Synaptobrevin like protein YKT6

Overview
NameSynaptobrevin like protein YKT6
Smed IDSMED30024276
Length (bp)1402
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of Synaptobrevin like protein YKT6 (SMED30024276) t-SNE clustered cells

Violin plots show distribution of expression levels for Synaptobrevin like protein YKT6 (SMED30024276) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Synaptobrevin like protein YKT6 (SMED30024276) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Synaptobrevin like protein YKT6 (SMED30024276) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024276

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 2

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
posterior sideSMED30024276h1SMcG0011697 dd_Smed_v4_8028_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
posterior muscle cellSMED30024276h1SMcG0011697 dd_Smed_v4_8028_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Human
Match: YKT6 (YKT6 v-SNARE homolog [Source:HGNC Symbol;Acc:HGNC:16959])

HSP 1 Score: 208.379 bits (529), Expect = 1.429e-64
Identity = 100/200 (50.00%), Postives = 150/200 (75.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K  +  K ++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQ+YLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +       +    + ++  +   L +YQNP+EADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGEA--KVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHYPALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Human
Match: YKT6 (YKT6 v-SNARE homolog [Source:HGNC Symbol;Acc:HGNC:16959])

HSP 1 Score: 145.976 bits (367), Expect = 3.716e-41
Identity = 72/155 (46.45%), Postives = 115/155 (74.19%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIIL 490
            MK++S+ +L+K  +  K ++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQ+YLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +       +    + ++  +   L +YQNP+EADP+ ++Q +LDETKIIL
Sbjct:    1 MKLYSLSVLYKGEA--KVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHYPALDGHLSRYQNPREADPMTKVQAELDETKIIL 153
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Celegans
Match: ykt-6 (YKT6 (Yeast v-SNARE) homolog [Source:UniProtKB/TrEMBL;Acc:Q9TXZ9])

HSP 1 Score: 197.208 bits (500), Expect = 1.395e-60
Identity = 93/198 (46.97%), Postives = 137/198 (69.19%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPP-QKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCC 616
            MK++SI +  K+       + +S  DL+ F +FQ+ SV+EF+ FT+KL+VER+    RSSVKE EYL H YVR D LS V  +D EY  RVA + L ++LD+F    P  Q   +  +   ++  + + L+K+QNP+EADP+ R+Q +++ETK+++HNT++ VL RGEK+DDLV++SE LS QSKMFY +A+K N+CC
Sbjct:    1 MKLYSILVFHKNVDTSDVKLFKSECDLSSFSFFQRGSVQEFMTFTAKLLVERSGLGARSSVKENEYLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPATQWPGIRSDKDCSYTGLKDLLEKWQNPREADPMTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQSKMFYTSARKMNKCC 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Celegans
Match: ykt-6 (YKT6 (Yeast v-SNARE) homolog [Source:UniProtKB/TrEMBL;Acc:Q9TXZ9])

HSP 1 Score: 197.208 bits (500), Expect = 1.395e-60
Identity = 93/198 (46.97%), Postives = 137/198 (69.19%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPP-QKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCC 616
            MK++SI +  K+       + +S  DL+ F +FQ+ SV+EF+ FT+KL+VER+    RSSVKE EYL H YVR D LS V  +D EY  RVA + L ++LD+F    P  Q   +  +   ++  + + L+K+QNP+EADP+ R+Q +++ETK+++HNT++ VL RGEK+DDLV++SE LS QSKMFY +A+K N+CC
Sbjct:    1 MKLYSILVFHKNVDTSDVKLFKSECDLSSFSFFQRGSVQEFMTFTAKLLVERSGLGARSSVKENEYLVHCYVRNDGLSAVCVTDAEYQQRVAMSFLGRVLDDFTTRVPATQWPGIRSDKDCSYTGLKDLLEKWQNPREADPMTRVQEEVEETKMVMHNTIQSVLDRGEKLDDLVKKSENLSDQSKMFYTSARKMNKCC 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Celegans
Match: vamp-8 (VAMP (Vesicle Associated Membrane Protein) homolog [Source:UniProtKB/TrEMBL;Acc:Q95QZ1])

HSP 1 Score: 46.9802 bits (110), Expect = 1.792e-6
Identity = 22/62 (35.48%), Postives = 41/62 (66.13%), Query Frame = 2 
Query:  425 NPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNR 610
            N ++ + +  L+N +D  K ++ + +E++L RGE++D++ +RSE L+A S  F  TA+K  R
Sbjct:   11 NDQQKEKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQR 72
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Celegans
Match: vamp-8 (VAMP (Vesicle Associated Membrane Protein) homolog [Source:UniProtKB/TrEMBL;Acc:Q95QZ1])

HSP 1 Score: 46.9802 bits (110), Expect = 1.949e-6
Identity = 22/62 (35.48%), Postives = 41/62 (66.13%), Query Frame = 2 
Query:  425 NPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNR 610
            N ++ + +  L+N +D  K ++ + +E++L RGE++D++ +RSE L+A S  F  TA+K  R
Sbjct:   14 NDQQKEKMQNLRNQVDSVKAVMVDNVERILERGERLDNIERRSEQLNATSANFKFTARKVQR 75
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Fly
Match: Ykt6 (gene:FBgn0260858 transcript:FBtr0071093)

HSP 1 Score: 220.32 bits (560), Expect = 1.785e-69
Identity = 102/198 (51.52%), Postives = 141/198 (71.21%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCT 619
            +K+F++ I  K  S  +  +L++  DL  F +FQ+ +V EF+ F SK +VERT+   R SVK+  Y+CH+YVR D L+GVL +D EYP+RVA T+++K+LD+F A+    +     E + +F  +  FL +YQNP EADPL ++QNDLDETKIIL NT+E VL RGEK+DD+V +SE LS QSK FY+TAKKTN CC+
Sbjct:    2 VKLFALSIFHKGASEAR--LLKTASDLQSFSFFQRGTVNEFMTFASKTIVERTQPALRQSVKQDAYMCHVYVRADNLAGVLIADHEYPHRVAHTLITKILDDFTAKVSADQWPNGTEATISFDLLPAFLARYQNPVEADPLTKMQNDLDETKIILKNTIEAVLERGEKLDDMVSKSEKLSLQSKAFYKTAKKTNSCCS 197
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Zebrafish
Match: ykt6 (YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI gene;Acc:394067])

HSP 1 Score: 196.823 bits (499), Expect = 2.589e-60
Identity = 100/200 (50.00%), Postives = 142/200 (71.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L K  +  K  +L++ +DL+ F +FQ++SV+EF+ FTS L+VER+    R+SVKEQEYLCH+YVR D L GV+ +D EYP+RV  T+L K+LDEF+ +            +  +  +   L +YQNP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLVQ+SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLHKGST--KANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSALGSRASVKEQEYLCHVYVRNDNLGGVVIADSEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQYTALDSHLARYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQSKAFYKTARKQNSCCEIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Zebrafish
Match: ykt6 (YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI gene;Acc:394067])

HSP 1 Score: 196.823 bits (499), Expect = 2.589e-60
Identity = 100/200 (50.00%), Postives = 142/200 (71.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L K  +  K  +L++ +DL+ F +FQ++SV+EF+ FTS L+VER+    R+SVKEQEYLCH+YVR D L GV+ +D EYP+RV  T+L K+LDEF+ +            +  +  +   L +YQNP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLVQ+SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLHKGST--KANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSALGSRASVKEQEYLCHVYVRNDNLGGVVIADSEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQYTALDSHLARYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQSKAFYKTARKQNSCCEIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Zebrafish
Match: ykt6 (YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI gene;Acc:394067])

HSP 1 Score: 192.2 bits (487), Expect = 1.696e-58
Identity = 100/201 (49.75%), Postives = 142/201 (70.65%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKY-QNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L K  +  K  +L++ +DL+ F +FQ++SV+EF+ FTS L+VER+    R+SVKEQEYLCH+YVR D L GV+ +D EYP+RV  T+L K+LDEF+ +            +  +  +   L +Y QNP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLVQ+SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLHKGST--KANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSALGSRASVKEQEYLCHVYVRNDNLGGVVIADSEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQYTALDSHLARYQQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQSKAFYKTARKQNSCCEIM 199
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Zebrafish
Match: vamp8 (vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215])

HSP 1 Score: 51.9878 bits (123), Expect = 6.429e-8
Identity = 24/63 (38.10%), Postives = 44/63 (69.84%), Query Frame = 2 
Query:  422 QNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNR 610
            ++ ++AD +  LQ+ +D  K I+   ++++LARGE++DDL+ +SE L A ++ F QT++K  R
Sbjct:   15 ESSQDADRVKALQSQVDGVKDIMTQNVDRILARGERLDDLMGKSEDLEAGAQNFKQTSQKVAR 77
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Zebrafish
Match: vamp8 (vesicle-associated membrane protein 8 (endobrevin) [Source:ZFIN;Acc:ZDB-GENE-030131-5215])

HSP 1 Score: 51.9878 bits (123), Expect = 6.429e-8
Identity = 24/63 (38.10%), Postives = 44/63 (69.84%), Query Frame = 2 
Query:  422 QNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNR 610
            ++ ++AD +  LQ+ +D  K I+   ++++LARGE++DDL+ +SE L A ++ F QT++K  R
Sbjct:   15 ESSQDADRVKALQSQVDGVKDIMTQNVDRILARGERLDDLMGKSEDLEAGAQNFKQTSQKVAR 77
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Xenopus
Match: sec14l5 (SEC14-like lipid binding 5 [Source:Xenbase;Acc:XB-GENE-953433])

HSP 1 Score: 203.371 bits (516), Expect = 1.162e-62
Identity = 100/200 (50.00%), Postives = 147/200 (73.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K  +  K  +L+S +D++ F +FQ++S++EF+ FTS+L+VER++K  RSSVKEQEYLCH+YVR D L+GV+ +D EYP RV  T+L K+L+EF+ +            +  +  +  +L KYQNP++ADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGDN--KVSLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVKEQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCGIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Xenopus
Match: sec14l5 (SEC14-like lipid binding 5 [Source:Xenbase;Acc:XB-GENE-953433])

HSP 1 Score: 189.119 bits (479), Expect = 3.904e-57
Identity = 94/189 (49.74%), Postives = 139/189 (73.54%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQT 592
            MK++S+ +L+K  +  K  +L+S +D++ F +FQ++S++EF+ FTS+L+VER++K  RSSVKEQEYLCH+YVR D L+GV+ +D EYP RV  T+L K+L+EF+ +            +  +  +  +L KYQNP++ADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+T
Sbjct:    1 MKLYSLSVLYKGDN--KVSLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVKEQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKT 187
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Mouse
Match: Ykt6 (YKT6 v-SNARE homolog (S. cerevisiae) [Source:MGI Symbol;Acc:MGI:1927550])

HSP 1 Score: 209.92 bits (533), Expect = 2.360e-65
Identity = 102/200 (51.00%), Postives = 149/200 (74.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K     K ++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQEYLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +       +    +  +  + + L KYQNP+EADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGDP--KAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSGKGSRASVKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQYTGLDDHLSKYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. UniProt/SwissProt
Match: sp|Q3T000|YKT6_BOVIN (Synaptobrevin homolog YKT6 OS=Bos taurus OX=9913 GN=YKT6 PE=2 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 3.527e-65
Identity = 103/200 (51.50%), Postives = 150/200 (75.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K  S  KT++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQEYLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +           ++  +  +   L +YQNP+EADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGES--KTVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVKEQEYLCHVYVRNDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPTGSPDTIRYSGLDSQLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGIQSKAFYKTARKQNSCCAIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. UniProt/SwissProt
Match: sp|Q9CQW1|YKT6_MOUSE (Synaptobrevin homolog YKT6 OS=Mus musculus OX=10090 GN=Ykt6 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 1.651e-64
Identity = 102/200 (51.00%), Postives = 149/200 (74.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K     K ++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQEYLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +       +    +  +  + + L KYQNP+EADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGDP--KAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSGKGSRASVKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIQYTGLDDHLSKYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. UniProt/SwissProt
Match: sp|O15498|YKT6_HUMAN (Synaptobrevin homolog YKT6 OS=Homo sapiens OX=9606 GN=YKT6 PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 6.864e-64
Identity = 100/200 (50.00%), Postives = 150/200 (75.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K  +  K ++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQ+YLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +       +    + ++  +   L +YQNP+EADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGEA--KVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVKEQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHYPALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. UniProt/SwissProt
Match: sp|Q5EGY4|YKT6_RAT (Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX=10116 GN=Ykt6 PE=1 SV=1)

HSP 1 Score: 207.608 bits (527), Expect = 1.453e-63
Identity = 100/200 (50.00%), Postives = 148/200 (74.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ + +K     K ++L++ +D++ F +FQ++SV+EF+ FTS+L+VER+ K  R+SVKEQEYLCH+YVR D L+GV+ +D EYP+RVA T+L K+LDEF+ +       +    + ++  +   L +YQNP+EADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVFYKGEP--KAVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSAKGSRASVKEQEYLCHVYVRSDSLAGVVIADSEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHYTALDGHLSRYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCAIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. UniProt/SwissProt
Match: sp|Q6P816|YKT6_XENTR (Synaptobrevin homolog YKT6 OS=Xenopus tropicalis OX=8364 GN=ykt6 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 6.154e-62
Identity = 100/200 (50.00%), Postives = 147/200 (73.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K  +  K  +L+S +D++ F +FQ++S++EF+ FTS+L+VER++K  RSSVKEQEYLCH+YVR D L+GV+ +D EYP RV  T+L K+L+EF+ +            +  +  +  +L KYQNP++ADP+ ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGDN--KVSLLKSAYDVSSFSFFQRSSIQEFMAFTSQLIVERSDKGSRSSVKEQEYLCHVYVRNDSLAGVVIADNEYPPRVCFTLLEKVLEEFSTQVDRIDWPSGSPATIQYNALDSYLSKYQNPRDADPMSKVQAELDETKIILHNTMESLLQRGEKLDDLVSKSEVLGTQSKAFYKTARKQNSCCGIM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. TrEMBL
Match: A0A4S2L610 (Uncharacterized protein OS=Opisthorchis felineus OX=147828 GN=CRM22_009724 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 6.438e-84
Identity = 127/200 (63.50%), Postives = 159/200 (79.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK+FS+QILFK     K  +LQ+ H+L+ F YF ++SVKEF+ FT KLV E+TE+CQR  VKEQEY+CH++VR D L GVL +D+EYP RVAQT+L+K  ++FAAE+P     +M E SA  K++ E+LQ+YQNP EAD LMRL N+LDETK+ILHNTLE +LARGEK+DDLVQRSE LS QSKMFY TAKKTN+CC +L
Sbjct:    1 MKLFSLQILFKTGDQCK--LLQASHELSTFRYFHRSSVKEFMVFTGKLVGEKTERCQRGLVKEQEYICHVFVRHDNLCGVLIADQEYPQRVAQTLLTKATEDFAAEYPSNTWAMMAEESAGCKKIDEYLQRYQNPVEADGLMRLHNELDETKVILHNTLESLLARGEKLDDLVQRSEDLSVQSKMFYTTAKKTNKCCILL 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. TrEMBL
Match: A0A075AHZ8 (Uncharacterized protein OS=Opisthorchis viverrini OX=6198 GN=T265_02903 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 6.438e-84
Identity = 127/200 (63.50%), Postives = 159/200 (79.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK+FS+QILFK     K  +LQ+ H+L+ F YF ++SVKEF+ FT KLV E+TE+CQR  VKEQEY+CH++VR D L GVL +D+EYP RVAQT+L+K  ++FAAE+P     +M E SA  K++ E+LQ+YQNP EAD LMRL N+LDETK+ILHNTLE +LARGEK+DDLVQRSE LS QSKMFY TAKKTN+CC +L
Sbjct:    1 MKLFSLQILFKTGDQCK--LLQASHELSTFRYFHRSSVKEFMVFTGKLVGEKTERCQRGLVKEQEYICHVFVRHDNLCGVLIADQEYPQRVAQTLLTKATEDFAAEYPSNTWAMMAEESAGCKKIDEYLQRYQNPVEADGLMRLHNELDETKVILHNTLESLLARGEKLDDLVQRSEDLSVQSKMFYTTAKKTNKCCILL 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. TrEMBL
Match: A0A504YNK8 (Synaptobrevin like protein YKT6 OS=Fasciola gigantica OX=46835 GN=FGIG_02100 PE=3 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 6.651e-84
Identity = 126/200 (63.00%), Postives = 160/200 (80.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK+FS+QI+ K     K  +LQ+ H+LT F YF ++SVKEF+ FT+KLV ++T++CQR  VKEQEY+CH+YVR D L GVL SDEEYP RVAQT+L+K  ++FAA++P      M+E SA  K++ E+LQ+YQNP EAD +MRL  +LDETK+ILHNTLE +L+RGEK+DDLVQRSEGLS QSKMFY TAKKTNRCCT+L
Sbjct:    1 MKLFSLQIILKAPEQPK--VLQASHELTTFRYFHRSSVKEFMVFTAKLVCQKTDRCQRGLVKEQEYICHVYVRHDNLCGVLISDEEYPQRVAQTLLTKATEDFAAQYPSTTWESMQEESAACKKIDEYLQRYQNPAEADGIMRLHTELDETKVILHNTLESLLSRGEKLDDLVQRSEGLSHQSKMFYTTAKKTNRCCTLL 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. TrEMBL
Match: T1FMS0 (Uncharacterized protein OS=Helobdella robusta OX=6412 GN=20210119 PE=3 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 4.013e-83
Identity = 122/200 (61.00%), Postives = 162/200 (81.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK+F+I IL+K  + GK   L    +L+ FG+FQ++S +EF++FTSK++VERT   QRSSVKEQEY+CH+YVRGD L+GV+ SD+EYP+RV+ T+L+K+LD+F+A++P  +    +ENS  F  +AEFLQKYQNPKEAD + R+Q+DLDETKIILHNT+E VL RGEK+DDLV +SEGL+ QSK FY+TAKKTN CC +L
Sbjct:    1 MKLFAINILYKG-TNGKVKKLTGSSELSSFGFFQRSSAQEFMDFTSKIIVERTNTSQRSSVKEQEYVCHLYVRGDSLAGVVISDDEYPSRVSFTLLNKVLDDFSAKYPAHQWPDAQENSLPFTELAEFLQKYQNPKEADAMTRIQSDLDETKIILHNTIESVLERGEKLDDLVAKSEGLTYQSKAFYKTAKKTNSCCVLL 199
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. TrEMBL
Match: A0A4E0R377 (Synaptobrevin YKT6-B OS=Fasciola hepatica OX=6192 GN=D915_007742 PE=3 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.749e-82
Identity = 123/200 (61.50%), Postives = 160/200 (80.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK+FS+QI+ K     K  +LQ+ H+L+ F +F ++SVKEF+ FT+KLV ++T++CQR  VKEQEY+CH+YVR D L GVL +DEEYP RVAQT+L+K  ++FAA++P      M+E SA  K++ E+LQ+YQNP EAD +MRL  +LDETK+ILHNTLE +L+RGEK+DDLVQRSEGLS QSKMFY TAKKTNRCCT+L
Sbjct:    1 MKLFSLQIILKAPEQPK--VLQASHELSAFRFFHRSSVKEFMVFTAKLVCQKTDRCQRGLVKEQEYICHVYVRHDNLCGVLITDEEYPQRVAQTLLTKATEDFAAQYPSTTWESMQEESAACKKIDEYLQRYQNPAEADGIMRLHTELDETKVILHNTLESLLSRGEKLDDLVQRSEGLSHQSKMFYTTAKKTNRCCTLL 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Cavefish
Match: ENSAMXT00000031682.1 (synaptobrevin homolog YKT6-like [Source:NCBI gene;Acc:103039216])

HSP 1 Score: 199.904 bits (507), Expect = 1.999e-61
Identity = 93/200 (46.50%), Postives = 142/200 (71.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK+  + +L+K  +  K+ +L++ ++L+ FG+FQ++S++EF+ FT  L+VER+    R+SV E+EY+CH+++R D L+ V  +D EYP RV  ++L K+LDEF+ +   ++       +  F  + E+L KYQNP+EAD L R+Q ++DETKIILH T+E +L RGEK+DDLVQ+SE L   SK FY+TAKK NRCC ++
Sbjct:   14 MKLLCLSVLYKGEA--KSNLLKAAYELSSFGFFQRSSIQEFMTFTCGLLVERSAFGSRASVSEREYMCHVHIRDDGLAAVAIADTEYPQRVCFSLLEKVLDEFSRQVDDRQWPTGTPETIRFTMLEEYLNKYQNPREADALTRVQAEVDETKIILHKTMESLLERGEKLDDLVQKSEELGQTSKAFYKTAKKQNRCCKMM 211
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Cavefish
Match: ykt6 (YKT6 v-SNARE homolog [Source:NCBI gene;Acc:103038363])

HSP 1 Score: 197.978 bits (502), Expect = 8.214e-61
Identity = 99/200 (49.50%), Postives = 143/200 (71.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L K  +  K  +L++ +DL+ F +FQ++SV+EF+ FTS L+VER+    R+SVKEQEYLCH+Y+R D L GV+ +D EYP+RV  T+L K+LDEF+ +            +  +  +  +L KYQNP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLVQ+SE L  QSK FY+TA+K N CC ++
Sbjct:    1 MKLYSLSVLHKGST--KANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSSLGSRASVKEQEYLCHVYIRNDNLGGVVIADNEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQYTALESYLAKYQNPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQSKAFYKTARKQNSCCEVM 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Cavefish
Match: ykt6 (YKT6 v-SNARE homolog [Source:NCBI gene;Acc:103038363])

HSP 1 Score: 169.474 bits (428), Expect = 2.495e-50
Identity = 91/200 (45.50%), Postives = 128/200 (64.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L K  +  K  +L++ +DL+ F +FQ++SV+EF+ FTS L+VER+    R+SVKEQEYLCH+Y+R D L GV+ +D EYP+RV  T+L K                                   NP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLVQ+SE L  QSK FY+TA+K N CC ++
Sbjct:    1 MKLYSLSVLHKGST--KANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSSLGSRASVKEQEYLCHVYIRNDNLGGVVIADNEYPSRVCFTLLDK-----------------------------------NPREADAMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQSKAFYKTARKQNSCCEVM 163
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Cavefish
Match: ykt6 (YKT6 v-SNARE homolog [Source:NCBI gene;Acc:103038363])

HSP 1 Score: 136.346 bits (342), Expect = 3.077e-37
Identity = 71/155 (45.81%), Postives = 107/155 (69.03%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIIL 490
            MK++S+ +L K  +  K  +L++ +DL+ F +FQ++SV+EF+ FTS L+VER+    R+SVKEQEYLCH+Y+R D L GV+ +D EYP+RV  T+L K+LDEF+ +            +  +  +  +L KYQNP+EAD + ++Q +LDETKIIL
Sbjct:    1 MKLYSLSVLHKGST--KANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSSLGSRASVKEQEYLCHVYIRNDNLGGVVIADNEYPSRVCFTLLDKVLDEFSRQVNSIDWPSGSPATIQYTALESYLAKYQNPREADAMSKVQAELDETKIIL 153
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Cavefish
Match: vamp8 (vesicle-associated membrane protein 8 [Source:NCBI gene;Acc:103036711])

HSP 1 Score: 53.5286 bits (127), Expect = 1.753e-8
Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 2 
Query:  434 EADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNR 610
            E D +  LQ+ +D  K I+   ++++LARGE++DDL+ +SEGL   +K F QT++K  R
Sbjct:   22 EVDRVKALQSQVDGVKDIMTQNVDRILARGERLDDLMDKSEGLEDGAKTFKQTSQKVAR 80
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Sea Lamprey
Match: ykt6 (YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI gene;Acc:394067])

HSP 1 Score: 213.001 bits (541), Expect = 3.234e-67
Identity = 96/200 (48.00%), Postives = 149/200 (74.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++ + +L+K  +  K  +L++ +D++ FG+FQ++SV+EFL FTS+++VERT +C R+SVKEQ+Y CH++VR D L+GV+ +D EYP+RV  ++L K+L+EF+ +            S  F+ +  +L KYQNPKEAD + ++Q +LDETK+ILH+T+E +L RGEK+DDLV +S+ LS QSK FY+TA+K N CC+++
Sbjct:    1 MKLYCLSVLYKGEN--KANLLKAAYDVSSFGFFQRSSVQEFLAFTSQIIVERTNRCSRASVKEQDYFCHVHVREDGLAGVVVADHEYPSRVCFSLLGKVLEEFSMQVKSTDWPGGSPASTIFEGLDAYLAKYQNPKEADAMTKVQAELDETKVILHHTMESLLQRGEKLDDLVSKSDHLSLQSKTFYKTARKQNSCCSVI 198
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Yeast
Match: YKT6 (Vesicle membrane protein (v-SNARE) with acyltransferase activity; involved in trafficking to and within the Golgi, endocytic trafficking to the vacuole, and vacuolar fusion; membrane localization due to prenylation at the carboxy-terminus; human homolog YKT6 can complement yeast ykt6 mutant [Source:SGD;Acc:S000001679])

HSP 1 Score: 186.808 bits (473), Expect = 2.582e-57
Identity = 91/203 (44.83%), Postives = 138/203 (67.98%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCG-KTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCL-LMEENSA-NFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            M+I+ I +     S G K + L    DL+QFG+F+++SV +F+ F ++ V  RT   QR S++E  Y+ H+Y R + + GVL +D+EYP R A T+L+K+LDE+    P ++   + E N A   K++  ++ KYQ+P +AD +M++Q +LDETKI+LH T+E VL RGEK+D+LV +SE L+A SKMFY+ AKK+N CC I+
Sbjct:    1 MRIYYIGVF---RSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGQRQSIEEGNYIGHVYARSEGICGVLITDKEYPVRPAYTLLNKILDEYLVAHPKEEWADVTETNDALKMKQLDTYISKYQDPSQADAIMKVQQELDETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQAKKSNSCCIIM 200
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Nematostella
Match: EDO31089 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYX4])

HSP 1 Score: 228.409 bits (581), Expect = 5.060e-73
Identity = 110/199 (55.28%), Postives = 146/199 (73.37%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTI 622
            MK++ + I +KD    K   L S  DL  FGYFQ++SVKEF++FTS+++VERT   +R+SVKEQEY+CH++VR D L   + SD EYP RVA T+L+K+LD+F+A+  P +      N+  F    E LQKYQNP+EAD + ++Q +LDETKI+LH T+E VL RGEK+DDLV++SEGLS QSK FY+TAKKTN CC I
Sbjct:    1 MKLYYLGIYYKD---VKVKALVSAADLQSFGYFQRSSVKEFMQFTSQILVERTRPNERASVKEQEYMCHVFVRADSLGACVISDHEYPQRVAFTLLNKILDDFSAQISPAQYKSAAANTIVFPACEENLQKYQNPREADAMTKVQAELDETKIVLHGTIEAVLQRGEKLDDLVEKSEGLSMQSKAFYKTAKKTNSCCCI 196
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Nematostella
Match: EDO39013 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SBE8])

HSP 1 Score: 46.595 bits (109), Expect = 7.164e-6
Identity = 46/192 (23.96%), Postives = 89/192 (46.35%), Query Frame = 2 
Query:   47 ILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFP--PQKCLLMEENSANFKRV--AEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNR 610
            IL+   S G T+       L +F     N    F E T +++        + +  +  YL H Y+  D++  +  +D+ +    A   L+++   F A +    Q  L    NS  F RV  AE      + +E   + ++Q +LDE + I+   ++ + +RGE+++ L+ ++E L++ S  F +T++   R
Sbjct:    3 ILYSVVSRGTTV-------LAKFAACAGN----FAEVTEQILSRIPPDNSKLTYTQGSYLFH-YISEDRIIYLCITDDAFERSQAFLYLTEIKRRFQAAYHGRAQTALPFAMNS-EFSRVLSAEMKHYSDSREEGSSIAKVQVELDEIRGIMVKNIDSIASRGERLELLIDKAEDLNSSSLTFKKTSRGLAR 181
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Medaka
Match: ykt6 (YKT6 v-SNARE homolog [Source:NCBI gene;Acc:101168625])

HSP 1 Score: 198.749 bits (504), Expect = 3.990e-61
Identity = 102/200 (51.00%), Postives = 141/200 (70.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K     K+ +L++  DL+ F +FQ++SV+EF+ FTS L+VERT +  R+SVKEQEYLCH+YVR D L  V+ +D EYP RV  T+L K+LDEF+ +              N+K +   L KYQNP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYK--GATKSNLLKAAFDLSSFSFFQRSSVQEFMTFTSALIVERTSQGTRASVKEQEYLCHVYVRNDSLGAVVIADTEYPQRVCFTLLDKVLDEFSRQVDSIDWPTGSPEKINYKALDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVAKSEHLGNQSKAFYKTARKQNSCCEIM 198
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Medaka
Match: ykt6 (YKT6 v-SNARE homolog [Source:NCBI gene;Acc:101168625])

HSP 1 Score: 168.703 bits (426), Expect = 4.781e-50
Identity = 92/200 (46.00%), Postives = 127/200 (63.50%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MK++S+ +L+K  +  K+ +L++  DL+ F +FQ++SV+EF+ FTS L+VERT +  R+SVKEQEYLCH+YVR D L  V+ +D EYP RV  T+L K                                   NP+EAD + ++Q +LDETKIILHNT+E +L RGEK+DDLV +SE L  QSK FY+TA+K N CC I+
Sbjct:    1 MKLYSLSVLYKGAT--KSNLLKAAFDLSSFSFFQRSSVQEFMTFTSALIVERTSQGTRASVKEQEYLCHVYVRNDSLGAVVIADTEYPQRVCFTLLDK-----------------------------------NPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVAKSEHLGNQSKAFYKTARKQNSCCEIM 163
[Close]
BLAST of Synaptobrevin like protein YKT6 vs. Planmine SMEST
Match: SMESG000070695.1 (SMESG000070695.1)

HSP 1 Score: 412.92 bits (1060), Expect = 4.404e-145
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 2 
Query:   26 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 625
            MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL
Sbjct:    1 MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVVERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLLDEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDETKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL 200
The following BLAST results are available for this feature:
BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 2
Match NameE-valueIdentityDescription
YKT61.429e-6450.00YKT6 v-SNARE homolog [Source:HGNC Symbol;Acc:HGNC:... [more]
YKT63.716e-4146.45YKT6 v-SNARE homolog [Source:HGNC Symbol;Acc:HGNC:... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4
Match NameE-valueIdentityDescription
ykt-61.395e-6046.97YKT6 (Yeast v-SNARE) homolog [Source:UniProtKB/Tr... [more]
ykt-61.395e-6046.97YKT6 (Yeast v-SNARE) homolog [Source:UniProtKB/Tr... [more]
vamp-81.792e-635.48VAMP (Vesicle Associated Membrane Protein) homolog... [more]
vamp-81.949e-635.48VAMP (Vesicle Associated Membrane Protein) homolog... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Ykt61.785e-6951.52gene:FBgn0260858 transcript:FBtr0071093[more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ykt62.589e-6050.00YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI ... [more]
ykt62.589e-6050.00YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI ... [more]
ykt61.696e-5849.75YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI ... [more]
vamp86.429e-838.10vesicle-associated membrane protein 8 (endobrevin)... [more]
vamp86.429e-838.10vesicle-associated membrane protein 8 (endobrevin)... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 2
Match NameE-valueIdentityDescription
sec14l51.162e-6250.00SEC14-like lipid binding 5 [Source:Xenbase;Acc:XB-... [more]
sec14l53.904e-5749.74SEC14-like lipid binding 5 [Source:Xenbase;Acc:XB-... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 1
Match NameE-valueIdentityDescription
Ykt62.360e-6551.00YKT6 v-SNARE homolog (S. cerevisiae) [Source:MGI S... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5
Match NameE-valueIdentityDescription
sp|Q3T000|YKT6_BOVIN3.527e-6551.50Synaptobrevin homolog YKT6 OS=Bos taurus OX=9913 G... [more]
sp|Q9CQW1|YKT6_MOUSE1.651e-6451.00Synaptobrevin homolog YKT6 OS=Mus musculus OX=1009... [more]
sp|O15498|YKT6_HUMAN6.864e-6450.00Synaptobrevin homolog YKT6 OS=Homo sapiens OX=9606... [more]
sp|Q5EGY4|YKT6_RAT1.453e-6350.00Synaptobrevin homolog YKT6 OS=Rattus norvegicus OX... [more]
sp|Q6P816|YKT6_XENTR6.154e-6250.00Synaptobrevin homolog YKT6 OS=Xenopus tropicalis O... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4S2L6106.438e-8463.50Uncharacterized protein OS=Opisthorchis felineus O... [more]
A0A075AHZ86.438e-8463.50Uncharacterized protein OS=Opisthorchis viverrini ... [more]
A0A504YNK86.651e-8463.00Synaptobrevin like protein YKT6 OS=Fasciola gigant... [more]
T1FMS04.013e-8361.00Uncharacterized protein OS=Helobdella robusta OX=6... [more]
A0A4E0R3772.749e-8261.50Synaptobrevin YKT6-B OS=Fasciola hepatica OX=6192 ... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5
Match NameE-valueIdentityDescription
ENSAMXT00000031682.11.999e-6146.50synaptobrevin homolog YKT6-like [Source:NCBI gene;... [more]
ykt68.214e-6149.50YKT6 v-SNARE homolog [Source:NCBI gene;Acc:1030383... [more]
ykt62.495e-5045.50YKT6 v-SNARE homolog [Source:NCBI gene;Acc:1030383... [more]
ykt63.077e-3745.81YKT6 v-SNARE homolog [Source:NCBI gene;Acc:1030383... [more]
vamp81.753e-842.37vesicle-associated membrane protein 8 [Source:NCBI... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 1
Match NameE-valueIdentityDescription
ykt63.234e-6748.00YKT6 v-SNARE homolog (S. cerevisiae) [Source:NCBI ... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1
Match NameE-valueIdentityDescription
YKT62.582e-5744.83Vesicle membrane protein (v-SNARE) with acyltransf... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2
Match NameE-valueIdentityDescription
EDO310895.060e-7355.28Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
EDO390137.164e-623.96Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 2
Match NameE-valueIdentityDescription
ykt63.990e-6151.00YKT6 v-SNARE homolog [Source:NCBI gene;Acc:1011686... [more]
ykt64.781e-5046.00YKT6 v-SNARE homolog [Source:NCBI gene;Acc:1011686... [more]
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BLAST of Synaptobrevin like protein YKT6 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 1
Match NameE-valueIdentityDescription
SMESG000070695.14.404e-145100.00SMESG000070695.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024276 ID=SMED30024276|Name=Synaptobrevin like protein YKT6|organism=Schmidtea mediterranea sexual|type=transcript|length=1402bp
CTATATAAATCTTATATGATAACAAATGAAAATATTTTCTATTCAAATTC
TTTTTAAAGACCATTCATGTGGAAAGACTATTATATTACAATCTTGTCAC
GATTTAACACAATTTGGATATTTCCAAAAAAATAGTGTCAAAGAATTTTT
AGAGTTTACATCAAAATTAGTTGTGGAACGTACTGAAAAATGTCAAAGAT
CTTCTGTTAAAGAACAAGAATATTTGTGCCATATATATGTAAGAGGTGAT
CAATTATCAGGTGTTTTGTTTTCGGATGAAGAGTATCCTAATAGAGTAGC
ACAAACAATTTTATCTAAATTATTAGATGAATTTGCTGCTGAATTTCCAC
CGCAAAAATGTTTATTAATGGAAGAGAATTCAGCAAATTTTAAACGAGTT
GCTGAATTTCTTCAAAAGTATCAGAACCCCAAAGAAGCAGATCCATTGAT
GCGACTTCAAAATGATTTAGATGAAACCAAAATAATTTTGCACAATACCC
TAGAACAAGTCTTAGCAAGAGGTGAAAAAATTGATGATCTTGTACAAAGA
TCGGAAGGCCTGAGTGCTCAGTCAAAAATGTTTTATCAAACAGCGAAGAA
AACCAATCGGTGTTGCACTATTCTGTGAGTAAATTTCAGTTGAAGAAAAC
ACTAAAGGAAATTTTTGGTGATTGAAACCAAATCGATTTTATAATTAGTT
ATTGATAAAGTCACACTTATTATTAATATTTTATTGACACGTGTACCTTG
TTGTCGTTGGTCTGTTTTTCGTTACTCCGGCAGCGTAATCCTTGTCCAAA
TGTGTTTATTAATGTTTGTTTGTGTATGTGCTATTTTGTATACATGATTA
TTTCTATTTTTTCTCAATCAATATAAAATTGATACTTTTGCTTTATTATA
TTGCCCATTGATAAAAAAAAGTTAAGAATTAATTTTATTTGACGACTTAA
ATTAAATAAAAAATTTTGAGATATTTTTACATTGAAAATTTGAGAAAGAT
TTTTCATTGACTAAATTATTGCTGGGCCGATATTGTTTTATTGCTGTTAT
TGTTTTGTTTTTGAATTAATCAATTTGAGGCTTTTTGATGAAGTGTTGTA
TTGGACTTGTGTTGAAAAGGAAATTTTGAAAAATTTCATAAACGGTGAAA
TTTTTGTATATTATTTTTGAGTTATTTTTTTAAAAAAAATATTTTTTATT
GATTGTAGGATTTTTGTTTTATCAATTTAGATATTTGTGCAGATTGATTG
ATTTATGGACTTTAGAACGACGTGGAATTTACAATTTGAACTTAAATAAT
GGGATCAGTGAAAATGTTCAATGTTTTGATTTTTCATGTCTCTGTGATTA
AAAATTACTAAATTTTGTGTATATTTTTCTTCGAAAAAACTTTTGATTTT
AG
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protein sequence of SMED30024276-orf-1

>SMED30024276-orf-1 ID=SMED30024276-orf-1|Name=SMED30024276-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=201bp
MKIFSIQILFKDHSCGKTIILQSCHDLTQFGYFQKNSVKEFLEFTSKLVV
ERTEKCQRSSVKEQEYLCHIYVRGDQLSGVLFSDEEYPNRVAQTILSKLL
DEFAAEFPPQKCLLMEENSANFKRVAEFLQKYQNPKEADPLMRLQNDLDE
TKIILHNTLEQVLARGEKIDDLVQRSEGLSAQSKMFYQTAKKTNRCCTIL
*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000101muscle cell
PLANA:0000142posterior region of the whole animal
PLANA:0002056medial muscle cell
PLANA:0003001lateral region of the whole animal
Vocabulary: INTERPRO
TermDefinition
IPR042855V_SNARE_CC
IPR010908Longin_dom
IPR001388Synaptobrevin
IPR011012Longin-like_dom_sf
Vocabulary: biological process
TermDefinition
GO:0016192vesicle-mediated transport
GO:0006810transport
Vocabulary: cellular component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..161
NoneNo IPR availableGENE3DG3DSA:3.30.450.50coord: 1..139
e-value: 2.5E-47
score: 162.2
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 143..200
e-value: 1.5E-30
score: 106.7
NoneNo IPR availablePANTHERPTHR45806:SF1SYNAPTOBREVIN HOMOLOG YKT6coord: 1..200
NoneNo IPR availablePANTHERPTHR45806FAMILY NOT NAMEDcoord: 1..200
NoneNo IPR availableCDDcd15867R-SNARE_YKT6coord: 138..198
e-value: 2.73446E-33
score: 111.692
NoneNo IPR availableCDDcd14824Longincoord: 15..132
e-value: 1.79328E-24
score: 91.1633
NoneNo IPR availableSUPERFAMILYSSF58038SNARE fusion complexcoord: 134..198
IPR010908Longin domainSMARTSM01270Longin_2coord: 45..125
e-value: 1.3E-15
score: 67.9
IPR010908Longin domainPFAMPF13774Longincoord: 47..111
e-value: 4.7E-10
score: 39.4
IPR010908Longin domainPROSITEPS50859LONGINcoord: 8..107
score: 19.404
IPR001388SynaptobrevinPFAMPF00957Synaptobrevincoord: 138..195
e-value: 1.2E-12
score: 47.4
IPR042855v-SNARE, coiled-coil homology domainPROSITEPS50892V_SNAREcoord: 140..200
score: 14.646
IPR011012Longin-like domain superfamilySUPERFAMILYSSF64356SNARE-likecoord: 1..139