHMAEIFENHRNHISLWISVFDKNGLDKSTAESLLSDYCATVDFPSTAVYKDLMKLYPNAKVILTTRNSDDWLKSVRNTTLKKGSDVTFLSKIFFMFSGLGRFPEFSEKLINHAYKNSYETLINDDAILKQCYEDFNQEVRETVPKERLLEFNSKQGWEPLCTFLNLPIPDEPYPFVNSTEEFNKYINKTYLADFVKYGIFVTIFAG 242
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035096.1 (SMESG000035096.1) HSP 1 Score: 199.904 bits (507), Expect = 5.052e-64 Identity = 112/230 (48.70%), Postives = 152/230 (66.09%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNYFNKKIKKYFAR--------IGCFSI 668 RTGT SLK ALEKLYN CY++ E+ ++H+ H ++W SV ++ ++ + A I S+Y A D P + VYKDLMEIYP+AKV+LT RNSDDW+KSVR TT+ E+ + KFL + F + K + YK+PF+ + +D +LK+ YE++N EVR +VP ERLLEFN EGWEPLC+FLNLP PNEP+PFVN+T++F + K R IGC S+ Sbjct: 17 RTGTFSLKFALEKLYNRPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVRSTTLKDEMRTSLFDKFLLFFSIGTEFPVMCDKMFLKAYKKPFDAVRADDELLKQCYEDFNEEVRIYVPKERLLEFNAKEGWEPLCRFLNLPVPNEPYPFVNTTQDFQRNVRGIMLKSLIRSGLAISLTIGCLSL 246
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035037.1 (SMESG000035037.1) HSP 1 Score: 199.134 bits (505), Expect = 7.552e-64 Identity = 111/230 (48.26%), Postives = 152/230 (66.09%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNYFNKKIKKYFAR--------IGCFSI 668 RTGT SLK ALEKLYN CY++ E+ ++H+ H ++W SV ++ ++ + A I S+Y A D P + VYKDLMEIYP+AKV+LT RNSDDW+KSV+ TT+ + + K LF+ F ++ K + YK+PF+ L T+D +LK+ YE++N EVR +VP ERLLEFN EGWEPLC+FLNL PNEP+PFVN+T++F + K R IGC S+ Sbjct: 17 RTGTFSLKFALEKLYNCPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMFLKAYKEPFDALRTDDELLKQCYEDFNEEVRKYVPKERLLEFNAKEGWEPLCRFLNLQVPNEPYPFVNTTKDFQRNVRGMMLKSVIRSGLVLSLTIGCLSL 246
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Match: SMESG000035036.1 (SMESG000035036.1) HSP 1 Score: 198.364 bits (503), Expect = 1.802e-63 Identity = 113/230 (49.13%), Postives = 153/230 (66.52%), Query Frame = 3 Query: 3 RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAESILSEYCAVTDIPCSIVYKDLMEIYPDAKVILTIRNSDDWIKSVRMTTMTSEVHKMMRWKFLFWIFGSWTFMELVAKSISRIYKQPFELLMTNDVVLKKAYEEYNNEVRTFVPPERLLEFNVNEGWEPLCKXXXXXXXXXXXXXVNSTEEFLNYFNKKIKKYFAR--------IGCFSI 668 RTGT SLK ALEKLYN CY++ E+ ++H+ H ++W SV ++ ++ + A I S+Y A D P + VYKDLMEIYP+AKV+LT RNSDDW+KSV+ TT+ + + K LF+ F ++ K + YK+PF+ L T+D +LK+ YE++N EVR +VP ERLLEFN EGWEPLC+FLNLP PNEP+PFVN+T++F + K R IGC SI Sbjct: 17 RTGTFSLKFALEKLYNCPCYHMAEILNHHKDHVKLWISVFDSGKMNEKTAGKIFSDYSATVDFPSAAVYKDLMEIYPNAKVVLTTRNSDDWVKSVKSTTLRNNMKTSFVHKILFYFNLGTEFPVMLDKMYLKAYKEPFDALRTDDELLKQCYEDFNEEVRKYVPRERLLEFNAKEGWEPLCRFLNLPVPNEPYPFVNTTKDFQLTIRGMMLKSVIRSGLVLSLTIGCLSI 246 The following BLAST results are available for this feature:
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 5
BLAST of Cell wall integrity and stress response component 1 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of Cell wall integrity and stress response component 1 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024477 ID=SMED30024477|Name=Cell wall integrity and stress response component 1|organism=Schmidtea mediterranea sexual|type=transcript|length=679bpback to top protein sequence of SMED30024477-orf-1 >SMED30024477-orf-1 ID=SMED30024477-orf-1|Name=SMED30024477-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=225bp RTGTNSLKIALEKLYNGKCYNIKEVFDYHQHHFEVWNSVLETEELRKDVAback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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