Dynein light chain

Overview


Name	Dynein light chain
Smed ID	SMED30024394
Length (bp)	333

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Dynein light chain (SMED30024394) t-SNE clustered cells

Violin plots show distribution of expression levels for Dynein light chain (SMED30024394) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Dynein light chain (SMED30024394) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Dynein light chain (SMED30024394) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30024394

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Expressed In	Reference Transcript	Published Transcript	Transcriptome	Publication
parapharyngeal region	SMED30024394	SmedASXL_019015	SmedAsxl_ww_GCZZ01	PMID:27034770 Currie et al., 2016
pharynx	SMED30024394	dd_Smed_v4_898_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30024394	dd_Smed_v4_898_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30024394	dd_Smed_v4_898_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30024394	dd_Smed_v4_898_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30024394	dd_Smed_v4_898_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30024394	dd_Smed_v4_898_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30024394	Contig51992	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30024394	Contig51992	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30024394	dd_Smed_v6_898_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

[Close]

BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL2 (dynein light chain LC8-type 2 [Source:HGNC Symbol;Acc:HGNC:24596])

HSP 1 Score: 167.933 bits (424), Expect = 3.268e-55
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Human
Match: DYNLL1 (dynein light chain LC8-type 1 [Source:HGNC Symbol;Acc:HGNC:15476])

HSP 1 Score: 162.54 bits (410), Expect = 4.269e-53
Identity = 73/89 (82.02%), Postives = 84/89 (94.38%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-1 (Dynein light chain 1, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q22799])

HSP 1 Score: 166.777 bits (421), Expect = 3.102e-55
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM+D+MQ+ AI+ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM+D+MQ+ AI+ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM+D+MQ+ AI+ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MVDRKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-2 (Probable dynein light chain 2, cytoplasmic [Source:UniProtKB/Swiss-Prot;Acc:Q21557])

HSP 1 Score: 85.5001 bits (210), Expect = 5.222e-23
Identity = 36/89 (40.45%), Postives = 56/89 (62.92%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSE +  +K  DM D  ++  I+   +A   +NI+KD+AA++K+E DK F  TWH I G+ FGS V++E  HFI     +V ++++K G
Sbjct:    1 MSEEKIEVKETDMEDPQRDMVISVVREAQRLYNIDKDVAAFVKEELDKKFGATWHVICGKCFGSRVSYEMGHFILLKCNKVNVMIYKCG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Celegans
Match: dlc-5 (Dynein Light Chain [Source:UniProtKB/TrEMBL;Acc:Q65XS9])

HSP 1 Score: 83.9593 bits (206), Expect = 2.107e-21
Identity = 33/84 (39.29%), Postives = 57/84 (67.86%), Query Frame = 3

Query:   18 AVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            A ++++ M   M++ A + A +++  +++E DIA ++K  FD+ + P WHCI G++FGS+VT E   FIYF +G +A +LFK+ 
Sbjct:   58 ADVQHSRMPRHMEQEACSLAAKSIMTYHLEHDIARHLKMAFDREYGPDWHCICGKHFGSFVTFEPDSFIYFRIGTIAFMLFKTS 141

[Close]

BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070706)

HSP 1 Score: 167.162 bits (422), Expect = 3.413e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070704)

HSP 1 Score: 167.162 bits (422), Expect = 3.413e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0307065)

HSP 1 Score: 167.162 bits (422), Expect = 3.413e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0070707)

HSP 1 Score: 167.162 bits (422), Expect = 3.413e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Fly
Match: ctp (gene:FBgn0011760 transcript:FBtr0474174)

HSP 1 Score: 171.785 bits (434), Expect = 8.666e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A++ ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHET+HFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 167.162 bits (422), Expect = 3.844e-55
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A+  ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A+  ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2a (dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11])

HSP 1 Score: 166.777 bits (421), Expect = 5.462e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M++R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Zebrafish
Match: dynll2b (dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:ZDB-GENE-050320-132])

HSP 1 Score: 166.777 bits (421), Expect = 5.462e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M++R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M++R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Xenopus
Match: dynll1 (dynein light chain LC8-type 1 [Source:NCBI gene;Acc:448652])

HSP 1 Score: 168.703 bits (426), Expect = 1.259e-55
Identity = 77/89 (86.52%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM++EMQ+ A++ ATQA+EKFNIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Xenopus
Match: dynll2 (dynein light chain LC8-type 2 [Source:NCBI gene;Acc:100038056])

HSP 1 Score: 167.933 bits (424), Expect = 2.963e-55
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Xenopus
Match: ENSXETT00000015639.1 (pep primary_assembly:Xenopus_tropicalis_v9.1:2:48978690:48979872:1 gene:ENSXETG00000009974.1 transcript:ENSXETT00000015639.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 72.0182 bits (175), Expect = 4.316e-17
Identity = 35/92 (38.04%), Postives = 55/92 (59.78%), Query Frame = -2

Query:    3 FFLS*FE*KNCNLTQVEIDKMFGFMSYVTSKISSNDAMPSWIEAFVKFLFNISSNVFFDVEFFHCLRCVVYRRLLHFVSHVGIFNYGLTL*H 278
              L+ F+ +NCNL Q+++D++  FM Y+ +K+S+NDA+P        +L +I SNVF ++   HCL   V   LLH   HV I +  L++ H
Sbjct:    1 LLLARFKEENCNLAQIKVDEVLCFMCYIAAKVSANDAVP-------IYLLDIGSNVFLNIILLHCLCGTVNSILLHVFRHVSILDNSLSVRH 85

[Close]

BLAST of Dynein light chain vs. Ensembl Xenopus
Match: rnf181 (ring finger protein 181 [Source:Xenbase;Acc:XB-GENE-964051])

HSP 1 Score: 62.7734 bits (151), Expect = 1.474e-13
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 3

Query:   18 AVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAA-YIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIY-FYLGQVAILLFK 263
             +I++ DM +EM+   +     A EKF    + AA  IK+  DK F  +WH ++G  FG  +THE K+ +Y F+ G +AI ++K
Sbjct:   21 PLIRHTDMPEEMRVETMELCVTACEKFASNNESAAKMIKETMDKKFGSSWHVVIGEGFGFEITHEVKNLLYMFFGGSLAICVWK 104

[Close]

BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll2 (dynein light chain LC8-type 2 [Source:MGI Symbol;Acc:MGI:1915347])

HSP 1 Score: 167.933 bits (424), Expect = 2.244e-55
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Mouse
Match: Dynll1 (dynein light chain LC8-type 1 [Source:MGI Symbol;Acc:MGI:1861457])

HSP 1 Score: 162.54 bits (410), Expect = 2.931e-53
Identity = 73/89 (82.02%), Postives = 84/89 (94.38%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M +R+AVIKNADM++EMQ+ ++  ATQA+EK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEKDIAAHIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q78P75|DYL2_RAT (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.570e-54
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q9D0M5|DYL2_MOUSE (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.570e-54
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q96FJ2|DYL2_HUMAN (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.570e-54
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|Q3MHR3|DYL2_BOVIN (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 1.570e-54
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. UniProt/SwissProt
Match: sp|O02414|DYL1_HELCR (Dynein light chain LC6, flagellar outer arm OS=Heliocidaris crassispina OX=1043166 PE=3 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.998e-54
Identity = 76/89 (85.39%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM ++MQ+ A++ ATQA+EKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMPEDMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of Dynein light chain vs. TrEMBL
Match: A0A1I8JPP2 (Dynein light chain OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig022175g1 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 5.834e-54
Identity = 80/89 (89.89%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM+DEMQ+ A+  ATQAMEKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSDEMQQDAVECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. TrEMBL
Match: A0A267E3S3 (Dynein light chain OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig022175g2 PE=3 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 3.093e-53
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM++EMQ+ A+  ATQAMEKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSEEMQQDAVECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. TrEMBL
Match: A0A3Q3XFM0 (Dynein light chain OS=Mola mola OX=94237 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 5.911e-53
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+++AVIKNADM+D+MQ+ A++YA QAMEKFNIEKDIAAY+KKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDKKAVIKNADMSDDMQQDAVDYAMQAMEKFNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. TrEMBL
Match: A0A267DWX3 (Dynein light chain OS=Macrostomum lignano OX=282301 GN=BOX15_Mlig013499g1 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 8.584e-53
Identity = 77/89 (86.52%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM+++MQ+ A++ ATQAMEKFN+EKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQAMEKFNVEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. TrEMBL
Match: T1JJG1 (Dynein light chain OS=Strigamia maritima OX=126957 PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 9.122e-53
Identity = 77/89 (86.52%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM++EMQ+ A++ ATQA+EKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    8 MSDRKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 96

[Close]

BLAST of Dynein light chain vs. Ensembl Cavefish
Match: ENSAMXT00000047143.1 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:103041528])

HSP 1 Score: 166.777 bits (421), Expect = 4.629e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M++R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dynll2b (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:103041528])

HSP 1 Score: 166.777 bits (421), Expect = 4.629e-55
Identity = 75/89 (84.27%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M++R+AVIKNADM+++MQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTDRKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dynll1 (dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1961])

HSP 1 Score: 149.058 bits (375), Expect = 1.088e-47
Identity = 67/80 (83.75%), Postives = 76/80 (95.00%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQ 242
            MS+R+AVIKNADM++EMQ+ A+  ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQ
Sbjct:    1 MSDRKAVIKNADMSEEMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQ 80

[Close]

BLAST of Dynein light chain vs. Ensembl Cavefish
Match: ENSAMXT00000025088.2 (pep primary_assembly:Astyanax_mexicanus-2.0:6:35277932:35282302:-1 gene:ENSAMXG00000024374.2 transcript:ENSAMXT00000025088.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 64.3142 bits (155), Expect = 2.281e-14
Identity = 31/87 (35.63%), Postives = 51/87 (58.62%), Query Frame = -2

Query:    3 KNCNLTQVEIDKMFGFMSYVTSKISSNDAMPSWIEAFVKF---LFNISSNVFFDVEFFHCLRCVVYRRLLHFVSHVGIFNYGLTL*H 254
            +NC+L QVE+D++ G +  V +++ ++DA+P  +   VK    LF++ S+V  DV F   L       LLH + HV IF++ L + H
Sbjct:    9 QNCHLAQVEVDEVLGLVGDVAAEVPAHDAVPGGVVLLVKLLTHLFDVGSDVLLDVVFLQSLSGTFNSILLHLLRHVRIFDHCLPVRH 95

[Close]

BLAST of Dynein light chain vs. Ensembl Cavefish
Match: dnal4b (dynein axonemal light chain 4 [Source:NCBI gene;Acc:103029781])

HSP 1 Score: 63.929 bits (154), Expect = 3.208e-14
Identity = 31/83 (37.35%), Postives = 49/83 (59.04%), Query Frame = 3

Query:   21 VIKNADMTDEMQEAAINYATQAMEKFNIEKDIAA-YIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIY-FYLGQVAILLFK 263
            +I++ DM +EM+   +     A EKF    + AA  IK+  DK F  +WH ++G  FG  VTHE K+ +Y F+ G +A+ ++K
Sbjct:   22 LIRHTDMPEEMRVETMELCVTACEKFATNNESAAKMIKESMDKKFGSSWHVVIGEGFGFEVTHEVKNLLYMFFGGSLAVCVWK 104

[Close]

BLAST of Dynein light chain vs. Ensembl Yeast
Match: DYN2 (Cytoplasmic light chain dynein, microtubule motor protein; required for intracellular transport and cell division; involved in mitotic spindle positioning; forms complex with dynein intermediate chain Pac11p that promotes Dyn1p homodimerization, potentiates motor processivity; Dyn2p-Pac11p complex important for interaction of dynein motor complex with dynactin complex; acts as molecular glue to dimerize, stabilize Nup82-Nsp1-Nup159 complex module of cytoplasmic pore filaments [Source:SGD;Acc:S000002832])

HSP 1 Score: 100.138 bits (248), Expect = 1.378e-29
Identity = 39/87 (44.83%), Postives = 64/87 (73.56%), Query Frame = 3

Query:    6 SERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKS 266
            ++   ++K +D+TD+++E  +  +  A++K+ +E+DIA  +KK+ D  +  TWH IVG+NFGSYVTHE  HF+YFY+G +A L+FK+
Sbjct:    5 NKSTPIVKASDITDKLKEDILTISKDALDKYQLERDIAGTVKKQLDVKYGNTWHVIVGKNFGSYVTHEKGHFVYFYIGPLAFLVFKT 91

[Close]

BLAST of Dynein light chain vs. Ensembl Nematostella
Match: EDO44582 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RVI5])

HSP 1 Score: 165.622 bits (418), Expect = 5.119e-55
Identity = 77/89 (86.52%), Postives = 83/89 (93.26%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM ++MQ  AI  ATQA+EKFNIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMAEDMQTDAIECATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Nematostella
Match: EDO38557 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SCP2])

HSP 1 Score: 66.6254 bits (161), Expect = 9.410e-16
Identity = 33/83 (39.76%), Postives = 50/83 (60.24%), Query Frame = 3

Query:   21 VIKNADMTDEMQEAAINYATQAMEKFNIEKDIAA-YIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIY-FYLGQVAILLFK 263
            +I+ +DM DEM+  A+     A EKF+   + AA  IK+  DK F  +WH +VG  FG  +THE ++ +Y F+ G  AI ++K
Sbjct:   26 LIRYSDMNDEMRTEAMELCVTACEKFSNNNETAAKMIKESMDKKFGASWHAVVGEGFGFEITHEVRNLLYMFFGGTTAICIWK 108

[Close]

BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000005747.2 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101162462])

HSP 1 Score: 167.933 bits (424), Expect = 1.658e-55
Identity = 76/89 (85.39%), Postives = 86/89 (96.63%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            M++R+AVIKNADM++EMQ+ A++ ATQAMEK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTDRKAVIKNADMSEEMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Medaka
Match: DYNLL2 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101174042])

HSP 1 Score: 166.777 bits (421), Expect = 4.550e-55
Identity = 75/89 (84.27%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+++AVIKNADM+DEMQ+ A++ A QAMEK+NIEKDIAAY+KKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDKKAVIKNADMSDEMQQDAVDCAMQAMEKYNIEKDIAAYVKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Medaka
Match: dynll1 (dynein light chain 2, cytoplasmic [Source:NCBI gene;Acc:101171417])

HSP 1 Score: 165.622 bits (418), Expect = 1.131e-54
Identity = 75/89 (84.27%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MS+R+AVIKNADM+++MQ+ A+  ATQA+EK+NIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSDRKAVIKNADMSEDMQQDAVECATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000006686.2 (pep primary_assembly:ASM223467v1:14:12601680:12602092:1 gene:ENSORLG00000005302.2 transcript:ENSORLT00000006686.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 67.3958 bits (163), Expect = 1.254e-15
Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = -2

Query:   15 KNCNLTQVEIDKMFGFMSYVTSKISSNDAMPSWIEAFVKFL-----FNISSNVFFDVEFFHCLRCVVYRRLLHFVSHVGIFNYGL 254
            +N +LTQVE+D+M   + ++ +K+  N+A+P  +   VKFL      +I SN+F D+   H L   V+  LLHF+ HV IF++ L
Sbjct:   24 QNSHLTQVEVDEMLRLVGHIATKVPPNNAVPCRVVFLVKFLDPTYLLDICSNIFLDIVLLHGLHGTVHCILLHFIRHVCIFDHRL 108

[Close]

BLAST of Dynein light chain vs. Ensembl Medaka
Match: ENSORLT00000028916.1 (pep primary_assembly:ASM223467v1:9:6243543:6247014:-1 gene:ENSORLG00000022487.1 transcript:ENSORLT00000028916.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 65.0846 bits (157), Expect = 7.503e-15
Identity = 34/92 (36.96%), Postives = 56/92 (60.87%), Query Frame = -2

Query:    3 FFLS*FE*KNCNLTQVEIDKMFGFMSYVTSKISSNDAMPSWIEAFVKFLFNISSNVFFDVEFFHCLRCVVYRRLLHFVSHVGIFNYGLTL*H 278
              LS  E +N +LTQVE+++M G +S+V +++  N+A+PS +   V+ L     +VF DV     L   ++  LLH + HVGIF++ L++ H
Sbjct:    1 MLLSRLEQQNGHLTQVEVNEMLGLVSHVAAEVPPNNAVPSRVVFLVELL-----DVFLDVVLLQGLCGTLHGVLLHVLRHVGIFDHCLSVRH 87

[Close]

BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000005286.1 (SMESG000005286.1)

HSP 1 Score: 188.348 bits (477), Expect = 9.334e-64
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000073811.1 (SMESG000073811.1)

HSP 1 Score: 170.244 bits (430), Expect = 1.506e-56
Identity = 79/89 (88.76%), Postives = 85/89 (95.51%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSERQAVIKNADM ++MQEAA+N AT AMEK+NIEKDIAA+IKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERQAVIKNADMQEDMQEAAVNCATTAMEKYNIEKDIAAFIKKEFDKLYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000003543.1 (SMESG000003543.1)

HSP 1 Score: 167.548 bits (423), Expect = 2.019e-55
Identity = 78/88 (88.64%), Postives = 82/88 (93.18%), Query Frame = 3

Query:    6 SERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            S R+AVIKNADM D+MQ+ AI  ATQAMEKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    4 SSRKAVIKNADMADDMQQEAIECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91

[Close]

BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000017229.1 (SMESG000017229.1)

HSP 1 Score: 166.007 bits (419), Expect = 7.655e-55
Identity = 75/89 (84.27%), Postives = 84/89 (94.38%), Query Frame = 3

Query:    3 MSERQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            MSER+AVIKNADM+D+MQ+ AI+ A QAMEK+N+EKDIAAYIKKEFDK +NPTWH IVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMSDDMQQEAIDVALQAMEKYNVEKDIAAYIKKEFDKKYNPTWHAIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of Dynein light chain vs. Planmine SMEST
Match: SMESG000043518.1 (SMESG000043518.1)

HSP 1 Score: 163.31 bits (412), Expect = 8.329e-54
Identity = 75/86 (87.21%), Postives = 82/86 (95.35%), Query Frame = 3

Query:   12 RQAVIKNADMTDEMQEAAINYATQAMEKFNIEKDIAAYIKKEFDKSFNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 269
            R+AVIKNADM+++MQ+ A+  ATQAMEKFNIEKDIAAYIKKEFDK +NPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    6 RKAVIKNADMSEDMQQDAVECATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 91

The following BLAST results are available for this feature:

BLAST of Dynein light chain vs. Ensembl Human
BLAST of Dynein light chain vs. Ensembl Celegans
BLAST of Dynein light chain vs. Ensembl Fly
BLAST of Dynein light chain vs. Ensembl Zebrafish
BLAST of Dynein light chain vs. Ensembl Xenopus
BLAST of Dynein light chain vs. Ensembl Mouse
BLAST of Dynein light chain vs. UniProt/SwissProt
BLAST of Dynein light chain vs. TrEMBL
BLAST of Dynein light chain vs. Ensembl Cavefish
BLAST of Dynein light chain vs. Ensembl Sea Lamprey
BLAST of Dynein light chain vs. Ensembl Yeast
BLAST of Dynein light chain vs. Ensembl Nematostella
BLAST of Dynein light chain vs. Ensembl Medaka
BLAST of Dynein light chain vs. Planmine SMEST

BLAST of Dynein light chain vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
DYNLL2	3.268e-55	85.39	dynein light chain LC8-type 2 [Source:HGNC Symbol;...	[more]
DYNLL1	4.269e-53	82.02	dynein light chain LC8-type 1 [Source:HGNC Symbol;...	[more]
DYNLL1	4.269e-53	82.02	dynein light chain LC8-type 1 [Source:HGNC Symbol;...	[more]
DYNLL1	4.269e-53	82.02	dynein light chain LC8-type 1 [Source:HGNC Symbol;...	[more]
DYNLL1	4.269e-53	82.02	dynein light chain LC8-type 1 [Source:HGNC Symbol;...	[more]

BLAST of Dynein light chain vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
dlc-1	3.102e-55	85.39	Dynein light chain 1, cytoplasmic [Source:UniProt...	[more]
dlc-1	3.102e-55	85.39	Dynein light chain 1, cytoplasmic [Source:UniProt...	[more]
dlc-1	3.102e-55	85.39	Dynein light chain 1, cytoplasmic [Source:UniProt...	[more]
dlc-2	5.222e-23	40.45	Probable dynein light chain 2, cytoplasmic [Sourc...	[more]
dlc-5	2.107e-21	39.29	Dynein Light Chain [Source:UniProtKB/TrEMBL;Acc:Q...	[more]

BLAST of Dynein light chain vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ctp	3.413e-55	84.27	gene:FBgn0011760 transcript:FBtr0070706	[more]
ctp	3.413e-55	84.27	gene:FBgn0011760 transcript:FBtr0070704	[more]
ctp	3.413e-55	84.27	gene:FBgn0011760 transcript:FBtr0307065	[more]
ctp	3.413e-55	84.27	gene:FBgn0011760 transcript:FBtr0070707	[more]
ctp	8.666e-55	84.27	gene:FBgn0011760 transcript:FBtr0474174	[more]

BLAST of Dynein light chain vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
dynll1	3.844e-55	85.39	dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z...	[more]
dynll1	3.844e-55	85.39	dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z...	[more]
dynll2a	5.462e-55	84.27	dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:...	[more]
dynll2b	5.462e-55	84.27	dynein, light chain, LC8-type 2b [Source:ZFIN;Acc:...	[more]
dynll2a	5.462e-55	84.27	dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:...	[more]

BLAST of Dynein light chain vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 4


Match Name	E-value	Identity	Description
dynll1	1.259e-55	86.52	dynein light chain LC8-type 1 [Source:NCBI gene;Ac...	[more]
dynll2	2.963e-55	85.39	dynein light chain LC8-type 2 [Source:NCBI gene;Ac...	[more]
ENSXETT00000015639.1	4.316e-17	38.04	pep primary_assembly:Xenopus_tropicalis_v9.1:2:489...	[more]
rnf181	1.474e-13	36.90	ring finger protein 181 [Source:Xenbase;Acc:XB-GEN...	[more]

BLAST of Dynein light chain vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Dynll2	2.244e-55	85.39	dynein light chain LC8-type 2 [Source:MGI Symbol;A...	[more]
Dynll2	2.244e-55	85.39	dynein light chain LC8-type 2 [Source:MGI Symbol;A...	[more]
Dynll2	2.244e-55	85.39	dynein light chain LC8-type 2 [Source:MGI Symbol;A...	[more]
Dynll1	2.931e-53	82.02	dynein light chain LC8-type 1 [Source:MGI Symbol;A...	[more]
Dynll1	2.931e-53	82.02	dynein light chain LC8-type 1 [Source:MGI Symbol;A...	[more]

BLAST of Dynein light chain vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q78P75\|DYL2_RAT	1.570e-54	85.39	Dynein light chain 2, cytoplasmic OS=Rattus norveg...	[more]
sp\|Q9D0M5\|DYL2_MOUSE	1.570e-54	85.39	Dynein light chain 2, cytoplasmic OS=Mus musculus ...	[more]
sp\|Q96FJ2\|DYL2_HUMAN	1.570e-54	85.39	Dynein light chain 2, cytoplasmic OS=Homo sapiens ...	[more]
sp\|Q3MHR3\|DYL2_BOVIN	1.570e-54	85.39	Dynein light chain 2, cytoplasmic OS=Bos taurus OX...	[more]
sp\|O02414\|DYL1_HELCR	1.998e-54	85.39	Dynein light chain LC6, flagellar outer arm OS=Hel...	[more]

BLAST of Dynein light chain vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A1I8JPP2	5.834e-54	89.89	Dynein light chain OS=Macrostomum lignano OX=28230...	[more]
A0A267E3S3	3.093e-53	88.76	Dynein light chain OS=Macrostomum lignano OX=28230...	[more]
A0A3Q3XFM0	5.911e-53	85.39	Dynein light chain OS=Mola mola OX=94237 PE=3 SV=1	[more]
A0A267DWX3	8.584e-53	86.52	Dynein light chain OS=Macrostomum lignano OX=28230...	[more]
T1JJG1	9.122e-53	86.52	Dynein light chain OS=Strigamia maritima OX=126957...	[more]

BLAST of Dynein light chain vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSAMXT00000047143.1	4.629e-55	84.27	dynein light chain 2, cytoplasmic [Source:NCBI gen...	[more]
dynll2b	4.629e-55	84.27	dynein light chain 2, cytoplasmic [Source:NCBI gen...	[more]
dynll1	1.088e-47	83.75	dynein, light chain, LC8-type 1 [Source:ZFIN;Acc:Z...	[more]
ENSAMXT00000025088.2	2.281e-14	35.63	pep primary_assembly:Astyanax_mexicanus-2.0:6:3527...	[more]
dnal4b	3.208e-14	37.35	dynein axonemal light chain 4 [Source:NCBI gene;Ac...	[more]

BLAST of Dynein light chain vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Dynein light chain vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
DYN2	1.378e-29	44.83	Cytoplasmic light chain dynein, microtubule motor ...	[more]

BLAST of Dynein light chain vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2


Match Name	E-value	Identity	Description
EDO44582	5.119e-55	86.52	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO38557	9.410e-16	39.76	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Dynein light chain vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ENSORLT00000005747.2	1.658e-55	85.39	dynein light chain 2, cytoplasmic [Source:NCBI gen...	[more]
DYNLL2	4.550e-55	84.27	dynein light chain 2, cytoplasmic [Source:NCBI gen...	[more]
dynll1	1.131e-54	84.27	dynein light chain 2, cytoplasmic [Source:NCBI gen...	[more]
ENSORLT00000006686.2	1.254e-15	38.82	pep primary_assembly:ASM223467v1:14:12601680:12602...	[more]
ENSORLT00000028916.1	7.503e-15	36.96	pep primary_assembly:ASM223467v1:9:6243543:6247014...	[more]

BLAST of Dynein light chain vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000005286.1	9.334e-64	100.00	SMESG000005286.1	[more]
SMESG000073811.1	1.506e-56	88.76	SMESG000073811.1	[more]
SMESG000003543.1	2.019e-55	88.64	SMESG000003543.1	[more]
SMESG000017229.1	7.655e-55	84.27	SMESG000017229.1	[more]
SMESG000043518.1	8.329e-54	87.21	SMESG000043518.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence

transcript sequence

>SMED30024394 ID=SMED30024394|Name=Dynein light chain|organism=Schmidtea mediterranea sexual|type=transcript|length=333bp
CAATGTCAGAGCGTCAAGCCGTAATTAAAAATGCCGACATGACTGACGAA
ATGCAGGAGGCGGCGATAAACTACGCAACGCAGGCAATGGAAAAATTCAA
CATCGAAAAAGACATTGCTGCTTATATTAAAAAGGAATTTGACAAAAGCT
TCAATCCAACTTGGCATTGCATCGTTGGAAGAAATTTTGGAAGTTACGTA
ACTCATGAAACCAAACATTTTATCTATTTCTACTTGGGTCAAGTTGCAAT
TCTTCTATTCAAATCAGGATAAAAAAAATATTCCCAATTTTGTTTTTGTA
TTCGTGTTATAGAAATAATATTTCTGTTTCGTC

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000016	pharynx
PLANA:0000020	protonephridia
PLANA:0000420	parapharyngeal region
PLANA:0002032	epidermal cell
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR037177	DLC_sf
IPR001372	Dynein_light_chain_typ-1/2
IPR019763	Dynein_light_1/2_CS

Vocabulary: **cellular component**
Term	Definition
GO:0030286	dynein complex
GO:0005875	microtubule associated complex
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005813	centrosome
GO:0005856	cytoskeleton
GO:0005868	cytoplasmic dynein complex
GO:0005874	microtubule
GO:0016020	membrane
GO:0016459	myosin complex

Vocabulary: **biological process**
Term	Definition
GO:0007017	microtubule-based process
GO:0006810	transport
GO:0008039	synaptic target recognition

Vocabulary: **molecular function**
Term	Definition
GO:0003774	motor activity
GO:0005515	protein binding
GO:0008092	cytoskeletal protein binding

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..88 e-value: 7.5E-59 score: 211.5
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 6..88 e-value: 2.8E-41 score: 139.7
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..89
IPR037177	Dynein light chain superfamily	GENE3D	G3DSA:3.30.740.10		coord: 1..89 e-value: 3.3E-46 score: 157.3
IPR037177	Dynein light chain superfamily	SUPERFAMILY	SSF54648	DLC	coord: 1..89
None	No IPR available	PANTHER	PTHR11886:SF62	DYNEIN LIGHT CHAIN	coord: 1..89
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 55..69

Main menu

Dynein light chain

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 10

Owlery

blazegraph-runner