C2H2-type domain-containing protein

Overview
NameC2H2-type domain-containing protein
Smed IDSMED30024108
Length (bp)1401
Neoblast Clusters

Zeng et. al., 2018



▻ Overview

▻ Neoblast Population

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

 

Overview

 

Single cell RNA-seq of pluripotent neoblasts and its early progenies


We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)



Explore this single cell expression dataset with our NB Cluster Shiny App



 

Neoblast Population

 

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.


Expression of C2H2-type domain-containing protein (SMED30024108) t-SNE clustered cells

Violin plots show distribution of expression levels for C2H2-type domain-containing protein (SMED30024108) in cells (dots) of each of the 12 neoblast clusters.

 

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Sub-lethal Irradiated Surviving X1 and X2 Cell Population

 

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of C2H2-type domain-containing protein (SMED30024108) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for C2H2-type domain-containing protein (SMED30024108) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

 

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Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

 

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Anatomical Expression

PAGE et. al., 2020



SMED30024108

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE



PAGE Curations: 5

  
Expressed InReference TranscriptGene ModelsPublished TranscriptTranscriptomePublicationSpecimenLifecycleEvidence
head regionSMED30024108SMESG000010914.1 SmedASXL_006409SmedAsxl_ww_GCZZ01PMID:27034770
Currie et al., 2016		whole organism asexual adult RNA-sequencing evidence
protonephridiaSMED30024108SMESG000010914.1 dd_Smed_v4_11240_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
cephalic gangliaSMED30024108SMESG000010914.1 dd_Smed_v4_11240_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
neoblastSMED30024108SMESG000010914.1 dd_Smed_v4_11240_0_1dd_Smed_v4PMID:29674431
Fincher et al., 2018		FACS sorted cell population asexual adult single-cell RNA-sequencing evidence
head regionSMED30024108SMESG000010914.1 dd_Smed_v6_11240_0_1dd_Smed_v6PMID:28171748
Stückemann et al., 2017		whole organism asexual adult RNA-sequencing evidence
Note: Hover over icons to view figure legend
Homology
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A4E0RUS9 (Zinc finger protein OS=Fasciola hepatica OX=6192 GN=D915_003077 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.365e-15
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 1224
            VHS  RP  C IC  SYKW WDLGRHF K+H +  NPY+K
Sbjct:  321 VHSKERPHRCVICGSSYKWKWDLGRHFDKSHQKNMNPYKK 360

HSP 2 Score: 55.0694 bits (131), Expect = 2.365e-15
Identity = 46/160 (28.75%), Postives = 73/160 (45.62%), Query Frame = 2 
Query:  653 QYLNQNNETTNIVEQEGFCKPCQQQEALDLSIRK----TDQINQIAKINVKKFNQKIILKSEREHRKENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDKL-----QCPSCQYRAKWPTELEKHVM 1105
            +Y N + + T+ +E+  F     Q++  +  +R+    T QIN+ +K  V K                   V  C  CK  F T+ +LN HF + H  F+++    L+H++S  +       ++   QT     L      CP C Y AKWPTEL+KH+M
Sbjct:  183 RYPNTDEKCTSPLEK--FSSSRTQRKRPNTGLRRARNSTTQINKASKTGVGK-----------------QPVTQCHQCKVLFPTLMELNSHFLVEHA-FILRT--ELEHTKSWKSHALETMYIQSDPQTAIRGGLLSTGYPCPYCDYFAKWPTELQKHIM 320
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BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A504Z0N1 (Zinc finger protein OS=Fasciola gigantica OX=46835 GN=FGIG_09392 PE=4 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 2.444e-15
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 1224
            VHS  RP  C IC  SYKW WDLGRHF K+H +  NPY+K
Sbjct:  321 VHSKERPHRCVICGSSYKWKWDLGRHFDKSHQKNMNPYKK 360

HSP 2 Score: 55.0694 bits (131), Expect = 2.444e-15
Identity = 46/160 (28.75%), Postives = 73/160 (45.62%), Query Frame = 2 
Query:  653 QYLNQNNETTNIVEQEGFCKPCQQQEALDLSIRK----TDQINQIAKINVKKFNQKIILKSEREHRKENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDKL-----QCPSCQYRAKWPTELEKHVM 1105
            +YLN + + T+ +E+  F     Q++  +  +R+    T QIN+ +K  V K                   V  C  CK  F  + +LN HF + H  F+++    L+H++S  +       ++   QT     L      CP C Y AKWPTEL+KH+M
Sbjct:  183 RYLNTDEKCTSPLEK--FSSSRTQRKRPNTGLRRARNSTTQINKTSKTGVGK-----------------QPVTQCHQCKVLFPNLMELNSHFLVEHA-FILRT--ELEHTKSWKSHALETMYIQSDPQTAIRGGLLSTGYPCPYCDYFAKWPTELQKHIM 320
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A1S6KMJ7 (C2H2-type domain-containing protein OS=Schmidtea mediterranea OX=79327 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 7.086e-15
Identity = 32/92 (34.78%), Postives = 51/92 (55.43%), Query Frame = 2 
Query:  854 VITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDK--------LQCPSCQYRAKWPTELEKHVM 1105
            V +C  C  +F ++  LN HF   HE  +IK    L+ ++S   +++H     C+ + +++ K         QCP C+Y AKWPTEL+KH+M
Sbjct:  214 VTSCLQCSSSFASLIDLNTHFLNEHELCLIK---ELELAKS---WKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIM 299

HSP 2 Score: 54.6842 bits (130), Expect = 7.086e-15
Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 1224
            VHS  RP  C IC  +YKW WDLGRHF K+H    NPY+K
Sbjct:  300 VHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKK 339
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: A0A5K4FDC1 (Uncharacterized protein OS=Schistosoma mansoni OX=6183 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 1.466e-14
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 1224
            VHS  RP  C IC  SYKW WDLGRHF K+H++  NPY+K
Sbjct:  418 VHSKQRPHRCIICGLSYKWKWDLGRHFDKSHNRTMNPYKK 457

HSP 2 Score: 53.1434 bits (126), Expect = 1.466e-14
Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 2 
Query:  854 VITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTK---------SIDKLQCPSCQYRAKWPTELEKHVM 1105
            V  C  C   F ++ +LN HF   H D +++    ++H++S   +++H     CL   +         ++    CPSC Y AKWPTEL+KH+M
Sbjct:  331 VTRCNHCHVLFPSLYELNNHFIKEH-DVILQAE--MEHTKS---WKSHTIDDSCLQNMRILMNRSTKMNMSGYPCPSCDYVAKWPTELQKHIM 417
[Close]
BLAST of C2H2-type domain-containing protein vs. TrEMBL
Match: G4LWG3 (Zinc finger protein, putative OS=Schistosoma mansoni OX=6183 GN=Smp_125970 PE=4 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.317e-14
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 1224
            VHS  RP  C IC  SYKW WDLGRHF K+H++  NPY+K
Sbjct:  135 VHSKQRPHRCIICGLSYKWKWDLGRHFDKSHNRTMNPYKK 174

HSP 2 Score: 52.373 bits (124), Expect = 2.317e-14
Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 2 
Query:  854 VITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTK---------SIDKLQCPSCQYRAKWPTELEKHVM 1105
            V  C  C   F ++ +LN HF   H D +++    ++H++S   +++H     CL   +         ++    CPSC Y AKWPTEL+KH+M
Sbjct:   48 VTRCNHCHVLFPSLYELNNHFIKEH-DVILQAE--MEHTKS---WKSHTIDDSCLQNMRILMNRSTKMNMSGYPCPSCDYVAKWPTELQKHIM 134
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000010914.1 (SMESG000010914.1)

HSP 1 Score: 390.963 bits (1003), Expect = 9.424e-136
Identity = 188/188 (100.00%), Postives = 188/188 (100.00%), Query Frame = 2 
Query:  542 MDLSKHLLLNQKFLNPNLDPMMILDTYRSFMQLQEIYQYLNQNNETTNIVEQEGFCKPCQQQEALDLSIRKTDQINQIAKINVKKFNQKIILKSEREHRKENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDKLQCPSCQYRAKWPTELEKHVM 1105
            MDLSKHLLLNQKFLNPNLDPMMILDTYRSFMQLQEIYQYLNQNNETTNIVEQEGFCKPCQQQEALDLSIRKTDQINQIAKINVKKFNQKIILKSEREHRKENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDKLQCPSCQYRAKWPTELEKHVM
Sbjct:    1 MDLSKHLLLNQKFLNPNLDPMMILDTYRSFMQLQEIYQYLNQNNETTNIVEQEGFCKPCQQQEALDLSIRKTDQINQIAKINVKKFNQKIILKSEREHRKENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDKLQCPSCQYRAKWPTELEKHVM 188

HSP 2 Score: 109.383 bits (272), Expect = 4.126e-27
Identity = 49/49 (100.00%), Postives = 49/49 (100.00%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRKTSRVKSKVV 1251
            VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRKTSRVKSKVV
Sbjct:  189 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRKTSRVKSKVV 237
[Close]
BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Match: SMESG000004948.1 (SMESG000004948.1)

HSP 1 Score: 56.9954 bits (136), Expect = 1.458e-18
Identity = 38/121 (31.40%), Postives = 60/121 (49.59%), Query Frame = 2 
Query:  767 NQIAKINVKKFNQKIILKSEREHRKENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQAHLASLRCLNQTKSIDK--------LQCPSCQYRAKWPTELEKHVM 1105
            N+ +KI     N   +  S R        V +C  C  +F ++  LN HF   HE  +IK    L+ ++S   +++H     C+ + +++ K         QCP C+Y AKWPTEL+KH+M
Sbjct:  188 NKASKIAT---NMTAVKSSRRTSGGGKQPVTSCLQCSSSFASLIDLNTHFLNEHELCLIK---ELELAKS---WKSHAVEEICMQELEAVVKQGEIETTGYQCPHCEYFAKWPTELQKHIM 299

HSP 2 Score: 54.6842 bits (130), Expect = 1.458e-18
Identity = 24/40 (60.00%), Postives = 27/40 (67.50%), Query Frame = 1 
Query: 1105 VHSFGRPFSCYICSKSYKWIWDLGRHFHKNHSQFDNPYRK 1224
            VHS  RP  C IC  +YKW WDLGRHF K+H    NPY+K
Sbjct:  300 VHSKERPHQCIICGLTYKWKWDLGRHFDKSHLPAVNPYKK 339
The following BLAST results are available for this feature:
BLAST of C2H2-type domain-containing protein vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A4E0RUS92.365e-1562.50Zinc finger protein OS=Fasciola hepatica OX=6192 G... [more]
A0A504Z0N12.444e-1562.50Zinc finger protein OS=Fasciola gigantica OX=46835... [more]
A0A1S6KMJ77.086e-1534.78C2H2-type domain-containing protein OS=Schmidtea m... [more]
A0A5K4FDC11.466e-1462.50Uncharacterized protein OS=Schistosoma mansoni OX=... [more]
G4LWG32.317e-1462.50Zinc finger protein, putative OS=Schistosoma manso... [more]
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BLAST of C2H2-type domain-containing protein vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of C2H2-type domain-containing protein vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2
Match NameE-valueIdentityDescription
SMESG000010914.19.424e-136100.00SMESG000010914.1[more]
SMESG000004948.11.458e-1831.40SMESG000004948.1[more]
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Sequences
The following sequences are available for this feature:

transcript sequence

>SMED30024108 ID=SMED30024108|Name=C2H2-type domain-containing protein|organism=Schmidtea mediterranea sexual|type=transcript|length=1401bp
TATTAAAATTTAACTAAATCATCTAATTAGTCAGTTTTAATATATATTAT
TATACGATTTATTTATCGATCTTATTTGGCAAGGAATCATTGAATAATGG
TTAATATGTTGATCAGTTATTTTGTCTGAGCCGATTGATCTGCACCACAT
GCTAAGACAAGTAGTCTATTGTATCAATGGAGCTACTGTATTTATTTTGG
AATTAATAATGCCGCATCAAACTCAGTAAGAGACCTTGATATGCTAATGA
TTTTAAGTCATGGCTACATCAGGTACAGTTTGGCGCTAGTGGTTGTACCT
ATGTCGTACATCCTGGTAGTTGCAATTTGATCTTGTTTTGATATCGAATG
ATAATAAGTAGCAGTAGTCAATGGATGGCAAAATGAATTATTAATTTTCT
GAGACATTGTTATCCATCACCGTCATTATCCGGATACTTGGCATACGTGA
TTTTACAACTAAGTATTGGTTGACACTTCTTATGCACACAAAATAACTTT
CTATAAATGGTGTTTATATTTCTACAAAAAACACATACATCATGGATTTA
TCGAAACACCTTTTGTTAAATCAAAAATTTTTGAATCCGAATCTTGATCC
AATGATGATTCTCGATACATATCGAAGTTTCATGCAATTACAAGAAATAT
ATCAGTATTTGAATCAAAATAACGAAACAACCAATATAGTTGAACAAGAA
GGTTTTTGTAAACCTTGTCAGCAACAAGAAGCACTTGATTTAAGTATCAG
AAAAACTGACCAAATCAATCAAATAGCAAAAATTAATGTGAAAAAGTTCA
ACCAGAAAATCATTCTTAAATCAGAAAGAGAACATAGAAAAGAAAATGTT
AACGTTATTACTTGTGCGATGTGTAAATACACATTTCTTACAATGAGTCA
ATTAAATCGGCATTTTGGAATGTATCACGAAGATTTCGTAATTAAGTATT
CTTATAATTTACAACACAGTCGAAGCAAATTGACATTCCAAGCACATCTG
GCTAGCTTAAGGTGTTTGAATCAAACAAAGTCAATTGATAAACTCCAATG
CCCATCTTGTCAATATCGGGCTAAATGGCCAACAGAGTTGGAAAAACATG
TGATGTTCATTCTTTTGGTAGACCATTTTCTTGCTATATTTGCTCAAAAT
CATACAAATGGATTTGGGATTTGGGCCGTCATTTTCATAAAAATCACAGT
CAGTTTGACAACCCATATCGGAAAACAAGCAGAGTCAAATCTAAAGTGGT
TTGAACTACAATTTATTATTAGCCAAATATAGACTAAATTAACTACCTCA
TTTAATGTTAAAAATAAAATAAAAAGAATCATTTAGTGGTTTATTAGTCA
TATTTTTCTGTTATTTGAGAAATATTTTATGTTATGGTTAACTTTATGAA
G
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protein sequence of SMED30024108-orf-1

>SMED30024108-orf-1 ID=SMED30024108-orf-1|Name=SMED30024108-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=247bp
MDLSKHLLLNQKFLNPNLDPMMILDTYRSFMQLQEIYQYLNQNNETTNIV
EQEGFCKPCQQQEALDLSIRKTDQINQIAKINVKKFNQKIILKSEREHRK
ENVNVITCAMCKYTFLTMSQLNRHFGMYHEDFVIKYSYNLQHSRSKLTFQ
AHLASLRCLNQTKSIDKLQCPSCQYRAKWPTELEKHVMFILLVDHFLAIF
AQNHTNGFGIWAVIFIKITVSLTTHIGKQAESNLKWFELQFIISQI*
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Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Planarian Anatomy
TermDefinition
PLANA:0000020protonephridia
PLANA:0000418head
Vocabulary: INTERPRO
TermDefinition
IPR007087Znf_C2H2
IPR015880Znf_C2H2-like
Vocabulary: molecular function
TermDefinition
GO:0046872metal ion binding
GO:0003676nucleic acid binding