SMED30024100
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Overview
Neoblast Clusters
Zeng et. al., 2018▻ Overview▻ Neoblast Population
Overview
Single cell RNA-seq of pluripotent neoblasts and its early progeniesWe isolated X1 neoblasts cells enriched in high piwi-1 expression (Neoblast Population), and profiled ∼7,614 individual cells via scRNA-seq. Unsupervised analyses uncovered 12 distinct classes from 7,088 high-quality cells. We designated these classes Nb1 to Nb12 and ordered them based on high (Nb1) to low (Nb12) piwi-1 expression levels. We further defined groups of genes that best classified the cells parsed into 12 distinct cell clusters to generate a scaled expression heat map of discriminative gene sets for each cluster. Expression of each cluster’s gene signatures was validated using multiplex fluorescence in situ hybridization (FISH) co-stained with piwi-1 and largely confirmed the cell clusters revealed by scRNA-seq.We also tested sub-lethal irradiation exposure. To profile rare pluripotent stem cells (PSCs) and avoid interference from immediate progenitor cells, we determined a time point after sub-lethal irradiation (7 DPI) with minimal piwi-1+ cells, followed by isolation and single-cell RNA-seq of 1,200 individual cells derived from X1 (Piwi-1 high) and X2 (Piwi-1 low) cell populations (Sub-lethal Irradiated Surviving X1 and X2 Cell Population)Explore this single cell expression dataset with our NB Cluster Shiny App
Neoblast Population
Embryonic Expression
Davies et. al., 2017
Hover the mouse over a column in the graph to view average RPKM values per sample. Embryonic Stages: Y: yolk. S2-S8: Stages 2-8. C4: asexual adult. SX: virgin, sexually mature adult. back to top Anatomical Expression
PAGE et. al., 2020SMED30024100 has been reported as being expressed in these anatomical structures and/or regions. Read more about PAGEPAGE Curations: 6
Alignments
SMED30024100 aligns in the following genomic locations:
Homology
BLAST of SMED30024100 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 126.331 bits (316), Expect = 6.327e-34 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC
Sbjct: 1062 LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC 1198 HSP 2 Score: 103.219 bits (256), Expect = 8.222e-26 Identity = 80/133 (60.15%), Postives = 93/133 (69.92%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1150 ICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1282 HSP 3 Score: 95.5153 bits (236), Expect = 3.303e-23 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
CP MKDLC NP VA MCKKTCGS+T S ST S+ +STPISTEP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 313 CPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 4 Score: 93.9745 bits (232), Expect = 1.204e-22 Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+C NP++A +CKKTC SST S ST SS+SSTP STEPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLC
Sbjct: 968 VCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLC 1110 HSP 5 Score: 91.6633 bits (226), Expect = 9.397e-22 Identity = 91/143 (63.64%), Postives = 113/143 (79.02%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+CTNP+VA +CKKTC ST+ S+ SSISST ISTEPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLC
Sbjct: 921 VCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLC 1063 HSP 6 Score: 89.7373 bits (221), Expect = 4.150e-21 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX-----XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+S ST SSISST ISTEPT+CP MKD+C NP+V+ +CK TCASST+ S + TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 773 VCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 888 HSP 7 Score: 87.8113 bits (216), Expect = 1.601e-20 Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SST +STEPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 679 VCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCA 795 HSP 8 Score: 87.4261 bits (215), Expect = 2.471e-20 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAX--------------XXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCP +KDLC NP+V+ +CKKTCGSST++ S SSI+S P+STEPT+CP MKD+C NP+V+ +CKKTCA STS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTC
Sbjct: 359 LCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCG 483 HSP 9 Score: 81.6481 bits (200), Expect = 2.268e-18 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SSISSTPI+ EPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 820 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPIT-EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 943 HSP 10 Score: 81.2629 bits (199), Expect = 3.116e-18 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXX--------XXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTCGSST+ ST SS SST STEPT+CP MKD+C NP+V+ +CK TCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 461 VCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 592 HSP 11 Score: 80.4925 bits (197), Expect = 6.057e-18 Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXX--------XXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SS TPISTEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 570 VCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 701 HSP 12 Score: 78.9518 bits (193), Expect = 2.200e-17 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXX-------XEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXX--------------XXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S TEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S T +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 516 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 647 HSP 13 Score: 77.0258 bits (188), Expect = 8.714e-17 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+C+ V+ +CKKTCGSSTS+ ST I++IS+TP+STEP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 97 ICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 14 Score: 75.8702 bits (185), Expect = 2.712e-16 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
CP MKD+C +V+++CKKTC ST +SS S TPISTEPT CP MKDLC+NP V+ +CKKTC S+T + S +S +STEP++CP +KDLC NP+VS +CKKTC SSTT KSS +A+S +S P STEPT+C
Sbjct: 272 CPLMKDICHLQSVSIICKKTCA------SSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVC 407 HSP 15 Score: 67.781 bits (164), Expect = 1.509e-13 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCG 334 HSP 16 Score: 67.0106 bits (162), Expect = 2.710e-13 Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX------XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
C M +C NP V+ +C KTC S+T ++ + EPT+CP MKD+C VS +CKKTC SSTS S +S STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 61 CAFMTQICHNPGVSQICPKTCASNTFTSTESPT----------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 17 Score: 53.5286 bits (127), Expect = 1.450e-8 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCG 119
BLAST of SMED30024100 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 126.331 bits (316), Expect = 6.327e-34 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC
Sbjct: 1063 LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC 1199 HSP 2 Score: 103.219 bits (256), Expect = 8.223e-26 Identity = 80/133 (60.15%), Postives = 93/133 (69.92%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1151 ICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1283 HSP 3 Score: 95.5153 bits (236), Expect = 3.367e-23 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
CP MKDLC NP VA MCKKTCGS+T S ST S+ +STPISTEP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 313 CPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 4 Score: 93.9745 bits (232), Expect = 1.215e-22 Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+C NP++A +CKKTC SST S ST SS+SSTP STEPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLC
Sbjct: 969 VCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLC 1111 HSP 5 Score: 91.2781 bits (225), Expect = 9.581e-22 Identity = 91/143 (63.64%), Postives = 113/143 (79.02%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+CTNP+VA +CKKTC ST+ S+ SSISST ISTEPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLC
Sbjct: 922 VCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLC 1064 HSP 6 Score: 89.7373 bits (221), Expect = 4.232e-21 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX-----XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+S ST SSISST ISTEPT+CP MKD+C NP+V+ +CK TCASST+ S + TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 774 VCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 889 HSP 7 Score: 87.8113 bits (216), Expect = 1.632e-20 Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SST +STEPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 680 VCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCA 796 HSP 8 Score: 87.4261 bits (215), Expect = 2.519e-20 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAX--------------XXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCP +KDLC NP+V+ +CKKTCGSST++ S SSI+S P+STEPT+CP MKD+C NP+V+ +CKKTCA STS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTC
Sbjct: 359 LCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCG 483 HSP 9 Score: 81.6481 bits (200), Expect = 2.312e-18 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SSISSTPI+ EPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 821 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPIT-EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 944 HSP 10 Score: 81.2629 bits (199), Expect = 3.177e-18 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXX--------XXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTCGSST+ ST SS SST STEPT+CP MKD+C NP+V+ +CK TCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 461 VCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 592 HSP 11 Score: 79.7221 bits (195), Expect = 1.029e-17 Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXX--------XXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SS TPISTEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 570 VCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 702 HSP 12 Score: 78.9518 bits (193), Expect = 2.243e-17 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXX-------XEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXX--------------XXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S TEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S T +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 516 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 647 HSP 13 Score: 77.0258 bits (188), Expect = 8.548e-17 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+C+ V+ +CKKTCGSSTS+ ST I++IS+TP+STEP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 97 ICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 14 Score: 75.8702 bits (185), Expect = 2.712e-16 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
CP MKD+C +V+++CKKTC ST +SS S TPISTEPT CP MKDLC+NP V+ +CKKTC S+T + S +S +STEP++CP +KDLC NP+VS +CKKTC SSTT KSS +A+S +S P STEPT+C
Sbjct: 272 CPLMKDICHLQSVSIICKKTCA------SSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVC 407 HSP 15 Score: 67.781 bits (164), Expect = 1.524e-13 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCG 334 HSP 16 Score: 67.0106 bits (162), Expect = 2.633e-13 Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX------XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
C M +C NP V+ +C KTC S+T ++ + EPT+CP MKD+C VS +CKKTC SSTS S +S STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 61 CAFMTQICHNPGVSQICPKTCASNTFTSTESPT----------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 17 Score: 53.5286 bits (127), Expect = 1.450e-8 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCG 119
BLAST of SMED30024100 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 126.331 bits (316), Expect = 7.049e-34 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC
Sbjct: 1061 LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC 1197 HSP 2 Score: 104.76 bits (260), Expect = 2.439e-26 Identity = 81/112 (72.32%), Postives = 93/112 (83.04%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXX-XXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCPAMKDLCTNPAV++MCKKTC S+T+ S S S+ +STEPTLCP MK LC NP V+ +CKKTCASSTS SS+SST +STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1196 LCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTEPTLCPDMKMLCNNPNVAKMCKKTCASSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1307 HSP 3 Score: 95.5153 bits (236), Expect = 3.679e-23 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
CP MKDLC NP VA MCKKTCGS+T S ST S+ +STPISTEP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 313 CPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 4 Score: 93.9745 bits (232), Expect = 1.183e-22 Identity = 88/142 (61.97%), Postives = 109/142 (76.76%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+C NP++A +CKKTC SST S ST SS+SSTP STEPT+CP MKD+C NP+V+ +CKKTC+++T SS + + STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLC
Sbjct: 968 VCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLC 1109 HSP 5 Score: 89.7373 bits (221), Expect = 4.078e-21 Identity = 74/117 (63.25%), Postives = 94/117 (80.34%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC ST+ S+ SSISST ISTEPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC+
Sbjct: 921 VCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCS 1037 HSP 6 Score: 89.3521 bits (220), Expect = 4.623e-21 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX-----XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+S ST SSISST ISTEPT+CP MKD+C NP+V+ +CK TCASST+ S + TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 773 VCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 888 HSP 7 Score: 87.8113 bits (216), Expect = 1.800e-20 Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SST +STEPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 679 VCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCA 795 HSP 8 Score: 87.0409 bits (214), Expect = 2.832e-20 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAX--------------XXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCP +KDLC NP+V+ +CKKTCGSST++ S SSI+S P+STEPT+CP MKD+C NP+V+ +CKKTCA STS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTC
Sbjct: 359 LCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCG 483 HSP 9 Score: 81.6481 bits (200), Expect = 2.525e-18 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SSISSTPI+ EPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 820 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPIT-EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 943 HSP 10 Score: 81.2629 bits (199), Expect = 3.504e-18 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXX--------XXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTCGSST+ ST SS SST STEPT+CP MKD+C NP+V+ +CK TCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 461 VCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 592 HSP 11 Score: 80.4925 bits (197), Expect = 6.810e-18 Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXX--------XXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SS TPISTEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 570 VCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 701 HSP 12 Score: 78.9518 bits (193), Expect = 2.450e-17 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXX-------XEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXX--------------XXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S TEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S T +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 516 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 647 HSP 13 Score: 77.0258 bits (188), Expect = 9.609e-17 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+C+ V+ +CKKTCGSSTS+ ST I++IS+TP+STEP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 97 ICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 14 Score: 75.485 bits (184), Expect = 3.048e-16 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
CP MKD+C +V+++CKKTC ST +SS S TPISTEPT CP MKDLC+NP V+ +CKKTC S+T + S +S +STEP++CP +KDLC NP+VS +CKKTC SSTT KSS +A+S +S P STEPT+C
Sbjct: 272 CPLMKDICHLQSVSIICKKTCA------SSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVC 407 HSP 15 Score: 67.781 bits (164), Expect = 1.586e-13 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCG 334 HSP 16 Score: 67.0106 bits (162), Expect = 2.902e-13 Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX------XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
C M +C NP V+ +C KTC S+T ++ + EPT+CP MKD+C VS +CKKTC SSTS S +S STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 61 CAFMTQICHNPGVSQICPKTCASNTFTSTESPT----------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 17 Score: 53.1434 bits (126), Expect = 1.553e-8 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCG 119
BLAST of SMED30024100 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 126.331 bits (316), Expect = 7.117e-34 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC
Sbjct: 1061 LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC 1197 HSP 2 Score: 104.76 bits (260), Expect = 2.486e-26 Identity = 81/112 (72.32%), Postives = 93/112 (83.04%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXX-XXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCPAMKDLCTNPAV++MCKKTC S+T+ S S S+ +STEPTLCP MK LC NP V+ +CKKTCASSTS SS+SST +STEPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1196 LCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTEPTLCPDMKMLCNNPNVAKMCKKTCASSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1307 HSP 3 Score: 95.5153 bits (236), Expect = 3.715e-23 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
CP MKDLC NP VA MCKKTCGS+T S ST S+ +STPISTEP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 313 CPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 428 HSP 4 Score: 93.9745 bits (232), Expect = 1.354e-22 Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+C NP++A +CKKTC SST S ST SS+SSTP STEPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLC
Sbjct: 967 VCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLC 1109 HSP 5 Score: 91.2781 bits (225), Expect = 1.088e-21 Identity = 91/143 (63.64%), Postives = 113/143 (79.02%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+CTNP+VA +CKKTC ST+ S+ SSISST ISTEPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLC
Sbjct: 920 VCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLC 1062 HSP 6 Score: 89.3521 bits (220), Expect = 4.667e-21 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX-----XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+S ST SSISST ISTEPT+CP MKD+C NP+V+ +CK TCASST+ S + TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 772 VCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 887 HSP 7 Score: 87.8113 bits (216), Expect = 1.667e-20 Identity = 67/124 (54.03%), Postives = 89/124 (71.77%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAX-------------XXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCP +KDLC NP+V+ +CKKTCGSST++ S SSI+S P+STEPT+CP MKD+C NP+V+ +CKKTCA S+++ S S+ TEPT+CP MKD+CTNP+V+ +CKKTC
Sbjct: 359 LCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCG 482 HSP 8 Score: 87.8113 bits (216), Expect = 1.818e-20 Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SST +STEPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 678 VCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCA 794 HSP 9 Score: 81.6481 bits (200), Expect = 2.550e-18 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SSISSTPI+ EPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 819 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPIT-EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 942 HSP 10 Score: 81.2629 bits (199), Expect = 3.504e-18 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXX--------XXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTCGSST+ ST SS SST STEPT+CP MKD+C NP+V+ +CK TCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 460 VCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 591 HSP 11 Score: 80.4925 bits (197), Expect = 6.876e-18 Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXX--------XXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SS TPISTEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 569 VCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 700 HSP 12 Score: 78.9518 bits (193), Expect = 2.474e-17 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXX-------XEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXX--------------XXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S TEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S T +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 515 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 646 HSP 13 Score: 77.0258 bits (188), Expect = 9.609e-17 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+C+ V+ +CKKTCGSSTS+ ST I++IS+TP+STEP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 97 ICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 212 HSP 14 Score: 75.485 bits (184), Expect = 3.019e-16 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
CP MKD+C +V+++CKKTC ST +SS S TPISTEPT CP MKDLC+NP V+ +CKKTC S+T + S +S +STEP++CP +KDLC NP+VS +CKKTC SSTT KSS +A+S +S P STEPT+C
Sbjct: 272 CPLMKDICHLQSVSIICKKTCA------SSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVC 407 HSP 15 Score: 67.781 bits (164), Expect = 1.586e-13 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC
Sbjct: 268 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCG 334 HSP 16 Score: 67.0106 bits (162), Expect = 2.959e-13 Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX------XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
C M +C NP V+ +C KTC S+T ++ + EPT+CP MKD+C VS +CKKTC SSTS S +S STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 61 CAFMTQICHNPGVSQICPKTCASNTFTSTESPT----------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 166 HSP 17 Score: 53.1434 bits (126), Expect = 1.538e-8 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC
Sbjct: 57 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCG 119
BLAST of SMED30024100 vs. Planmine SMEST
Match: SMESG000066354.1 (SMESG000066354.1) HSP 1 Score: 126.331 bits (316), Expect = 7.176e-34 Identity = 136/137 (99.27%), Postives = 136/137 (99.27%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICP MKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC
Sbjct: 1066 LCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLCPQMKDLCMNPAVSLICKKTCASSTSASSLSSTIMSTEPTICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLC 1202 HSP 2 Score: 103.219 bits (256), Expect = 8.885e-26 Identity = 80/133 (60.15%), Postives = 93/133 (69.92%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX----------------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLCP MKDLC NPAVS++CKKTCAS+T+ S +S+ S EPT+CPAMKDLCTNPAVS+MCKKTCA
Sbjct: 1154 ICPTMKDLCTNPAVSVMCKKTCASSTTLKSSSTATSQSSVPTSTEPTLCPAMKDLCTNPAVSIMCKKTCASTTTGISSASSGSSKSSTPLSTSSTSGSSVSSTPVSTEPTLCPAMKDLCTNPAVSIMCKKTCA 1286 HSP 3 Score: 95.5153 bits (236), Expect = 3.569e-23 Identity = 75/116 (64.66%), Postives = 91/116 (78.45%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
CP MKDLC NP VA MCKKTCGS+T S ST S+ +STPISTEP+LCP++KDLC+NP+VS +CKKTC SST+A S S +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 316 CPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCA 431 HSP 4 Score: 93.9745 bits (232), Expect = 1.251e-22 Identity = 88/143 (61.54%), Postives = 108/143 (75.52%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+C NP++A +CKKTC SST S ST SS+SSTP STEPT+CP MKD+C NP+V+ +CKKTC S+T+ S ++ STEPT+CPAMKDLCTNPAV+VMCKKTC SST+ S+ +S SS P STEPTLC
Sbjct: 972 VCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCKKTCGSSTSSTLSTFISSISSTPISTEPTLC 1114 HSP 5 Score: 91.2781 bits (225), Expect = 9.864e-22 Identity = 91/143 (63.64%), Postives = 113/143 (79.02%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCA------XXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
+CP MKD+CTNP+VA +CKKTC ST+ S+ SSISST ISTEPT+CP MKD+C+NP+++ +CKKTCA SSTS SS+SST STEPT+CP MKD+CTNP+V+ +CKKTC S+TT KSS+ +S SS P STEPTLC
Sbjct: 925 VCPDMKDMCTNPSVAKLCKKTCAFSTTPKSSSRGSSISSTQISTEPTVCPDMKDMCINPSIAKLCKKTCASSTKSKSSTSGSSVSSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCGSTTTGKSSTNVSSVSSTPKSTEPTLC 1067 HSP 6 Score: 89.7373 bits (221), Expect = 4.399e-21 Identity = 72/116 (62.07%), Postives = 89/116 (76.72%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX-----XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+S ST SSISST ISTEPT+CP MKD+C NP+V+ +CK TCASST+ S + TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 777 VCPDMKDMCTNPSVAKLCKKTCASSTTSKSSTSGSSISSTQISTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 892 HSP 7 Score: 87.8113 bits (216), Expect = 1.681e-20 Identity = 68/117 (58.12%), Postives = 89/117 (76.07%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SST +STEPT+CP MK++C NP+V+ +CKKTCAS+T+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 683 VCPDMKDMCTNPSVAKLCKKTCASSTTQESSTSGSSKSSTSMSTEPTVCPDMKEMCTNPSVAKLCKKTCASTTTPKSSTSGSSISSTPTSTEPTVCPDMKDMCTNPSVAKLCKKTCA 799 HSP 8 Score: 87.4261 bits (215), Expect = 2.569e-20 Identity = 73/125 (58.40%), Postives = 93/125 (74.40%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAX--------------XXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
LCP +KDLC NP+V+ +CKKTCGSST++ S SSI+S P+STEPT+CP MKD+C NP+V+ +CKKTCA STS SS+SST +STEPT+CP MKD+CTNP+V+ +CKKTC
Sbjct: 362 LCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVCPDMKDMCTNPSVAKLCKKTCAFPTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCG 486 HSP 9 Score: 81.6481 bits (200), Expect = 2.403e-18 Identity = 70/125 (56.00%), Postives = 89/125 (71.20%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SSISSTPI+ EPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 824 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTKGSSISSTPIT-EPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 947 HSP 10 Score: 81.2629 bits (199), Expect = 3.271e-18 Identity = 71/132 (53.79%), Postives = 88/132 (66.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXX--------XXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXX-------------XEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTCGSST+ ST SS SST STEPT+CP MKD+C NP+V+ +CK TCASST+ S +S TEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 464 VCPDMKDMCTNPSVAKLCKKTCGSSTTPRSSTSGSSKSSTSGSSISSKPMSTEPTVCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCA 595 HSP 11 Score: 79.7221 bits (195), Expect = 1.069e-17 Identity = 72/133 (54.14%), Postives = 90/133 (67.67%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXX--------XXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXX--------------EPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CKKTC SST+ ST SS SS TPISTEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S + EPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 573 VCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGSSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 705 HSP 12 Score: 78.9518 bits (193), Expect = 2.332e-17 Identity = 72/132 (54.55%), Postives = 90/132 (68.18%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXX-------XEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXX--------------XXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+CTNP+VA +CK TC SST+ ST SS SST S TEPT+CP MKD+C NP+V+ +CKKTCASST+ S +S T +STEPT+CP MKD+CTNP+V+ +CKKTCA
Sbjct: 519 VCPDMKDMCTNPSVAKLCKNTCASSTTPKSSTSESSKSSTSGSSISSTPITEPTVCPDMKDMCTNPSVAKLCKKTCASSTTPKSSTSGSSKSSTSGPSISSTPISTEPTVCPDMKDMCTNPSVAKLCKKTCA 650 HSP 13 Score: 77.0258 bits (188), Expect = 9.323e-17 Identity = 63/116 (54.31%), Postives = 87/116 (75.00%), Query Frame = 3
Query: 99 LCPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX-----XXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
+CP MKD+C+ V+ +CKKTCGSSTS+ ST I++IS+TP+STEP++CP MKD+C P +S++CKKTCA+S+ S S+ + TEPT CP MK+ C+NP V++MCKKTC
Sbjct: 100 ICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCATSSIGKSSSTFSISTTPIFTEPTQCPDMKNYCSNPGVALMCKKTCG 215 HSP 14 Score: 75.485 bits (184), Expect = 2.929e-16 Identity = 80/142 (56.34%), Postives = 102/142 (71.83%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXX------XXXEPTICPAMKDLCTNPAVSVMCKKTCAXXXXXXXXXXXXXXXXXXXXXEPTLC 509
CP MKD+C +V+++CKKTC ST +SS S TPISTEPT CP MKDLC+NP V+ +CKKTC S+T + S +S +STEP++CP +KDLC NP+VS +CKKTC SSTT KSS +A+S +S P STEPT+C
Sbjct: 275 CPLMKDICHLQSVSIICKKTCA------SSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCGSTTPSKSSTSGSTATSTPISTEPSLCPKLKDLCLNPSVSGVCKKTCGSSTTAKSSVSASSITSKPVSTEPTVC 410 HSP 15 Score: 67.781 bits (164), Expect = 1.554e-13 Identity = 46/67 (68.66%), Postives = 51/67 (76.12%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EPT CP MKD+C +VS+ICKKTCASST SS S T +STEPT CP MKDLC NP V+ MCKKTC
Sbjct: 271 EPTQCPLMKDICHLQSVSIICKKTCASSTPMSSKSPTPISTEPTQCPNMKDLCINPTVASMCKKTCG 337 HSP 16 Score: 67.0106 bits (162), Expect = 2.789e-13 Identity = 55/116 (47.41%), Postives = 70/116 (60.34%), Query Frame = 3
Query: 102 CPAMKDLCTNPAVAVMCKKTCGXXXXXXXXXXXXXXXXXXXXXEPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXX------XXEPTICPAMKDLCTNPAVSVMCKKTCA 431
C M +C NP V+ +C KTC S+T ++ + EPT+CP MKD+C VS +CKKTC SSTS S +S STEP++CPAMKD+C P +SVMCKKTCA
Sbjct: 64 CAFMTQICHNPGVSQICPKTCASNTFTSTESPT----------EPTICPLMKDICSLETVSSLCKKTCGSSTSTKSSTSITTISTTPLSTEPSVCPAMKDICNLPTISVMCKKTCA 169 HSP 17 Score: 53.5286 bits (127), Expect = 1.479e-8 Identity = 35/67 (52.24%), Postives = 43/67 (64.18%), Query Frame = 3
Query: 231 EPTLCPQMKDLCMNPAVSLICKKTCAXXXXXXXXXXXXXXXEPTICPAMKDLCTNPAVSVMCKKTCA 431
EP C M +C NP VS IC KTCA +++ +ST TEPTICP MKD+C+ VS +CKKTC
Sbjct: 60 EPAQCAFMTQICHNPGVSQICPKTCA----SNTFTSTESPTEPTICPLMKDICSLETVSSLCKKTCG 122 The following BLAST results are available for this feature:
BLAST of SMED30024100 vs. Ensembl Human
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Human e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Celegans
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Celegan e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Fly
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Drosophila e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Zebrafish
Analysis Date: 2016-08-08 (Schmidtea mediterranea smed_20140614 BLASTX Zebrafish e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Xenopus
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Xenopus e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Mouse
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX Mouse e!99) Total hits: 0
BLAST of SMED30024100 vs. UniProt/SwissProt
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI UniProt) Total hits: 0
BLAST of SMED30024100 vs. TrEMBL
Analysis Date: 2020-05-01 (Schmidtea mediterranea smed_20140614 BLASTX EMBL-EBI TrEMBL) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Cavefish
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Cavefish e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Sea Lamprey
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Sea Lamprey e!99) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Yeast
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Yeast e!Fungi46) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Nematostella
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Nematostella e!Metazoa46) Total hits: 0
BLAST of SMED30024100 vs. Ensembl Medaka
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Medaka e!99) Total hits: 0
BLAST of SMED30024100 vs. Planmine SMEST
Analysis Date: 2020-05-08 (Schmidtea mediterranea smed_20140614 BLASTX Planmine SMEST) Total hits: 5
Analyses
This transcript is derived from or has results from the following analyses Sequences
The following sequences are available for this feature:
transcript sequence >SMED30024100 ID=SMED30024100|Name=SMED30024100|organism=Schmidtea mediterranea sexual|type=transcript|length=509bpback to top protein sequence of SMED30024100-orf-1 >SMED30024100-orf-1 ID=SMED30024100-orf-1|Name=SMED30024100-orf-1|organism=Schmidtea mediterranea sexual|type=polypeptide|length=169bp KLCKKTCGSTTTGKSSTSVSSVSSTPKSTEPTLCPAMKDLCTNPAVAVMCback to top Annotated Terms
The following terms have been associated with this transcript:
InterPro
Analysis Name: Schmidtea mediteranean smed_20140614 Interproscan
Date Performed: 2020-05-01
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