Guanine nucleotide-binding protein subunit gamma

Overview
NameGuanine nucleotide-binding protein subunit gamma
Smed IDSMED30024412
Length (bp)1170
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Guanine nucleotide-binding protein subunit gamma (SMED30024412) t-SNE clustered cells

Violin plots show distribution of expression levels for Guanine nucleotide-binding protein subunit gamma (SMED30024412) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Guanine nucleotide-binding protein subunit gamma (SMED30024412) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Guanine nucleotide-binding protein subunit gamma (SMED30024412) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024412

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
protonephridiaSMED30024412SMESG000014262.1 dd_Smed_v4_2883_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
nervous systemSMED30024412SMESG000014262.1 dd_Smed_v4_2883_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30024412SMESG000014262.1 dd_Smed_v4_2883_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
parenchymal cellSMED30024412SMESG000014262.1 dd_Smed_v4_2883_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
muscle cellSMED30024412SMESG000014262.1 dd_Smed_v4_2883_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Human
Match: GNG12 (G protein subunit gamma 12 [Source:HGNC Symbol;Acc:HGNC:19663])

HSP 1 Score: 57.7658 bits (138), Expect = 2.155e-10
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Human
Match: GNG7 (G protein subunit gamma 7 [Source:HGNC Symbol;Acc:HGNC:4410])

HSP 1 Score: 53.9138 bits (128), Expect = 4.340e-9
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    + +E L+    +ER+++SK   D M YC  +A +DPLL   P  ENPF +KK CIIL
Sbjct:    5 NNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPFKDKKPCIIL 68
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Human
Match: GNG2 (G protein subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4404])

HSP 1 Score: 47.3654 bits (111), Expect = 1.138e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            +AR+L E LK    ++R+++SK   D M YC  +A  DPLL P+   ENPF EKK  C IL
Sbjct:   11 QARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL 71
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Human
Match: GNG2 (G protein subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4404])

HSP 1 Score: 47.3654 bits (111), Expect = 1.138e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            +AR+L E LK    ++R+++SK   D M YC  +A  DPLL P+   ENPF EKK  C IL
Sbjct:   11 QARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL 71
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Human
Match: GNG2 (G protein subunit gamma 2 [Source:HGNC Symbol;Acc:HGNC:4404])

HSP 1 Score: 47.3654 bits (111), Expect = 1.138e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            +AR+L E LK    ++R+++SK   D M YC  +A  DPLL P+   ENPF EKK  C IL
Sbjct:   11 QARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL 71
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Zebrafish
Match: gng7 (guanine nucleotide binding protein (G protein), gamma 7 [Source:ZFIN;Acc:ZDB-GENE-040718-93])

HSP 1 Score: 55.8398 bits (133), Expect = 6.418e-10
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    + +E L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK CIIL
Sbjct:    5 NNIAQARKLVEQLRIEAGIERIKVSKAAADLMSYCEQHARSDPLLVGVPTSENPFKDKKPCIIL 68
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Zebrafish
Match: gng7 (guanine nucleotide binding protein (G protein), gamma 7 [Source:ZFIN;Acc:ZDB-GENE-040718-93])

HSP 1 Score: 55.8398 bits (133), Expect = 6.418e-10
Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    + +E L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK CIIL
Sbjct:    5 NNIAQARKLVEQLRIEAGIERIKVSKAAADLMSYCEQHARSDPLLVGVPTSENPFKDKKPCIIL 68
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Zebrafish
Match: gng12a (guanine nucleotide binding protein (G protein), gamma 12a [Source:ZFIN;Acc:ZDB-GENE-040426-2555])

HSP 1 Score: 51.6026 bits (122), Expect = 2.345e-8
Identity = 27/65 (41.54%), Postives = 36/65 (55.38%), Query Frame = 2 
Query:  110 QNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
             N +    R ++ L+    +ER+++SK   D M YC  NA  DPLL   P  ENPF +KK C IL
Sbjct:   12 SNNLAHARRMVQQLRVEASIERIKVSKASADLMRYCGENAKYDPLLMGIPASENPFKDKKPCTIL 76
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Zebrafish
Match: si:dkey-44g17.6 (si:dkey-44g17.6 [Source:ZFIN;Acc:ZDB-GENE-120215-200])

HSP 1 Score: 51.6026 bits (122), Expect = 2.481e-8
Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A  DPLL   P  ENPF +KK C IL
Sbjct:    9 NNIAQARRNVQQLRIEANVERIKVSKASADLMHYCSEHAKYDPLLMGIPASENPFKDKKPCTIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Zebrafish
Match: si:dkey-44g17.6 (si:dkey-44g17.6 [Source:ZFIN;Acc:ZDB-GENE-120215-200])

HSP 1 Score: 51.6026 bits (122), Expect = 2.481e-8
Identity = 27/64 (42.19%), Postives = 36/64 (56.25%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A  DPLL   P  ENPF +KK C IL
Sbjct:    9 NNIAQARRNVQQLRIEANVERIKVSKASADLMHYCSEHAKYDPLLMGIPASENPFKDKKPCTIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Xenopus
Match: mccc2 (methylcrotonoyl-CoA carboxylase 2 [Source:Xenbase;Acc:XB-GENE-985830])

HSP 1 Score: 55.8398 bits (133), Expect = 1.053e-9
Identity = 33/76 (43.42%), Postives = 42/76 (55.26%), Query Frame = 2 
Query:   77 MSAAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            MSA  T      N I    R ++ LK    +ER+++SK   D M YC  +A +DPLL   P  ENPF +KK CIIL
Sbjct:    1 MSAKTTS----TNNIAQARRTVQQLKVEASIERVKVSKASADLMRYCDEHAKNDPLLMGIPASENPFKDKKPCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Xenopus
Match: gng7 (guanine nucleotide binding protein (G protein), gamma 7 [Source:NCBI gene;Acc:549887])

HSP 1 Score: 50.447 bits (119), Expect = 7.280e-8
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    + +E L+    +ER+++SK   D M YC  +A +DPLL   P  ENPF +KK C IL
Sbjct:    5 NNIAQARKLVEQLRLEAGIERIKVSKAAADLMNYCEQHAKNDPLLVGVPTSENPFKDKKPCSIL 68
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Xenopus
Match: gng2 (guanine nucleotide binding protein (G protein), gamma 2 [Source:NCBI gene;Acc:448567])

HSP 1 Score: 47.3654 bits (111), Expect = 1.031e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            +AR+L E LK    ++R+++SK   D M YC  +A  DPLL P+   ENPF EKK  C IL
Sbjct:   11 QARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL 71
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Xenopus
Match: gng2 (guanine nucleotide binding protein (G protein), gamma 2 [Source:NCBI gene;Acc:448567])

HSP 1 Score: 47.3654 bits (111), Expect = 4.820e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            +AR+L E LK    ++R+++SK   D M YC  +A  DPLL P+   ENPF EKK  C IL
Sbjct:   85 QARKLVEQLKMEANIDRIKVSKAAADLMAYCEAHAKEDPLLTPVPASENPFREKKFFCAIL 145
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Mouse
Match: Gng12 (guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171])

HSP 1 Score: 58.5362 bits (140), Expect = 7.598e-11
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NSIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLMGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Mouse
Match: Gng12 (guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171])

HSP 1 Score: 58.5362 bits (140), Expect = 7.598e-11
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NSIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLMGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Mouse
Match: Gng12 (guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171])

HSP 1 Score: 58.5362 bits (140), Expect = 7.598e-11
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NSIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLMGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Mouse
Match: Gng12 (guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171])

HSP 1 Score: 58.5362 bits (140), Expect = 7.598e-11
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NSIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLMGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Mouse
Match: Gng12 (guanine nucleotide binding protein (G protein), gamma 12 [Source:MGI Symbol;Acc:MGI:1336171])

HSP 1 Score: 58.5362 bits (140), Expect = 7.598e-11
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NSIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLMGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. UniProt/SwissProt
Match: sp|Q9DAS9|GBG12_MOUSE (Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 OS=Mus musculus OX=10090 GN=Gng12 PE=1 SV=3)

HSP 1 Score: 58.5362 bits (140), Expect = 5.315e-10
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NSIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLMGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. UniProt/SwissProt
Match: sp|Q5RBQ0|GBG12_PONAB (Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 OS=Pongo abelii OX=9601 GN=GNG12 PE=3 SV=3)

HSP 1 Score: 57.7658 bits (138), Expect = 1.035e-9
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. UniProt/SwissProt
Match: sp|Q9UBI6|GBG12_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 OS=Homo sapiens OX=9606 GN=GNG12 PE=1 SV=3)

HSP 1 Score: 57.7658 bits (138), Expect = 1.035e-9
Identity = 29/64 (45.31%), Postives = 39/64 (60.94%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A SDPLL   P  ENPF +KK+CIIL
Sbjct:    9 NNIAQARRTVQQLRLEASIERIKVSKASADLMSYCEEHARSDPLLIGIPTSENPFKDKKTCIIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. UniProt/SwissProt
Match: sp|Q28024|GBG12_BOVIN (Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 OS=Bos taurus OX=9913 GN=GNG12 PE=1 SV=2)

HSP 1 Score: 55.0694 bits (131), Expect = 9.187e-9
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N I    R ++ L+    +ER+++SK   D M YC  +A +DPLL   P  ENPF +KK+C IL
Sbjct:    9 NNIAQARRTVQQLRMEASIERIKVSKASADLMSYCEEHARNDPLLMGIPTSENPFKDKKTCTIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. UniProt/SwissProt
Match: sp|O60262|GBG7_HUMAN (Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 OS=Homo sapiens OX=9606 GN=GNG7 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.084e-8
Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    + +E L+    +ER+++SK   D M YC  +A +DPLL   P  ENPF +KK CIIL
Sbjct:    5 NNIAQARKLVEQLRIEAGIERIKVSKAASDLMSYCEQHARNDPLLVGVPASENPFKDKKPCIIL 68
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. TrEMBL
Match: A0A183WNI6 (G protein gamma domain-containing protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS13689 PE=4 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.109e-11
Identity = 30/73 (41.10%), Postives = 48/73 (65.75%), Query Frame = 2 
Query:   80 SAAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 298
            +    + NPRQ EI+ K  ++  LK+ L++ R+ LSKTI D   +C+ NA +DPLL P K+NP+  ++SC ++
Sbjct:    7 AVDGDQTNPRQTEIEQKKLDIACLKHSLEINRVALSKTIWDIRNHCFTNAQNDPLLCPPKDNPYKTQRSCTVI 79
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. TrEMBL
Match: A0A095AWC1 (G protein gamma domain-containing protein (Fragment) OS=Schistosoma haematobium OX=6185 GN=MS3_07342 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.438e-10
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 
Query:   83 AAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 298
                + NPRQ EI+ K  ++   K+ L+L R+ LSKTI D   YC+ NA +DPLL P ++NP+  ++SC ++
Sbjct:    8 GEGDQNNPRQAEIEQKKLDIACYKHSLELNRIALSKTIWDIRNYCFTNAQNDPLLCPPRDNPYKSQRSCTVI 79
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. TrEMBL
Match: A0A430Q0K7 (G protein gamma domain-containing protein OS=Schistosoma bovis OX=6184 GN=DC041_0006548 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.438e-10
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 
Query:   83 AAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 298
                + NPRQ EI+ K  ++   K+ L+L R+ LSKTI D   YC+ NA +DPLL P ++NP+  ++SC ++
Sbjct:    8 GEGDQNNPRQAEIEQKKLDIACYKHSLELNRIALSKTIWDIRNYCFTNAQNDPLLCPPRDNPYKSQRSCTVI 79
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. TrEMBL
Match: A0A183Q2B7 (G protein gamma domain-containing protein OS=Schistosoma mattheei OX=31246 GN=SMTD_LOCUS20753 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.438e-10
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 
Query:   83 AAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 298
                + NPRQ EI+ K  ++   K+ L+L R+ LSKTI D   YC+ NA +DPLL P ++NP+  ++SC ++
Sbjct:    8 GEGDQNNPRQAEIEQKKLDIACYKHSLELNRIALSKTIWDIRNYCFTNAQNDPLLCPPRDNPYKSQRSCTVI 79
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. TrEMBL
Match: G4VPE9 (Guanine nucleotide-binding protein subunit gamma OS=Schistosoma mansoni OX=6183 GN=Smp_135940 PE=4 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.453e-10
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 2 
Query:   83 AAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 298
                + NPRQ EI+ K  ++   K+ L+L R+ LSKTI D   YC+ NA +DPLL P ++NP+  ++SC ++
Sbjct:    8 GEGDQNNPRQAEIEQKKLDIACYKHSLELNRIALSKTIWDIRNYCFTNAQNDPLLCPPRDNPYKSQRSCTVI 79
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Cavefish
Match: gng12a (guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 [Source:NCBI gene;Acc:107196998])

HSP 1 Score: 52.7582 bits (125), Expect = 7.545e-9
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            N +    R ++ L+    +ER+++SK   D M YC  +A  DPLL   P  ENPF +KK CIIL
Sbjct:   13 NNLAQARRTVQQLRVEAGIERIKVSKASADLMRYCSEHAKYDPLLTGIPASENPFKDKKPCIIL 76
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Cavefish
Match: gng7 (guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 [Source:NCBI gene;Acc:103035574])

HSP 1 Score: 51.2174 bits (121), Expect = 2.313e-8
Identity = 27/64 (42.19%), Postives = 37/64 (57.81%), Query Frame = 2 
Query:  113 NEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            N I    + +E L+    +ER+++SK   D M YC  +A SD LL   P  ENPF +KK CI+L
Sbjct:    5 NNIAQARKLVEQLRIEAGIERIKVSKAAADLMSYCEQHARSDALLVGVPTSENPFKDKKPCILL 68
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Cavefish
Match: si:dkey-44g17.6 (guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12-like [Source:NCBI gene;Acc:103038496])

HSP 1 Score: 50.0618 bits (118), Expect = 6.008e-7
Identity = 27/65 (41.54%), Postives = 36/65 (55.38%), Query Frame = 2 
Query:  110 QNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
             N I    R ++ L+    +ER+++SK   D M YC  +A  DPLL   P  ENPF +KK C IL
Sbjct:  108 SNNIAQARRIVQQLRIEANIERIKVSKASADLMHYCGEHARYDPLLMGIPASENPFKDKKPCTIL 172
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Cavefish
Match: gng2 (guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 [Source:NCBI gene;Acc:103030920])

HSP 1 Score: 47.3654 bits (111), Expect = 6.505e-7
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            +AR+L E LK    ++R+++SK   D M YC  +A  DPLL P+   ENPF EKK  C IL
Sbjct:   11 QARKLVEQLKMEANIDRIKVSKAAADLMSYCEAHAKEDPLLSPVPASENPFREKKFFCAIL 71
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Cavefish
Match: gng8 (G protein subunit gamma 8 [Source:NCBI gene;Acc:111193875])

HSP 1 Score: 44.669 bits (104), Expect = 5.221e-6
Identity = 24/58 (41.38%), Postives = 35/58 (60.34%), Query Frame = 2 
Query:  134 RELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKKS-CIIL 298
            + +E LK  + ++R+ +SK   + M YC  +A  DPL+ P+   ENPF EKK  C IL
Sbjct:   13 KTVEQLKLEVNIDRMMVSKAAAELMSYCETHAKEDPLVTPVASSENPFREKKIFCAIL 70
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Nematostella
Match: EDO36536 (Guanine nucleotide-binding protein subunit gamma [Source:UniProtKB/TrEMBL;Acc:A7SI97])

HSP 1 Score: 46.2098 bits (108), Expect = 4.578e-7
Identity = 22/66 (33.33%), Postives = 41/66 (62.12%), Query Frame = 2 
Query:  107 RQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLY--PLKENPFLEKKSCIIL 298
            +Q +I  +   ++ L+  LK+ R+++S+T  + M++C N+   DPL++  P  +NPF EK SC + 
Sbjct:    4 QQAQISTQRAVVDQLRGELKVTRMKVSQTSVELMKFCENHCAEDPLVHGLPPGDNPFREKTSCTLF 69
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Nematostella
Match: EDO48385 (Guanine nucleotide-binding protein subunit gamma [Source:UniProtKB/TrEMBL;Acc:A7RJI5])

HSP 1 Score: 45.0542 bits (105), Expect = 1.133e-6
Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 2 
Query:  134 RELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKKSCIIL 298
            + +E LK  L+++R+ +SK   D   YC  N   DPL+ P   K+NP+ EK  C +L
Sbjct:    8 KTVESLKYQLQIQRMPVSKCSNDLKSYCTQNQEHDPLICPPDKKDNPWAEKTKCTVL 64
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Medaka
Match: gng12a (guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 [Source:NCBI gene;Acc:101161831])

HSP 1 Score: 55.0694 bits (131), Expect = 1.211e-9
Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 2 
Query:   92 TEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLK--ENPFLEKKSCIIL 298
            + + P  N +    R ++ LK     ER+++SK   D M YC  NA +DPLL  ++  ENPF +KK C IL
Sbjct:    2 SSKAPSSNSVAHARRIVQQLKVEAGFERIKVSKASADLMTYCTENARNDPLLMGIQASENPFKDKKPCTIL 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Medaka
Match: gng8 (G protein subunit gamma 8 [Source:NCBI gene;Acc:110016380])

HSP 1 Score: 46.9802 bits (110), Expect = 7.523e-7
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 2 
Query:  134 RELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            + +E LK  + +ER+ +SK   + M YC ++A  DPL+ P+   ENPF EKK  C+IL
Sbjct:   13 KTVEQLKLEVNIERMMVSKAAAELMAYCESHAKEDPLVTPVPSSENPFREKKLFCVIL 70
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Medaka
Match: gng8 (G protein subunit gamma 8 [Source:NCBI gene;Acc:110016380])

HSP 1 Score: 46.9802 bits (110), Expect = 7.523e-7
Identity = 25/58 (43.10%), Postives = 37/58 (63.79%), Query Frame = 2 
Query:  134 RELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK-SCIIL 298
            + +E LK  + +ER+ +SK   + M YC ++A  DPL+ P+   ENPF EKK  C+IL
Sbjct:   13 KTVEQLKLEVNIERMMVSKAAAELMAYCESHAKEDPLVTPVPSSENPFREKKLFCVIL 70
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Medaka
Match: gng7 (guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 [Source:NCBI gene;Acc:101171292])

HSP 1 Score: 47.7506 bits (112), Expect = 1.609e-6
Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 2 
Query:  179 QLSKTIKDFMEYCYNNANSDPLL--YPLKENPFLEKKSCIIL 298
            Q+SK   D M YC  +A SDPLL   P  ENPF +KK CIIL
Sbjct:   82 QVSKAAADLMSYCDQHARSDPLLVGVPTSENPFKDKKPCIIL 123
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Medaka
Match: gng2 (G protein subunit gamma 2 [Source:NCBI gene;Acc:101157742])

HSP 1 Score: 45.0542 bits (105), Expect = 4.841e-6
Identity = 25/55 (45.45%), Postives = 35/55 (63.64%), Query Frame = 2 
Query:  128 KAREL-EYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPL--KENPFLEKK 283
            +AR+L E LK    ++R+++SK   + M YC  +A  DPLL P+   ENPF EKK
Sbjct:   18 QARKLVEQLKMEANIDRIKVSKAAAELMSYCEAHAKEDPLLSPVPASENPFREKK 72
[Close]
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Planmine SMEST
Match: SMESG000014262.1 (SMESG000014262.1)

HSP 1 Score: 148.673 bits (374), Expect = 1.805e-44
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 2 
Query:   77 MSAAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 298
            MSAAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL
Sbjct:    1 MSAAATEENPRQNEIDMKARELEYLKNILKLERLQLSKTIKDFMEYCYNNANSDPLLYPLKENPFLEKKSCIIL 74
The following BLAST results are available for this feature:
BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5
Match NameE-valueIdentityDescription
GNG122.155e-1045.31G protein subunit gamma 12 [Source:HGNC Symbol;Acc... [more]
GNG74.340e-943.75G protein subunit gamma 7 [Source:HGNC Symbol;Acc:... [more]
GNG21.138e-647.54G protein subunit gamma 2 [Source:HGNC Symbol;Acc:... [more]
GNG21.138e-647.54G protein subunit gamma 2 [Source:HGNC Symbol;Acc:... [more]
GNG21.138e-647.54G protein subunit gamma 2 [Source:HGNC Symbol;Acc:... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gng76.418e-1045.31guanine nucleotide binding protein (G protein), ga... [more]
gng76.418e-1045.31guanine nucleotide binding protein (G protein), ga... [more]
gng12a2.345e-841.54guanine nucleotide binding protein (G protein), ga... [more]
si:dkey-44g17.62.481e-842.19si:dkey-44g17.6 [Source:ZFIN;Acc:ZDB-GENE-120215-2... [more]
si:dkey-44g17.62.481e-842.19si:dkey-44g17.6 [Source:ZFIN;Acc:ZDB-GENE-120215-2... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4
Match NameE-valueIdentityDescription
mccc21.053e-943.42methylcrotonoyl-CoA carboxylase 2 [Source:Xenbase;... [more]
gng77.280e-842.19guanine nucleotide binding protein (G protein), ga... [more]
gng21.031e-647.54guanine nucleotide binding protein (G protein), ga... [more]
gng24.820e-647.54guanine nucleotide binding protein (G protein), ga... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5
Match NameE-valueIdentityDescription
Gng127.598e-1145.31guanine nucleotide binding protein (G protein), ga... [more]
Gng127.598e-1145.31guanine nucleotide binding protein (G protein), ga... [more]
Gng127.598e-1145.31guanine nucleotide binding protein (G protein), ga... [more]
Gng127.598e-1145.31guanine nucleotide binding protein (G protein), ga... [more]
Gng127.598e-1145.31guanine nucleotide binding protein (G protein), ga... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q9DAS9|GBG12_MOUSE5.315e-1045.31Guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
sp|Q5RBQ0|GBG12_PONAB1.035e-945.31Guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
sp|Q9UBI6|GBG12_HUMAN1.035e-945.31Guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
sp|Q28024|GBG12_BOVIN9.187e-942.19Guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
sp|O60262|GBG7_HUMAN2.084e-843.75Guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A183WNI64.109e-1141.10G protein gamma domain-containing protein OS=Trich... [more]
A0A095AWC11.438e-1041.67G protein gamma domain-containing protein (Fragmen... [more]
A0A430Q0K71.438e-1041.67G protein gamma domain-containing protein OS=Schis... [more]
A0A183Q2B71.438e-1041.67G protein gamma domain-containing protein OS=Schis... [more]
G4VPE91.453e-1041.67Guanine nucleotide-binding protein subunit gamma O... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gng12a7.545e-942.19guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
gng72.313e-842.19guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
si:dkey-44g17.66.008e-741.54guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
gng26.505e-747.54guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
gng85.221e-641.38G protein subunit gamma 8 [Source:NCBI gene;Acc:11... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO365364.578e-733.33Guanine nucleotide-binding protein subunit gamma ... [more]
EDO483851.133e-638.60Guanine nucleotide-binding protein subunit gamma ... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5
Match NameE-valueIdentityDescription
gng12a1.211e-939.44guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
gng87.523e-743.10G protein subunit gamma 8 [Source:NCBI gene;Acc:11... [more]
gng87.523e-743.10G protein subunit gamma 8 [Source:NCBI gene;Acc:11... [more]
gng71.609e-657.14guanine nucleotide-binding protein G(I)/G(S)/G(O) ... [more]
gng24.841e-645.45G protein subunit gamma 2 [Source:NCBI gene;Acc:10... [more]
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BLAST of Guanine nucleotide-binding protein subunit gamma vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000014262.11.805e-44100.00SMESG000014262.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024412 ID=SMED30024412|Name=Guanine nucleotide-binding protein subunit gamma|organism=Schmidtea mediterranea sexual|type=transcript|length=1170bp
ATATCATTTGATAGATTTGATAAATAACAAACAATTAACATTTTTAAATA
TTATATTTTATTAGCAATTGTTAATTATGTCTGCTGCAGCAACTGAAGAA
AATCCGCGTCAAAATGAAATTGATATGAAAGCTCGTGAATTGGAATATTT
AAAAAATATTCTTAAGTTGGAAAGATTACAATTAAGTAAAACTATCAAAG
ACTTCATGGAATATTGCTATAACAATGCCAATAGTGATCCATTACTCTAT
CCTTTAAAAGAAAATCCATTTTTGGAGAAAAAATCTTGTATAATTTTATG
ATTTAATTGGTTTTCACTAAATAAAACTGTTTCAATTTCTTAAAAAANNN
GGGTCTAGTTAAAAAACACAAGTAAATGTTTTCAATAATTAGGATCGAGT
ACATGTATTTTTTATTGAGACTGTAAATCAGTTACAAATCCCATTTTATG
TAAAATCACTATGGAGGTCAAAATGTACTATTCAAAATAAGGATACATAT
TTTTAATTAGACTGTAAAATTTTGGACAAAAATATTAAAACCCGTAATTG
TCGGCAGAATAATATTAATTCTCAATTGACGAAAAATTCAAAATACCATA
ATACTGAGATCACAAAATCTCATGTAGAAAAATCCTGACACATTACTGTG
ACTCGTATCACGATCAAATCAAACATTTTTTATAGTGTTTTTCATCGAGA
TTGTAAATTATTGTTAGATTCACCTCGGATTTTATACTCTTGTATAAAAC
CTAATTAATGACTAAATCCCAAAAGTCAGTATGTGCAACAATATCAAATC
ATTAATTACATATACCATTAGCCGCTCATCTCTCAACAATGATTCCCGAG
ATCTCATTTCTTTTCATTTAAAATTCAACTAGATGTTCAGGGTTGTCTGT
AGATTACTATGACCGTATTCAGTACCTGCTCGCTAATAAACATTGATATT
AGTCCAATGAAATAGAAAAGTTATCAAAAGAACGCTTAGTTGACCTCAGT
TGACCATAAGATATCTTTGTGGAGTCATAGGAAAATATTAGGAAACTGAA
ATCTATACAAGATACCAACGGTATAAAAACAACAAATGCGTTTATAAAAA
TTAGTCTCAAAATGAGTATAGGGACCTATTGCCTATGCCTATATTTTACT
ATCATATATTCATGATGTCA
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000099neuron
Vocabulary: INTERPRO
TermDefinition
IPR036284GGL_sf
IPR001770Gprotein-gamma
IPR015898G-protein_gamma-like_dom
Vocabulary: molecular function
TermDefinition
GO:0003924GTPase activity
GO:0004871signal transducer activity
GO:0030165PDZ domain binding
Vocabulary: cellular component
TermDefinition
GO:0005834heterotrimeric G-protein complex
GO:0005886plasma membrane
GO:0016020membrane
GO:0070062extracellular exosome
Vocabulary: biological process
TermDefinition
GO:0007186G-protein coupled receptor signaling pathway
GO:0007165signal transduction
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015898G-protein gamma-like domainSMARTSM00224GGL_4coord: 15..74
e-value: 5.4E-8
score: 42.6
IPR015898G-protein gamma-like domainPFAMPF00631G-gammacoord: 17..74
e-value: 1.2E-12
score: 47.7
IPR015898G-protein gamma-like domainPROSITEPS50058G_PROTEIN_GAMMAcoord: 11..74
score: 16.168
NoneNo IPR availableSMARTSM01224G_gamma_2coord: 11..74
e-value: 5.2E-13
score: 59.2
IPR036284G-protein gamma-like domain superfamilyGENE3DG3DSA:4.10.260.10coord: 3..74
e-value: 1.1E-13
score: 52.9
IPR036284G-protein gamma-like domain superfamilySUPERFAMILYSSF48670Transducin (heterotrimeric G protein), gamma chaincoord: 11..69
IPR001770G-protein, gamma subunitPANTHERPTHR13809GUANINE NUCLEOTIDE-BINDING PROTEIN GAMMA SUBUNITcoord: 12..74