mitochondrial import receptor subunit TOM22 homolog

Overview
Namemitochondrial import receptor subunit TOM22 homolog
Smed IDSMED30024389
Length (bp)685
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of mitochondrial import receptor subunit TOM22 homolog (SMED30024389) t-SNE clustered cells

Violin plots show distribution of expression levels for mitochondrial import receptor subunit TOM22 homolog (SMED30024389) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of mitochondrial import receptor subunit TOM22 homolog (SMED30024389) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for mitochondrial import receptor subunit TOM22 homolog (SMED30024389) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024389

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
X1 cellSMED30024389 SmedASXL_018919SmedAsxl_ww_GCZZ01PMID:26114597
Zhu et al., 2015		FACS sorted cell population asexual adult RNA-sequencing evidence
neoblastSMED30024389 dd_Smed_v4_2455_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Celegans
Match: tomm-22 (Mitochondrial import receptor subunit TOM22 homolog [Source:UniProtKB/Swiss-Prot;Acc:O17287])

HSP 1 Score: 43.8986 bits (102), Expect = 6.877e-6
Identity = 22/80 (27.50%), Postives = 42/80 (52.50%), Query Frame = 3 
Query:  171 ERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQS 410
            ERI GL EM P+++RS    +   S   +K  ++L ++  W++++  ++   P + E  R         QQR+++ GP +
Sbjct:   22 ERIEGLGEMFPDALRSAVHSTVDWSIWGVKGVFSLTKSTIWVVSTTSLIAFLPYIIEKERSDLEKTQVAQQRQMLLGPSA 101
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Fly
Match: mge (gene:FBgn0035473 transcript:FBtr0073175)

HSP 1 Score: 56.6102 bits (135), Expect = 3.507e-10
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 3 
Query:  171 ERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESGFAIP----PTIR 443
            ER  GLTEM PE VR+     +S + K +K  Y+   NA WI  +  V+   P +FE  R +       QQ++++ GP S  G   P    P IR
Sbjct:   28 ERFWGLTEMFPEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSAVILFAPVIFETERAQMEELHKSQQKQVLLGPGSAMGPGGPSPSLPLIR 122
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Fly
Match: mge (gene:FBgn0035473 transcript:FBtr0073176)

HSP 1 Score: 55.8398 bits (133), Expect = 1.126e-9
Identity = 34/95 (35.79%), Postives = 47/95 (49.47%), Query Frame = 3 
Query:  171 ERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESGFAIP----PTIR 443
            ER  GLTEM PE VR+     +S + K +K  Y+   NA WI  +  V+   P +FE  R +       QQ++++ GP S  G   P    P IR
Sbjct:   54 ERFWGLTEMFPEPVRNAVGAVSSATVKSVKGFYSFSCNASWIFFTSAVILFAPVIFETERAQMEELHKSQQKQVLLGPGSAMGPGGPSPSLPLIR 148
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Zebrafish
Match: tomm22 (translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810])

HSP 1 Score: 45.4394 bits (106), Expect = 6.064e-6
Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFEN 344
             + ER+ GLTEM P+SVRS    SA  S    KK Y+  R A W+  +  ++   P VFE 
Sbjct:   35 TMLERLWGLTEMFPDSVRSAAEVSAHCSLSAAKKLYSFSRAALWVGTTSFMILVLPVVFET 95
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Zebrafish
Match: tomm22 (translocase of outer mitochondrial membrane 22 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-9810])

HSP 1 Score: 45.4394 bits (106), Expect = 6.064e-6
Identity = 25/61 (40.98%), Postives = 33/61 (54.10%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFEN 344
             + ER+ GLTEM P+SVRS    SA  S    KK Y+  R A W+  +  ++   P VFE 
Sbjct:   35 TMLERLWGLTEMFPDSVRSAAEVSAHCSLSAAKKLYSFSRAALWVGTTSFMILVLPVVFET 95
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Xenopus
Match: b3galt5.4 (beta-1,3-galactosyltransferase 5 gene 4 [Source:Xenbase;Acc:XB-GENE-1013344])

HSP 1 Score: 46.2098 bits (108), Expect = 4.378e-6
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESGFAIPP 434
             L ER+ GLTEM PES+R+    S   S    KK Y+  R A WI  +  ++   P VFE  + +   +   QQR+++ GP +     +PP
Sbjct:   31 TLSERLWGLTEMFPESLRTAAGASMDLSICAAKKFYSFSRTALWIGTTSFMILVLPVVFETEKLQMEQQQQLQQRQILLGPSTGMSGPLPP 121
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. TrEMBL
Match: A0A2H1BSF2 (Translocase of outer mitochondrial membrane 22 OS=Fasciola hepatica OX=6192 GN=D915_010995 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 1.187e-9
Identity = 34/82 (41.46%), Postives = 48/82 (58.54%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQ 407
             L ER++GLTEM PESVR   S +AS ++  IK +Y+L R+  W LAS   +   P   E  R +   ++A  QR +M GP+
Sbjct:   70 TLVERLMGLTEMFPESVRRTFSSAASMTFSGIKSTYSLSRSVSWFLASTATLCFLPLFLELERVQTEEQEAVHQRTMMLGPR 151
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. TrEMBL
Match: A0A210Q3C0 (Mitochondrial import receptor subunit TOM22-like OS=Mizuhopecten yessoensis OX=6573 GN=KP79_PYT06550 PE=4 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 1.845e-9
Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQS 410
             L ER+IGLTEM PE+VR++   +A+ +    K SY   R+A W++AS   +   P VFE+ R +      +Q+R+++ GP +
Sbjct:   30 TLRERLIGLTEMFPENVRTVCGNAATFAMAASKASYGFTRSALWVVASAATILTLPVVFESERAQHQEMQREQERQILLGPNA 112
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. TrEMBL
Match: V4CN23 (Uncharacterized protein (Fragment) OS=Lottia gigantea OX=225164 GN=LOTGIDRAFT_110138 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.761e-9
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQS 410
             L ER++GLTEM PE VR     + S S+ + K S+TL R   W+LAS   +   P +FE+   +   ++  QQR+++ GP +
Sbjct:    5 TLSERLMGLTEMFPEGVRKTCGSAVSLSFSLAKTSFTLGRGLLWVLASSATILILPVMFESEMAQMKEQELQQQRQMLLGPNA 87
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. TrEMBL
Match: A0A1B6JPM7 (Uncharacterized protein OS=Homalodisca liturata OX=320908 GN=g.8101 PE=4 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 8.750e-9
Identity = 36/83 (43.37%), Postives = 46/83 (55.42%), Query Frame = 3 
Query:  171 ERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESG 419
            ER+IGLTEM PE V + T   A  +   IK  Y L RNA WI AS  ++  GP +FE  R +       QQ++ + GP S SG
Sbjct:   45 ERLIGLTEMFPEPVVNFTVSVARTTKAGIKGFYNLSRNALWIAASSSLILFGPLLFEVERAQLEESQRSQQKQFLLGPNSMSG 127
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. TrEMBL
Match: A0A0R3WFH5 (Uncharacterized protein OS=Taenia asiatica OX=60517 GN=TASK_LOCUS9619 PE=4 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 1.168e-8
Identity = 28/81 (34.57%), Postives = 48/81 (59.26%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGP 404
             L ER+IGLTEM P+ +RS T+ +   +   ++ +Y+L R + W  AS++ V   P + E  R++   ++A + R +M GP
Sbjct:   69 TLMERLIGLTEMFPDRLRSATASAFGGTMGAVRSAYSLLRASAWFAASIMTVCMLPLMLELERNQMEEQEASEHRSMMLGP 149
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Cavefish
Match: tomm22 (translocase of outer mitochondrial membrane 22 [Source:NCBI gene;Acc:103023388])

HSP 1 Score: 45.8246 bits (107), Expect = 3.428e-6
Identity = 23/61 (37.70%), Postives = 35/61 (57.38%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFEN 344
             + ER+ GLTEM P+++RS    SA  S  + KK Y+  R+A W+  +  ++   P VFE 
Sbjct:   32 TMLERLWGLTEMFPDTLRSAAEVSAQCSLSVAKKLYSFSRSALWVGTTSFMILVLPVVFET 92
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Medaka
Match: tomm22 (translocase of outer mitochondrial membrane 22 [Source:NCBI gene;Acc:101166421])

HSP 1 Score: 47.7506 bits (112), Expect = 8.286e-7
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 3 
Query:  162 NLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFEN 344
             L ER+ GLTEM PE+VR+    SA  S  ++KK Y+  R+A W+  +  ++   P VFE 
Sbjct:   36 TLAERLWGLTEMFPETVRTAAEVSAQCSVSLLKKFYSFSRSALWVGTTSFMILVLPVVFET 96
[Close]
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Planmine SMEST
Match: SMESG000027748.1 (SMESG000027748.1)

HSP 1 Score: 201.06 bits (510), Expect = 1.800e-66
Identity = 110/110 (100.00%), Postives = 110/110 (100.00%), Query Frame = 3 
Query:  120 MSLSIXXXXXXXXXNLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESGFAIPPTIRAN 449
            MSLSIEDEELLEDENLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESGFAIPPTIRAN
Sbjct:    1 MSLSIEDEELLEDENLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSYTLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESGFAIPPTIRAN 110
The following BLAST results are available for this feature:
BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 1
Match NameE-valueIdentityDescription
tomm-226.877e-627.50Mitochondrial import receptor subunit TOM22 homolo... [more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 2
Match NameE-valueIdentityDescription
mge3.507e-1035.79gene:FBgn0035473 transcript:FBtr0073175[more]
mge1.126e-935.79gene:FBgn0035473 transcript:FBtr0073176[more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2
Match NameE-valueIdentityDescription
tomm226.064e-640.98translocase of outer mitochondrial membrane 22 hom... [more]
tomm226.064e-640.98translocase of outer mitochondrial membrane 22 hom... [more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1
Match NameE-valueIdentityDescription
b3galt5.44.378e-635.16beta-1,3-galactosyltransferase 5 gene 4 [Source:Xe... [more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2H1BSF21.187e-941.46Translocase of outer mitochondrial membrane 22 OS=... [more]
A0A210Q3C01.845e-937.35Mitochondrial import receptor subunit TOM22-like O... [more]
V4CN232.761e-937.35Uncharacterized protein (Fragment) OS=Lottia gigan... [more]
A0A1B6JPM78.750e-943.37Uncharacterized protein OS=Homalodisca liturata OX... [more]
A0A0R3WFH51.168e-834.57Uncharacterized protein OS=Taenia asiatica OX=6051... [more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 1
Match NameE-valueIdentityDescription
tomm223.428e-637.70translocase of outer mitochondrial membrane 22 [So... [more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 1
Match NameE-valueIdentityDescription
tomm228.286e-740.98translocase of outer mitochondrial membrane 22 [So... [more]
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BLAST of mitochondrial import receptor subunit TOM22 homolog vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000027748.11.800e-66100.00SMESG000027748.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024389 ID=SMED30024389|Name=mitochondrial import receptor subunit TOM22 homolog|organism=Schmidtea mediterranea sexual|type=transcript|length=685bp
TTCAGGAGTATTTAATGGCGGTTTTGTTTATAAAAAAAAAAAAAATTTTT
GTTTAGTTTCACTGGCTTCTAAAGTTCATAATTTTACAGATTTTGTTTAT
ATTTAGTGTCATTTTTAAAATGTCTTTAAGTATCGAGGATGAAGAATTGT
TAGAAGATGAAAATTTATGGGAAAGGATTATAGGATTAACAGAAATGTTA
CCCGAATCTGTTAGGTCTTTAACATCTAAGTCTGCTTCTAGATCATGGAA
GATTATCAAGAAGTCTTACACATTATTTCGTAATGCAGGATGGATTTTAG
CATCCGTATTAGTTGTTGGTGCTGGTCCTGCGGTTTTTGAAAATTTACGA
GATAAAGCATTAGCTGAAGATGCTGATCAACAAAGGAAGCTCATGTTTGG
CCCACAATCAGAATCAGGATTTGCAATTCCACCAACAATTAGAGCAAATT
GAATATGTAGTTTTATAAATAATTAGGAAGTATTTTAGTGGTGAATTTCA
GGCTAATATGAAATTAGATATTGTAATTATTTCATTTAATATATTAAATT
GTGAAATATTTTTAAATAAGATATTTTATTAATGACGTTGCGCAATTTTT
TAAACACTTGATTTAACTATATGTATAAATTGATTGCTTTTTTGATATTG
TTCCCAAGGCTGTAAAAATTTCAAATTTAGTTTGC
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protein sequence of SMED30024389-orf-1

>SMED30024389-orf-1 ID=SMED30024389-orf-1|Name=SMED30024389-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=111bp
MSLSIEDEELLEDENLWERIIGLTEMLPESVRSLTSKSASRSWKIIKKSY
TLFRNAGWILASVLVVGAGPAVFENLRDKALAEDADQQRKLMFGPQSESG
FAIPPTIRAN*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000429neoblast
PLANA:0002109X1 cell
Vocabulary: INTERPRO
TermDefinition
IPR005683Tom22
Vocabulary: biological process
TermDefinition
GO:0006886intracellular protein transport
Vocabulary: cellular component
TermDefinition
GO:0005741mitochondrial outer membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005683Mitochondrial import receptor subunit Tom22PFAMPF04281Tom22coord: 6..68
e-value: 1.4E-7
score: 31.3
IPR005683Mitochondrial import receptor subunit Tom22PANTHERPTHR12504MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22coord: 7..100
NoneNo IPR availablePANTHERPTHR12504:SF0MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22 HOMOLOGcoord: 7..100
NoneNo IPR availableTMHMMTMhelixcoord: 51..73