Mitochondrial ATP synthase subunit 9

Overview


Name	Mitochondrial ATP synthase subunit 9
Smed ID	SMED30024106
Length (bp)	702

Neoblast Clusters

▻ Sub-lethal Irradiated Surviving X1 and X2 Cell Population

Overview

Single cell RNA-seq of pluripotent neoblasts and its early progenies

We isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.

We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)

Explore this single cell expression dataset with our NB Cluster Shiny App

Neoblast Population

t-SNE plot shows two-dimensional representation of global gene expression relationships among all neoblasts (n = 7,088 after filter). Cluster identity was assigned based on the top 10 marker genes of each cluster (Table S2), followed by inspection of RNA in situ hybridization patterns. Neoblast groups, Nb.

Expression of Mitochondrial ATP synthase subunit 9 (SMED30024106) t-SNE clustered cells

Violin plots show distribution of expression levels for Mitochondrial ATP synthase subunit 9 (SMED30024106) in cells (dots) of each of the 12 neoblast clusters.

Sub-lethal Irradiated Surviving X1 and X2 Cell Population

t-SNE plot of surviving X1 and X2 cells (n = 1,039 after QC filter) after sub-lethal irradiation. Colors indicate unbiased cell classification via graph-based clustering. SL, sub-lethal irradiated cell groups.

Expression of Mitochondrial ATP synthase subunit 9 (SMED30024106) in the t-SNE clustered sub-lethally irradiated X1 and X2 cells.

Violin plots show distribution of expression levels for Mitochondrial ATP synthase subunit 9 (SMED30024106) in cells (dots) of each of the 10 clusters of sub-leathally irradiated X1 and X2 cells.

Embryonic Expression

Davies et. al., 2017

Hover the mouse over a column in the graph to view average RPKM values per sample.
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Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult.
For further information about sample preparation and analysis for the single animal RNA-Seq experiment, please refer to the Materials and Methods

Anatomical Expression

PAGE et. al., 2020

SMED30024106

has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGE

PAGE Curations: 9

Expressed In	Reference Transcript	Gene Models	Published Transcript	Transcriptome	Publication
nervous system	SMED30024106	SMESG000059768.1	dd_Smed_v4_401_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
gut	SMED30024106	SMESG000059768.1	dd_Smed_v4_401_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
epidermis	SMED30024106	SMESG000059768.1	dd_Smed_v4_401_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
neoblast	SMED30024106	SMESG000059768.1	dd_Smed_v4_401_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
parenchymal cell	SMED30024106	SMESG000059768.1	dd_Smed_v4_401_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
muscle cell	SMED30024106	SMESG000059768.1	dd_Smed_v4_401_0_1	dd_Smed_v4	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30024106	SMESG000059768.1	Contig47116	newmark_ests	PMID:29674431 Fincher et al., 2018
Smed sexual biotype	SMED30024106	SMESG000059768.1	Contig47116	uc_Smed_v2	PMID:29674431 Fincher et al., 2018
Category 3 cell	SMED30024106	SMESG000059768.1	dd_Smed_v6_401_0	dd_Smed_v6	PMID:29674432 Plass et al., 2018

Note: Hover over icons to view figure legend

Homology

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BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Match: ATP5MC1 (ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841])

HSP 1 Score: 96.2857 bits (238), Expect = 4.685e-25
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 2

Query:  212 KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            +F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   27 EFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 109

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BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Match: ATP5MC1 (ATP synthase membrane subunit c locus 1 [Source:HGNC Symbol;Acc:HGNC:841])

HSP 1 Score: 96.6709 bits (239), Expect = 5.286e-25
Identity = 75/95 (78.95%), Postives = 81/95 (85.26%), Query Frame = 2

Query:  185 SPLANIKDC---KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SP+ + K     +F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   32 SPVNSSKQVARREFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 126

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BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Match: ATP5MC2 (ATP synthase membrane subunit c locus 2 [Source:HGNC Symbol;Acc:HGNC:842])

HSP 1 Score: 97.0561 bits (240), Expect = 5.335e-25
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  188 PLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            PL ++   + F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 PLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

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Query:  188 PLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            PL ++   + F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 PLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

Query:  188 PLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            PL ++   + F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 PLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

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BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Celegans
Match: Y82E9BR.3 (ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9BKS0])

HSP 1 Score: 92.8189 bits (229), Expect = 4.682e-24
Identity = 75/109 (68.81%), Postives = 82/109 (75.23%), Query Frame = 2

Query:  140 LNLMRSFLVNNVQKLSPLANIKDCKFHTSTV-RNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            L L RS L +       + N    +  ++TV R DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:    8 LPLTRSLLASRAPLALRMENAVAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

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Query:  140 LNLMRSFLVNNVQKLSPLANIKDCKFHTSTV-RNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            L L RS L +       + N    +  ++TV R DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:    8 LPLTRSLLASRAPLALRMENAVAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

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Query:  140 LNLMRSFLVNNVQKLSPLANIKDCKFHTSTV-RNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            L L RS L +       + N    +  ++TV R DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:    8 LPLTRSLLASRAPLALRMENAVAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

[Close]

Query:  140 LNLMRSFLVNNVQKLSPLANIKDCKFHTSTV-RNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            L L RS L +       + N    +  ++TV R DID AAKYIGAGAAT GVAGSGAGIG VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCL M F+ILFA 
Sbjct:    8 LPLTRSLLASRAPLALRMENAVAARMISTTVARKDIDSAAKYIGAGAATVGVAGSGAGIGNVFGALVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLTMGFMILFAL 116

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BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0085774)

HSP 1 Score: 101.679 bits (252), Expect = 4.667e-27
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 2

Query:  176 QKLSPLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            Q  +P+A +   + F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   42 QNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0085773)

HSP 1 Score: 101.679 bits (252), Expect = 4.667e-27
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 2

Query:  176 QKLSPLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            Q  +P+A +   + F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   42 QNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0305121)

HSP 1 Score: 101.679 bits (252), Expect = 4.667e-27
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 2

Query:  176 QKLSPLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            Q  +P+A +   + F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   42 QNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0085772)

HSP 1 Score: 101.679 bits (252), Expect = 4.667e-27
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 2

Query:  176 QKLSPLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            Q  +P+A +   + F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   42 QNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Match: ATPsynC (gene:FBgn0039830 transcript:FBtr0306237)

HSP 1 Score: 101.679 bits (252), Expect = 4.667e-27
Identity = 76/97 (78.35%), Postives = 83/97 (85.57%), Query Frame = 2

Query:  176 QKLSPLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            Q  +P+A +   + F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   42 QNTTPVALLPQIRSFQTSPVTRDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Match: atp5mc3a (ATP synthase membrane subunit c locus 3a [Source:ZFIN;Acc:ZDB-GENE-040426-857])

HSP 1 Score: 101.293 bits (251), Expect = 8.235e-27
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SP+A +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   47 SPVAQMALRSFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SP+A +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   47 SPVAQMALRSFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Match: atp5mc3b (ATP synthase membrane subunit c locus 3b [Source:ZFIN;Acc:ZDB-GENE-020814-1])

HSP 1 Score: 96.2857 bits (238), Expect = 8.354e-25
Identity = 71/82 (86.59%), Postives = 75/82 (91.46%), Query Frame = 2

Query:  215 FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   58 FQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

Query:  215 FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   58 FQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Match: atp5mc1 (ATP synthase membrane subunit c locus 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1966])

HSP 1 Score: 95.1301 bits (235), Expect = 2.274e-24
Identity = 71/82 (86.59%), Postives = 74/82 (90.24%), Query Frame = 2

Query:  215 FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            F TS    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   56 FQTSVASRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 137

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 97.4413 bits (241), Expect = 3.538e-25
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 2

Query:  212 KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            +F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   52 EFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 134

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 97.0561 bits (240), Expect = 4.516e-25
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 2

Query:  212 KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            +F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   50 EFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 132

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 97.0561 bits (240), Expect = 5.185e-25
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 2

Query:  212 KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            +F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   59 EFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 141

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc3 (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:448663])

HSP 1 Score: 96.6709 bits (239), Expect = 6.912e-25
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 2

Query:  212 KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            +F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   48 EFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 130

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Match: atp5mc1 (ATP synthase membrane subunit c locus 1 [Source:NCBI gene;Acc:448692])

HSP 1 Score: 88.9669 bits (219), Expect = 6.132e-22
Identity = 69/81 (85.19%), Postives = 73/81 (90.12%), Query Frame = 2

Query:  218 HTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
             +S    DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   53 QSSVTCRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 133

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
Match: Atp5g1 (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C1 (subunit 9) [Source:MGI Symbol;Acc:MGI:107653])

HSP 1 Score: 97.4413 bits (241), Expect = 2.813e-25
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL  +   +F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   45 SPL-QVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL  +   +F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   45 SPL-QVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL  +   +F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   45 SPL-QVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL  +   +F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   45 SPL-QVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
Match: Atp5g2 (ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C2 (subunit 9) [Source:MGI Symbol;Acc:MGI:1915192])

HSP 1 Score: 97.0561 bits (240), Expect = 4.420e-25
Identity = 74/92 (80.43%), Postives = 79/92 (85.87%), Query Frame = 2

Query:  188 PLAN-IKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            PL + I    F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   54 PLTSLIPSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 145

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q9U505|AT5G_MANSE (ATP synthase lipid-binding protein, mitochondrial OS=Manduca sexta OX=7130 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.123e-25
Identity = 78/119 (65.55%), Postives = 87/119 (73.11%), Query Frame = 2

Query:  152 RSFLVNNVQKLSPLANIKDC---------------KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            RS + +N   + PLA +                   F T++V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFL+LFAF
Sbjct:   13 RSAIFSNAAVVRPLAAVSTQTQLVPAAPAQLSAVRSFQTTSVTKDIDSAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLLLFAF 131

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q5RAP9|AT5G2_PONAB (ATP synthase F(0) complex subunit C2, mitochondrial OS=Pongo abelii OX=9601 GN=ATP5MC2 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 8.266e-25
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  188 PLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            PL ++   + F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 PLTSLVSSRNFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q9CR84|AT5G1_MOUSE (ATP synthase F(0) complex subunit C1, mitochondrial OS=Mus musculus OX=10090 GN=Atp5mc1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.968e-24
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL  +   +F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   45 SPL-QVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q06645|AT5G1_RAT (ATP synthase F(0) complex subunit C1, mitochondrial OS=Rattus norvegicus OX=10116 GN=Atp5mc1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.410e-24
Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL  +   +F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   45 SPL-QVARREFQTSVISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 135

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Match: sp|Q06055|AT5G2_HUMAN (ATP synthase F(0) complex subunit C2, mitochondrial OS=Homo sapiens OX=9606 GN=ATP5MC2 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.562e-24
Identity = 73/92 (79.35%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  188 PLANIKDCK-FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            PL ++   + F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 PLTSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A0R3UFR3 (Uncharacterized protein OS=Mesocestoides corti OX=53468 GN=MCOS_LOCUS5982 PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.491e-29
Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 2

Query:  119 KNMSLCRLNLMRSFLVNNVQKLSPLA--NIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            K M++     +   +++ + KL PLA  +I     HTS VR DIDQAAKYIGAGAAT GVAGSGAGIG+VFG+LVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    9 KTMTVASRPFVSRAVLSGLPKLCPLAASDITSKNLHTSVVRRDIDQAAKYIGAGAATIGVAGSGAGIGSVFGNLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 125

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A5K3EK72 (Uncharacterized protein OS=Mesocestoides corti OX=53468 PE=4 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.950e-29
Identity = 84/117 (71.79%), Postives = 95/117 (81.20%), Query Frame = 2

Query:  119 KNMSLCRLNLMRSFLVNNVQKLSPLA--NIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            K M++     +   +++ + KL PLA  +I     HTS VR DIDQAAKYIGAGAAT GVAGSGAGIG+VFG+LVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:   10 KTMTVASRPFVSRAVLSGLPKLCPLAASDITSKNLHTSVVRRDIDQAAKYIGAGAATIGVAGSGAGIGSVFGNLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 126

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A0R3SFT4 (ATP-synt_C domain-containing protein OS=Hymenolepis diminuta OX=6216 GN=HDID_LOCUS3720 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.884e-29
Identity = 83/118 (70.34%), Postives = 94/118 (79.66%), Query Frame = 2

Query:  116 TKNMSLCRLNLMRSFLVNNVQKLSPLAN--IKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
             K+++L         ++ N+ KLSPLA+  I     HTS    DIDQAAKYIGAGAAT GVAGSGAGIG+VFG+LV+GYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    8 VKSLALASRPAASRLIITNLPKLSPLASTEIVSKNLHTSVAHRDIDQAAKYIGAGAATIGVAGSGAGIGSVFGNLVMGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 125

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A183ANJ8 (ATP-synt_C domain-containing protein OS=Echinostoma caproni OX=27848 GN=ECPE_LOCUS8532 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 2.853e-28
Identity = 81/118 (68.64%), Postives = 94/118 (79.66%), Query Frame = 2

Query:  110 CKTKNMSLCRLNLMRSFLVNNVQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            C+++ +    L+L+R      +  +S   ++   KFHTS VR DIDQAAKYIGAGAAT G AGSGAGIG+VFG+LVIGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    7 CQSRVVIRPALSLLRGSQALRLSAVSAAPSVLSSKFHTSIVRRDIDQAAKYIGAGAATVGAAGSGAGIGSVFGNLVIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 124

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Match: A0A0R3TAM1 (ATP-synt_C domain-containing protein OS=Rodentolepis nana OX=102285 GN=HNAJ_LOCUS4108 PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 3.489e-28
Identity = 80/118 (67.80%), Postives = 97/118 (82.20%), Query Frame = 2

Query:  116 TKNMSLCRLNLMRSFLVNNVQKLSPLANIK--DCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
             K++++         +++N+ KLSP+A+++  +   HTS    DIDQAAKYIGAGAAT GVAGSGAGIG+VFG+LV+GYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLIL+AF
Sbjct:    8 VKSLAMASRPAASRLVISNLPKLSPIASMEIVNKNLHTSIAHRDIDQAAKYIGAGAATIGVAGSGAGIGSVFGNLVMGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILYAF 125

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: atp5mc3b (ATP synthase F(0) complex subunit C2, mitochondrial-like [Source:NCBI gene;Acc:103042584])

HSP 1 Score: 100.908 bits (250), Expect = 7.740e-27
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL+ +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   38 SPLSQVALRGFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 129

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: atp5mc3b (ATP synthase F(0) complex subunit C2, mitochondrial-like [Source:NCBI gene;Acc:103042584])

HSP 1 Score: 100.523 bits (249), Expect = 1.320e-26
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL+ +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   48 SPLSQVALRGFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: atp5mc3b (ATP synthase F(0) complex subunit C2, mitochondrial-like [Source:NCBI gene;Acc:103042584])

HSP 1 Score: 100.523 bits (249), Expect = 1.320e-26
Identity = 75/92 (81.52%), Postives = 80/92 (86.96%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SPL+ +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   48 SPLSQVALRGFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: ENSAMXT00000036927.1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:103027531])

HSP 1 Score: 98.2117 bits (243), Expect = 1.089e-25
Identity = 74/92 (80.43%), Postives = 79/92 (85.87%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SP+  +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   49 SPITQMCLRSFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Match: ENSAMXT00000049606.1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:103027531])

HSP 1 Score: 98.2117 bits (243), Expect = 1.224e-25
Identity = 74/92 (80.43%), Postives = 79/92 (85.87%), Query Frame = 2

Query:  185 SPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            SP+  +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   47 SPITQMCLRSFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: atp5mc3a (ATP synthase membrane subunit c locus 3a [Source:ZFIN;Acc:ZDB-GENE-040426-857])

HSP 1 Score: 98.9821 bits (245), Expect = 3.917e-27
Identity = 76/96 (79.17%), Postives = 80/96 (83.33%), Query Frame = 2

Query:  173 VQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            V   S LA +    F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:    6 VSAPSGLALVARRDFQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 101

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: atp5mc3b (ATP synthase membrane subunit c locus 3b [Source:ZFIN;Acc:ZDB-GENE-020814-1])

HSP 1 Score: 97.4413 bits (241), Expect = 4.349e-26
Identity = 75/100 (75.00%), Postives = 80/100 (80.00%), Query Frame = 2

Query:  161 LVNNVQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            L   VQ    L +     F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   40 LFPAVQHQGTLVHAAQRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 139

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: atp5mc3b (ATP synthase membrane subunit c locus 3b [Source:ZFIN;Acc:ZDB-GENE-020814-1])

HSP 1 Score: 97.4413 bits (241), Expect = 7.299e-26
Identity = 74/96 (77.08%), Postives = 79/96 (82.29%), Query Frame = 2

Query:  173 VQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            VQ    L +     F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   61 VQHQGTLVHAAQRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 156

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Match: ENSPMAT00000000839.1 (pep scaffold:Pmarinus_7.0:GL479015:51266:53309:-1 gene:ENSPMAG00000000766.1 transcript:ENSPMAT00000000839.1 gene_biotype:protein_coding transcript_biotype:protein_coding)

HSP 1 Score: 96.6709 bits (239), Expect = 1.285e-25
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 2

Query:  215 FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   69 FQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 150

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Yeast
Match: OLI1 (F0-ATP synthase subunit c (ATPase-associated proteolipid); encoded on the mitochondrial genome; mutation confers oligomycin resistance; expression is specifically dependent on the nuclear genes AEP1 and AEP2 [Source:SGD;Acc:S000007274])

HSP 1 Score: 59.3066 bits (142), Expect = 1.704e-12
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 2

Query:  323 FGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            F +L+ G +RNP +K  +F  AILGFALSEA GLFCLM++FL+LF 
Sbjct:   30 FAALINGVSRNPSIKDTVFPMAILGFALSEATGLFCLMVSFLLLFG 75

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Nematostella
Match: EDO42877 (Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7S000])

HSP 1 Score: 97.8265 bits (242), Expect = 5.230e-26
Identity = 76/101 (75.25%), Postives = 81/101 (80.20%), Query Frame = 2

Query:  161 LVNNVQKLSPL-ANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            LV  V   SPL   +    F TS+   D+D AAK+IGAGAAT G AGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLMMAFLILFA
Sbjct:   34 LVKAVVPASPLLGALASRGFQTSSAVQDVDSAAKFIGAGAATVGAAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 134

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc3b (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:101163447])

HSP 1 Score: 100.908 bits (250), Expect = 1.210e-26
Identity = 75/96 (78.12%), Postives = 80/96 (83.33%), Query Frame = 2

Query:  173 VQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            V   SPL  +    F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   43 VMPQSPLTQVTLRGFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 138

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc3b (ATP synthase membrane subunit c locus 3 [Source:NCBI gene;Acc:101163447])

HSP 1 Score: 100.138 bits (248), Expect = 3.129e-26
Identity = 75/96 (78.12%), Postives = 80/96 (83.33%), Query Frame = 2

Query:  173 VQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            V   SPL  +    F TS +  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   52 VMPQSPLTQVTLRGFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 147

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: ATP5MC2 (ATP synthase F(0) complex subunit C2, mitochondrial [Source:NCBI gene;Acc:101173375])

HSP 1 Score: 97.0561 bits (240), Expect = 3.113e-25
Identity = 72/82 (87.80%), Postives = 75/82 (91.46%), Query Frame = 2

Query:  215 FHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
            F TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   59 FQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 140

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:101156015])

HSP 1 Score: 93.9745 bits (232), Expect = 4.341e-24
Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 2

Query:  218 HTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
             TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:   51 QTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 131

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Match: atp5mc1 (ATP synthase F(0) complex subunit C3, mitochondrial [Source:NCBI gene;Acc:101156015])

HSP 1 Score: 93.5893 bits (231), Expect = 4.305e-23
Identity = 71/83 (85.54%), Postives = 74/83 (89.16%), Query Frame = 2

Query:  212 KFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFA 460
               TS V  DID AAK+IGAGAAT GVAGSGAGIGTVFGSL+IGYARNP LKQQLFSYAILGFALSEAMGLFCLM+AFLILFA
Sbjct:  132 SLQTSAVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCLMVAFLILFA 214

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST
Match: SMESG000059768.1 (SMESG000059768.1)

HSP 1 Score: 157.918 bits (398), Expect = 1.765e-49
Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 2

Query:  149 MRSFLVNNVQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            MRSFLVNNVQKLSPLANIKDCKFHTSTVRNDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF
Sbjct:    1 MRSFLVNNVQKLSPLANIKDCKFHTSTVRNDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 105

[Close]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST
Match: SMESG000078181.1 (SMESG000078181.1)

HSP 1 Score: 102.834 bits (255), Expect = 7.924e-28
Identity = 81/97 (83.51%), Postives = 84/97 (86.60%), Query Frame = 2

Query:  173 VQKLSPLANIKDCKFHTSTVRNDIDQXXXXXXXXXXXXXXXXXXXXXXXXFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 463
            V K+S +  +     HTS    DIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF
Sbjct:   20 VIKVSSIPPVNSNYIHTSARICDIDQAAKYIGAGAATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGLFCLMMAFLILFAF 116

The following BLAST results are available for this feature:

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Celegans
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Yeast
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Nematostella
BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ATP5MC1	4.685e-25	86.75	ATP synthase membrane subunit c locus 1 [Source:HG...	[more]
ATP5MC1	5.286e-25	78.95	ATP synthase membrane subunit c locus 1 [Source:HG...	[more]
ATP5MC2	5.335e-25	79.35	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]
ATP5MC2	5.335e-25	79.35	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]
ATP5MC2	5.335e-25	79.35	ATP synthase membrane subunit c locus 2 [Source:HG...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99)
Total hits: 4


Match Name	E-value	Identity	Description
Y82E9BR.3	4.682e-24	68.81	ATP synthase lipid-binding protein, mitochondrial ...	[more]
Y82E9BR.3	4.682e-24	68.81	ATP synthase lipid-binding protein, mitochondrial ...	[more]
Y82E9BR.3	4.682e-24	68.81	ATP synthase lipid-binding protein, mitochondrial ...	[more]
Y82E9BR.3	4.682e-24	68.81	ATP synthase lipid-binding protein, mitochondrial ...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99)
Total hits: 5


Match Name	E-value	Identity	Description
ATPsynC	4.667e-27	78.35	gene:FBgn0039830 transcript:FBtr0085774	[more]
ATPsynC	4.667e-27	78.35	gene:FBgn0039830 transcript:FBtr0085773	[more]
ATPsynC	4.667e-27	78.35	gene:FBgn0039830 transcript:FBtr0305121	[more]
ATPsynC	4.667e-27	78.35	gene:FBgn0039830 transcript:FBtr0085772	[more]
ATPsynC	4.667e-27	78.35	gene:FBgn0039830 transcript:FBtr0306237	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc3a	8.235e-27	81.52	ATP synthase membrane subunit c locus 3a [Source:Z...	[more]
atp5mc3a	8.235e-27	81.52	ATP synthase membrane subunit c locus 3a [Source:Z...	[more]
atp5mc3b	8.354e-25	86.59	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
atp5mc3b	8.354e-25	86.59	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
atp5mc1	2.274e-24	86.59	ATP synthase membrane subunit c locus 1 [Source:ZF...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc3	3.538e-25	86.75	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc3	4.516e-25	86.75	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc3	5.185e-25	86.75	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc3	6.912e-25	86.75	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc1	6.132e-22	85.19	ATP synthase membrane subunit c locus 1 [Source:NC...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99)
Total hits: 5


Match Name	E-value	Identity	Description
Atp5g1	2.813e-25	80.43	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g1	2.813e-25	80.43	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g1	2.813e-25	80.43	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g1	2.813e-25	80.43	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]
Atp5g2	4.420e-25	80.43	ATP synthase, H+ transporting, mitochondrial F0 co...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt)
Total hits: 5


Match Name	E-value	Identity	Description
sp\|Q9U505\|AT5G_MANSE	1.123e-25	65.55	ATP synthase lipid-binding protein, mitochondrial ...	[more]
sp\|Q5RAP9\|AT5G2_PONAB	8.266e-25	79.35	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
sp\|Q9CR84\|AT5G1_MOUSE	1.968e-24	80.43	ATP synthase F(0) complex subunit C1, mitochondria...	[more]
sp\|Q06645\|AT5G1_RAT	2.410e-24	80.43	ATP synthase F(0) complex subunit C1, mitochondria...	[more]
sp\|Q06055\|AT5G2_HUMAN	2.562e-24	79.35	ATP synthase F(0) complex subunit C2, mitochondria...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0R3UFR3	2.491e-29	71.79	Uncharacterized protein OS=Mesocestoides corti OX=...	[more]
A0A5K3EK72	2.950e-29	71.79	Uncharacterized protein OS=Mesocestoides corti OX=...	[more]
A0A0R3SFT4	8.884e-29	70.34	ATP-synt_C domain-containing protein OS=Hymenolepi...	[more]
A0A183ANJ8	2.853e-28	68.64	ATP-synt_C domain-containing protein OS=Echinostom...	[more]
A0A0R3TAM1	3.489e-28	67.80	ATP-synt_C domain-containing protein OS=Rodentolep...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc3b	7.740e-27	81.52	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
atp5mc3b	1.320e-26	81.52	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
atp5mc3b	1.320e-26	81.52	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
ENSAMXT00000036927.1	1.089e-25	80.43	ATP synthase F(0) complex subunit C3, mitochondria...	[more]
ENSAMXT00000049606.1	1.224e-25	80.43	ATP synthase F(0) complex subunit C3, mitochondria...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99)
Total hits: 4


Match Name	E-value	Identity	Description
atp5mc3a	3.917e-27	79.17	ATP synthase membrane subunit c locus 3a [Source:Z...	[more]
atp5mc3b	4.349e-26	75.00	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
atp5mc3b	7.299e-26	77.08	ATP synthase membrane subunit c locus 3b [Source:Z...	[more]
ENSPMAT00000000839.1	1.285e-25	87.80	pep scaffold:Pmarinus_7.0:GL479015:51266:53309:-1 ...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46)
Total hits: 1


Match Name	E-value	Identity	Description
OLI1	1.704e-12	60.87	F0-ATP synthase subunit c (ATPase-associated prote...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46)
Total hits: 1


Match Name	E-value	Identity	Description
EDO42877	5.230e-26	75.25	Predicted protein [Source:UniProtKB/TrEMBL;Acc:A7...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99)
Total hits: 5


Match Name	E-value	Identity	Description
atp5mc3b	1.210e-26	78.13	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
atp5mc3b	3.129e-26	78.13	ATP synthase membrane subunit c locus 3 [Source:NC...	[more]
ATP5MC2	3.113e-25	87.80	ATP synthase F(0) complex subunit C2, mitochondria...	[more]
atp5mc1	4.341e-24	87.65	ATP synthase F(0) complex subunit C3, mitochondria...	[more]
atp5mc1	4.305e-23	85.54	ATP synthase F(0) complex subunit C3, mitochondria...	[more]

BLAST of Mitochondrial ATP synthase subunit 9 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST)
Total hits: 2


Match Name	E-value	Identity	Description
SMESG000059768.1	1.765e-49	100.00	SMESG000059768.1	[more]
SMESG000078181.1	7.924e-28	83.51	SMESG000078181.1	[more]

Analyses

This transcript is derived from or has results from the following analyses


Analysis Name	Date Performed
Embryonic Stages	2016-07-25
Schmidtea mediterranea smed_20140614 BLASTX Human e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99	2016-08-08
Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL	2020-05-01
Schmidtea mediterranea Sexual smed_20140614 transcriptome	2016-07-25
Schmidtea mediteranean smed_20140614 Interproscan	2020-05-01
Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99	2020-05-08
Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST	2020-05-08

Sequences

The following sequences are available for this feature:

transcript sequence
protein sequence

transcript sequence

>SMED30024106 ID=SMED30024106|Name=Mitochondrial ATP synthase subunit 9|organism=Schmidtea mediterranea sexual|type=transcript|length=702bp
AAAAAATGTTAATGTAAATAATAATTTATCGTAAAAAAATCAGTGAAACT
TAATTTTACAAGCATTATTGTTTAATTATATTAAAACATAAATTAGTTTA
TTATCAAGTTGCAAAACCAAAAATATGTCACTATGCAGATTAAATCTAAT
GCGTTCCTTCTTAGTCAACAATGTGCAAAAGTTAAGTCCTCTTGCAAATA
TTAAAGACTGTAAATTCCATACTTCAACAGTTAGAAATGATATTGATCAA
GCAGCCAAATATATTGGTGCTGGTGCAGCTACTGCCGGAGTAGCTGGATC
TGGAGCAGGTATTGGAACAGTTTTTGGAAGTCTCGTAATCGGTTACGCAA
GAAATCCAGGATTGAAACAGCAATTATTCTCTTATGCCATTTTAGGTTTT
GCGCTCAGTGAAGCTATGGGTCTATTTTGTCTTATGATGGCATTTTTGAT
ATTATTTGCCTTTTAGTATGTCTTTTAGAGTTTAGGATGTTTTATTATTG
GAATGATGAAAATAAAAAAAATAGTGTTGAGTAGTAGTTATCGATGTGAC
AAATAAATTGTTGAAATTTTCGTATTTTAATGGTTCTCGTGCTACCAATA
CTCCCTGTTTGGGTTTTTAGGAGTAAATTTTCATGAATATTTTTTTAGTT
TTGTGATATTGTGACATTTTAGCAGTATTTCTATATTTAAGTTATGAAAT
TT

protein sequence of SMED30024106-orf-1

>SMED30024106-orf-1 ID=SMED30024106-orf-1|Name=SMED30024106-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=114bp
MSLCRLNLMRSFLVNNVQKLSPLANIKDCKFHTSTVRNDIDQAAKYIGAG
AATAGVAGSGAGIGTVFGSLVIGYARNPGLKQQLFSYAILGFALSEAMGL
FCLMMAFLILFAF*

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **biological process**
Term	Definition
GO:1902600	hydrogen ion transmembrane transport
GO:0015986	ATP synthesis coupled proton transport
GO:0015991	ATP hydrolysis coupled proton transport
GO:0006810	transport
GO:0006811	ion transport
GO:0015992	proton transport

Vocabulary: **Planarian Anatomy**
Term	Definition
PLANA:0000026	gut
PLANA:0000035	Category 3 cell
PLANA:0000429	neoblast

Vocabulary: **INTERPRO**
Term	Definition
IPR038662	ATP_synth_F0_csu_sf
IPR035921	F/V-ATP_Csub_sf
IPR000454	ATP_synth_F0_csu
IPR002379	ATPase_proteolipid_c-like_dom
IPR020537	ATP_synth_F0_csu_DDCD_BS

Vocabulary: **molecular function**
Term	Definition
GO:0015078	hydrogen ion transmembrane transporter activity
GO:0008289	lipid binding

Vocabulary: **cellular component**
Term	Definition
GO:0045263	proton-transporting ATP synthase complex, coupling factor F(o)
GO:0033177	proton-transporting two-sector ATPase complex, proton-transporting domain
GO:0005739	mitochondrion
GO:0005743	mitochondrial inner membrane
GO:0005753	mitochondrial proton-transporting ATP synthase complex
GO:0016020	membrane
GO:0016021	integral component of membrane
GO:0031966	mitochondrial membrane

InterPro

Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000454	ATP synthase, F0 complex, subunit C	PRINTS	PR00124	ATPASEC	coord: 47..66 score: 53.63 coord: 85..110 score: 58.41 coord: 68..83 score: 46.32
IPR000454	ATP synthase, F0 complex, subunit C	PANTHER	PTHR10031	ATP SYNTHASE LIPID-BINDING PROTEIN, MITOCHONDRIAL	coord: 25..112
IPR038662	F1F0 ATP synthase subunit C superfamily	GENE3D	G3DSA:1.20.20.10		coord: 40..111 e-value: 1.4E-36 score: 126.3
IPR002379	V-ATPase proteolipid subunit C-like domain	PFAM	PF00137	ATP-synt_C	coord: 47..109 e-value: 2.7E-10 score: 40.4
None	No IPR available	PANTHER	PTHR10031:SF31	ATP SYNTHASE F(0) COMPLEX SUBUNIT C1, MITOCHONDRIAL	coord: 25..112
None	No IPR available	CDD	cd18182	ATP-synt_Fo_c_ATP5G3	coord: 65..109 e-value: 6.30206E-21 score: 77.1647
None	No IPR available	TMHMM	TMhelix		coord: 89..111
None	No IPR available	TMHMM	TMhelix		coord: 52..74
IPR020537	ATP synthase, F0 complex, subunit C, DCCD-binding site	PROSITE	PS00605	ATPASE_C	coord: 75..96
IPR035921	F/V-ATP synthase subunit C superfamily	SUPERFAMILY	SSF81333	F1F0 ATP synthase subunit C	coord: 40..112