SMED30024217
Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024217 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 9
Homology
BLAST of SMED30024217 vs. Ensembl Celegans
Match: ppk-1 (PIP Kinase [Source:UniProtKB/TrEMBL;Acc:O01759]) HSP 1 Score: 52.7582 bits (125), Expect = 4.281e-7 Identity = 43/199 (21.61%), Postives = 86/199 (43.22%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST---------KSSSYNGLNDFKY--NHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPK----MYKSSDAENHNVYR 670 + + +Q ++ + ++ E + L YY + +PKF G++ Y+ + GKN++ L+ P +H++ YD+K ST ++ + L D + NH DG ++ + +++ D + +++ YSL + +HN L +E + NR + P + AENH V + Sbjct: 185 IFYVSQDDQFIIKTVQHKEADFLQKLLPGYYMNLNQNPRTLLPKFFGLFCYQ-SLGKNIR---LLVMNNLLPQTVTMHEK----YDMKGSTYKRMANKAERAKPHPTLKDLDFLENHKDGIFIDPTALEALMKSISRDCLVMESFKIMDYSLLVGIHNVELGIKE---RAEQNRESHPAPSTSSDTFSGEKAENHKVLQ 372
BLAST of SMED30024217 vs. Ensembl Fly
Match: PIP5K59B (gene:FBgn0034789 transcript:FBtr0290095) HSP 1 Score: 60.077 bits (144), Expect = 2.929e-9 Identity = 43/171 (25.15%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 152 LHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSV 619 + ++ E + L YY M +N + +PKF G+Y + ++ KN++ ++ PS ++H L YD+K ST KS +Y L DF HP+G + +I+ + D L +++ YSL + VHN +++ +E E + R + Sbjct: 188 IKTVQHKEGEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCLQTSNAKNIR---LVVMNNLLPSSVKMH----LKYDLKGSTFKRKANKAERAKKSPTYKDL-DFMEQHPNGIFLEAETYAALIKTIQRDCTVLESFKIMDYSLLLGVHNLDVALKEKQSEQRKPLRAPL 347
BLAST of SMED30024217 vs. Ensembl Fly
Match: PIP5K59B (gene:FBgn0034789 transcript:FBtr0071900) HSP 1 Score: 60.077 bits (144), Expect = 2.996e-9 Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 197 LKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSV 619 L YY M +N + +PKF G+Y + ++ KN++ ++ PS ++H L YD+K ST KS +Y L DF HP+G + +I+ + D L +++ YSL + VHN +++ +E E + R + Sbjct: 203 LPGYY---MNLNQNPRTLLPKFFGLYCLQTSNAKNIR---LVVMNNLLPSSVKMH----LKYDLKGSTFKRKANKAERAKKSPTYKDL-DFMEQHPNGIFLEAETYAALIKTIQRDCTVLESFKIMDYSLLLGVHNLDVALKEKQSEQRKPLRAPL 347
BLAST of SMED30024217 vs. Ensembl Fly
Match: PIP5K59B (gene:FBgn0034789 transcript:FBtr0304923) HSP 1 Score: 60.077 bits (144), Expect = 3.178e-9 Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 197 LKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSV 619 L YY M +N + +PKF G+Y + ++ KN++ ++ PS ++H L YD+K ST KS +Y L DF HP+G + +I+ + D L +++ YSL + VHN +++ +E E + R + Sbjct: 203 LPGYY---MNLNQNPRTLLPKFFGLYCLQTSNAKNIR---LVVMNNLLPSSVKMH----LKYDLKGSTFKRKANKAERAKKSPTYKDL-DFMEQHPNGIFLEAETYAALIKTIQRDCTVLESFKIMDYSLLLGVHNLDVALKEKQSEQRKPLRAPL 347
BLAST of SMED30024217 vs. Ensembl Fly
Match: PIP5K59B (gene:FBgn0034789 transcript:FBtr0304921) HSP 1 Score: 59.6918 bits (143), Expect = 3.598e-9 Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 2 Query: 197 LKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSV 619 L YY M +N + +PKF G+Y + ++ KN++ ++ PS ++H L YD+K ST KS +Y L DF HP+G + +I+ + D L +++ YSL + VHN +++ +E E + R + Sbjct: 203 LPGYY---MNLNQNPRTLLPKFFGLYCLQTSNAKNIR---LVVMNNLLPSSVKMH----LKYDLKGSTFKRKANKAERAKKSPTYKDL-DFMEQHPNGIFLEAETYAALIKTIQRDCTVLESFKIMDYSLLLGVHNLDVALKEKQSEQRKPLRAPL 347
BLAST of SMED30024217 vs. Ensembl Fly
Match: PIP5K59B (gene:FBgn0034789 transcript:FBtr0339762) HSP 1 Score: 59.6918 bits (143), Expect = 3.799e-9 Identity = 43/171 (25.15%), Postives = 77/171 (45.03%), Query Frame = 2 Query: 152 LHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSV 619 + ++ E + L YY M +N + +PKF G+Y + ++ KN++ ++ PS ++H L YD+K ST KS +Y L DF HP+G + +I+ + D L +++ YSL + VHN +++ +E E + R + Sbjct: 188 IKTVQHKEGEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCLQTSNAKNIR---LVVMNNLLPSSVKMH----LKYDLKGSTFKRKANKAERAKKSPTYKDL-DFMEQHPNGIFLEAETYAALIKTIQRDCTVLESFKIMDYSLLLGVHNLDVALKEKQSEQRKPLRAPL 347
BLAST of SMED30024217 vs. Ensembl Zebrafish
Match: pip5k1cb (phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]) HSP 1 Score: 53.5286 bits (127), Expect = 4.650e-7 Identity = 41/164 (25.00%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKSSSYNGLN----DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 + + T+ ++ L + E + L YY M +N + +PKF G+Y + + GKN++ ++ P FR+H +F+L Y ++S K N DF + DG L+++ +++ + D L +++ YSL + VHN ++RE Sbjct: 174 IFYVTRDDEFILKTVMHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCVQ-SGGKNIR---IVVMNNVLPRVFRMHLKFDLKGSTYKRRASKKEREKNRPTYKDLDFMQDVQDGLLLDVDTYNALLKTLQRDCLVLESFKIMDYSLLLGVHNVEQAERE 330
BLAST of SMED30024217 vs. Ensembl Zebrafish
Match: pip5k1cb (phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b [Source:ZFIN;Acc:ZDB-GENE-110408-21]) HSP 1 Score: 53.1434 bits (126), Expect = 5.367e-7 Identity = 41/164 (25.00%), Postives = 77/164 (46.95%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKSSSYNGLN----DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 + + T+ ++ L + E + L YY M +N + +PKF G+Y + + GKN++ ++ P FR+H +F+L Y ++S K N DF + DG L+++ +++ + D L +++ YSL + VHN ++RE Sbjct: 174 IFYVTRDDEFILKTVMHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCVQ-SGGKNIR---IVVMNNVLPRVFRMHLKFDLKGSTYKRRASKKEREKNRPTYKDLDFMQDVQDGLLLDVDTYNALLKTLQRDCLVLESFKIMDYSLLLGVHNVEQAERE 330
BLAST of SMED30024217 vs. Ensembl Xenopus
Match: pip5k1a (phosphatidylinositol-4-phosphate 5-kinase, type I, alpha [Source:NCBI gene;Acc:448746]) HSP 1 Score: 54.6842 bits (130), Expect = 1.839e-7 Identity = 47/197 (23.86%), Postives = 88/197 (44.67%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE--LDDEIKNN-RRTSVLPKMYKSSDAENHNVYRRAS 679 ++ + ++ E + L YY M +N + +PKF G+Y + GKN++ ++ P R+H L YD+K ST KS +Y L DF + PDG ++ + + + D L+ +++ YSL + VHN + +++E +D +++ RR + +Y ++ RR Sbjct: 28 EFIIKTVQHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFYGLYCVQAG-GKNIR---IVVMNNLLPRSVRMH----LKYDLKGSTYKRRASAKEREKKSPTYKDL-DFLQDLPDGLFLDPDMHNALCKTIQRDCLVLQSFKIMDYSLLVGVHNMDCAQKETAVDGHTQSDTRRPAAQKALYSTAMESIQGEARRGG 212
BLAST of SMED30024217 vs. Ensembl Mouse
Match: Pip5k1c (phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma [Source:MGI Symbol;Acc:MGI:1298224]) HSP 1 Score: 49.2914 bits (116), Expect = 9.401e-6 Identity = 45/177 (25.42%), Postives = 81/177 (45.76%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKS-----SSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKS 640 K +HK E + L YY M +N + +PKF G+Y + + GKN++ ++ V P ++H +F+L Y ++S K +Y L DF + P+G L++ +++ + D L +++ YSL + VHN + +RE E ++ P K+ Sbjct: 188 KTVMHK----EAEFLQKLLPGYY---MNLNQNPRTLLPKFYGLYCVQ-SGGKNIRVV--VMNNV-LPRVVKMHLKFDLKGSTYKRRASKKEKEKSLPTYKDL-DFMQDMPEGLLLDSDTFGALVKTLQRDCLVLESFKIMDYSLLLGVHNIDQQERERQAEGAQSKADEKRPVAQKA 352
BLAST of SMED30024217 vs. UniProt/SwissProt
Match: sp|O48709|PI5K3_ARATH (Phosphatidylinositol 4-phosphate 5-kinase 3 OS=Arabidopsis thaliana OX=3702 GN=PIP5K3 PE=4 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 7.137e-7 Identity = 52/196 (26.53%), Postives = 84/196 (42.86%), Query Frame = 2 Query: 131 TQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLN--------DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVH--------NFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYR 670 TQ +Y + +K SE+ ++ L YY+ S + KF G++ K G+ T F++ F SE+RIHK+F+L T ++ D KY F + + + I + D EFL R++ YSL I +H + +L D E K R L ++ +S+ A+ V R Sbjct: 434 TQDERYMIKTMKKSEIKVLLKMLPNYYEHVSKYKNSLVTKFFGVHCVKPVGGQK---TRFIVMGNLFCSEYRIHKRFDLKGSSHGRTIDKDEGEIDETTTLKDLDLKYV----FRLETSWFQAFINQIDLDCEFLEAERIMDYSLLIGLHFRESGMRDDISLGIGRRDQEDKLMRGNGPLMRLGESTPAKAEQVSR 622
BLAST of SMED30024217 vs. TrEMBL
Match: A0A1B0GC28 (PIPK domain-containing protein OS=Glossina morsitans morsitans OX=37546 PE=4 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.954e-8 Identity = 73/319 (22.88%), Postives = 125/319 (39.18%), Query Frame = 2 Query: 236 SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRC----TRKITTIASYADGFENFLLQQAFRCV 1144 + +PKF G+Y + ++GKN++ ++ PS ++H L YD+K ST KS +Y L DF +HP+G + +I+ + D L +++ YSL + VHN +L+ +E K ++T Y++ D++N + K N +S +++ + I NR ++ R + M + D G I KGE L +F+ I Y K L+ TFK T + + YA F+NF+ + FR + Sbjct: 107 TLLPKFFGLYCLQSSNGKNIR---LVVMNNLLPSYVKMH----LKYDLKGSTFKRKASKAERAKKSPTYKDL-DFMEHHPNGIFLEAETYSALIKTIQRDCTVLESFKIMDYSLLVGVHNLDLATKEKQKIQKPPQKT-----QYQTEDSDNEETTPTVA----------------------KANETNSDNNEDDTQSNINRNRSNRQRLVAHSTAMES----------IQAESEPIDDEDDMPPGGIPARSEKGERLLLFVGIIDILQS----YRLKKKLEHTFKSIIHDGDTVSVCRPSFYAQRFQNFMAKTVFRKI 376
BLAST of SMED30024217 vs. TrEMBL
Match: A0A5K3ESS6 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.872e-8 Identity = 81/355 (22.82%), Postives = 136/355 (38.31%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLN-----------DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQ------CDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDM 1156 ++ + ++ E + L YY + + +PKF G++ Y+ + GKN++ F++ PS ++H++ YD+K S+ N DFK HPDG + +++ E D L R++ YSL + VHNF+ ++R+ + + + + V+P+ SS +H RAS PP TAS + S RT + K +T AK++ D KA G + G+ L +F+ I + LKS T +T + YA F+N L FR + M Sbjct: 169 EFIIKTVQHKEANFLQKLLPEYYMNLVQHTRTLLPKFYGLHCYQCS-GKNIR---FVVMNNLLPSSVKMHER----YDLKGSSYKRKANDRELAKASPTLKDLDFKERHPDGIWLEADTYDALMKTIERDCRVLESFRIMDYSLLLGVHNFDQAERDRNRKKERSSDNGVIPEDGLSS---SHAPNLRAS-------------------SPPVAAGRKGGDVITASRRSVSPFNRSAFRTK----LGNKRLTAFSTAMESIEAKVEPVEIEPTDPGKATLLGGLPARSASGDRLFLFIGIIDILQSYRMAKKMEHTLKSVVIDAETVSVTNPSFYARRFQNALGTCIFRKIPSPM 489
BLAST of SMED30024217 vs. TrEMBL
Match: G4LZK4 (Phosphatidylinositol-4-phosphate 5-kinase type I, putative OS=Schistosoma mansoni OX=6183 GN=Smp_124970 PE=4 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.173e-8 Identity = 64/253 (25.30%), Postives = 116/253 (45.85%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST-----------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE-LDDEIKNNRRTSVLPKMYKSSDAENHNVYRRAS---ISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTS 832 + + +Q ++ + ++ E + L Y+ M + +PK+ G+Y Y+ + KN++ F++ PS RIH++ YD+K ST KSS DF NHPDG + +++ E D L+ R++ YSL + +HN + +KRE L + + ++T+V + +SSD +++ + S IS ++N N S S+ S ++G+ ES +TS Sbjct: 159 IFYISQDDEFIIKTVQHKEGEFLQKLLPEYFMNLMQHPRTLLPKYYGLYCYQ-SGHKNIR---FVVMNNLLPSSVRIHEK----YDLKGSTYGRQASDAERAKSSPTLKDLDFIENHPDGIWLEAETYDALLKTIERDCLVLKSFRIMDYSLLLGIHNLDQAKRERLARKQASEKQTTVNQRGDESSDLSPNSIPKMKSNGLISHISNKSNENN-----------TNQSSSPSNGVGSGGLLGTVNESSNKTS 392
BLAST of SMED30024217 vs. TrEMBL
Match: A0A5K4F7F6 (Phosphatidylinositol-4-phosphate 5-kinase type I, putative OS=Schistosoma mansoni OX=6183 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.211e-8 Identity = 64/253 (25.30%), Postives = 116/253 (45.85%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST-----------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE-LDDEIKNNRRTSVLPKMYKSSDAENHNVYRRAS---ISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTS 832 + + +Q ++ + ++ E + L Y+ M + +PK+ G+Y Y+ + KN++ F++ PS RIH++ YD+K ST KSS DF NHPDG + +++ E D L+ R++ YSL + +HN + +KRE L + + ++T+V + +SSD +++ + S IS ++N N S S+ S ++G+ ES +TS Sbjct: 159 IFYISQDDEFIIKTVQHKEGEFLQKLLPEYFMNLMQHPRTLLPKYYGLYCYQ-SGHKNIR---FVVMNNLLPSSVRIHEK----YDLKGSTYGRQASDAERAKSSPTLKDLDFIENHPDGIWLEAETYDALLKTIERDCLVLKSFRIMDYSLLLGIHNLDQAKRERLARKQASEKQTTVNQRGDESSDLSPNSIPKMKSNGLISHISNKSNENN-----------TNQSSSPSNGVGSGGLLGTVNESSNKTS 392
BLAST of SMED30024217 vs. TrEMBL
Match: A0A5K3ESR6 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.330e-8 Identity = 50/193 (25.91%), Postives = 92/193 (47.67%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST-----------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISP 688 ++ + ++ E + L YY + + +PKF G++ Y+ + GKN++ F++ PS ++H++ YD+K S+ K+S DFK HPDG + +++ E D L R++ YSL + VHNF+ ++R+ + + + + V+P+ SS +H RAS P Sbjct: 169 EFIIKTVQHKEANFLQKLLPEYYMNLVQHTRTLLPKFYGLHCYQCS-GKNIR---FVVMNNLLPSSVKMHER----YDLKGSSYKRKANDRELAKASPTLKDLDFKERHPDGIWLEADTYDALMKTIERDCRVLESFRIMDYSLLLGVHNFDQAERDRNRKKERSSDNGVIPEDGLSS---SHAPNLRASSPP 350
BLAST of SMED30024217 vs. Ensembl Cavefish
Match: pip5k1cb (phosphatidylinositol 4-phosphate 5-kinase type-1 gamma-like [Source:NCBI gene;Acc:103026952]) HSP 1 Score: 55.8398 bits (133), Expect = 6.201e-8 Identity = 43/169 (25.44%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKS-----SSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + + T+ ++ + ++ E + L YY M +N + +PKF G+Y + + GKN++ L+ P FR+H +F+L Y ++S K ++ L DF PDG L++ +++ + D L +++ YSL + VHN + ++RE E Sbjct: 174 IFYVTRDDEFIIKTVQHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCIQ-SGGKNIR---ILVMNNVLPRVFRMHLKFDLKGSTYKRRASKKEREKSRPTFKDL-DFLQEVPDGLLLDTDTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAEREQQTE 334
BLAST of SMED30024217 vs. Ensembl Cavefish
Match: pip5k1cb (phosphatidylinositol 4-phosphate 5-kinase type-1 gamma-like [Source:NCBI gene;Acc:103026952]) HSP 1 Score: 55.8398 bits (133), Expect = 6.510e-8 Identity = 43/169 (25.44%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKS-----SSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + + T+ ++ + ++ E + L YY M +N + +PKF G+Y + + GKN++ L+ P FR+H +F+L Y ++S K ++ L DF PDG L++ +++ + D L +++ YSL + VHN + ++RE E Sbjct: 174 IFYVTRDDEFIIKTVQHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCIQ-SGGKNIR---ILVMNNVLPRVFRMHLKFDLKGSTYKRRASKKEREKSRPTFKDL-DFLQEVPDGLLLDTDTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAEREQQTE 334
BLAST of SMED30024217 vs. Ensembl Cavefish
Match: pip5k1cb (phosphatidylinositol 4-phosphate 5-kinase type-1 gamma-like [Source:NCBI gene;Acc:103026952]) HSP 1 Score: 55.4546 bits (132), Expect = 7.497e-8 Identity = 43/169 (25.44%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKS-----SSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + + T+ ++ + ++ E + L YY M +N + +PKF G+Y + + GKN++ L+ P FR+H +F+L Y ++S K ++ L DF PDG L++ +++ + D L +++ YSL + VHN + ++RE E Sbjct: 159 IFYVTRDDEFIIKTVQHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCIQ-SGGKNIR---ILVMNNVLPRVFRMHLKFDLKGSTYKRRASKKEREKSRPTFKDL-DFLQEVPDGLLLDTDTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAEREQQTE 319
BLAST of SMED30024217 vs. Ensembl Cavefish
Match: pip5k1cb (phosphatidylinositol 4-phosphate 5-kinase type-1 gamma-like [Source:NCBI gene;Acc:103026952]) HSP 1 Score: 55.4546 bits (132), Expect = 8.125e-8 Identity = 43/169 (25.44%), Postives = 81/169 (47.93%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKS-----SSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + + T+ ++ + ++ E + L YY M +N + +PKF G+Y + + GKN++ L+ P FR+H +F+L Y ++S K ++ L DF PDG L++ +++ + D L +++ YSL + VHN + ++RE E Sbjct: 174 IFYVTRDDEFIIKTVQHKEAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCIQ-SGGKNIR---ILVMNNVLPRVFRMHLKFDLKGSTYKRRASKKEREKSRPTFKDL-DFLQEVPDGLLLDTDTFSALVKTLQRDCLVLESFKIMDYSLLLGVHNLDQAEREQQTE 334
BLAST of SMED30024217 vs. Ensembl Sea Lamprey
Match: pip5k1ab (phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]) HSP 1 Score: 55.4546 bits (132), Expect = 9.433e-9 Identity = 44/168 (26.19%), Postives = 78/168 (46.43%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKSSSYNGLN----DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + F T ++ + + E + L YY M +N + +PKF G+Y + + GKN++ ++ P ++H +F+L Y ++S K + DF +HPDG L++ + + + D L +++ YSL I VHN + S+RE D E Sbjct: 104 VFFVTSDDEFIIKTVMHKEAEFLQKLLPGYY---MNLNQNVRTLLPKFYGLYCVQ-SGGKNIR---LVVMNNLLPRAMKMHIKFDLKGSTYKRRASRKEREKSNPTFKDLDFIQDHPDGLLLDSDTYNAMSKTLQRDCLVLESFKIMDYSLLIGVHNLDQSQRERDAE 264
BLAST of SMED30024217 vs. Ensembl Sea Lamprey
Match: pip5k1ab (phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]) HSP 1 Score: 55.4546 bits (132), Expect = 1.141e-8 Identity = 44/168 (26.19%), Postives = 78/168 (46.43%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKSSSYNGLN----DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + F T ++ + + E + L YY M +N + +PKF G+Y + + GKN++ ++ P ++H +F+L Y ++S K + DF +HPDG L++ + + + D L +++ YSL I VHN + S+RE D E Sbjct: 104 VFFVTSDDEFIIKTVMHKEAEFLQKLLPGYY---MNLNQNVRTLLPKFYGLYCVQ-SGGKNIR---LVVMNNLLPRAMKMHIKFDLKGSTYKRRASRKEREKSNPTFKDLDFIQDHPDGLLLDSDTYNAMSKTLQRDCLVLESFKIMDYSLLIGVHNLDQSQRERDAE 264
BLAST of SMED30024217 vs. Ensembl Sea Lamprey
Match: pip5k1ab (phosphatidylinositol-4-phosphate 5-kinase, type I, alpha, b [Source:ZFIN;Acc:ZDB-GENE-041111-123]) HSP 1 Score: 54.6842 bits (130), Expect = 1.846e-8 Identity = 44/168 (26.19%), Postives = 78/168 (46.43%), Query Frame = 2 Query: 119 LIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL---FYDVKSSTKSSSYNGLN----DFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDE 592 + F T ++ + + E + L YY M +N + +PKF G+Y + + GKN++ ++ P ++H +F+L Y ++S K + DF +HPDG L++ + + + D L +++ YSL I VHN + S+RE D E Sbjct: 94 VFFVTSDDEFIIKTVMHKEAEFLQKLLPGYY---MNLNQNVRTLLPKFYGLYCVQ-SGGKNIR---LVVMNNLLPRAMKMHIKFDLKGSTYKRRASRKEREKSNPTFKDLDFIQDHPDGLLLDSDTYNAMSKTLQRDCLVLESFKIMDYSLLIGVHNLDQSQRERDAE 254
BLAST of SMED30024217 vs. Ensembl Medaka
Match: pip5k1ca (phosphatidylinositol-4-phosphate 5-kinase type 1 gamma [Source:NCBI gene;Acc:101162441]) HSP 1 Score: 50.0618 bits (118), Expect = 4.350e-6 Identity = 43/161 (26.71%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 K +HK E + L YY M +N + +PKF G+Y + + GKN++ ++ V P R+H L YD+K ST ++ L DF + PDG +++ +++ + D L +++ YSL + VHN + + RE Sbjct: 192 KTVMHK----EAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCVQ-SGGKNIRV--VVMNNV-LPRVVRMH----LKYDLKGSTYKRRASKKEREKARPTFKDL-DFMQDTPDGLMLDQDTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNMDQADRE 336
BLAST of SMED30024217 vs. Ensembl Medaka
Match: pip5k1ca (phosphatidylinositol-4-phosphate 5-kinase type 1 gamma [Source:NCBI gene;Acc:101162441]) HSP 1 Score: 49.6766 bits (117), Expect = 5.071e-6 Identity = 43/161 (26.71%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 K +HK E + L YY M +N + +PKF G+Y + + GKN++ ++ V P R+H L YD+K ST ++ L DF + PDG +++ +++ + D L +++ YSL + VHN + + RE Sbjct: 192 KTVMHK----EAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCVQ-SGGKNIRV--VVMNNV-LPRVVRMH----LKYDLKGSTYKRRASKKEREKARPTFKDL-DFMQDTPDGLMLDQDTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNMDQADRE 336
BLAST of SMED30024217 vs. Ensembl Medaka
Match: pip5k1ca (phosphatidylinositol-4-phosphate 5-kinase type 1 gamma [Source:NCBI gene;Acc:101162441]) HSP 1 Score: 49.2914 bits (116), Expect = 6.762e-6 Identity = 43/161 (26.71%), Postives = 73/161 (45.34%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNY---SFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSST------------KSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 K +HK E + L YY M +N + +PKF G+Y + + GKN++ ++ V P R+H L YD+K ST ++ L DF + PDG +++ +++ + D L +++ YSL + VHN + + RE Sbjct: 144 KTVMHK----EAEFLQKLLPGYY---MNLNQNPRTLLPKFFGLYCVQ-SGGKNIRVV--VMNNV-LPRVVRMH----LKYDLKGSTYKRRASKKEREKARPTFKDL-DFMQDTPDGLMLDQDTYNALVKTLQRDCLVLESFKIMDYSLLLGVHNMDQADRE 288
BLAST of SMED30024217 vs. Planmine SMEST
Match: SMESG000065539.1 (SMESG000065539.1) HSP 1 Score: 869.766 bits (2246), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 2 Query: 59 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLIXXXXXXXXXLFSNHQNISELPSSSEFI 1345 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLISDSSSEDSSLFSNHQNISELPSSSEFI Sbjct: 107 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLISDSSSEDSSLFSNHQNISELPSSSEFI 535
BLAST of SMED30024217 vs. Planmine SMEST
Match: SMESG000065539.1 (SMESG000065539.1) HSP 1 Score: 868.611 bits (2243), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 2 Query: 59 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLIXXXXXXXXXLFSNHQNISELPSSSEFI 1345 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLISDSSSEDSSLFSNHQNISELPSSSEFI Sbjct: 94 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLISDSSSEDSSLFSNHQNISELPSSSEFI 522
BLAST of SMED30024217 vs. Planmine SMEST
Match: SMESG000065539.1 (SMESG000065539.1) HSP 1 Score: 868.226 bits (2242), Expect = 0.000e+0 Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 2 Query: 59 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLIXXXXXXXXXLFSNHQNISELPSSSEFI 1345 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLISDSSSEDSSLFSNHQNISELPSSSEFI Sbjct: 90 GSIVKYDLSFCAHSHFDKDRLIFNTQYGKYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFELFYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRELDDEIKNNRRTSVLPKMYKSSDAENHNVYRRASISPYRTPLDDNQRMKIGEKHPPKVNHHHSSSSDTASLIIIGSNRESKGRTSDLAAIMAKGFNKVNTTFLFNSAKLQCDFYKAKRHGAIFVYDVKGEHLAVFLSFGHIFDKTEDLYTYKSLLKSTFKCRCTRKITTIASYADGFENFLLQQAFRCVKPDMSFELWPDEINTPSDAEKKNAPENALDKWAHIKATLISDSSSEDSSLFSNHQNISELPSSSEFI 518
BLAST of SMED30024217 vs. Planmine SMEST
Match: SMESG000010509.1 (SMESG000010509.1) HSP 1 Score: 53.9138 bits (128), Expect = 1.961e-7 Identity = 39/153 (25.49%), Postives = 70/153 (45.75%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL-------FYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 ++ + + E + L YY M + +PKF G+Y Y+ GKN++ F++ PS +IH++++L + K +KSS DFK NHP+G ++ ++ D L ++ +SL + +HN + K E Sbjct: 150 EFIIKTVDKKEAIFLQKLLPEYYINLMQHPRTLLPKFYGLYCYETM-GKNIR---FVIMNNLLPS-IKIHEKYDLKGSTYKRYASKKERSKSSPTLKDLDFKENHPNGLILEPETYDALMSTISRDCMVLESFSIMDFSLLLGIHNVDQYKLE 297
BLAST of SMED30024217 vs. Planmine SMEST
Match: SMESG000010509.1 (SMESG000010509.1) HSP 1 Score: 53.5286 bits (127), Expect = 2.052e-7 Identity = 39/153 (25.49%), Postives = 70/153 (45.75%), Query Frame = 2 Query: 143 KYSLHKIKDSEMCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVKFPSEFRIHKQFEL-------FYDVKSSTKSSSYNGLNDFKYNHPDGFLMNIAQRKKVIEIFEHDFEFLRILRLLKYSLRIAVHNFNLSKRE 580 ++ + + E + L YY M + +PKF G+Y Y+ GKN++ F++ PS +IH++++L + K +KSS DFK NHP+G ++ ++ D L ++ +SL + +HN + K E Sbjct: 150 EFIIKTVDKKEAIFLQKLLPEYYINLMQHPRTLLPKFYGLYCYETM-GKNIR---FVIMNNLLPS-IKIHEKYDLKGSTYKRYASKKERSKSSPTLKDLDFKENHPNGLILEPETYDALMSTISRDCMVLESFSIMDFSLLLGIHNVDQYKLE 297 The following BLAST results are available for this feature:
BLAST of SMED30024217 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30024217 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 1
BLAST of SMED30024217 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 5
BLAST of SMED30024217 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 2
BLAST of SMED30024217 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 1
BLAST of SMED30024217 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 1
BLAST of SMED30024217 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 1
BLAST of SMED30024217 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 5
BLAST of SMED30024217 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 4
BLAST of SMED30024217 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 3
BLAST of SMED30024217 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30024217 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30024217 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 3
BLAST of SMED30024217 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024217 ID=SMED30024217|Name=SMED30024217|organism=Schmidtea mediterranea sexual|type=transcript|length=1402bpback to top protein sequence of SMED30024217-orf-1 >SMED30024217-orf-1 ID=SMED30024217-orf-1|Name=SMED30024217-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=391bp MCIITSYLKRYYQCSMGMNYSFIPKFLGIYSYKINDGKNVKTTHFLLREVback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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