SMED30024203
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Overview
Neoblast Clusters
Zeng et. al., 2018
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny AppEmbryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024203 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Alignments
SMED30024203 aligns in the following genomic locations:
Homology
BLAST of SMED30024203 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 114.775 bits (286), Expect = 3.424e-30 Identity = 123/150 (82.00%), Postives = 129/150 (86.00%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPT+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S+ EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA
Sbjct: 1059 EPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPIST--------EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA 1200 HSP 2 Score: 103.219 bits (256), Expect = 4.561e-26 Identity = 99/155 (63.87%), Postives = 115/155 (74.19%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMC NPS+AKLCK TCASST KSSTSGSS SST S+ EPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP
Sbjct: 965 EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTST--------EPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCP 1111 HSP 3 Score: 101.293 bits (251), Expect = 1.668e-25 Identity = 104/156 (66.67%), Postives = 122/156 (78.21%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPTVCPDMKDMCTNPSVAKLCK TCA STTPKSS+ GSS SST S+ EPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLCPA
Sbjct: 918 EPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQIST--------EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPA 1065 HSP 4 Score: 98.5969 bits (244), Expect = 1.487e-24 Identity = 110/162 (67.90%), Postives = 130/162 (80.25%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTTPKSSTSGSSKSSTSG SISSTPISTEPT+CP MKD+C NP+V+ +CKKTCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCASSTT +SS++ +S+SS STEPT+CP
Sbjct: 567 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCP 728 HSP 5 Score: 97.4413 bits (241), Expect = 3.728e-24 Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCKNTCA S ++ S++ S S+ TEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCA STT KSSS +S SS STEPT+CP
Sbjct: 817 EPTVCPDMKDMCTNPSVAKLCKNTCA---------SSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCP 970 HSP 6 Score: 95.5153 bits (236), Expect = 1.687e-23 Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C NP+V+ +CK TCASST+ S +S + EPT+CP MKDLC NPAVS++CKKTCASST+ S S+ STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1106 EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMST--------------EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1219 HSP 7 Score: 95.1301 bits (235), Expect = 2.436e-23 Identity = 99/155 (63.87%), Postives = 120/155 (77.42%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTT +SSTSGSSKSSTS S+ EPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCASSTT KSS++ +S SS STEPT+CP
Sbjct: 676 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMST--------EPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCP 822 HSP 8 Score: 94.7449 bits (234), Expect = 3.553e-23 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+CTNP+V+ +CK TCASSTT KSS++ +S+SS S+ EPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1147 EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTST--------EPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1282 HSP 9 Score: 94.7449 bits (234), Expect = 3.587e-23 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TC SSTTP+SSTSGSSKSSTSGSSISS P+STEPT+CP MKD+C NP+V+ +CK TCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 458 EPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 592 HSP 10 Score: 94.3597 bits (233), Expect = 5.491e-23 Identity = 95/136 (69.85%), Postives = 107/136 (78.68%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX--------------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TCA TTPKSSTSGSSKSSTSGSSISSTPISTEPT+CP MKD+C NP+V+ +CKKTC SST+ S +S MSTEPT+CP MKD+CTNP+V+ +CK TCA
Sbjct: 403 EPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCA 538 HSP 11 Score: 88.9669 bits (219), Expect = 4.065e-21 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT CP+MKD+C NP+VA +CK TC S+T KSSTSGS+ +ST S+ EP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 309 EPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPIST--------EPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 12 Score: 72.7886 bits (177), Expect = 1.811e-15 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C+ +V+ LCK TC SST+ KSSTS ++ S+T S+ EP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 94 EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLST--------EPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 13 Score: 68.9366 bits (167), Expect = 3.503e-14 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC S+T KSS++ ++ +S P STEP+LCP
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCP 361 HSP 14 Score: 67.3958 bits (163), Expect = 1.338e-13 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EP C M +C NP V+++C TCAS+T + + EPT+CP MKD+C VS +CKKTC SSTS S +S +STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCASNTFTSTESPT------------------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 15 Score: 55.0694 bits (131), Expect = 2.271e-9 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC SST+ KSS++ T+ S+ P STEP++CPA
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPA 147
BLAST of SMED30024203 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 114.775 bits (286), Expect = 3.630e-30 Identity = 123/150 (82.00%), Postives = 129/150 (86.00%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPT+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S+ EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA
Sbjct: 1062 EPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPIST--------EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA 1203 HSP 2 Score: 102.834 bits (255), Expect = 4.834e-26 Identity = 99/155 (63.87%), Postives = 115/155 (74.19%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMC NPS+AKLCK TCASST KSSTSGSS SST S+ EPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP
Sbjct: 968 EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTST--------EPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCP 1114 HSP 3 Score: 101.293 bits (251), Expect = 1.735e-25 Identity = 104/156 (66.67%), Postives = 122/156 (78.21%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPTVCPDMKDMCTNPSVAKLCK TCA STTPKSS+ GSS SST S+ EPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLCPA
Sbjct: 921 EPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQIST--------EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPA 1068 HSP 4 Score: 98.5969 bits (244), Expect = 1.531e-24 Identity = 110/162 (67.90%), Postives = 130/162 (80.25%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTTPKSSTSGSSKSSTSG SISSTPISTEPT+CP MKD+C NP+V+ +CKKTCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCASSTT +SS++ +S+SS STEPT+CP
Sbjct: 570 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCP 731 HSP 5 Score: 97.4413 bits (241), Expect = 3.838e-24 Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCKNTCA S ++ S++ S S+ TEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCA STT KSSS +S SS STEPT+CP
Sbjct: 820 EPTVCPDMKDMCTNPSVAKLCKNTCA---------SSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCP 973 HSP 6 Score: 95.5153 bits (236), Expect = 1.753e-23 Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C NP+V+ +CK TCASST+ S +S + EPT+CP MKDLC NPAVS++CKKTCASST+ S S+ STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1109 EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMST--------------EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1222 HSP 7 Score: 95.1301 bits (235), Expect = 2.508e-23 Identity = 99/155 (63.87%), Postives = 120/155 (77.42%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTT +SSTSGSSKSSTS S+ EPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCASSTT KSS++ +S SS STEPT+CP
Sbjct: 679 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMST--------EPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCP 825 HSP 8 Score: 94.7449 bits (234), Expect = 3.623e-23 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TC SSTTP+SSTSGSSKSSTSGSSISS P+STEPT+CP MKD+C NP+V+ +CK TCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 461 EPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 595 HSP 9 Score: 94.7449 bits (234), Expect = 3.658e-23 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+CTNP+V+ +CK TCASSTT KSS++ +S+SS S+ EPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1150 EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTST--------EPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1285 HSP 10 Score: 94.3597 bits (233), Expect = 5.545e-23 Identity = 95/136 (69.85%), Postives = 107/136 (78.68%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX--------------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TCA TTPKSSTSGSSKSSTSGSSISSTPISTEPT+CP MKD+C NP+V+ +CKKTC SST+ S +S MSTEPT+CP MKD+CTNP+V+ +CK TCA
Sbjct: 406 EPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCA 541 HSP 11 Score: 88.9669 bits (219), Expect = 3.988e-21 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT CP+MKD+C NP+VA +CK TC S+T KSSTSGS+ +ST S+ EP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 312 EPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPIST--------EPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 431 HSP 12 Score: 72.7886 bits (177), Expect = 1.846e-15 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C+ +V+ LCK TC SST+ KSSTS ++ S+T S+ EP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 97 EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLST--------EPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 215 HSP 13 Score: 68.9366 bits (167), Expect = 3.571e-14 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC S+T KSS++ ++ +S P STEP+LCP
Sbjct: 271 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCP 364 HSP 14 Score: 67.3958 bits (163), Expect = 1.339e-13 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EP C M +C NP V+++C TCAS+T + + EPT+CP MKD+C VS +CKKTC SSTS S +S +STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 60 EPAQCAFMTQICHNPGVSQICPKTCASNTFTSTESPT------------------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 169 HSP 15 Score: 55.0694 bits (131), Expect = 2.207e-9 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC SST+ KSS++ T+ S+ P STEP++CPA
Sbjct: 60 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPA 150
BLAST of SMED30024203 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 114.775 bits (286), Expect = 3.846e-30 Identity = 123/150 (82.00%), Postives = 129/150 (86.00%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPT+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S+ EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA
Sbjct: 1060 EPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPIST--------EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA 1201 HSP 2 Score: 102.834 bits (255), Expect = 5.073e-26 Identity = 99/155 (63.87%), Postives = 115/155 (74.19%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMC NPS+AKLCK TCASST KSSTSGSS SST S+ EPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP
Sbjct: 966 EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTST--------EPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCP 1112 HSP 3 Score: 101.293 bits (251), Expect = 1.856e-25 Identity = 104/156 (66.67%), Postives = 122/156 (78.21%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPTVCPDMKDMCTNPSVAKLCK TCA STTPKSS+ GSS SST S+ EPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLCPA
Sbjct: 919 EPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQIST--------EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPA 1066 HSP 4 Score: 97.8265 bits (242), Expect = 2.735e-24 Identity = 117/163 (71.78%), Postives = 135/163 (82.82%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTTPKSSTSGSSKSSTSG SISSTPISTEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCASSTT +SS++ +S+SS STEPT+CP
Sbjct: 567 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCP 729 HSP 5 Score: 97.4413 bits (241), Expect = 4.146e-24 Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCKNTCA S ++ S++ S S+ TEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCA STT KSSS +S SS STEPT+CP
Sbjct: 818 EPTVCPDMKDMCTNPSVAKLCKNTCA---------SSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCP 971 HSP 6 Score: 95.5153 bits (236), Expect = 1.858e-23 Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C NP+V+ +CK TCASST+ S +S + EPT+CP MKDLC NPAVS++CKKTCASST+ S S+ STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1107 EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMST--------------EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1220 HSP 7 Score: 95.1301 bits (235), Expect = 2.710e-23 Identity = 99/155 (63.87%), Postives = 120/155 (77.42%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTT +SSTSGSSKSSTS S+ EPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCASSTT KSS++ +S SS STEPT+CP
Sbjct: 677 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMST--------EPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCP 823 HSP 8 Score: 94.7449 bits (234), Expect = 3.876e-23 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+CTNP+V+ +CK TCASSTT KSS++ +S+SS S+ EPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1148 EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTST--------EPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1283 HSP 9 Score: 94.7449 bits (234), Expect = 3.914e-23 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TC SSTTP+SSTSGSSKSSTSGSSISS P+STEPT+CP MKD+C NP+V+ +CK TCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 458 EPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 592 HSP 10 Score: 93.9745 bits (232), Expect = 5.991e-23 Identity = 95/136 (69.85%), Postives = 107/136 (78.68%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX--------------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TCA TTPKSSTSGSSKSSTSGSSISSTPISTEPT+CP MKD+C NP+V+ +CKKTC SST+ S +S MSTEPT+CP MKD+CTNP+V+ +CK TCA
Sbjct: 403 EPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCA 538 HSP 11 Score: 88.5817 bits (218), Expect = 4.435e-21 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT CP+MKD+C NP+VA +CK TC S+T KSSTSGS+ +ST S+ EP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 309 EPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPIST--------EPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 12 Score: 72.4034 bits (176), Expect = 1.975e-15 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C+ +V+ LCK TC SST+ KSSTS ++ S+T S+ EP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 94 EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLST--------EPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 13 Score: 68.9366 bits (167), Expect = 3.784e-14 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC S+T KSS++ ++ +S P STEP+LCP
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCP 361 HSP 14 Score: 67.0106 bits (162), Expect = 1.460e-13 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EP C M +C NP V+++C TCAS+T + + EPT+CP MKD+C VS +CKKTC SSTS S +S +STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCASNTFTSTESPT------------------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 15 Score: 55.0694 bits (131), Expect = 2.429e-9 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC SST+ KSS++ T+ S+ P STEP++CPA
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPA 147
BLAST of SMED30024203 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 114.775 bits (286), Expect = 3.922e-30 Identity = 123/150 (82.00%), Postives = 129/150 (86.00%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPT+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S+ EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA
Sbjct: 1063 EPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPIST--------EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA 1204 HSP 2 Score: 102.834 bits (255), Expect = 5.275e-26 Identity = 99/155 (63.87%), Postives = 115/155 (74.19%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMC NPS+AKLCK TCASST KSSTSGSS SST S+ EPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP
Sbjct: 969 EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTST--------EPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCP 1115 HSP 3 Score: 101.293 bits (251), Expect = 1.892e-25 Identity = 104/156 (66.67%), Postives = 122/156 (78.21%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPTVCPDMKDMCTNPSVAKLCK TCA STTPKSS+ GSS SST S+ EPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLCPA
Sbjct: 922 EPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQIST--------EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPA 1069 HSP 4 Score: 97.8265 bits (242), Expect = 2.762e-24 Identity = 117/163 (71.78%), Postives = 135/163 (82.82%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTTPKSSTSGSSKSSTSG SISSTPISTEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCASSTT +SS++ +S+SS STEPT+CP
Sbjct: 570 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCP 732 HSP 5 Score: 97.4413 bits (241), Expect = 4.187e-24 Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCKNTCA S ++ S++ S S+ TEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCA STT KSSS +S SS STEPT+CP
Sbjct: 821 EPTVCPDMKDMCTNPSVAKLCKNTCA---------SSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCP 974 HSP 6 Score: 95.5153 bits (236), Expect = 1.895e-23 Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C NP+V+ +CK TCASST+ S +S + EPT+CP MKDLC NPAVS++CKKTCASST+ S S+ STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1110 EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMST--------------EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1223 HSP 7 Score: 95.1301 bits (235), Expect = 2.736e-23 Identity = 99/155 (63.87%), Postives = 120/155 (77.42%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTT +SSTSGSSKSSTS S+ EPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCASSTT KSS++ +S SS STEPT+CP
Sbjct: 680 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMST--------EPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCP 826 HSP 8 Score: 94.7449 bits (234), Expect = 3.914e-23 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TC SSTTP+SSTSGSSKSSTSGSSISS P+STEPT+CP MKD+C NP+V+ +CK TCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 461 EPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 595 HSP 9 Score: 94.7449 bits (234), Expect = 3.952e-23 Identity = 80/144 (55.56%), Postives = 98/144 (68.06%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+CTNP+V+ +CK TCASSTT KSS++ +S+SS S+ EPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1151 EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTST--------EPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1286 HSP 10 Score: 93.9745 bits (232), Expect = 5.992e-23 Identity = 95/136 (69.85%), Postives = 107/136 (78.68%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX--------------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TCA TTPKSSTSGSSKSSTSGSSISSTPISTEPT+CP MKD+C NP+V+ +CKKTC SST+ S +S MSTEPT+CP MKD+CTNP+V+ +CK TCA
Sbjct: 406 EPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCA 541 HSP 11 Score: 88.9669 bits (219), Expect = 4.309e-21 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT CP+MKD+C NP+VA +CK TC S+T KSSTSGS+ +ST S+ EP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 312 EPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPIST--------EPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 431 HSP 12 Score: 72.4034 bits (176), Expect = 2.014e-15 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C+ +V+ LCK TC SST+ KSSTS ++ S+T S+ EP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 97 EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLST--------EPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 215 HSP 13 Score: 68.9366 bits (167), Expect = 3.784e-14 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC S+T KSS++ ++ +S P STEP+LCP
Sbjct: 271 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCP 364 HSP 14 Score: 67.3958 bits (163), Expect = 1.405e-13 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EP C M +C NP V+++C TCAS+T + + EPT+CP MKD+C VS +CKKTC SSTS S +S +STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 60 EPAQCAFMTQICHNPGVSQICPKTCASNTFTSTESPT------------------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 169 HSP 15 Score: 55.0694 bits (131), Expect = 2.272e-9 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC SST+ KSS++ T+ S+ P STEP++CPA
Sbjct: 60 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPA 150
BLAST of SMED30024203 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 114.775 bits (286), Expect = 4.192e-30 Identity = 123/150 (82.00%), Postives = 129/150 (86.00%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPT+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S+ EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA
Sbjct: 1060 EPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPIST--------EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPA 1201 HSP 2 Score: 102.834 bits (255), Expect = 5.476e-26 Identity = 99/155 (63.87%), Postives = 115/155 (74.19%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMC NPS+AKLCK TCASST KSSTSGSS SST S+ EPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP
Sbjct: 966 EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTST--------EPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCP 1112 HSP 3 Score: 101.293 bits (251), Expect = 1.946e-25 Identity = 104/156 (66.67%), Postives = 122/156 (78.21%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EPTVCPDMKDMCTNPSVAKLCK TCA STTPKSS+ GSS SST S+ EPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLCPA
Sbjct: 919 EPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQIST--------EPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPA 1066 HSP 4 Score: 97.8265 bits (242), Expect = 2.981e-24 Identity = 117/163 (71.78%), Postives = 135/163 (82.82%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTTPKSSTSGSSKSSTSG SISSTPISTEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCASSTT +SS++ +S+SS STEPT+CP
Sbjct: 567 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCP 729 HSP 5 Score: 97.4413 bits (241), Expect = 4.519e-24 Identity = 96/163 (58.90%), Postives = 115/163 (70.55%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA--------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCKNTCA S ++ S++ S S+ TEPT+CP MKD+C NP+V+ +CKKTCA SSTS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTCA STT KSSS +S SS STEPT+CP
Sbjct: 818 EPTVCPDMKDMCTNPSVAKLCKNTCA---------SSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCP 971 HSP 6 Score: 95.5153 bits (236), Expect = 1.986e-23 Identity = 74/128 (57.81%), Postives = 89/128 (69.53%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C NP+V+ +CK TCASST+ S +S + EPT+CP MKDLC NPAVS++CKKTCASST+ S S+ STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1107 EPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMST--------------EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1220 HSP 7 Score: 95.1301 bits (235), Expect = 2.953e-23 Identity = 99/155 (63.87%), Postives = 120/155 (77.42%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPTVCPDMKDMCTNPSVAKLCK TCASSTT +SSTSGSSKSSTS S+ EPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCASSTT KSS++ +S SS STEPT+CP
Sbjct: 677 EPTVCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMST--------EPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCP 823 HSP 8 Score: 94.3597 bits (233), Expect = 4.224e-23 Identity = 90/135 (66.67%), Postives = 106/135 (78.52%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA-------------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TC SSTTP+SSTSGSSKSSTSGSSISS P+STEPT+CP MKD+C NP+V+ +CK TCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 458 EPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 592 HSP 9 Score: 93.9745 bits (232), Expect = 6.466e-23 Identity = 95/136 (69.85%), Postives = 107/136 (78.68%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX--------------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPTVCPDMKDMCTNPSVAKLCK TCA TTPKSSTSGSSKSSTSGSSISSTPISTEPT+CP MKD+C NP+V+ +CKKTC SST+ S +S MSTEPT+CP MKD+CTNP+V+ +CK TCA
Sbjct: 403 EPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCA 538 HSP 10 Score: 88.5817 bits (218), Expect = 4.561e-21 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT CP+MKD+C NP+VA +CK TC S+T KSSTSGS+ +ST S+ EP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 309 EPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPIST--------EPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 11 Score: 88.5817 bits (218), Expect = 5.324e-21 Identity = 76/129 (58.91%), Postives = 95/129 (73.64%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+CTNP+V+ +CK TCASSTT KSS++ +S+SS S+ EPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ +STEPT+CP MK LC NP V+ MCKKTCA
Sbjct: 1148 EPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTST--------EPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTEPTLCPDMKMLCNNPNVAKMCKKTCA 1268 HSP 12 Score: 72.4034 bits (176), Expect = 2.051e-15 Identity = 63/127 (49.61%), Postives = 87/127 (68.50%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EPT+CP MKD+C+ +V+ LCK TC SST+ KSSTS ++ S+T S+ EP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 94 EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLST--------EPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 13 Score: 68.9366 bits (167), Expect = 3.816e-14 Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCP 448
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC S+T KSS++ ++ +S P STEP+LCP
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCP 361 HSP 14 Score: 67.0106 bits (162), Expect = 1.458e-13 Identity = 57/128 (44.53%), Postives = 73/128 (57.03%), Query Frame = 2
Query: 2 EPTVCPDMKDMCTNPSVAKLCKNTCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 367
EP C M +C NP V+++C TCAS+T + + EPT+CP MKD+C VS +CKKTC SSTS S +S +STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCASNTFTSTESPT------------------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 15 Score: 55.0694 bits (131), Expect = 2.381e-9 Identity = 51/95 (53.68%), Postives = 66/95 (69.47%), Query Frame = 2
Query: 167 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLCPA 451
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC SST+ KSS++ T+ S+ P STEP++CPA
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPA 147 The following BLAST results are available for this feature:
BLAST of SMED30024203 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30024203 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30024203 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30024203 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30024203 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024203 ID=SMED30024203|Name=SMED30024203|organism=Schmidtea mediterranea sexual|type=transcript|length=451bpback to top protein sequence of SMED30024203-orf-1 >SMED30024203-orf-1 ID=SMED30024203-orf-1|Name=SMED30024203-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=150bp EPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSGSSKSSTSGSSISSback to top InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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