40S ribosomal protein S14

Overview


Name	40S ribosomal protein S14
Smed ID	SMED30024202
Length (bp)	569

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of 40S ribosomal protein S14 (SMED30024202) t-SNE clustered cells

Violin plots show distribution of expression levels for 40S ribosomal protein S14 (SMED30024202) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of 40S ribosomal protein S14 (SMED30024202) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for 40S ribosomal protein S14 (SMED30024202) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30024202

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 13

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
pharynx	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30024202	h1SMcG0013964	dd_Smed_v4_139_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
progenitor cell	SMED30024202	h1SMcG0013964	dd_Smed_v6_139_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018
neoblast	SMED30024202	h1SMcG0013964	dd_Smed_v6_139_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of 40S ribosomal protein S14 vs. Ensembl Human
Match: RPS14 (ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387])

HSP 1 Score: 204.912 bits (520), Expect = 1.280e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Human
Match: RPS14 (ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC:10387])

HSP 1 Score: 204.527 bits (519), Expect = 1.367e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

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BLAST of 40S ribosomal protein S14 vs. Ensembl Celegans
Match: rps-14 (40S ribosomal protein S14 [Source:UniProtKB/Swiss-Prot;Acc:P48150])

HSP 1 Score: 196.052 bits (497), Expect = 1.343e-64
Identity = 107/141 (75.89%), Postives = 122/141 (86.52%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQV-SLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA  RK   K E+ V SLGP+  EGE +FGV HIFASFNDTFVH+TD++G ET VRVTGGMKVKADRDESSPYAAMLAAQDVA+RCKQLGI A+H+++RATGGT+++TP P AQSALRALAR+GMKIGRIEDVTPIP D T
Sbjct:    1 MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCT 141

[Close]

Query:   77 MASKRKNVKKVEEQV-SLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA  RK   K E+ V SLGP+  EGE +FGV HIFASFNDTFVH+TD++G ET VRVTGGMKVKADRDESSPYAAMLAAQDVA+RCKQLGI A+H+++RATGGT+++TP P AQSALRALAR+GMKIGRIEDVTPIP D T
Sbjct:    1 MAPARKGKAKEEQAVVSLGPQAKEGELIFGVAHIFASFNDTFVHITDISGRETIVRVTGGMKVKADRDESSPYAAMLAAQDVADRCKQLGINALHIKLRATGGTRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPSDCT 141

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BLAST of 40S ribosomal protein S14 vs. Ensembl Fly
Match: RpS14a (gene:FBgn0004403 transcript:FBtr0071095)

HSP 1 Score: 195.282 bits (495), Expect = 3.321e-64
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++  V+K E QV LGP+V +GE VFGV HI+ASFNDTFVHVTD++G ET  RVTGGMKVKADRDE+SPYAAMLAAQDVAE+CK LGITA+H+++RATGG K++TP P AQSALRALARS MKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Fly
Match: RpS14a (gene:FBgn0004403 transcript:FBtr0071094)

HSP 1 Score: 195.282 bits (495), Expect = 3.321e-64
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++  V+K E QV LGP+V +GE VFGV HI+ASFNDTFVHVTD++G ET  RVTGGMKVKADRDE+SPYAAMLAAQDVAE+CK LGITA+H+++RATGG K++TP P AQSALRALARS MKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Fly
Match: RpS14b (gene:FBgn0004404 transcript:FBtr0071096)

HSP 1 Score: 195.282 bits (495), Expect = 3.321e-64
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++  V+K E QV LGP+V +GE VFGV HI+ASFNDTFVHVTD++G ET  RVTGGMKVKADRDE+SPYAAMLAAQDVAE+CK LGITA+H+++RATGG K++TP P AQSALRALARS MKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Fly
Match: RpS14b (gene:FBgn0004404 transcript:FBtr0345291)

HSP 1 Score: 195.282 bits (495), Expect = 3.321e-64
Identity = 105/140 (75.00%), Postives = 122/140 (87.14%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++  V+K E QV LGP+V +GE VFGV HI+ASFNDTFVHVTD++G ET  RVTGGMKVKADRDE+SPYAAMLAAQDVAE+CK LGITA+H+++RATGG K++TP P AQSALRALARS MKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKAKVQKEEVQVQLGPQVRDGEIVFGVAHIYASFNDTFVHVTDLSGRETIARVTGGMKVKADRDEASPYAAMLAAQDVAEKCKTLGITALHIKLRATGGNKTKTPGPGAQSALRALARSSMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Zebrafish
Match: rps14 (ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-030131-8631])

HSP 1 Score: 203.371 bits (516), Expect = 2.772e-67
Identity = 107/140 (76.43%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA++CK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Zebrafish
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040724-84])

HSP 1 Score: 48.1358 bits (113), Expect = 1.095e-6
Identity = 34/113 (30.09%), Postives = 58/113 (51.33%), Query Frame = 2

Query:  152 EVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHD 490
            E   + H+ A++N+T + VTD  G +  VR + G +   +  +S+P AA  A    A + +  G+T V V V+  G  +         SA++ L   G+++  I D TP+PH+
Sbjct:   86 EELPIAHVKATYNNTHIQVTDCAG-QYMVRTSCGTEGFKNVKKSTPIAAQTAGISAAAKARAKGVTYVRVLVKGLGPGR--------FSAIKGLTMGGLEVVSITDNTPVPHN 189

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BLAST of 40S ribosomal protein S14 vs. Ensembl Xenopus
Match: rps14 (ribosomal protein S14 [Source:NCBI gene;Acc:549476])

HSP 1 Score: 204.912 bits (520), Expect = 1.160e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Mouse
Match: Rps14 (ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:98107])

HSP 1 Score: 204.912 bits (520), Expect = 8.786e-68
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
Match: sp|P62264|RS14_MOUSE (40S ribosomal protein S14 OS=Mus musculus OX=10090 GN=Rps14 PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 6.146e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
Match: sp|P62263|RS14_HUMAN (40S ribosomal protein S14 OS=Homo sapiens OX=9606 GN=RPS14 PE=1 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 6.146e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
Match: sp|P62265|RS14_CRIGR (40S ribosomal protein S14 OS=Cricetulus griseus OX=10029 GN=RPS14 PE=2 SV=3)

HSP 1 Score: 204.912 bits (520), Expect = 6.146e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
Match: sp|P13471|RS14_RAT (40S ribosomal protein S14 OS=Rattus norvegicus OX=10116 GN=Rps14 PE=2 SV=3)

HSP 1 Score: 204.527 bits (519), Expect = 7.734e-67
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKDKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
Match: sp|P42036|RS143_ARATH (40S ribosomal protein S14-3 OS=Arabidopsis thaliana OX=3702 GN=RPS14C PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 5.572e-65
Identity = 107/138 (77.54%), Postives = 123/138 (89.13%), Query Frame = 2

Query:   83 SKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            SKRK  +   E V+LGP V EGE+VFGV H+FASFNDTF+HVTD++G ET VR+TGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+HV++RATGG K++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    2 SKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139

[Close]

BLAST of 40S ribosomal protein S14 vs. TrEMBL
Match: A0A5J4N870 (Small subunit ribosomal protein S14e (Fragment) OS=Paragonimus westermani OX=34504 GN=DEA37_0008179 PE=3 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 6.241e-70
Identity = 121/141 (85.82%), Postives = 131/141 (92.91%), Query Frame = 2

Query:   77 MASKRKNVKKV-EEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA+KRK  KKV EEQVSLGP+V EGE VFGVCHI+ASFNDTFVHVTD TGAET VRVTGGMKVKADRDESSPYAAMLAAQDVAE+CK LGI A+H+R+RATGGTK+RTPSPAAQSALRALARSGM+IGRIEDVTPIP D+T
Sbjct:    6 MAAKRKTAKKVVEEQVSLGPQVAEGEFVFGVCHIYASFNDTFVHVTDPTGAETIVRVTGGMKVKADRDESSPYAAMLAAQDVAEKCKLLGINALHIRIRATGGTKARTPSPAAQSALRALARSGMRIGRIEDVTPIPTDST 146

[Close]

BLAST of 40S ribosomal protein S14 vs. TrEMBL
Match: C1LW84 (40S ribosomal protein OS=Schistosoma japonicum OX=6182 GN=rps14 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 1.270e-69
Identity = 121/141 (85.82%), Postives = 130/141 (92.20%), Query Frame = 2

Query:   77 MASKRKNVKKV-EEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA+KRK  KKV EEQVSLGP+V EGE VFGVCHI+ASFNDTFVHVTD TGAET VRVTGGMKVKADRDESSPYAAMLAAQDVAE+CK LGI A+H+R+RATGGTK RTPSPAAQSALRALARSGM+IGRIEDVTPIP D+T
Sbjct:    1 MAAKRKGAKKVVEEQVSLGPQVAEGEFVFGVCHIYASFNDTFVHVTDATGAETIVRVTGGMKVKADRDESSPYAAMLAAQDVAEKCKALGINALHIRIRATGGTKVRTPSPAAQSALRALARSGMRIGRIEDVTPIPTDST 141

[Close]

BLAST of 40S ribosomal protein S14 vs. TrEMBL
Match: A0A183BFM2 (Uncharacterized protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS18007 PE=3 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 1.448e-69
Identity = 118/141 (83.69%), Postives = 131/141 (92.91%), Query Frame = 2

Query:   77 MASKRKNVKKV-EEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA+KRK  KKV EEQ+SLGP+V EGE VFG+CHI+ASFNDTFVHVTD TGAET VRVTGGMKVKADRDESSPYAAMLAAQDVAE+C+ LGI A+H+R+RATGGTK+RTPSPAAQSALRALARSGM+IGRIEDVTPIP D+T
Sbjct:    1 MAAKRKTAKKVVEEQISLGPQVAEGEXVFGICHIYASFNDTFVHVTDPTGAETIVRVTGGMKVKADRDESSPYAAMLAAQDVAEKCRLLGINALHIRIRATGGTKARTPSPAAQSALRALARSGMRIGRIEDVTPIPTDST 141

[Close]

BLAST of 40S ribosomal protein S14 vs. TrEMBL
Match: A0A183VVW2 (Uncharacterized protein OS=Trichobilharzia regenti OX=157069 GN=TRE_LOCUS4618 PE=3 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 1.989e-69
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 2

Query:   77 MASKRKNVKKV-EEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA+KRK  KKV EEQ+SLGP+V EGE VFGVCHI+ASFNDTFVHVTD TGAET VRVTGGMKVKADRDESSPYAAMLAAQDVAE+CK LGI A+H+R+RATGGTK RTPSPAAQSALRALARSGM+IGRIEDVTPIP D+T
Sbjct:    1 MAAKRKGAKKVVEEQISLGPQVAEGEFVFGVCHIYASFNDTFVHVTDATGAETIVRVTGGMKVKADRDESSPYAAMLAAQDVAEKCKTLGINALHIRIRATGGTKVRTPSPAAQSALRALARSGMRIGRIEDVTPIPTDST 141

[Close]

BLAST of 40S ribosomal protein S14 vs. TrEMBL
Match: A0A094ZQN1 (40S ribosomal protein S14 OS=Schistosoma haematobium OX=6185 GN=MS3_03577 PE=3 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 4.142e-69
Identity = 120/141 (85.11%), Postives = 130/141 (92.20%), Query Frame = 2

Query:   77 MASKRKNVKKV-EEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA+KRK  +KV EEQVSLGP+V EGE VFGVCHI+ASFNDTFVHVTD TGAET VRVTGGMKVKADRDESSPYAAMLAAQDVAE+CK LGI A+H+R+RATGGTK RTPSPAAQSALRALARSGM+IGRIEDVTPIP D+T
Sbjct:    1 MAAKRKGARKVVEEQVSLGPQVAEGEFVFGVCHIYASFNDTFVHVTDATGAETIVRVTGGMKVKADRDESSPYAAMLAAQDVAEKCKTLGINALHIRIRATGGTKVRTPSPAAQSALRALARSGMRIGRIEDVTPIPTDST 141

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Cavefish
Match: rps14 (ribosomal protein S14 [Source:NCBI gene;Acc:103026869])

HSP 1 Score: 204.912 bits (520), Expect = 6.900e-68
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Cavefish
Match: rps14 (ribosomal protein S14 [Source:NCBI gene;Acc:103026869])

HSP 1 Score: 172.555 bits (436), Expect = 1.090e-53
Identity = 78/103 (75.73%), Postives = 91/103 (88.35%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGT 385
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG 
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGN 103

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Cavefish
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:103047566])

HSP 1 Score: 48.1358 bits (113), Expect = 9.501e-7
Identity = 34/113 (30.09%), Postives = 59/113 (52.21%), Query Frame = 2

Query:  152 EVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHD 490
            E   + H+ A++N+T + VTD  G ++ VR + G +   +  +S+P AA  A    A + +  G+T   V V+  G  +         SA++ L+  G++I  I D TP+PH+
Sbjct:   91 EDLHIIHVKATYNNTHIQVTDNLG-QSMVRTSCGTEGFRNSKKSTPIAAQTAGISAASKAQAKGVTFARVLVKGLGPGR--------LSAIKGLSMGGLQIVSITDNTPVPHN 194

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Yeast
Match: RPS14A (Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14A has a paralog, RPS14B, that arose from the whole genome duplication [Source:SGD;Acc:S000000627])

HSP 1 Score: 169.088 bits (427), Expect = 6.445e-55
Identity = 88/118 (74.58%), Postives = 106/118 (89.83%), Query Frame = 2

Query:  143 EGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            +  +VFGV  I+ASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA +CK++GITAVHV++RATGGT+++TP P  Q+ALRALARSG++IGRIEDVTP+P D+T
Sbjct:    9 DNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 126

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Yeast
Match: RPS14B (Protein component of the small (40S) ribosomal subunit; required for ribosome assembly and 20S pre-rRNA processing; mutations confer cryptopleurine resistance; homologous to mammalian ribosomal protein S14 and bacterial S11; RPS14B has a paralog, RPS14A, that arose from the whole genome duplication [Source:SGD;Acc:S000003727])

HSP 1 Score: 169.088 bits (427), Expect = 7.026e-55
Identity = 88/118 (74.58%), Postives = 106/118 (89.83%), Query Frame = 2

Query:  143 EGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            +  +VFGV  I+ASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA +CK++GITAVHV++RATGGT+++TP P  Q+ALRALARSG++IGRIEDVTP+P D+T
Sbjct:   10 DNSQVFGVARIYASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAAKCKEVGITAVHVKIRATGGTRTKTPGPGGQAALRALARSGLRIGRIEDVTPVPSDST 127

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Nematostella
Match: EDO42012 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S2J5])

HSP 1 Score: 189.119 bits (479), Expect = 3.521e-62
Identity = 106/141 (75.18%), Postives = 123/141 (87.23%), Query Frame = 2

Query:   83 SKRKNVKKV--EEQVSLGPKVT-EGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            + RK  K+V  E+ +SLGP+V  EGE VFGV HIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDE+SPYAAMLAAQDVA RCK++GITA+H+++RATGG K++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    2 APRKGKKEVKEEQNISLGPQVVGEGELVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDEASPYAAMLAAQDVAARCKEIGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 142

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Nematostella
Match: EDO25642 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8DVW8])

HSP 1 Score: 55.8398 bits (133), Expect = 1.646e-10
Identity = 32/110 (29.09%), Postives = 54/110 (49.09%), Query Frame = 2

Query:  161 GVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHD 490
            G+ H+ ASFN+T + +TD  G       +GG   K  R +S+P+AA +A++       + GI  + V ++  G  +  +               G++I  I DVTP+PH+
Sbjct:   15 GIAHVHASFNNTIITITDRQGNALSWASSGGQGFKGSR-KSTPFAAQVASEVAGRAAIEQGIKNLDVEIKGPGPGRESSVRALGAL--------GIRITSIADVTPVPHN 115

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Medaka
Match: rps14 (ribosomal protein S14 [Source:NCBI gene;Acc:101157558])

HSP 1 Score: 204.912 bits (520), Expect = 6.857e-68
Identity = 108/140 (77.14%), Postives = 125/140 (89.29%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MA ++   KK E+ +SLGP+V EGE VFGVCHIFASFNDTFVHVTD++G ET  RVTGGMKVKADRDESSPYAAMLAAQDVA+RCK+LGITA+H+++RATGG +++TP P AQSALRALARSGMKIGRIEDVTPIP D+T
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Medaka
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:101169186])

HSP 1 Score: 46.595 bits (109), Expect = 2.763e-6
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 2

Query:  152 EVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHD 490
            E   + HI A++N+T + +TD  G ++ VR + G +   +  +S+P AA  A    A +    G+T V V V+  G  +         SA++ LA  G+++  I D TP+PH+
Sbjct:   82 EELPIVHIKATYNNTHIQLTDSEG-QSLVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATGKGVTFVRVVVKGIGPGRQ--------SAIKGLAMGGLEVVSITDNTPVPHN 185

[Close]

BLAST of 40S ribosomal protein S14 vs. Ensembl Medaka
Match: mrps11 (mitochondrial ribosomal protein S11 [Source:NCBI gene;Acc:101169186])

HSP 1 Score: 45.8246 bits (107), Expect = 7.177e-6
Identity = 35/113 (30.97%), Postives = 59/113 (52.21%), Query Frame = 2

Query:  152 EVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHD 490
            E   + HI A++N+T + +TD  G ++ VR + G +   +  +S+P AA  A    A +    G+T V V V+  G  +         SA++ LA  G+++  I D TP+PH+
Sbjct:  135 EELPIVHIKATYNNTHIQLTDSEG-QSLVRTSCGTEGFKNIKKSTPIAAQTAGISAAAKATGKGVTFVRVVVKGIGPGRQ--------SAIKGLAMGGLEVVSITDNTPVPHN 238

[Close]

BLAST of 40S ribosomal protein S14 vs. Planmine SMEST
Match: SMESG000036550.1 (SMESG000036550.1)

HSP 1 Score: 254.218 bits (648), Expect = 1.362e-87
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTPSPAAQSALRALARSGMKIGRIEDVTPIPHDTT
Sbjct:    1 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTKSRTPSPAAQSALRALARSGMKIGRIEDVTPIPHDTT 140

[Close]

BLAST of 40S ribosomal protein S14 vs. Planmine SMEST
Match: SMESG000003565.1 (SMESG000003565.1)

HSP 1 Score: 190.66 bits (483), Expect = 1.807e-62
Identity = 102/141 (72.34%), Postives = 122/141 (86.52%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTK-SRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            MAS+++ VK V E  +LGPK+ +GEE FG+CHI+A  NDTF+HVTDVTGAETFV+VTGGMKVKADRDE SPYAAMLA+QDVA++CK LGITAVHV +R  GG K S  PSPAA +A+RALAR+G+KIGRIE+VTP+PHDTT
Sbjct:    1 MASRKRTVKAVNEVTTLGPKLVDGEENFGLCHIYAGKNDTFIHVTDVTGAETFVKVTGGMKVKADRDEPSPYAAMLASQDVADKCKALGITAVHVEIRGGGGLKRSPAPSPAASTAMRALARAGLKIGRIENVTPVPHDTT 141

[Close]

BLAST of 40S ribosomal protein S14 vs. Planmine SMEST
Match: SMESG000003564.1 (SMESG000003564.1)

HSP 1 Score: 189.119 bits (479), Expect = 9.413e-62
Identity = 101/141 (71.63%), Postives = 121/141 (85.82%), Query Frame = 2

Query:   77 MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGAETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRATGGTK-SRTXXXXXXXXXXXXXXSGMKIGRIEDVTPIPHDTT 496
            M S+++ VK V E  +LGPK+ +GEE FG+CHI+A  NDTF+HVTDVTGAETFV+VTGGMKVKADRDE SPYAAMLA+QDVA++CK LGITAVHV +R  GG K S  PSPAA +A+RALAR+G+KIGRIE+VTP+PHDTT
Sbjct:    1 MTSRKRTVKAVNEVTTLGPKLVDGEENFGLCHIYAGKNDTFIHVTDVTGAETFVKVTGGMKVKADRDEPSPYAAMLASQDVADKCKALGITAVHVEIRGGGGLKRSPAPSPAASTAMRALARAGLKIGRIENVTPVPHDTT 141

The following BLAST results are available for this feature:

BLAST of 40S ribosomal protein S14 vs. Ensembl Human
BLAST of 40S ribosomal protein S14 vs. Ensembl Celegans
BLAST of 40S ribosomal protein S14 vs. Ensembl Fly
BLAST of 40S ribosomal protein S14 vs. Ensembl Zebrafish
BLAST of 40S ribosomal protein S14 vs. Ensembl Xenopus
BLAST of 40S ribosomal protein S14 vs. Ensembl Mouse
BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
BLAST of 40S ribosomal protein S14 vs. TrEMBL
BLAST of 40S ribosomal protein S14 vs. Ensembl Cavefish
BLAST of 40S ribosomal protein S14 vs. Ensembl Sea Lamprey
BLAST of 40S ribosomal protein S14 vs. Ensembl Yeast
BLAST of 40S ribosomal protein S14 vs. Ensembl Nematostella
BLAST of 40S ribosomal protein S14 vs. Ensembl Medaka
BLAST of 40S ribosomal protein S14 vs. Planmine SMEST

BLAST of 40S ribosomal protein S14 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RPS14	1.280e-67	77.14	ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC...	[more]
RPS14	1.280e-67	77.14	ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC...	[more]
RPS14	1.280e-67	77.14	ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC...	[more]
RPS14	1.280e-67	77.14	ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC...	[more]
RPS14	1.367e-67	77.14	ribosomal protein S14 [Source:HGNC Symbol;Acc:HGNC...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 2


Match Name	E-value	Identity	Description
rps-14	1.343e-64	75.89	40S ribosomal protein S14 [Source:UniProtKB/Swiss...	[more]
rps-14	1.343e-64	75.89	40S ribosomal protein S14 [Source:UniProtKB/Swiss...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 4


Match Name	E-value	Identity	Description
RpS14a	3.321e-64	75.00	gene:FBgn0004403 transcript:FBtr0071095	[more]
RpS14a	3.321e-64	75.00	gene:FBgn0004403 transcript:FBtr0071094	[more]
RpS14b	3.321e-64	75.00	gene:FBgn0004404 transcript:FBtr0071096	[more]
RpS14b	3.321e-64	75.00	gene:FBgn0004404 transcript:FBtr0345291	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 2


Match Name	E-value	Identity	Description
rps14	2.772e-67	76.43	ribosomal protein S14 [Source:ZFIN;Acc:ZDB-GENE-03...	[more]
mrps11	1.095e-6	30.09	mitochondrial ribosomal protein S11 [Source:ZFIN;A...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 1


Match Name	E-value	Identity	Description
rps14	1.160e-67	77.14	ribosomal protein S14 [Source:NCBI gene;Acc:549476...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rps14	8.786e-68	77.14	ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:9...	[more]
Rps14	8.786e-68	77.14	ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:9...	[more]
Rps14	8.786e-68	77.14	ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:9...	[more]
Rps14	8.786e-68	77.14	ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:9...	[more]
Rps14	8.786e-68	77.14	ribosomal protein S14 [Source:MGI Symbol;Acc:MGI:9...	[more]

BLAST of 40S ribosomal protein S14 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P62264\|RS14_MOUSE	6.146e-67	77.14	40S ribosomal protein S14 OS=Mus musculus OX=10090...	[more]
sp\|P62263\|RS14_HUMAN	6.146e-67	77.14	40S ribosomal protein S14 OS=Homo sapiens OX=9606 ...	[more]
sp\|P62265\|RS14_CRIGR	6.146e-67	77.14	40S ribosomal protein S14 OS=Cricetulus griseus OX...	[more]
sp\|P13471\|RS14_RAT	7.734e-67	77.14	40S ribosomal protein S14 OS=Rattus norvegicus OX=...	[more]
sp\|P42036\|RS143_ARATH	5.572e-65	77.54	40S ribosomal protein S14-3 OS=Arabidopsis thalian...	[more]

BLAST of 40S ribosomal protein S14 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A5J4N870	6.241e-70	85.82	Small subunit ribosomal protein S14e (Fragment) OS...	[more]
C1LW84	1.270e-69	85.82	40S ribosomal protein OS=Schistosoma japonicum OX=...	[more]
A0A183BFM2	1.448e-69	83.69	Uncharacterized protein OS=Echinostoma caproni OX=...	[more]
A0A183VVW2	1.989e-69	85.11	Uncharacterized protein OS=Trichobilharzia regenti...	[more]
A0A094ZQN1	4.142e-69	85.11	40S ribosomal protein S14 OS=Schistosoma haematobi...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 3


Match Name	E-value	Identity	Description
rps14	6.900e-68	77.14	ribosomal protein S14 [Source:NCBI gene;Acc:103026...	[more]
rps14	1.090e-53	75.73	ribosomal protein S14 [Source:NCBI gene;Acc:103026...	[more]
mrps11	9.501e-7	30.09	mitochondrial ribosomal protein S11 [Source:NCBI g...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of 40S ribosomal protein S14 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 2


Match Name	E-value	Identity	Description
RPS14A	6.445e-55	74.58	Protein component of the small (40S) ribosomal sub...	[more]
RPS14B	7.026e-55	74.58	Protein component of the small (40S) ribosomal sub...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 2


Match Name	E-value	Identity	Description
EDO42012	3.521e-62	75.18	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO25642	1.646e-10	29.09	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A8...	[more]

BLAST of 40S ribosomal protein S14 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 3


Match Name	E-value	Identity	Description
rps14	6.857e-68	77.14	ribosomal protein S14 [Source:NCBI gene;Acc:101157...	[more]
mrps11	2.763e-6	30.97	mitochondrial ribosomal protein S11 [Source:NCBI g...	[more]
mrps11	7.177e-6	30.97	mitochondrial ribosomal protein S11 [Source:NCBI g...	[more]

BLAST of 40S ribosomal protein S14 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 3


Match Name	E-value	Identity	Description
SMESG000036550.1	1.362e-87	100.00	SMESG000036550.1	[more]
SMESG000003565.1	1.807e-62	72.34	SMESG000003565.1	[more]
SMESG000003564.1	9.413e-62	71.63	SMESG000003564.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30024202 ID=SMED30024202|Name=40S ribosomal protein S14|organism=Schmidtea mediterranea sexual|type=transcript|length=569bp
ATTTATATTTCCATAAACGATTACATAAGCAATTGTTTAAATTATTATTT
GCTGTTAACTAAATCAAATTTAAATAATGGCTTCTAAAAGAAAGAATGTC
AAAAAAGTCGAAGAGCAAGTTTCGCTTGGACCAAAGGTAACTGAAGGAGA
AGAAGTTTTTGGTGTTTGTCATATTTTTGCGTCTTTCAATGATACTTTTG
TTCATGTTACTGATGTTACTGGAGCAGAAACTTTTGTCCGGGTTACAGGA
GGTATGAAAGTCAAAGCAGACAGAGATGAAAGTTCTCCTTATGCTGCTAT
GCTTGCAGCTCAAGACGTTGCTGAGCGATGCAAACAGTTAGGAATAACTG
CTGTTCACGTTAGAGTTCGTGCTACTGGTGGTACTAAATCACGAACACCA
AGTCCCGCTGCACAATCTGCACTTCGTGCTCTTGCAAGAAGCGGTATGAA
AATTGGAAGAATAGAAGATGTGACTCCTATTCCTCATGATACAACCAGAA
GAAAAGGAGGTAGAAGAGGTCGTAGATTGTAGTTTTAAAATAAATATTTG
GATGTAAAAAAAAAGATCG

protein sequence of SMED30024202-orf-1

>SMED30024202-orf-1 ID=SMED30024202-orf-1|Name=SMED30024202-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=152bp
MASKRKNVKKVEEQVSLGPKVTEGEEVFGVCHIFASFNDTFVHVTDVTGA
ETFVRVTGGMKVKADRDESSPYAAMLAAQDVAERCKQLGITAVHVRVRAT
GGTKSRTPSPAAQSALRALARSGMKIGRIEDVTPIPHDTTRRKGGRRGRR
L*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000120	progenitor cell
PLANA:0000429	neoblast
PLANA:0002032	epidermal cell
PLANA:0003116	parenchymal cell

Vocabulary: **INTERPRO**
Term	Definition
IPR036967	Ribosomal_S11_sf
IPR001971	Ribosomal_S11
IPR018102	Ribosomal_S11_CS

Vocabulary: **molecular function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **biological process**
Term	Definition
GO:0006412	translation

Vocabulary: **cellular component**
Term	Definition
GO:0005840	ribosome
GO:0030529	intracellular ribonucleoprotein complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036967	Ribosomal protein S11 superfamily	GENE3D	G3DSA:3.30.420.80		coord: 1..151 e-value: 1.7E-79 score: 266.7
IPR001971	Ribosomal protein S11	PIRSF	PIRSF002131	RPS11p_RPS11a_RPS14e_RPS11o	coord: 1..148 e-value: 7.1E-38 score: 127.2
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 29..147 e-value: 4.3E-46 score: 155.8
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 3..151
None	No IPR available	PANTHER	PTHR11759:SF28		coord: 3..151
None	No IPR available	SUPERFAMILY	SSF53137	Translational machinery components	coord: 24..149
IPR018102	Ribosomal S11, conserved site	PROSITE	PS00054	RIBOSOMAL_S11	coord: 116..138

Main menu

40S ribosomal protein S14

Zeng et. al., 2018

▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Davies et. al., 2017

PAGE et. al., 2020

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 13

Owlery

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