Ubiquitin-40S ribosomal protein S27a

Overview


Name	Ubiquitin-40S ribosomal protein S27a
Smed ID	SMED30024115
Length (bp)	573

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Ubiquitin-40S ribosomal protein S27a (SMED30024115) t-SNE clustered cells

Violin plots show distribution of expression levels for Ubiquitin-40S ribosomal protein S27a (SMED30024115) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Ubiquitin-40S ribosomal protein S27a (SMED30024115) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Ubiquitin-40S ribosomal protein S27a (SMED30024115) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30024115

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 17

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
X1 cell	SMED30024115	h1SMcG0016320	SmedASXL_043133	SmedAsxl_ww_GCZZ01	PMID:26114597 Zhu et al., 2015
pharynx	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
protonephridia	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
nervous system	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cephalic ganglia	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
non-ciliated neuron	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
cilated neuron	SMED30024115	h1SMcG0016320	dd_Smed_v4_121_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30024115	h1SMcG0016320	Contig44371	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30024115	h1SMcG0016320	Contig44371	newmark_ests	PMID:29674431 Fincher et al., 2018
gut	SMED30024115	h1SMcG0016320	DN303026	smed_ncbi_20240424	PMID:16344473 Zayas et al., 2005
central nervous system	SMED30024115	h1SMcG0016320	DN303026	smed_ncbi_20240424	PMID:16344473 Zayas et al., 2005
testis	SMED30024115	h1SMcG0016320	DN303026	smed_ncbi_20240424	PMID:16344473 Zayas et al., 2005
neoblast	SMED30024115	h1SMcG0016320	dd_Smed_v6_121_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Human
Match: RPS27A (ribosomal protein S27a [Source:HGNC Symbol;Acc:HGNC:10417])

HSP 1 Score: 194.126 bits (492), Expect = 2.497e-63
Identity = 137/155 (88.39%), Postives = 143/155 (92.26%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

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BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Human
Match: AL136454.1 (novel protein similar to ribosomal protein S27a RPS27A)

HSP 1 Score: 182.185 bits (461), Expect = 1.094e-58
Identity = 131/155 (84.52%), Postives = 140/155 (90.32%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTL GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTP+K KHK+KKVKLA+LKYYKVD NGKI  L +ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLMGKTITLEVELSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPRKNKHKRKKVKLALLKYYKVDENGKISCLHRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTL GKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTP+K KHK+KKVKLA+LKYYKVD NGKI  L +ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLMGKTITLEVELSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPRKNKHKRKKVKLALLKYYKVDENGKISCLHRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

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BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Celegans
Match: ubq-2 (Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ribosomal protein L40 [Source:UniProtKB/Swiss-Prot;Acc:P49632])

HSP 1 Score: 130.954 bits (328), Expect = 3.043e-39
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

HSP 6 Score: 129.028 bits (323), Expect = 5.849e-35
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTL GKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445

HSP 7 Score: 95.5153 bits (236), Expect = 5.638e-23
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAG 217
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 130.954 bits (328), Expect = 9.746e-36
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

HSP 6 Score: 129.028 bits (323), Expect = 5.849e-35
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTL GKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445

HSP 7 Score: 95.5153 bits (236), Expect = 5.638e-23
Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAG 217
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

HSP 6 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521

HSP 7 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597

HSP 8 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 673

HSP 9 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 749

HSP 10 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 825

HSP 11 Score: 129.028 bits (323), Expect = 1.387e-34
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTL GKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Celegans
Match: ubq-1 (Polyubiquitin-A Ubiquitin Ubiquitin-related [Source:UniProtKB/Swiss-Prot;Acc:P0CG71])

HSP 1 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

HSP 6 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  457 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521

HSP 7 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  533 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 597

HSP 8 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  609 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 673

HSP 9 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  685 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 749

HSP 10 Score: 131.339 bits (329), Expect = 2.505e-35
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  761 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 825

HSP 11 Score: 129.028 bits (323), Expect = 1.387e-34
Identity = 63/65 (96.92%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTL GKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  381 MQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
Match: RpS27A (gene:FBgn0003942 transcript:FBtr0080016)

HSP 1 Score: 189.504 bits (480), Expect = 8.405e-62
Identity = 136/155 (87.74%), Postives = 142/155 (91.61%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKKNY+TPKKIKHK+KKVKLAVLKYYKVD NGKI RLR+ECP E+CG GVFMAAH DR YCGKC LT++ S   E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYSTPKKIKHKRKKVKLAVLKYYKVDENGKIHRLRRECPGENCGAGVFMAAHEDRHYCGKCNLTFVFSKPEE 155

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0334787)

HSP 1 Score: 129.413 bits (324), Expect = 1.250e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
Match: RpL40 (gene:FBgn0003941 transcript:FBtr0077470)

HSP 1 Score: 129.413 bits (324), Expect = 1.250e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
Match: CG11700 (gene:FBgn0029856 transcript:FBtr0333520)

HSP 1 Score: 125.946 bits (315), Expect = 3.195e-35
Identity = 61/65 (93.85%), Postives = 63/65 (96.92%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SD+IENVKA+I DKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDSIENVKARIHDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 2 Score: 120.553 bits (301), Expect = 3.145e-33
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTI++VKA+I DK+GIPPD QRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIKHVKARIHDKDGIPPDHQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 3 Score: 114.775 bits (286), Expect = 6.262e-31
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE  PP+ QRLIF GK LE+GRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 65

HSP 4 Score: 114.775 bits (286), Expect = 6.262e-31
Identity = 57/65 (87.69%), Postives = 59/65 (90.77%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKE  PP+ QRLIF GK LE+GRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEENPPEHQRLIFGGKHLENGRTLSDYNIQKES 141

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
Match: Ubi-p5E (gene:FBgn0086558 transcript:FBtr0345892)

HSP 1 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

HSP 6 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445

HSP 7 Score: 129.798 bits (325), Expect = 4.112e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Zebrafish
Match: rps27a (ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-030131-10018])

HSP 1 Score: 193.741 bits (491), Expect = 2.158e-63
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP + CG GVFMA+HFDR YCGKCCLTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLTY 148

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP + CG GVFMA+HFDR YCGKCCLTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLTY 148

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP + CG GVFMA+HFDR YCGKCCLTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLTY 148

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Zebrafish
Match: ubb (ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10])

HSP 1 Score: 129.413 bits (324), Expect = 5.185e-39
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Zebrafish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:ZFIN;Acc:ZDB-GENE-051023-7])

HSP 1 Score: 129.798 bits (325), Expect = 1.522e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 194.126 bits (492), Expect = 2.264e-63
Identity = 137/155 (88.39%), Postives = 143/155 (92.26%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 129.798 bits (325), Expect = 2.340e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:448705])

HSP 1 Score: 125.946 bits (315), Expect = 1.499e-37
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 265
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
Match: ENSXETT00000033679.1 (ubiquitin C [Source:NCBI gene;Acc:448120])

HSP 1 Score: 129.798 bits (325), Expect = 4.014e-37
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 129.798 bits (325), Expect = 4.014e-37
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 129.798 bits (325), Expect = 4.014e-37
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:548926])

HSP 1 Score: 125.946 bits (315), Expect = 1.076e-36
Identity = 104/121 (85.95%), Postives = 110/121 (90.91%), Query Frame = 2

Query:  179 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:   28 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 147

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Mouse
Match: Rps27a (ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:1925544])

HSP 1 Score: 192.2 bits (487), Expect = 9.858e-63
Identity = 136/155 (87.74%), Postives = 142/155 (91.61%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFM +HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCF-NKPE 154

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFM +HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMGSHFDRHYCGKCCLTYCF-NKPE 154

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Mouse
Match: Gm8797 (predicted pseudogene 8797 [Source:MGI Symbol;Acc:MGI:3643769])

HSP 1 Score: 129.413 bits (324), Expect = 5.398e-39
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Mouse
Match: Uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:MGI Symbol;Acc:MGI:98887])

HSP 1 Score: 128.642 bits (322), Expect = 1.439e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Mouse
Match: Gm11808 (predicted gene 11808 [Source:MGI Symbol;Acc:MGI:3649356])

HSP 1 Score: 129.798 bits (325), Expect = 1.772e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
Match: sp|P79781|RS27A_CHICK (Ubiquitin-40S ribosomal protein S27a OS=Gallus gallus OX=9031 GN=RPS27A PE=2 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 3.487e-63
Identity = 135/148 (91.22%), Postives = 140/148 (94.59%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP+E CG GVFMA+HFDR YCGKCCLTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSEECGAGVFMASHFDRHYCGKCCLTY 148

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
Match: sp|P62979|RS27A_HUMAN (Ubiquitin-40S ribosomal protein S27a OS=Homo sapiens OX=9606 GN=RPS27A PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 1.199e-62
Identity = 137/155 (88.39%), Postives = 143/155 (92.26%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
Match: sp|P62978|RS27A_CAVPO (Ubiquitin-40S ribosomal protein S27a OS=Cavia porcellus OX=10141 GN=RPS27A PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 1.199e-62
Identity = 137/155 (88.39%), Postives = 143/155 (92.26%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
Match: sp|P62992|RS27A_BOVIN (Ubiquitin-40S ribosomal protein S27a OS=Bos taurus OX=9913 GN=RPS27A PE=1 SV=2)

HSP 1 Score: 194.126 bits (492), Expect = 1.199e-62
Identity = 137/155 (88.39%), Postives = 143/155 (92.26%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP++ CG GVFMA+HFDR YCGKCCLTY   NK E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSDECGAGVFMASHFDRHYCGKCCLTYCF-NKPE 154

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
Match: sp|P68200|RS27A_ICTPU (Ubiquitin-40S ribosomal protein S27a OS=Ictalurus punctatus OX=7998 GN=rps27a PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.629e-62
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP + CG GVFMA+HFDR YCGKCCLTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLTY 148

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
Match: A0A099ZB74 (Ubiquitin-40S ribosomal protein S27a (Fragment) OS=Tinamus guttatus OX=94827 GN=N309_10738 PE=4 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 1.028e-61
Identity = 136/148 (91.89%), Postives = 141/148 (95.27%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP+E CG GVFMA+HFDR YCGKCCLTY
Sbjct:    3 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKISRLRRECPSEECGAGVFMASHFDRHYCGKCCLTY 150

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
Match: A0A507ESF6 (Ubiquitin-like domain-containing protein OS=Spizellomyces sp. 'palustris' OX=117820 GN=SpCBS45565_g04583 PE=4 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 1.836e-61
Identity = 136/153 (88.89%), Postives = 143/153 (93.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNK 535
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK YTTPKKIKHK KKVKLA+LKYYKVD +GK+ RLR+ECPNE+CG GVFMA HFDRQYCG+C LTY+ S K
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKTYTTPKKIKHKHKKVKLAILKYYKVDDDGKVTRLRRECPNETCGAGVFMAMHFDRQYCGRCGLTYIFSKK 153

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
Match: A0A0L0HSX0 (Ubiquitin-40S ribosomal protein S27a OS=Spizellomyces punctatus (strain DAOM BR117) OX=645134 GN=SPPG_01636 PE=4 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.048e-61
Identity = 136/153 (88.89%), Postives = 143/153 (93.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNK 535
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK YTTPKKIKHK KKVKLA+LKYYKVD +GK+ RLR+ECPNE+CG GVFMA HFDRQYCG+C LTY+ S K
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKTYTTPKKIKHKHKKVKLAILKYYKVDDDGKVTRLRRECPNETCGAGVFMAMHFDRQYCGRCGLTYIFSKK 153

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
Match: A0A507EDP5 (Ubiquitin-like domain-containing protein OS=Powellomyces hirtus OX=109895 GN=PhCBS80983_g00453 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.172e-61
Identity = 136/151 (90.07%), Postives = 142/151 (94.04%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHS 529
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK YTTPKKI+HK KKVKLAVLKYYKVD +GKI RLR+ECPNE+CG G+FMA HFDRQYCGKC LTY+ S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKTYTTPKKIRHKHKKVKLAVLKYYKVDDDGKITRLRRECPNETCGAGIFMAMHFDRQYCGKCGLTYIFS 151

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
Match: A0A507DVW0 (Ubiquitin-like domain-containing protein OS=Powellomyces hirtus OX=109895 GN=PhCBS80983_g04943 PE=4 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.462e-61
Identity = 136/151 (90.07%), Postives = 142/151 (94.04%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHS 529
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK YTTPKKI+HK KKVKLAVLKYYKVD +GKI RLR+ECPNE+CG G+FMA HFDRQYCGKC LTY+ S
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKTYTTPKKIRHKHKKVKLAVLKYYKVDDDGKITRLRRECPNETCGAGIFMAMHFDRQYCGKCGLTYIFS 151

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Cavefish
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:103044043])

HSP 1 Score: 193.741 bits (491), Expect = 1.829e-63
Identity = 134/148 (90.54%), Postives = 139/148 (93.92%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP + CG GVFMA+HFDR YCGKCCLTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCCLTY 148

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Cavefish
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:103027541])

HSP 1 Score: 129.798 bits (325), Expect = 1.290e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Cavefish
Match: si:ch211-202a12.4 (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 129.028 bits (323), Expect = 1.427e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   84 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 148

HSP 2 Score: 129.028 bits (323), Expect = 1.427e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  160 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 224

HSP 3 Score: 116.316 bits (290), Expect = 9.505e-31
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 2

Query:   92 KTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            K LTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  317 KDLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 376

HSP 4 Score: 93.5893 bits (231), Expect = 2.136e-22
Identity = 45/45 (100.00%), Postives = 45/45 (100.00%), Query Frame = 2

Query:  137 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   28 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 72

HSP 5 Score: 81.2629 bits (199), Expect = 5.874e-18
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRL 205
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQ +
Sbjct:  236 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQEV 278

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Cavefish
Match: nedd8l (NEDD8-like [Source:NCBI gene;Acc:103044361])

HSP 1 Score: 78.5666 bits (192), Expect = 3.376e-19
Identity = 35/62 (56.45%), Postives = 49/62 (79.03%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQ 262
            M I VKTLTGK I +++E +D +E +K ++++KEGIPP QQRLI++GKQ+ D +T SDY IQ
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVERIKERVEEKEGIPPQQQRLIYSGKQMNDEKTASDYKIQ 62

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
Match: UBB (ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463])

HSP 1 Score: 129.413 bits (324), Expect = 2.651e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   14 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 78

HSP 2 Score: 129.413 bits (324), Expect = 2.651e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   90 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 154

HSP 3 Score: 129.413 bits (324), Expect = 2.651e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  166 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 230

HSP 4 Score: 129.413 bits (324), Expect = 2.651e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  242 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 306

HSP 5 Score: 129.413 bits (324), Expect = 2.651e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  318 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 382

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
Match: ENSPMAT00000007011.1 (pep scaffold:Pmarinus_7.0:GL484716:14406:16135:-1 gene:ENSPMAG00000006335.1 transcript:ENSPMAT00000007011.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 121.324 bits (303), Expect = 3.966e-36
Identity = 102/121 (84.30%), Postives = 109/121 (90.08%), Query Frame = 2

Query:  179 GIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            GIPPDQQR IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP+E CG GVFMA HF+RQYCGKCCLTY+ +   E
Sbjct:    1 GIPPDQQR-IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKITRLRRECPSEECGAGVFMANHFNRQYCGKCCLTYVFNKPEE 120

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006254.1 (pep scaffold:Pmarinus_7.0:GL477433:3744:20801:-1 gene:ENSPMAG00000005642.1 transcript:ENSPMAT00000006254.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 61.2326 bits (147), Expect = 1.018e-11
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            +QIFV    G T T +V  SD ++ +K KI  +EG+PP +Q L F  +QLE  RTL  YNI+ +S
Sbjct:    1 VQIFVVNFQGSTRTYDVSLSDRVQQLKVKIHREEGVPPREQILTFESQQLEGERTLRSYNIRAQS 65

HSP 2 Score: 58.5362 bits (140), Expect = 9.126e-11
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            +FVKTL  KT+T+EV+ S+++ ++K K+  K GI  +QQ L F    LED + L  Y IQ+ S
Sbjct:  154 VFVKTLANKTLTIEVKLSNSVLSLKQKVHQKAGIAVNQQILTFGSHTLEDDQKLESYGIQQHS 216

HSP 3 Score: 58.5362 bits (140), Expect = 9.126e-11
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            +FVKTL  KT+T+EV+ S+++ ++K K+  K GI  +QQ L F    LED + L  Y IQ+ S
Sbjct:  305 VFVKTLANKTLTIEVKLSNSVLSLKQKVHQKAGIAVNQQILTFGSHTLEDDQKLESYGIQQHS 367

HSP 4 Score: 55.4546 bits (132), Expect = 1.010e-9
Identity = 27/64 (42.19%), Postives = 42/64 (65.62%), Query Frame = 2

Query:   80 QIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            Q+ VK L GK++ L V+ S+T+  +KA+IQ K  + P QQRL + G  L+DG TL+   +++ S
Sbjct:  229 QVVVKDLEGKSLRLMVKLSETVLELKARIQSKWKVSPAQQRLAYGGTALQDGTTLAKCGLKQNS 292

HSP 5 Score: 50.8322 bits (120), Expect = 3.671e-8
Identity = 25/63 (39.68%), Postives = 40/63 (63.49%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            I VK L G ++ L V+ S+++  +KA+IQ K  + P QQRL + G  L+DG TL+   +++ S
Sbjct:   79 IVVKDLEGNSLRLMVKLSESVLELKARIQSKWKVSPAQQRLAYGGTALQDGTTLAKCGLKQNS 141

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
Match: ENSPMAT00000006261.1 (pep scaffold:Pmarinus_7.0:GL477433:28222:29567:1 gene:ENSPMAG00000005664.1 transcript:ENSPMAT00000006261.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 58.9214 bits (141), Expect = 1.049e-11
Identity = 28/63 (44.44%), Postives = 41/63 (65.08%), Query Frame = 2

Query:   83 IFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            +FVKTL  KT+T+EV+ S+++ ++K K+  K GI  +QQ L F    LED + L  Y IQ+ S
Sbjct:   78 VFVKTLANKTLTIEVKLSNSVLSLKQKVHQKAGIAVNQQILTFGSHTLEDDQKLESYGIQQHS 140

HSP 2 Score: 51.2174 bits (121), Expect = 6.017e-9
Identity = 25/65 (38.46%), Postives = 40/65 (61.54%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            +QI VK L G ++ L    S+++  +KA+IQ K  + P QQRL + G  L+DG TL+   +++ S
Sbjct:    1 VQIVVKDLEGNSLRLMANLSESVLELKARIQSKWKVSPAQQRLAYGGTALQDGTTLAKCGLKQNS 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
Match: zfand4 (zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZDB-GENE-090312-102])

HSP 1 Score: 55.0694 bits (131), Expect = 1.845e-9
Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 259
            M++ ++TLTG    + V   +++ +VKAKIQ  EGIP  QQ LI+   +LED   L DY+I
Sbjct:   28 MEVLIETLTGTFFEIRVSPFESVMSVKAKIQRLEGIPITQQHLIWRNIELEDDYCLHDYHI 88

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
Match: RPS31 (Fusion protein cleaved to yield ribosomal protein S31 and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B; homologous to mammalian ribosomal protein S27A, no bacterial homolog [Source:SGD;Acc:S000004157])

HSP 1 Score: 172.17 bits (435), Expect = 7.085e-56
Identity = 126/148 (85.14%), Postives = 134/148 (90.54%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKK YTTPKKIKHK KKVKLAVL YYKVD+ GK+ +LR+EC N +CG GVF+A H DR YCGKC   Y
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKVYTTPKKIKHKHKKVKLAVLSYYKVDAEGKVTKLRRECSNPTCGAGVFLANHKDRLYCGKCHSVY 148

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
Match: RPL40B (Ubiquitin-ribosomal 60S subunit protein L40B fusion protein; cleaved to yield ubiquitin and ribosomal protein L40B; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40B has a paralog, RPL40A, that arose from the whole genome duplication [Source:SGD;Acc:S000001802])

HSP 1 Score: 129.028 bits (323), Expect = 2.881e-39
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
Match: RPL40A (Ubiquitin-ribosomal 60S subunit protein L40A fusion protein; cleaved to yield ubiquitin and ribosomal protein L40A; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; homologous to mammalian ribosomal protein L40, no bacterial homolog; RPL40A has a paralog, RPL40B, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001410])

HSP 1 Score: 129.028 bits (323), Expect = 2.881e-39
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
Match: UBI4 (Ubiquitin; becomes conjugated to proteins, marking them for selective degradation via the ubiquitin-26S proteasome system; essential for the cellular stress response; encoded as a polyubiquitin precursor comprised of 5 head-to-tail repeats; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003962])

HSP 1 Score: 129.413 bits (324), Expect = 9.776e-37
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 129.413 bits (324), Expect = 9.776e-37
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 129.413 bits (324), Expect = 9.776e-37
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 129.413 bits (324), Expect = 9.776e-37
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 129.413 bits (324), Expect = 9.776e-37
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
Match: RUB1 (Ubiquitin-like protein with similarity to mammalian NEDD8; conjugation (neddylation) substrates include the cullins Cdc53p, Rtt101p, and Cul3p; activated by Ula1p and Uba3p (E1 enzyme pair); conjugation mediated by Ubc12p (E2 enzyme) [Source:SGD;Acc:S000002546])

HSP 1 Score: 68.5514 bits (166), Expect = 2.302e-16
Identity = 31/61 (50.82%), Postives = 48/61 (78.69%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 259
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T++D ++
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHL 61

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
Match: EDO48503 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RJ25])

HSP 1 Score: 201.445 bits (511), Expect = 7.187e-67
Identity = 142/155 (91.61%), Postives = 146/155 (94.19%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVD NGKI RLR+ECP+ESCG GVFMA+HFDRQYCGKCCLTY+ S   E
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDENGKITRLRRECPSESCGAGVFMASHFDRQYCGKCCLTYVFSKPQE 155

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
Match: EDO45561 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7RSG9])

HSP 1 Score: 130.183 bits (326), Expect = 4.666e-39
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 73.1738 bits (178), Expect = 6.527e-17
Identity = 37/65 (56.92%), Postives = 51/65 (78.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQI VK    KT TL+VE+SDT+E+VK KIQ++EGIPP  QRL++  ++L D R+L+DYNI++ S
Sbjct:   77 MQISVKA-HWKTFTLDVEASDTVESVKEKIQNREGIPPKVQRLLYEEEELVDNRSLADYNIKQGS 140

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
Match: EDO31255 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SYF9])

HSP 1 Score: 126.716 bits (317), Expect = 1.665e-38
Identity = 62/63 (98.41%), Postives = 62/63 (98.41%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 265
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
Match: EDO32403 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SV54])

HSP 1 Score: 129.413 bits (324), Expect = 1.141e-37
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 129.413 bits (324), Expect = 1.141e-37
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 127.872 bits (320), Expect = 4.154e-37
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQR IFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRFIFAGKQLEDGRTLSDYNIQKES 217

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
Match: EDO32547 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7SUP6])

HSP 1 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

HSP 4 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 293

HSP 5 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369

HSP 6 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 445

HSP 7 Score: 129.413 bits (324), Expect = 1.727e-35
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 521

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 189.889 bits (481), Expect = 5.563e-62
Identity = 133/148 (89.86%), Postives = 138/148 (93.24%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG KKRKKK+YTTPKK KHK+KKVKLAVLKYYKVD NGKI RLR+ECP + CG GVFMA+HFDR YCGKC LTY
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGAKKRKKKSYTTPKKNKHKRKKVKLAVLKYYKVDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCTLTY 148

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
Match: uba52 (ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:NCBI gene;Acc:101169681])

HSP 1 Score: 130.954 bits (328), Expect = 4.816e-39
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE+SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
Match: ENSORLT00000015052.2 (pep primary_assembly:ASM223467v1:12:2267197:2268484:1 gene:ENSORLG00000012019.2 transcript:ENSORLT00000015052.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 129.798 bits (325), Expect = 1.292e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
Match: ENSORLT00000001484.2 (pep primary_assembly:ASM223467v1:12:2266741:2269204:1 gene:ENSORLG00000001204.2 transcript:ENSORLT00000001484.2 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 127.872 bits (320), Expect = 2.197e-38
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 268
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
Match: rps27a (ribosomal protein S27a [Source:NCBI gene;Acc:101164670])

HSP 1 Score: 130.183 bits (326), Expect = 4.400e-38
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 77.0258 bits (188), Expect = 1.255e-17
Identity = 31/41 (75.61%), Postives = 34/41 (82.93%), Query Frame = 2

Query:  398 VDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTY 520
            VD NGKI RLR+ECP + CG GVFMA+HFDR YCGKC LTY
Sbjct:  132 VDENGKIHRLRRECPADECGAGVFMASHFDRHYCGKCTLTY 172

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST
Match: SMESG000048830.1 (SMESG000048830.1)

HSP 1 Score: 227.254 bits (578), Expect = 7.029e-77
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 541
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKNYTTPKKIKHKKKKVKLAVLKYYKVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMHSNKAE 155

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST
Match: SMESG000066693.1 (SMESG000066693.1)

HSP 1 Score: 131.724 bits (330), Expect = 1.381e-39
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST
Match: SMESG000025683.1 (SMESG000025683.1)

HSP 1 Score: 130.568 bits (327), Expect = 9.216e-39
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 130.568 bits (327), Expect = 9.216e-39
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST
Match: SMESG000035681.1 (SMESG000035681.1)

HSP 1 Score: 129.413 bits (324), Expect = 1.401e-38
Identity = 63/65 (96.92%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSD+IENVK+KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDSIENVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

[Close]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST
Match: SMESG000057324.1 (SMESG000057324.1)

HSP 1 Score: 132.109 bits (331), Expect = 1.629e-38
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:    1 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

HSP 2 Score: 132.109 bits (331), Expect = 1.629e-38
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 141

HSP 3 Score: 132.109 bits (331), Expect = 1.629e-38
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 2

Query:   77 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 271
            MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES
Sbjct:  153 MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217

The following BLAST results are available for this feature:

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Human
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Celegans
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Zebrafish
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Mouse
BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Cavefish
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RPS27A	2.497e-63	88.39	ribosomal protein S27a [Source:HGNC Symbol;Acc:HGN...	[more]
RPS27A	2.497e-63	88.39	ribosomal protein S27a [Source:HGNC Symbol;Acc:HGN...	[more]
RPS27A	2.497e-63	88.39	ribosomal protein S27a [Source:HGNC Symbol;Acc:HGN...	[more]
AL136454.1	1.094e-58	84.52	novel protein similar to ribosomal protein S27a RP...	[more]
AL136454.1	1.094e-58	84.52	novel protein similar to ribosomal protein S27a RP...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ubq-2	3.043e-39	98.46	Ubiquitin-60S ribosomal protein L40 Ubiquitin 60S ...	[more]
ubq-1	9.746e-36	98.46	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	9.746e-36	98.46	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	2.505e-35	98.46	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]
ubq-1	2.505e-35	98.46	Polyubiquitin-A Ubiquitin Ubiquitin-related [Sourc...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
RpS27A	8.405e-62	87.74	gene:FBgn0003942 transcript:FBtr0080016	[more]
RpL40	1.250e-38	98.46	gene:FBgn0003941 transcript:FBtr0334787	[more]
RpL40	1.250e-38	98.46	gene:FBgn0003941 transcript:FBtr0077470	[more]
CG11700	3.195e-35	93.85	gene:FBgn0029856 transcript:FBtr0333520	[more]
Ubi-p5E	4.112e-35	98.46	gene:FBgn0086558 transcript:FBtr0345892	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rps27a	2.158e-63	90.54	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rps27a	2.158e-63	90.54	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
rps27a	2.158e-63	90.54	ribosomal protein S27a [Source:ZFIN;Acc:ZDB-GENE-0...	[more]
ubb	5.185e-39	98.46	ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]	[more]
uba52	1.522e-38	98.46	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rps27a	2.264e-63	88.39	ribosomal protein S27a [Source:NCBI gene;Acc:54892...	[more]
uba52	2.340e-38	98.46	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
uba52	1.499e-37	98.41	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ENSXETT00000033679.1	4.014e-37	98.46	ubiquitin C [Source:NCBI gene;Acc:448120]	[more]
rps27a	1.076e-36	85.95	ribosomal protein S27a [Source:NCBI gene;Acc:54892...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Rps27a	9.858e-63	87.74	ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:...	[more]
Rps27a	9.858e-63	87.74	ribosomal protein S27A [Source:MGI Symbol;Acc:MGI:...	[more]
Gm8797	5.398e-39	98.46	predicted pseudogene 8797 [Source:MGI Symbol;Acc:M...	[more]
Uba52	1.439e-38	98.46	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
Gm11808	1.772e-38	98.46	predicted gene 11808 [Source:MGI Symbol;Acc:MGI:36...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|P79781\|RS27A_CHICK	3.487e-63	91.22	Ubiquitin-40S ribosomal protein S27a OS=Gallus gal...	[more]
sp\|P62979\|RS27A_HUMAN	1.199e-62	88.39	Ubiquitin-40S ribosomal protein S27a OS=Homo sapie...	[more]
sp\|P62978\|RS27A_CAVPO	1.199e-62	88.39	Ubiquitin-40S ribosomal protein S27a OS=Cavia porc...	[more]
sp\|P62992\|RS27A_BOVIN	1.199e-62	88.39	Ubiquitin-40S ribosomal protein S27a OS=Bos taurus...	[more]
sp\|P68200\|RS27A_ICTPU	1.629e-62	90.54	Ubiquitin-40S ribosomal protein S27a OS=Ictalurus ...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A099ZB74	1.028e-61	91.89	Ubiquitin-40S ribosomal protein S27a (Fragment) OS...	[more]
A0A507ESF6	1.836e-61	88.89	Ubiquitin-like domain-containing protein OS=Spizel...	[more]
A0A0L0HSX0	2.048e-61	88.89	Ubiquitin-40S ribosomal protein S27a OS=Spizellomy...	[more]
A0A507EDP5	3.172e-61	90.07	Ubiquitin-like domain-containing protein OS=Powell...	[more]
A0A507DVW0	3.462e-61	90.07	Ubiquitin-like domain-containing protein OS=Powell...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rps27a	1.829e-63	90.54	ribosomal protein S27a [Source:NCBI gene;Acc:10304...	[more]
uba52	1.290e-38	98.46	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
uba52	1.290e-38	98.46	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
si:ch211-202a12.4	1.427e-35	98.46	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
nedd8l	3.376e-19	56.45	NEDD8-like [Source:NCBI gene;Acc:103044361]	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 5


Match Name	E-value	Identity	Description
UBB	2.651e-36	98.46	ubiquitin B [Source:HGNC Symbol;Acc:HGNC:12463]	[more]
ENSPMAT00000007011.1	3.966e-36	84.30	pep scaffold:Pmarinus_7.0:GL484716:14406:16135:-1 ...	[more]
ENSPMAT00000006254.1	1.018e-11	46.15	pep scaffold:Pmarinus_7.0:GL477433:3744:20801:-1 g...	[more]
ENSPMAT00000006261.1	1.049e-11	44.44	pep scaffold:Pmarinus_7.0:GL477433:28222:29567:1 g...	[more]
zfand4	1.845e-9	44.26	zinc finger, AN1-type domain 4 [Source:ZFIN;Acc:ZD...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 5


Match Name	E-value	Identity	Description
RPS31	7.085e-56	85.14	Fusion protein cleaved to yield ribosomal protein ...	[more]
RPL40B	2.881e-39	96.92	Ubiquitin-ribosomal 60S subunit protein L40B fusio...	[more]
RPL40A	2.881e-39	96.92	Ubiquitin-ribosomal 60S subunit protein L40A fusio...	[more]
UBI4	9.776e-37	96.92	Ubiquitin; becomes conjugated to proteins, marking...	[more]
RUB1	2.302e-16	50.82	Ubiquitin-like protein with similarity to mammalia...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 5


Match Name	E-value	Identity	Description
EDO48503	7.187e-67	91.61	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO45561	4.666e-39	98.46	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO31255	1.665e-38	98.41	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32403	1.141e-37	98.46	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]
EDO32547	1.727e-35	98.46	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
rps27a	5.563e-62	89.86	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]
uba52	4.816e-39	98.46	ubiquitin A-52 residue ribosomal protein fusion pr...	[more]
ENSORLT00000015052.2	1.292e-38	98.46	pep primary_assembly:ASM223467v1:12:2267197:226848...	[more]
ENSORLT00000001484.2	2.197e-38	98.44	pep primary_assembly:ASM223467v1:12:2266741:226920...	[more]
rps27a	4.400e-38	98.46	ribosomal protein S27a [Source:NCBI gene;Acc:10116...	[more]

BLAST of Ubiquitin-40S ribosomal protein S27a vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 5


Match Name	E-value	Identity	Description
SMESG000048830.1	7.029e-77	100.00	SMESG000048830.1	[more]
SMESG000066693.1	1.381e-39	100.00	SMESG000066693.1	[more]
SMESG000025683.1	9.216e-39	98.46	SMESG000025683.1	[more]
SMESG000035681.1	1.401e-38	96.92	SMESG000035681.1	[more]
SMESG000057324.1	1.629e-38	100.00	SMESG000057324.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30024115 ID=SMED30024115|Name=Ubiquitin-40S ribosomal protein S27a|organism=Schmidtea mediterranea sexual|type=transcript|length=573bp
TTTAAAATTAATCTTTGTAAATACAAATTAATTTGTTTTAATTCTTGTAT
TTAAAAACAAATATTAAATTTAAAAAATGCAGATTTTTGTTAAAACCCTA
ACGGGTAAAACAATTACACTTGAAGTTGAATCTTCAGATACCATTGAAAA
TGTTAAAGCCAAAATTCAAGACAAGGAAGGCATTCCACCAGATCAACAGA
GACTAATCTTCGCTGGAAAACAATTAGAAGATGGTCGAACATTGTCTGAC
TACAACATCCAAAAAGAAAGTACTCTCCATTTGGTACTTAGACTTAGAGG
AGGTGGAAAGAAACGTAAGAAGAAGAATTATACTACTCCTAAAAAAATTA
AGCATAAGAAGAAGAAGGTTAAGTTGGCTGTTCTTAAATACTACAAAGTT
GACTCAAATGGTAAAATCCAAAGATTGAGAAAGGAATGCCCAAATGAAAG
CTGTGGTCCCGGAGTTTTCATGGCTGCTCATTTCGATCGTCAATACTGTG
GAAAATGTTGCTTGACATACATGCATTCAAATAAAGCAGAATAAATTAAT
AAAATTTTTGGATTTAAAAAAAA

protein sequence of SMED30024115-orf-1

>SMED30024115-orf-1 ID=SMED30024115-orf-1|Name=SMED30024115-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=156bp
MQIFVKTLTGKTITLEVESSDTIENVKAKIQDKEGIPPDQQRLIFAGKQL
EDGRTLSDYNIQKESTLHLVLRLRGGGKKRKKKNYTTPKKIKHKKKKVKL
AVLKYYKVDSNGKIQRLRKECPNESCGPGVFMAAHFDRQYCGKCCLTYMH
SNKAE*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000103	central nervous system
PLANA:0000208	testis
PLANA:0000429	neoblast
PLANA:0002109	X1 cell

Vocabulary: **INTERPRO**
Term	Definition
IPR038582	S27a-like_sf
IPR019956	Ubiquitin_dom
IPR002906	Ribosomal_S27a
IPR000626	Ubiquitin-like_dom
IPR019954	Ubiquitin_CS
IPR029071	Ubiquitin-like_domsf
IPR011332	Ribosomal_zn-bd

Vocabulary: **biological process**
Term	Definition
GO:0006412	translation

Vocabulary: **molecular function**
Term	Definition
GO:0003735	structural constituent of ribosome
GO:0005515	protein binding

Vocabulary: **cellular component**
Term	Definition
GO:0005840	ribosome
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0030529	intracellular ribonucleoprotein complex

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 11..31 score: 85.24 coord: 53..74 score: 92.03 coord: 32..52 score: 95.05
IPR002906	Ribosomal protein S27a	SMART	SM01402	Ribosomal_S27_2	coord: 102..147 e-value: 3.4E-29 score: 113.0
IPR002906	Ribosomal protein S27a	PFAM	PF01599	Ribosomal_S27	coord: 102..147 e-value: 6.1E-28 score: 96.7
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 1.2E-35 score: 134.5
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 1.9E-34 score: 117.3
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 30.713
IPR038582	S27a-like superfamily	GENE3D	G3DSA:2.20.25.660		coord: 81..155 e-value: 2.0E-40 score: 139.0
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 1..80 e-value: 1.8E-44 score: 151.4
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..150
None	No IPR available	PANTHER	PTHR10666:SF291		coord: 1..150
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 1..76 e-value: 5.77234E-56 score: 168.006
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	SSF57829	Zn-binding ribosomal proteins	coord: 100..152
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	SSF54236	Ubiquitin-like	coord: 1..93